cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0205880

Biomass recalcitrance in barley, wheat and triticale straw: Correlation of biomass quality with classic agronomical traits
Cited by: 7
Author(s): Francisco J. Ostos-Garrido, Fernando Pistón, Leonardo D. Gómez, Simon J. McQueen‐Mason
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0118501

Adaptive Differentiation in Seedling Traits in a Hybrid Pine Species Complex, Pinus densata and Its Parental Species, on the Tibetan Plateau
Cited by: 4
Author(s): Jianghong Meng, Jian‐Feng Mao, Zhao Wang, Fangqian Xing, Xinyu Chen, Hao Liu, Zhen Xing, Xiaoru Wang, Yue Li
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.pone.0209115

Strain specific differences in rates of Photosystem II repair in picocyanobacteria correlate to differences in FtsH protein levels and isoform expression patterns
Cited by: 9
Author(s): Erin M. Bonisteel, Brooke E. Turner, Cole D. Murphy, Jenna‐Rose Melanson, Nicole Marie Duff, Brian D. Beardsall, Kui Xu, Douglas A. Campbell, Amanda M. Cockshutt
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0198950

Negative self-referential processing is associated with genetic variation in the serotonin transporter-linked polymorphic region (5-HTTLPR): Evidence from two independent studies
Cited by: 6
Author(s): Justin Dainer-Best, Seth G. Disner, John E. McGeary, Bethany Hamilton, Christopher G. Beevers
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.pone.0243652

The Masters athlete in Olympic weightlifting: Training, lifestyle, health challenges, and gender differences
Cited by: 17
Author(s): Marianne Huebner, David E. Meltzer, Wenjuan Ma, Holly Arrow
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0230905

Identification of human peripheral blood monocyte gene markers for early screening of solid tumors
Cited by: 11
Author(s): Siyang Chen, Menghan Liu, Bowen Liang, Shanghua Ge, Jie Peng, Haiyue Huang, Ye Xu, Xiaoli Tang, Libin Deng
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0254847

Both high and low pre-infection glucose levels associated with increased risk for severe COVID-19: New insights from a population-based study
Cited by: 16
Author(s): Michal Shauly‐Aharonov, Asher Shafrir, Ora Paltiel, Ronit Calderon‐Margalit, Rifaat Safadi, Roee Bicher, Orit Barenholz-Goultschin, Joshua Stokar
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0229956

Trajectories toward maximum power and inequality in resource distribution networks
Cited by: 2
Author(s): Natalie Davis, Andrew Jarvis, Matt Aitkenhead, Gary Polhill
Software Mentions: 3
Published: over 6 years ago

10.3390/cancers13153889

Chromosomal Translocations in NK-Cell Lymphomas Originate from Inter-Chromosomal Contacts of Active rDNA Clusters Possessing Hot Spots of DSBs
Cited by: 6
Author(s): Nickolai A. Tchurikov, Л. А. Урошлев, Elena S. Klushevskaya, Ildar R. Alembekov, Maria A. Lagarkova, Galina I. Kravatskaya, Vsevolod J. Makeev, Yuri V. Kravatsky
Software Mentions: 3
Published: almost 5 years ago

10.3390/cancers11060883

Chemotherapeutic Drugs Inhibiting Topoisomerase 1 Activity Impede Cytokine-Induced and NF-κB p65-Regulated Gene Expression
Cited by: 9
Author(s): Tabea Riedlinger, Marek Bartkuhn, Tobias Zimmermann, Sandra B. Hake, Andrea Nist, Thorsten Stiewe, Michael Kracht, M. Lienhard Schmitz
Software Mentions: 3
Published: almost 7 years ago

10.3390/cancers11030309

Compositional and Functional Differences between Microbiota and Cervical Carcinogenesis as Identified by Shotgun Metagenomic Sequencing
Cited by: 35
Author(s): Minji Kwon, Seung‐Woo Seo, Mi Kyung Kim, Dong Ock Lee, Myoung Cheol Lim
Software Mentions: 3
Published: over 7 years ago

