cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1038/s41598-019-48611-5

Soil acidification in continuously cropped tobacco alters bacterial community structure and diversity via the accumulation of phenolic acids
Cited by: 40
Author(s): Yuxiang Bai, Ge Wang, Ya-Dong Cheng, Puyou Shi, Chengcui Yang, Heng Yang, Zhaoli Xu
Software Mentions: 3
Published: almost 7 years ago

10.7554/eLife.32341

CATaDa reveals global remodelling of chromatin accessibility during stem cell differentiation in vivo
Cited by: 60
Author(s): Gabriel Aughey, Alicia Estacio-Gómez, Jamie Thomson, Hang Yin, Tony D. Southall
Software Mentions: 3
Published: over 8 years ago

10.1186/s12974-017-0906-6

A systems pharmacology-based approach to identify novel Kv1.3 channel-dependent mechanisms in microglial activation
Cited by: 49
Author(s): Srikant Rangaraju, Syed Ali Raza, Andrea Pennati, Qiudong Deng, Eric B. Dammer, Duc M. Duong, Michael W. Pennington, Malú G. Tansey, James J. Lah, Ranjita Betarbet, Nicholas T. Seyfried, Aĺlan I. Levey
Software Mentions: 3
Published: about 9 years ago

10.1007/s11356-018-1626-x

Factors determining the occurrence of anthropogenic materials in nests of the white stork Ciconia ciconia
Cited by: 41
Author(s): Zuzanna Jagiełło, Łukasz Dylewski, Dominika Winiarska, Katarzyna M. Żołnierowicz, Marcin Tobółka
Software Mentions: 3
Published: over 8 years ago

10.3389/fonc.2021.621806

Mining of RNA Methylation-Related Genes and Elucidation of Their Molecular Biology in Gallbladder Carcinoma
Cited by: 8
Author(s): Chengliang Yang, Jialei Chen, Zhe Yu, Jing Luo, Xuemei Li, Baoyong Zhou, Ning Jiang
Software Mentions: 3
Published: over 5 years ago

10.3390/nu12072164

Mediterranean Diet, Physical Activity and Gut Microbiome Composition: A Cross-Sectional Study among Healthy Young Italian Adults
Cited by: 29
Author(s): Francesca Gallè, Federica Valeriani, Maria Sofia Cattaruzza, Gianluca Gianfranceschi, Renato Liguori, Martina Antinozzi, Beatriz Mederer, Giorgio Liguori, Vincenzo Romano Spica
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-018-20783-6

The impact of reconstructed soils following oil sands exploitation on aspen and its associated belowground microbiome
Cited by: 12
Author(s): Franck Stefani, Nathalie Isabel, Marie-Josée Morency, Manuel Lamothe, Simon Nadeau, Denis Lachance, Edith H.Y. Li, Charles W. Greer, Étienne Yergeau, Bradley D. Pinno, Armand Séguin
Software Mentions: 3
Published: over 8 years ago

10.1264/jsme2.ME21031

Simple In-liquid Staining of Microbial Cells for Flow Cytometry Quantification of the Microbial Population in Marine Subseafloor Sediments
Cited by: 2
Author(s): Fumiaki Mori, Tomoya Nishimura, Taisuke Wakamatsu, T. Terada, Yuki Morono
Software Mentions: 3
Published: over 5 years ago

10.1186/s12903-021-01719-5

Core of the saliva microbiome: an analysis of the MG-RAST data
Cited by: 8
Author(s): Simone Santos Oliveira, Rafaela Rie Nishiyama, Claudio A C Trigo, Ana Luíza Mattos‐Guaraldi, Alberto M. R. Dávila, Rodrigo Desessards Jardim, Flávio Henrique Baggio Aguiar
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-48841-7

Small Animal Video Tracking for Activity and Path Analysis Using a Novel Open-Source Multi-Platform Application (AnimApp)
Cited by: 18
Author(s): S. Madhusudana Rao, Sam W. Z. Olechnowicz, Patrick Krätschmer, James E.C. Jepson, Claire M. Edwards, James Edwards
Software Mentions: 3
Published: almost 7 years ago

10.3389/fmicb.2020.01579

Contribution of Viral Genomic Diversity to Oyster Susceptibility in the Pacific Oyster Mortality Syndrome
Cited by: 12
Author(s): Jean Delmotte, Cristian Chaparro, Richard Galinier, Julien de Lorgeril, Bruno Petton, Pierre‐Louis Stenger, Jérémie Vidal-Dupiol, D. Destoumieux-Garzón, Yannick Gueguen, Caroline Montagnani, Jean-Michel Escoubas, Guillaume Mitta
Software Mentions: 3
Published: about 6 years ago

10.7554/eLife.46497

Single-amino acid variants reveal evolutionary processes that shape the biogeography of a global SAR11 subclade
Cited by: 80
Author(s): Tom O. Delmont, Evan Kiefl, Ozsel Kilinc, Özcan C. Esen, Ismail Uysal, Michael S. Rappé, Steven Giovannoni, A. Murat Eren
Software Mentions: 3
Published: almost 7 years ago

10.1186/s12934-019-1265-z

Improved utilization of soybean meal through fermentation with commensal Shewanella sp. MR-7 in turbot (Scophthalmus maximus L.)
Cited by: 31
Author(s): Chaoqun Li, Beili Zhang, Xin Wang, Xionge Pi, X Wang, Huihui Zhou, Kangsen Mai, Gang He
Software Mentions: 3
Published: over 6 years ago