10.3390/cancers8060055

RASSF1A Site-Specific Methylation Hotspots in Cancer and Correlation with RASSF1C and MOAP-1
Cited by: 13
Author(s): Natalia Volodko, Mohamed Salla, Alaa Zare, El-Arbi Abulghasem, Krista Vincent, Matthew G.K. Benesch, Todd McMullen, Oliver F. Bathe, Lynne-Marie Postovit, Shairaz Baksh
Software Mentions: 3
Published: about 10 years ago

10.1186/s13148-019-0760-8

The phenotypic variations of multi-locus imprinting disturbances associated with maternal-effect variants of NLRP5 range from overt imprinting disorder to apparently healthy phenotype
Cited by: 19
Author(s): Ángela Sparago, Ankit Verma, Maria Grazia Patricelli, Laura Pignata, Silvia Russo, Luciano Calzari, Naomi De Francesco, Rosita Del Prete, Orazio Palumbo, Massimo Carella, Deborah J G Mackay, Faisal I. Rezwan, Claudia Angelini, Flavia Cerrato, Maria Vittoria Cubellis, Andrea Riccio
Software Mentions: 3
Published: over 6 years ago

10.1186/s13148-020-00925-2

Loss-of-function maternal-effect mutations of PADI6 are associated with familial and sporadic Beckwith-Wiedemann syndrome with multi-locus imprinting disturbance
Cited by: 37
Author(s): Maria Vittoria Cubellis, Laura Pignata, Ankit Verma, Ángela Sparago, Rosita Del Prete, Maria Monticelli, Luciano Calzari, Vincenzo Antona, Daniela Melis, Romano Tenconi, Silvia Russo, Flavia Cerrato, Andrea Riccio
Software Mentions: 3
Published: almost 6 years ago

10.1007/s00784-021-03860-5

Gingival phenotype assessment methods and classifications revisited: a preclinical study
Cited by: 7
Author(s): Kai R. Fischer, Jasmin Büchel, Tiziano Testori, Giulio Rasperini, Thomas Attin, Patrick R. Schmidlin
Software Mentions: 3
Published: over 5 years ago

10.1007/s00784-016-2024-8

Efficacy of desensitizing products containing 8% arginine and calcium carbonate for hypersensitivity relief in MIH-affected molars: an 8-week clinical study
Cited by: 43
Author(s): Katrin Bekes, Karolin Heinzelmann, Stefan Lettner, Hans‐Günter Schaller
Software Mentions: 3
Published: over 9 years ago

10.1186/s12014-021-09323-z

Robust optimization of SWATH-MS workflow for human blood serum proteome analysis using a quality by design approach
Cited by: 2
Author(s): Edith Serrano-Blesa, Andrew C.G. Porter, Dennis Lendrem, Costantino Pitzalis, Anne Barton, Achim Treumann, John D. Isaacs
Software Mentions: 3
Published: almost 5 years ago

10.1002/ctm2.97

A metagenomic study of biliary microbiome change along the cholecystitis‐carcinoma sequence
Cited by: 11
Author(s): Xiaoling Song, Xuan Wang, Yunping Hu, Huaifeng Li, Tianhui Ren, Yongsheng Li, Liguo Liu, Lin Li, Xuechuan Li, Ziyi Wang, Wen Huang, Runfa Bao, Yijian Zhang, Maolan Li, Xuefeng Wang, Feng Liu, Jun Gu, Linhui Zheng, Weiping Wu, Yingbin Liu
Software Mentions: 3
Published: about 6 years ago

10.3390/clockssleep3010003

Risk-Based Decision Making: A Systematic Scoping Review of Animal Models and a Pilot Study on the Effects of Sleep Deprivation in Rats
Cited by: 4
Author(s): Cathalijn Leenaars, Stevie van der Mierden, R Joosten, Marnix A Van der Weide, Mischa Schirris, Maurice Demattéis, F.L.B. Meijboom, Matthijs G.P. Feenstra, André Bleich
Software Mentions: 3
Published: over 5 years ago

10.1038/s42003-021-02588-y

Burkholderia PglL enzymes are Serine preferring oligosaccharyltransferases which target conserved proteins across the Burkholderia genus
Cited by: 3
Author(s): Andrew Hayes, Jessica M Lewis, Mark R. Davies, Nichollas E. Scott
Software Mentions: 3
Published: almost 5 years ago

10.1038/s42003-021-02242-7

A human isogenic iPSC-derived cell line panel identifies major regulators of aberrant astrocyte proliferation in Down syndrome
Cited by: 11
Author(s): Keiji Kawatani, Toshihiko Nambara, Nobutoshi Nawa, Hidetaka Yoshimatsu, Haruna Kusakabe, Katsuya Hirata, Akira Tanave, Kenta Sumiyama, Kimihiko Banno, Hidetoshi Taniguchi, Hitomi Arahori, Keiichi Ozono, Yasuji Kitabatake
Software Mentions: 3
Published: about 5 years ago

10.1038/s42003-021-02510-6

Salvaging high-quality genomes of microbial species from a meromictic lake using a hybrid sequencing approach
Cited by: 9
Author(s): Yu-Hsiang Chen, Pei‐Wen Chiang, D. Yu. Rogozin, Andrey G. Degermendzhy, Hsiu‐Hui Chiu, Sen‐Lin Tang
Software Mentions: 3
Published: almost 5 years ago

10.1038/s42003-018-0220-6

A minimum information standard for reproducing bench-scale bacterial cell growth and productivity
Cited by: 21
Author(s): Ariel Hecht, James J. Filliben, Sarah A. Munro, Marc Salit
Software Mentions: 3
Published: over 7 years ago

10.1038/s42003-018-0176-6

Incomplete lineage sorting rather than hybridization explains the inconsistent phylogeny of the wisent
Cited by: 76
Author(s): Kun Wang, Johannes A. Lenstra, Liang Liu, Quanjun Hu, Tao Ma, Qiang Qiu, Jianquan Liu
Software Mentions: 3
Published: over 7 years ago

10.1038/s42003-020-01534-8

Temperature modulates stress response in mainstream anammox reactors
Cited by: 12
Author(s): Robert Niederdorfer, Damian Hausherr, Alejandro Palomo, Jing Wei, Paul Magyar, Barth F. Smets, Adriano Joss, Helmut Bürgmann
Software Mentions: 3
Published: over 5 years ago

10.1038/s42003-020-1073-3

Task rule and choice are reflected by layer-specific processing in rodent auditory cortical microcircuits
Cited by: 14
Author(s): Marina M. Zempeltzi, Martin Kisse, Michael G. K. Brunk, Claudia Glemser, Sümeyra Aksit, Katrina E. Deane, Sandip Maurya, Lina Schneider, Frank W. Ohl, Matthias Deliano, Max F. K. Happel
Software Mentions: 3
Published: almost 6 years ago

10.1038/s42003-019-0718-6

Monocytes undergo multi-step differentiation in mice during oral infection by Toxoplasma gondii
Cited by: 8
Author(s): Aurélie Detavernier, Abdulkader Azouz, Hussein Shehade, Marion Splittgerber, Laurye Van Maele, Muriel Nguyen, Séverine Thomas, Younès Achouri, David Švec, Emilie Calonne, François Fuks, Guillaume Oldenhove, Stanislas Goriely
Software Mentions: 3
Published: over 6 years ago

10.1038/s41426-018-0097-y

The concordance between upper and lower respiratory microbiota in children with Mycoplasma pneumoniae pneumonia
Cited by: 22
Author(s): Wenkui Dai, Heping Wang, Qian Zhou, Xin Feng, Zhiwei Lü, Dongfang Li, Zhenyu Yang, Yanhong Liu, Yinhu Li, Guoli Xie, Kunling Shen, Yonghong Yang, Yuejie Zheng, Shuai Cheng Li
Software Mentions: 3
Published: about 8 years ago