10.1111/1751-7915.13693

Effects of growth‐promoting rhizobacteria on maize growth and rhizosphere microbial community under conservation tillage in Northeast China
Cited by: 38
Author(s): La Chen, Zhanhong Hao, Keke Li, Ye Sha, En Tao Wang, Xinhua Sui, Guohua Mi, Chang Fu Tian, Wenxin Chen
Software Mentions: 3
Published: almost 6 years ago

10.1016/j.mex.2019.09.013

Low-cost automatic temperature monitoring system with alerts for laboratory rearing units
Cited by: 3
Author(s): François Rebaudo, Romain Benoist
Software Mentions: 3
Published: over 7 years ago

10.7554/eLife.58435

Light-induced engagement of microglia to focally remodel synapses in the adult brain
Cited by: 20
Author(s): Carla Cangalaya, Stoyan Stoyanov, Klaus–Dieter Fischer, Alexander Dityatev
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-019-48771-4

Pheno-seq – linking visual features and gene expression in 3D cell culture systems
Cited by: 17
Author(s): Stephan M. Tirier, Jeongbin Park, Friedrich Preußer, Lisa Amrhein, Zuguang Gu, Simon Steiger, Jan‐Philipp Mallm, Teresa G Krieger, Marcel Waschow, Björn Eismann, Marta Gut, Karsten Rippe, Matthias Schlesner, Fabian J. Theis, Christiane Fuchs, Claudia R. Ball, Hanno Glimm, Roland Eils, Christian Conrad
Software Mentions: 3
Published: almost 7 years ago

10.3389/fonc.2021.690298

Effects of Inflammation on the Immune Microenvironment in Gastric Cancer
Cited by: 10
Author(s): Wenjie Zhao, Mingqing Liu, Mingyue Zhang, Yachen Wang, Yingli Zhang, Shiji Wang, Nan Zhang
Software Mentions: 3
Published: about 5 years ago

10.3389/fonc.2020.606765

KIF21B Expression in Osteosarcoma and Its Regulatory Effect on Osteosarcoma Cell Proliferation and Apoptosis Through the PI3K/AKT Pathway
Cited by: 7
Author(s): Songjia Ni, Jianjun Li, Sujun Qiu, Yingming Xie, Kaiqin Gong, Yang Duan
Software Mentions: 3
Published: over 5 years ago

10.1017/S2045796021000020

The role of ageing in the wish to be dead: disentangling age, period and cohort effects in suicide ideation in European population
Cited by: 1
Author(s): María Cabello, Laura Alejandra Rico-Uribe, José Carlos Martínez-Ávila, Albert Sánchez-Niubò, F.F. Caballero, Guilherme Borges, Blanca Mellor-Marsá, Josep María Haro, Matthew Prina, Seppo Koskinen, José Luís Ayuso-Mateos
Software Mentions: 3
Published: over 5 years ago

10.1017/S2045796019000568

Perceived need and barriers to adolescent mental health care: agreement between adolescents and their parents
Cited by: 18
Author(s): Nina Schnyder, David Lawrence, Radoslaw Panczak, Michael Sawyer, Harvey Whiteford, Philip Burgess, Meredith Harris
Software Mentions: 3
Published: almost 7 years ago

10.3389/fmicb.2020.00082

Comparative Genomic Analysis of a Novel Strain of Taiwan Hot-Spring Cyanobacterium Thermosynechococcus sp. CL-1
Cited by: 25
Author(s): Yen I. Cheng, Li-Dek Chou, Yi Fang Chiu, Hsin Ta Hsueh, Chih Horng Kuo, Hsiu-An Chu
Software Mentions: 3
Published: over 6 years ago

10.1007/s11306-020-01653-7

Metabolomics analyses in non-diabetic middle-aged individuals reveal metabolites impacting early glucose disturbances and insulin sensitivity
Cited by: 8
Author(s): Maxime M. Bos, Raymond Noordam, Kate Bennett, Marian Beekman, Dennis O. Mook‐Kanamori, Ko Willems van Dijk, P. Eline Slagboom, Torbjörn Lundstedt, Izabella Surowiec, Diana van Heemst
Software Mentions: 3
Published: over 6 years ago

10.1080/15592294.2019.1700003

Correlation of Infinium HumanMethylation450K and MethylationEPIC BeadChip arrays in cartilage
Cited by: 8
Author(s): Kathleen Cheung, M. J. Burgers, David A. Young, Simon Cockell, Louise N. Reynard
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-018-20593-w

Genetic relatedness reveals total population size of white sharks in eastern Australia and New Zealand
Cited by: 85
Author(s): Richard Hillary, Mark V. Bravington, Toby A. Patterson, Peter M. Grewe, R. Bradford, Pierre Feutry, Rasanthi M. Gunasekera, Victor M. Peddemors, Jonathan M. Werry, Malcolm P. Francis, Clinton Duffy, Barry D. Bruce
Software Mentions: 3
Published: over 8 years ago

10.3390/ani11030588

A Comparative Perspective on Three Primate Species’ Responses to a Pictorial Emotional Stroop Task
Cited by: 13
Author(s): Lydia M. Hopper, Matthias Allritz, Crystal L. Egelkamp, Sarah M. Huskisson, Sarah L. Jacobson, Jesse G. Leinwand, Stephen R. Ross
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.65427

Ciliary neuropeptidergic signaling dynamically regulates excitatory synapses in postnatal neocortical pyramidal neurons
Cited by: 15
Author(s): Lauren Tereshko, Ya Gao, Brian A Cary, Gina G. Turrigiano, Piali Sengupta
Software Mentions: 3
Published: over 5 years ago

10.1186/s13072-021-00397-5

Dynamics of cattle sperm sncRNAs during maturation, from testis to ejaculated sperm
Cited by: 21
Author(s): Eli Sellem, Sylvain Marthey, Andrea Rau, Luc Jouneau, A. Bonnet, Chrystelle Le Danvic, Benoît Guyonnet, Hélène Kiefer, Hélène Jammes, Laurent Schibler
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2015.01300

Forest Management Type Influences Diversity and Community Composition of Soil Fungi across Temperate Forest Ecosystems
Cited by: 117
Author(s): Kezia Goldmann, Ingo Schöning, François Buscot, Tesfaye Wubet
Software Mentions: 3
Published: over 10 years ago

10.1186/s13072-020-00358-4

Interplay of pericentromeric genome organization and chromatin landscape regulates the expression of Drosophila melanogaster heterochromatic genes
Cited by: 11
Author(s): Parna Saha, Divya Tej Sowpati, Mamilla Soujanya, Ishanee Srivastava, Rakesh K. Mishra
Software Mentions: 3
Published: almost 6 years ago

10.7554/eLife.54993

NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency
Cited by: 30
Author(s): Joana G. Marques, Berkley E. Gryder, Blaz Pavlovic, Yeonjoo Chung, Quy A. Ngo, Fabian Frommelt, Matthias Gstaiger, Young K. Song, Katharina Benischke, Dominik Laubscher, Marco Wachtel, Javed Khan, Beat W. Schäfer
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2016.00143

Improved Environmental Genomes via Integration of Metagenomic and Single-Cell Assemblies
Cited by: 22
Author(s): Daniel R. Mende, Frank O. Aylward, John M. Eppley, Torben Nielsen, Edward F. DeLong
Software Mentions: 3
Published: over 10 years ago

10.3390/metabo11050331

Cluster Thinning and Vineyard Site Modulate the Metabolomic Profile of Ribolla Gialla Base and Sparkling Wines
Cited by: 10
Author(s): Domen Škrab, Paolo Sivilotti, Piergiorgio Comuzzo, Sabrina Voce, Francesco Degano, Silvia Carlin, Panagiotis Arapitsas, Domenico Masuero, Urška Vrhovšek
Software Mentions: 3
Published: over 5 years ago

10.3390/metabo9070142

1H-NMR Metabolomics Identifies Significant Changes in Metabolism over Time in a Porcine Model of Severe Burn and Smoke Inhalation
Cited by: 5
Author(s): Cole Hendrickson, Katharina Linden, Stefan Kreyer, Gregory J. Beilman, Vittorio Scaravilli, Daniel Wendorff, Corina Necsoiu, Andriy I. Batchinsky, Leopoldo C. Cancio, Kevin K. Chung, Elizabeth R. Lusczek
Software Mentions: 3
Published: about 7 years ago

10.1186/s13072-019-0325-2

Transcription-independent TFIIIC-bound sites cluster near heterochromatin boundaries within lamina-associated domains in C. elegans
Cited by: 10
Author(s): Alexis V. Stutzman, April S. Liang, Vera Beilinson, Kohta Ikegami
Software Mentions: 3
Published: over 6 years ago

10.3390/metabo10050205

Sedentariness and Urinary Metabolite Profile in Type 2 Diabetic Patients, a Cross-Sectional Study
Cited by: 7
Author(s): Elisa Benetti, Erica Liberto, Davide Bressanello, Valentina Bordano, Arianna Carolina Rosa, Gianluca Miglio, Jonida Haxhi, Giuseppe Pugliese, Stefano Balducci, Chiara Emilia Irma Cordero
Software Mentions: 3
Published: over 6 years ago

10.3390/metabo11060364

Towards Standards for Human Fecal Sample Preparation in Targeted and Untargeted LC-HRMS Studies
Cited by: 8
Author(s): Farideh Hosseinkhani, Anne-Charlotte Dubbelman, Naama Karu, Amy C. Harms, Thomas Hankemeier
Software Mentions: 3
Published: about 5 years ago

10.3390/metabo11040206

Spinal Muscular Atrophy after Nusinersen Therapy: Improved Physiology in Pediatric Patients with No Significant Change in Urine, Serum, and Liquor 1H-NMR Metabolomes in Comparison to an Age-Matched, Healthy Cohort
Cited by: 14
Author(s): Leon Deutsch, Damjan Osredkar, Janez Plavec, Blaž Stres
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.47293

tec-1 kinase negatively regulates regenerative neurogenesis in planarians
Cited by: 9
Author(s): Alexander Karge, Nicolle A. Bonar, Scott T. Wood, Christian P. Petersen
Software Mentions: 3
Published: over 6 years ago

10.1186/s12864-018-4616-y

Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats
Cited by: 36
Author(s): Ole K. Tørresen, Marine S. O. Brieuc, Monica Hongrø Solbakken, Elin Sørhus, Alexander Johan Nederbragt, Kjetill S. Jakobsen, Sonnich Meier, Rolf B. Edvardsen, Sissel Jentoft
Software Mentions: 3
Published: over 8 years ago

10.3389/fonc.2020.01775

Cultivation of Clear Cell Renal Cell Carcinoma Patient-Derived Organoids in an Air-Liquid Interface System as a Tool for Studying Individualized Therapy
Cited by: 23
Author(s): Laura Kristin Esser, Vittorio Branchi, Sonia Leonardelli, Natalie Pelusi, Adolfo Simón, Niklas Klümper, Jörg Ellinger, Stefan Hauser, Maria A. Gonzalez‐Carmona, Manuel Ritter, Glen Kristiansen, Hubert Schorle, Michael Hölzel, Marieta Toma
Software Mentions: 3
Published: almost 6 years ago