10.1080/22221751.2021.1951124

Infection dynamics of Salmonella Infantis strains displaying different genetic backgrounds – with or without pESI-like plasmid – vary considerably
Cited by: 12
Author(s): Victoria Drauch, Christian Kornschober, Nicola Palmieri, Michael Heß, Claudia Heß
Software Mentions: 3
Published: over 5 years ago

10.1289/ehp.0800376

Bisphenol A Data in NHANES Suggest Longer than Expected Half-Life, Substantial Nonfood Exposure, or Both
Cited by: 367
Author(s): Richard W. Stahlhut, Wade V. Welshons, Shanna H. Swan
Software Mentions: 3
Published: about 17 years ago

10.1007/s00267-017-0889-1

Macroinvertebrate Taxonomic and Functional Trait Compositions within Lotic Habitats Affected By River Restoration Practices
Cited by: 30
Author(s): James C. White, Matthew J. Hill, Melanie A. Bickerton, Paul J. Wood
Software Mentions: 3
Published: about 9 years ago

10.1111/1462-2920.13954

Application of stable‐isotope labelling techniques for the detection of active diazotrophs
Cited by: 40
Author(s): Roey Angel, Christopher Panhölzl, Raphael Gabriel, Craig W. Herbold, Wolfgang Wanek, Andreas Richter, Stephanie A. Eichorst, Dagmar Woebken
Software Mentions: 3
Published: over 8 years ago

10.1111/1462-2920.14913

Extremely halophilic archaeal communities are resilient to short‐term entombment in halite
Cited by: 12
Author(s): Tom J. C. Huby, Dave R. Clark, Boyd A. McKew, Terry J. McGenity
Software Mentions: 3
Published: over 6 years ago

10.1111/1462-2920.14043

Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments
Cited by: 197
Author(s): Stephanie A. Eichorst, Daniela Trojan, Simon Roux, Craig W. Herbold, Thomas Rattei, Dagmar Woebken
Software Mentions: 3
Published: over 8 years ago

10.1186/s40793-019-0347-1

The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples
Cited by: 58
Author(s): Hyun S. Gweon, Liam P. Shaw, Jeremy Swann, Nicola De Maio, Manal AbuOun, René Niehus, Alasdair T. M. Hubbard, Michael J. Bowes, Mark Bailey, Tim Peto, Sarah Hoosdally, A Sarah Walker, Robert Sebra, Derrick W. Crook, Muna F. Anjum, Daniel S. Read, Nicole Stoesser
Software Mentions: 3
Published: over 6 years ago

10.1007/s11356-018-1626-x

Factors determining the occurrence of anthropogenic materials in nests of the white stork Ciconia ciconia
Cited by: 41
Author(s): Zuzanna Jagiełło, Łukasz Dylewski, Dominika Winiarska, Katarzyna M. Żołnierowicz, Marcin Tobółka
Software Mentions: 3
Published: over 8 years ago

10.1017/S2045796021000020

The role of ageing in the wish to be dead: disentangling age, period and cohort effects in suicide ideation in European population
Cited by: 1
Author(s): María Cabello, Laura Alejandra Rico-Uribe, José Carlos Martínez-Ávila, Albert Sánchez-Niubò, F.F. Caballero, Guilherme Borges, Blanca Mellor-Marsá, Josep María Haro, Matthew Prina, Seppo Koskinen, José Luís Ayuso-Mateos
Software Mentions: 3
Published: over 5 years ago

10.1017/S2045796019000568

Perceived need and barriers to adolescent mental health care: agreement between adolescents and their parents
Cited by: 18
Author(s): Nina Schnyder, David Lawrence, Radoslaw Panczak, Michael Sawyer, Harvey Whiteford, Philip Burgess, Meredith Harris
Software Mentions: 3
Published: almost 7 years ago

10.1080/15592294.2019.1700003

Correlation of Infinium HumanMethylation450K and MethylationEPIC BeadChip arrays in cartilage
Cited by: 8
Author(s): Kathleen Cheung, M. J. Burgers, David A. Young, Simon Cockell, Louise N. Reynard
Software Mentions: 3
Published: over 6 years ago