10.1097/MD.0000000000024660

The effectiveness of problem-based learning in gynecology and obstetrics education in China
Cited by: 2
Author(s): Siwei Bi, Ruiqi Liu, Jingyi Li, Jun Gu
Software Mentions: 3
Published: over 5 years ago

10.1155/2020/1937387

Protein Level and Infantile Diarrhea in a Postweaning Piglet Model
Cited by: 10
Author(s): Jing Gao, Jie Yin, Kang Xu, Hui Han, Zemin Liu, Chenyu Wang, Tiejun Li, Yulong Yin
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-019-48007-5

Insights into Pasteurellaceae carriage dynamics in the nasal passages of healthy beef calves
Cited by: 16
Author(s): Amy Thomas, Michael Bailey, Michael R. F. Lee, Andrew Mead, Begonia Morales-Aza, Rosy Reynolds, Barry Vipond, Adam Finn, M. Eisler
Software Mentions: 3
Published: about 7 years ago

10.1007/s00405-020-06374-0

Normative tonsillectomy outcome inventory 14 values as a decision-making tool for tonsillectomy
Cited by: 6
Author(s): Michaela Plath, Matthias Sand, Philippe A. Federspil, Peter K. Plinkert, Ingo Baumann, Karim Zaoui
Software Mentions: 3
Published: almost 6 years ago

10.3390/ani10091632

Risky Business: Live Non-CITES Wildlife UK Imports and the Potential for Infectious Diseases
Cited by: 15
Author(s): Jennah Green, Emma Coulthard, John Norrey, David Megson, Neil D’Cruze
Software Mentions: 3
Published: almost 6 years ago

10.1155/2021/9960241

Exosomes Containing LINC00636 Inhibit MAPK1 through the miR-450a-2-3p Overexpression in Human Pericardial Fluid and Improve Cardiac Fibrosis in Patients with Atrial Fibrillation
Cited by: 13
Author(s): Langsha Liu, Fanyan Luo, Kaibo Lei
Software Mentions: 3
Published: about 5 years ago

10.1111/mcn.12891

Knowledge about the Developmental Origins of Health and Disease is independently associated with variation in diet quality during pregnancy
Cited by: 15
Author(s): Luseadra McKerracher, Tina Moffat, Mary Barker, Meghan McConnell, Stephanie A. Atkinson, Beth Murray‐Davis, Sarah D. McDonald, Deborah M. Sloboda
Software Mentions: 3
Published: over 6 years ago

10.3390/ma14195488

Impact of Zinc Oxide Nanoparticles on the Composition of Gut Microbiota in Healthy and Autism Spectrum Disorder Children
Cited by: 7
Author(s): Rongrong Yu, Temoor Ahmed, Hubiao Jiang, Guangming Zhou, Muchen Zhang, Luqiong Lv, Bin Li
Software Mentions: 3
Published: almost 5 years ago

10.3390/ma13153407

Fracture Load of CAD/CAM Feldspathic Crowns Influenced by Abutment Material
Cited by: 2
Author(s): Mladen Bencun, Andreas Ender, Daniel B. Wiedemeier, Albert Mehl
Software Mentions: 3
Published: about 6 years ago

10.3390/md18090456

Genome Mining, Microbial Interactions, and Molecular Networking Reveals New Dibromoalterochromides from Strains of Pseudoalteromonas of Coiba National Park-Panama
Cited by: 9
Author(s): Librada Atencio, Cristopher A. Boya P., Christian Martin H, Luis C. Mejía, Pieter C. Dorrestein, Marcelino Gutiérrez
Software Mentions: 3
Published: almost 6 years ago

10.3390/md18050237

Monogalactosyldiacylglycerol and Sulfolipid Synthesis in Microalgae
Cited by: 26
Author(s): Gennaro Riccio, Danièle De Luca, Chiara Lauritano
Software Mentions: 3
Published: over 6 years ago

10.1007/s00421-021-04744-y

Short-term heat acclimation preserves knee extensor torque but does not improve 20 km self-paced cycling performance in the heat
Cited by: 4
Author(s): John O. Osborne, Ian Stewart, David N Borg, Kenneth W. Beagley, Robert L. Buhmann, Geoffrey M. Minett
Software Mentions: 3
Published: about 5 years ago

10.7554/eLife.61073

Plasma proteomic biomarker signature of age predicts health and life span
Cited by: 63
Author(s): Toshiko Tanaka, Nathan Basisty, Giovanna Fantoni, Julián Candia, Ann Zenobia Moore, Angélique Biancotto, Birgit Schilling, Stefania Bandinelli, Luigi Ferrucci
Software Mentions: 3
Published: almost 6 years ago

10.1186/s13568-018-0726-9

Structure and predictive functional profiling of microbial communities in two biotrickling filters treated with continuous/discontinuous waste gases
Cited by: 7
Author(s): Rongfang Feng, Meiying Xu, Jianjun Li, Shaobin Huang, Gang Zhao, Xiang Tu, Guoping Sun, Jun Guo
Software Mentions: 3
Published: over 7 years ago

10.3390/ani11071927

Genome-Wide Association Study on Reproduction-Related Body-Shape Traits of Chinese Holstein Cows
Cited by: 16
Author(s): Xubin Lu, Ismail Mohamed Abdalla, Mudasir Nazar, Yongliang Fan, Zhipeng Zhang, Xinyue Wu, Tianle Xu, Zhangping Yang
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2019.02762

Hypoxia Inducible Factor 1α Inhibits the Expression of Immunosuppressive Tryptophan-2,3-Dioxygenase in Glioblastoma
Cited by: 21
Author(s): Soumya R. Mohapatra, Ahmed Sadik, Lars-Oliver Tykocinski, Jörn Dietze, Gernot Poschet, Ines Heiland, Christiane A. Opitz
Software Mentions: 3
Published: over 6 years ago

10.3390/ani11061604

The Impact of Age at First Lambing on Milk Yield and Lactation Length in a Population of Istrian Sheep under Semi-Intensive Management
Cited by: 2
Author(s): Ante Kasap, Jelena Ramljak, Boro Mioč, Valentino Držaić, Ivan Širić, Darko Jurković, Marija Špehar
Software Mentions: 3
Published: about 5 years ago

10.2196/19149

Teleconsultation Between Patients and Health Care Professionals in the Catalan Primary Care Service: Message Annotation Analysis in a Retrospective Cross-Sectional Study
Cited by: 19
Author(s): Francesc López Seguí, Sandra M. Walsh, Óscar Solans, Cristina Adroher Mas, Gabriela Ferraro, Anna García‐Altés, Francesc García Cuyàs, Luis Salvador‐Carulla, Marta Sagarra Castro, Josep Vidal-Alaball
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41431-020-0693-x

Cultural variation impacts paternal and maternal genetic lineages of the Hmong-Mien and Sino-Tibetan groups from Thailand
Cited by: 15
Author(s): Wibhu Kutanan, Rasmi Shoocongdej, Metawee Srikummool, Alexander Hübner, Thanatip Suttipai, Suparat Srithawong, Jatupol Kampuansai, Mark Stoneking
Software Mentions: 3
Published: about 6 years ago

10.1007/s00335-019-09804-5

New models for human disease from the International Mouse Phenotyping Consortium
Cited by: 47
Author(s): Pilar Cacheiro, Melissa Haendel, Damian Smedley
Software Mentions: 3
Published: about 7 years ago

10.1007/s00335-020-09831-7

Comparative genomic analysis of inbred rat strains reveals the existence of ancestral polymorphisms
Cited by: 0
Author(s): Hyeonjeong Kim, Minako Yoshihara, Mikita Suyama
Software Mentions: 3
Published: over 6 years ago

10.3390/ani11020344

Optimal Flow—A Pilot Study Balancing Sheep Movement and Welfare in Abattoirs
Cited by: 2
Author(s): Melissa J. Starling, Elyssa Payne, Paul D. McGreevy
Software Mentions: 3
Published: over 5 years ago

10.1186/s12936-020-03220-w

The response of Plasmodium falciparum to isoleucine withdrawal is dependent on the stage of progression through the intraerythrocytic cell cycle
Cited by: 16
Author(s): Kyle Jarrod McLean, Marcelo Jacobs‐Lorena
Software Mentions: 3
Published: over 6 years ago

10.1186/s12936-021-03604-6

Evaluation of the durability and use of long‐lasting insecticidal nets in Nicaragua
Cited by: 8
Author(s): Emperatriz Lugo Villalta, Aida Mercedes Soto Bravo, Lucrecia Vizcaino, Nicole Dzuris, Marco A. Delgado, Michael Green, Stephen C. Smith, Audrey Lenhart, Alexandre Macedo de Oliveira
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.57000

Subcellular sorting of neuregulins controls the assembly of excitatory-inhibitory cortical circuits
Cited by: 18
Author(s): David Exposito-Alonso, Catarina Osório, C. Bernard, Sandra Pascual-García, Isabel del Pino, Òscar Marín, Beatriz Rico
Software Mentions: 3
Published: over 5 years ago

10.1007/s00259-016-3363-z

Imaging in-vivo tau pathology in Alzheimer’s disease with THK5317 PET in a multimodal paradigm
Cited by: 106
Author(s): Konstantinos Chiotis, Laure Saint‐Aubert, Irina Savitcheva, Vesna Jelić, Pia Andersen, My Jonasson, Jonas Eriksson, Mark Lubberink, Ove Almkvist, Anders Wall, Gunnar Antoni, Agneta Nordberg
Software Mentions: 3
Published: over 10 years ago

10.3389/fmicb.2020.612344

Dynamics and Complexity of Dark Fermentation Microbial Communities Producing Hydrogen From Sugar Beet Molasses in Continuously Operating Packed Bed Reactors
Cited by: 16
Author(s): Anna Detman, Daniel Laubitz, Aleksandra Chojnacka, Ewa Wiktorowska-Sowa, Jan Piotrowski, Agnieszka Salamon, Wiktor Kaźmierczak, Mieczysław Błaszczyk, Albert Barberán, Yongjian Chen, Ewa Łupikasza, Fei Yang, Anna Sikora
Software Mentions: 3
Published: over 5 years ago

10.2196/19137

Awareness Development and Usage of Mobile Health Technology Among Individuals With Hypertension in a Rural Community of Bangladesh: Randomized Controlled Trial
Cited by: 18
Author(s): Yasmin Jahan, Moshiur Rahman, A. S. G. Faruque, Mohammod Jobayer Chisti, Kana Kazawa, Ryota Matsuyama, Michiko Moriyama
Software Mentions: 3
Published: over 5 years ago

10.1007/s00394-019-02086-2

Creatinine, total cysteine and uric acid are associated with serum retinol in patients with cardiovascular disease
Cited by: 8
Author(s): Trond E. Olsen, Kathrine J. Vinknes, Rune Blomhoff, Vegard Lysne, Øivind Midttun, Indu Dhar, Per Magne Ueland, Gard Frodahl Tveitevåg Svingen, Eva Ringdal Pedersen, Drevon Ca, Helga Refsum, Ottar Nygård
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41598-017-02314-x

Secondary metabolite genes encoded by potato rhizosphere microbiomes in the Andean highlands are diverse and vary with sampling site and vegetation stage
Cited by: 19
Author(s): Gajender Aleti, Biljana Nikolić, Günter Brader, Ram Vinay Pandey, Livio Antonielli, Stefan Pfeiffer, Andreas Oswald, Angela Sessitsch
Software Mentions: 3
Published: about 9 years ago

10.1038/s41598-019-45588-z

Enterotype-based Analysis of Gut Microbiota along the Conventional Adenoma-Carcinoma Colorectal Cancer Pathway
Cited by: 38
Author(s): Tzu Wei Yang, Wei Hsiang Lee, Siang Jyun Tu, Wei Huang, Huimei Chen, Ting Sun, Max Tsai, Chi‐Chih Wang, Hsuan‐Yi Chen, Chun‐Chia Huang, Bei Hao Shiu, Hsin Tzu Huang, Yu Pao Chou, Chih Hung Chou, Ya Huang, Yi Sun, Chao Liang, Feng Lin, Shinn-Ying Ho, Wen Liang Chen, Shun Fa Yang, Kwo Chang Ueng, Hsien Da Huang, Cheng‐Yi Huang, Yuh Jyh Jong, Chun Lin
Software Mentions: 3
Published: about 7 years ago

10.1186/s12935-021-02031-6

The underlying molecular mechanisms and prognostic factors of RNA binding protein in colorectal cancer: a study based on multiple online databases
Cited by: 1
Author(s): Qinglian He, Ziqi Li, Lijun Xue, Qian Zhou, Haibing Yu, Yuanlin Ding, Guofeng Xu, Wei Zhu
Software Mentions: 3
Published: about 5 years ago

10.7554/eLife.54928

A broad mutational target explains a fast rate of phenotypic evolution
Cited by: 11
Author(s): Fabrice Besnard, João Picão-Osório, Clément Dubois, Marie‐Anne Félix
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12935-021-02185-3

Calculated identification of mutator-derived lncRNA signatures of genomic instability to predict the clinical outcome of muscle-invasive bladder cancer
Cited by: 1
Author(s): Yingchun Liang, Fangdie Ye, Cheng Zhang, Yuxi Ou, Lina Zou, Yun Hu, Jimeng Hu, Haowen Jiang
Software Mentions: 3
Published: almost 5 years ago

10.3389/fmicb.2021.667394

Pulse Frequency in Crop Rotations Alters Soil Microbial Community Networks and the Relative Abundance of Fungal Plant Pathogens
Cited by: 5
Author(s): Tony Yang, Bianca Evans, Luke D. Bainard
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2021.612432

Global Geographic and Temporal Analysis of SARS-CoV-2 Haplotypes Normalized by COVID-19 Cases During the Pandemic
Cited by: 13
Author(s): Santiago Justo Arévalo, Daniela Zapata Sifuentes, César J. Huallpa, Gianfranco Landa Bianchi, Adriana Castillo Chávez, Romina Garavito-Salini Casas, Guillermo Uceda-Campos, Roberto Pineda
Software Mentions: 3
Published: over 5 years ago

10.1186/s12866-021-02288-x

Comparison of targeted metagenomics and IS-Pro methods for analysing the lung microbiome
Cited by: 2
Author(s): Tanweer Goolam Mahomed, Rph Peters, Ghj Pretorius, Akhter Goolam Mahomed, Veronica Ueckermann, Marleen M. Kock, M.M. Ehlers
Software Mentions: 3
Published: about 5 years ago

10.1186/s12935-021-02155-9

Pan-cancer analysis of the oncogenic role of discs large homolog associated protein 5 (DLGAP5) in human tumors
Cited by: 11
Author(s): Neng Tang, Xiaoguang Dou, Xing You, Qiman Shi, Mujing Ke, Guodong Liu
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-018-20369-2

Effects of the floral phytochemical eugenol on parasite evolution and bumble bee infection and preference
Cited by: 15
Author(s): Evan C. Palmer‐Young, Austin C. Calhoun, A. G. Mirzayeva, Benn M. Sadd
Software Mentions: 3
Published: over 8 years ago

10.1186/s13568-020-00984-x

Diversity of active root-associated methanotrophs of three emergent plants in a eutrophic wetland in northern China
Cited by: 15
Author(s): Jiahe Cui, Ji Zhao, Zheng Wang, Weiwei Cao, Shaohua Zhang, Jumei Liu, Zhihua Bao
Software Mentions: 3
Published: over 6 years ago

10.1111/cns.13688

TROAP regulates cell cycle and promotes tumor progression through Wnt/β‐Catenin signaling pathway in glioma cells
Cited by: 17
Author(s): Zongqing Zhao, Xiujie Wu, Yalin Cheng, Yunfei Zhou, Xi-Meng Ma, Jian Zhang, Xueyuan Heng, Fang Fěng
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-46535-8

Insights into the Microbiome of Breast Implants and Periprosthetic Tissue in Breast Implant-Associated Anaplastic Large Cell Lymphoma
Cited by: 70
Author(s): Jennifer N. Walker, Blake Hanson, Chloe L. Pinkner, Shelby Simar, Jerome S. Pinkner, Rohan Parikh, Mark W. Clemens, Scott J. Hultgren, Terence M. Myckatyn
Software Mentions: 3
Published: about 7 years ago

10.2807/1560-7917.ES.2020.25.45.1900414

Rates of increase of antibiotic resistance and ambient temperature in Europe: a cross-national analysis of 28 countries between 2000 and 2016
Cited by: 40
Author(s): Sarah F. McGough, Derek R. MacFadden, Mohammad W. Hattab, Kåre Mølbak, Mauricio Santillana
Software Mentions: 3
Published: almost 6 years ago

10.3390/ani10030426

Effects of Different Stroking Styles on Behaviour and Cardiac Parameters in Heifers
Cited by: 10
Author(s): Annika Lange, Sandra Franzmayr, Vera Wisenöcker, Andreas Futschik, Susanne Waiblinger, Stephanie Lürzel
Software Mentions: 3
Published: over 6 years ago

10.1007/s10549-016-4018-2

Association of breast cancer risk in BRCA1 and BRCA2 mutation carriers with genetic variants showing differential allelic expression: identification of a modifier of breast cancer risk at locus 11q22.3
Cited by: 18
Author(s): Yosr Hamdi, Penny Soucy, Karoline B. Kuchenbaeker, Tomi Pastinen, Arnaud Droit, Audrey Lemaçon, Julian Adlard, Kristiina Aittomäki, Irene L. Andrulis, Aðalgeir Arason, Norbert Arnold, Banu K. Arun, Jacopo Azzollini, Anita Bane, Laure Barjhoux, Daniel Barrowdale, Javier Benı́tez, Pascaline Berthet, Marinus J. Blok, Kristie Bobolis, Valérie Bonadona, Bernardo Bonanni, Angela R. Bradbury, Carole Brewer, Benedetto Bruno, Saundra S. Buys, Maria A. Caligo, Jocelyne Chiquette, Wendy K. Chung, Kathleen Claes, Mary B. Daly, Francesca Damiola, Rosemarie Davidson, Miguel de la Hoya, Kim De Leeneer, Orland Díez, Yuan Chun Ding, Riccardo Dolcetti, Susan M. Domchek, Cecilia M. Dorfling, Diana Eccles, Rosalind Eeles, Zakaria Einbeigi, Bent Ejlertsen, Christoph Engel, D. Gareth Evans, Lídia Feliubadaló, Lenka Foretová, Florentia Fostira, William D. Foulkes, George Fountzilas, Eitan Friedman, Debra Frost, Pamela Ganschow, Patricia A. Ganz, Judy E. Garber, Simon A. Gayther, Anne–Marie Gerdes, Gord Glendon, Andrew K. Godwin, David E. Goldgar, Mark H. Greene, Jacek Gronwald, Eric Hahnen, Ute Hamann, Thomas V.O. Hansen, Steven N. Hart, John L. Hays, Frans B.L. Hogervorst, Peter J. Hulick, Evgeny N. Imyanitov, Claudine Isaacs, Louise Izatt, Anna Jakubowska, Paul James, Ramūnas Janavičius, Uffe Birk Jensen, Esther M. John, Joseph Vijai, Walter Just, Katarzyna Kaczmarek, Beth Y. Karlan, C. Marleen Kets, Judy Kirk, Mieke Kriege, Yael Laitman, M Laurent, Conxi Lázaro, Goska Leslie, Jenny Lester, Fabienne Lesueur, Annelie Liljegren, Niklas Loman, Jennifer T. Loud, Siranoush Manoukian, Milena Mariani, Sylvie Mazoyer, Lesley McGuffog, Hanne Meijers-Heijboer, Alfons Meindl, Austin Miller, Marco Montagna, Anna Marie Mulligan, Katherine L. Nathanson, Susan L. Neuhausen, Heli Nevanlinna, Robert L. Nussbaum, Edith Olàh, Olufunmilayo I. Olopade, Kai Ren Ong, Jan C. Oosterwijk, Ana Osorio, Laura Papi, Sue Kyung Park, Inge Søkilde Pedersen, Bernard Peissel, Pedro Pérez Segura, Paolo Peterlongo, Catherine M. Phelan, Paolo Radice, Johanna Rantala, Christine Rappaport-Fuerhauser, Gad Rennert, Andrea L. Richardson, Mark E. Robson, Gustavo C. Rodriguez, Matti A. Rookus, Rita K. Schmutzler, Nicolas Sévenet, Payal D. Shah, Christian F. Singer, Thomas P. Slavin, Katie Snape, Johanna Sokolowska, Ida Marie Heeholm Sønderstrup, Melissa C. Southey, Amanda B. Spurdle, Zsofia K. Stadler, Dominique Stoppa‐Lyonnet, Grzegorz Sukiennicki, Christian Sutter, Yen Y. Tan, Muy Kheng Tea, Manuel R. Teixeira, Alexandre Teulé, Soo Hwang Teo, Mary Beth Terry, Mads Thomassen, Laima Tihomirova, Marc Tischkowitz, Silvia Tognazzo, Amanda E. Toland, Nadine Tung, Ans M.W. van den Ouweland, Rob B. van der Luijt, Klaartje van Engelen, Elizabeth J. van Rensburg, Raymonda Varon-Mateeva, Barbara Wappenschmidt, Juul T. Wijnen, Timothy R. Rebbeck, Georgia Chenevix-Trench, Kenneth Offit, Fergus J. Couch, Silje Nord, Douglas F. Easton, Antonis C. Antoniou, Jacques Simard
Software Mentions: 3
Published: almost 10 years ago

10.3390/ani10020348

Effects of Farrowing Stall Layout and Number of Heat Lamps on Sow and Piglet Production Performance
Cited by: 8
Author(s): Suzanne M Leonard, Hongwei Xin, T. M. Brown–Brandl, Brett C. Ramirez, Somak Dutta, Gary A. Rohrer
Software Mentions: 3
Published: over 6 years ago

10.1186/s12974-020-01898-y

Meta-analysis of mouse transcriptomic studies supports a context-dependent astrocyte reaction in acute CNS injury versus neurodegeneration
Cited by: 54
Author(s): Sudeshna Das, Zhaozhi Li, Ayush Noori, Bradley T. Hyman, Alberto Serrano-Pozo
Software Mentions: 3
Published: about 6 years ago

10.7554/eLife.59659

Def6 regulates endogenous type-I interferon responses in osteoblasts and suppresses osteogenesis
Cited by: 9
Author(s): Zhonghao Deng, Courtney Ng, Kenzo Inoue, Ziyu Chen, Yuhan Xia, Xiaoyu Hu, Matthew B. Greenblatt, Alessandra B. Pernis, Baohong Zhao
Software Mentions: 3
Published: over 5 years ago

10.3390/ani10091641

The Effect of Transitioning between Feeding Methods on the Gut Microbiota Dynamics of Yaks on the Qinghai–Tibet Plateau
Cited by: 11
Author(s): Xiaoling Zhang, Tianwei Xu, Xungang Wang, Yuanyue Geng, Hongjin Liu, Linyong Hu, Na Zhao, Shenghong Kang, Wan-Min Zhang, Shixiao Xu
Software Mentions: 3
Published: almost 6 years ago

10.3389/fimmu.2017.00723

Unperturbed Cytotoxic Lymphocyte Phenotype and Function in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Patients
Cited by: 15
Author(s): Jakob Theorell, Indrė Bilevičiūtė-Ljungar, Bianca Tesi, Heinrich Schlums, Mette Sophie Johnsgaard, Babak Asadi-Azarbaijani, Elin Bolle Strand, Yenan T. Bryceson
Software Mentions: 3
Published: about 9 years ago

10.1186/1471-2415-13-40

Tear fluid proteomics multimarkers for diabetic retinopathy screening
Cited by: 46
Author(s): Zsuzsa Török, Tünde Pető, Éva Csősz, Edit Tukacs, Ágnes Molnár, Zsuzsanna Maros-Szabó, András Berta, József Tőzsér, András Hajdú, Valéria Nagy, Bálint Domokos, Adrienne Csutak
Software Mentions: 3
Published: about 13 years ago

10.1080/21623945.2021.1889815

Effects of non-vascularized adipose tissue transplantation on its genetic profile
Cited by: 1
Author(s): Jeannine Susanne Schreiter, Olga Kurow, Stefan Langer, M. Steinert, Lucas Massier
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.49555

Decreasing human body temperature in the United States since the Industrial Revolution
Cited by: 90
Author(s): Myroslava Protsiv, Catherine Ley, Joanna Lankester, Trevor Hastie, Julie Parsonnet
Software Mentions: 3
Published: over 6 years ago

10.3390/brainsci8020024

Consonant and Vowel Processing in Word Form Segmentation: An Infant ERP Study
Cited by: 15
Author(s): Katie Von Holzen, Léo‐Lyuki Nishibayashi, Thierry Nazzi
Software Mentions: 3
Published: over 8 years ago

10.1186/s12916-020-01817-1

Neutrophil to lymphocyte ratio and cancer prognosis: an umbrella review of systematic reviews and meta-analyses of observational studies
Cited by: 186
Author(s): Meghan A. Cupp, Margarita Cariolou, Ioanna Tzoulaki, Dagfinn Aune, Εvangelos Εvangelou, Antonio J. Berlanga‐Taylor
Software Mentions: 3
Published: almost 6 years ago

10.3390/foods9121874

Effects of Production Region, Production Systems and Grape Type/Variety on Nutritional Quality Parameters of Table Grapes; Results from a UK Retail Survey
Cited by: 12
Author(s): Gultakin Hasanaliyeva, Eleni Chatzidimitrou, Wang Juan, Marcin Barański, Nikolaos Volakakis, Chris Seal, Eduardo Rosa, Per Ole Iversen, Vanessa Vigar, Bronwyn J. Barkla, Carlo Leifert, Leonidas Rempelos
Software Mentions: 3
Published: over 5 years ago

10.3390/foods8120641

Temporal Check-All-That-Apply (TCATA) Reveals Matrix Interaction Effects on Flavor Perception in a Model Wine Matrix
Cited by: 10
Author(s): Andrew R. Poveromo, Helene Hopfer
Software Mentions: 3
Published: over 6 years ago

10.7554/eLife.65902

Mechanistic theory predicts the effects of temperature and humidity on inactivation of SARS-CoV-2 and other enveloped viruses
Cited by: 134
Author(s): Dylan H. Morris, Claude Kwe Yinda, Amandine Gamble, Fernando W. Rossine, Qishen Huang, Trenton Bushmaker, Robert J. Fischer, M. Jeremiah Matson, Neeltje van Doremalen, Peter J. Vikesland, Linsey C. Marr, Vincent J. Munster, James O. Lloyd‐Smith
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2021.703846

Identification of Novel Low-Density Neutrophil Markers Through Unbiased High-Dimensional Flow Cytometry Screening in Non-Small Cell Lung Cancer Patients
Cited by: 11
Author(s): Paulina Valadez-Cosmes, Kathrin Maitz, Oliver Kindler, Sofia Raftopoulou, Melanie Kienzl, Ana Santiso, Zala Nikita Mihalič, Luka Brčić, Jörg Lindenmann, Melanie Fediuk, Martin Pichler, Rudolf Schicho, A. McGarry Houghton, Ákos Heinemann, Julia Kargl
Software Mentions: 3
Published: about 5 years ago

Projects: cran: ggplot2

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Papers Mentioning ggplot2 11,441