10.1186/s13072-021-00397-5

Dynamics of cattle sperm sncRNAs during maturation, from testis to ejaculated sperm
Cited by: 21
Author(s): Eli Sellem, Sylvain Marthey, Andrea Rau, Luc Jouneau, A. Bonnet, Chrystelle Le Danvic, Benoît Guyonnet, Hélène Kiefer, Hélène Jammes, Laurent Schibler
Software Mentions: 3
Published: about 5 years ago

10.1186/s13072-020-00358-4

Interplay of pericentromeric genome organization and chromatin landscape regulates the expression of Drosophila melanogaster heterochromatic genes
Cited by: 11
Author(s): Parna Saha, Divya Tej Sowpati, Mamilla Soujanya, Ishanee Srivastava, Rakesh K. Mishra
Software Mentions: 3
Published: over 5 years ago

10.1186/s13072-019-0325-2

Transcription-independent TFIIIC-bound sites cluster near heterochromatin boundaries within lamina-associated domains in C. elegans
Cited by: 10
Author(s): Alexis V. Stutzman, April S. Liang, Vera Beilinson, Kohta Ikegami
Software Mentions: 3
Published: over 6 years ago

10.1007/s00405-020-06374-0

Normative tonsillectomy outcome inventory 14 values as a decision-making tool for tonsillectomy
Cited by: 6
Author(s): Michaela Plath, Matthias Sand, Philippe A. Federspil, Peter K. Plinkert, Ingo Baumann, Karim Zaoui
Software Mentions: 3
Published: almost 6 years ago

10.1007/s00421-021-04744-y

Short-term heat acclimation preserves knee extensor torque but does not improve 20 km self-paced cycling performance in the heat
Cited by: 4
Author(s): John O. Osborne, Ian Stewart, David N Borg, Kenneth W. Beagley, Robert L. Buhmann, Geoffrey M. Minett
Software Mentions: 3
Published: about 5 years ago

10.1038/s41431-020-0693-x

Cultural variation impacts paternal and maternal genetic lineages of the Hmong-Mien and Sino-Tibetan groups from Thailand
Cited by: 15
Author(s): Wibhu Kutanan, Rasmi Shoocongdej, Metawee Srikummool, Alexander Hübner, Thanatip Suttipai, Suparat Srithawong, Jatupol Kampuansai, Mark Stoneking
Software Mentions: 3
Published: almost 6 years ago

10.1007/s00259-016-3363-z

Imaging in-vivo tau pathology in Alzheimer’s disease with THK5317 PET in a multimodal paradigm
Cited by: 106
Author(s): Konstantinos Chiotis, Laure Saint‐Aubert, Irina Savitcheva, Vesna Jelić, Pia Andersen, My Jonasson, Jonas Eriksson, Mark Lubberink, Ove Almkvist, Anders Wall, Gunnar Antoni, Agneta Nordberg
Software Mentions: 3
Published: over 10 years ago

10.1007/s00394-019-02086-2

Creatinine, total cysteine and uric acid are associated with serum retinol in patients with cardiovascular disease
Cited by: 8
Author(s): Trond E. Olsen, Kathrine J. Vinknes, Rune Blomhoff, Vegard Lysne, Øivind Midttun, Indu Dhar, Per Magne Ueland, Gard Frodahl Tveitevåg Svingen, Eva Ringdal Pedersen, Drevon Ca, Helga Refsum, Ottar Nygård
Software Mentions: 3
Published: almost 7 years ago

10.2807/1560-7917.ES.2020.25.45.1900414

Rates of increase of antibiotic resistance and ambient temperature in Europe: a cross-national analysis of 28 countries between 2000 and 2016
Cited by: 40
Author(s): Sarah F. McGough, Derek R. MacFadden, Mohammad W. Hattab, Kåre Mølbak, Mauricio Santillana
Software Mentions: 3
Published: over 5 years ago

10.3389/fcell.2020.615671

Identification of lncRNA-mRNA Regulatory Module to Explore the Pathogenesis and Prognosis of Melanoma
Cited by: 17
Author(s): Jiaqi Zhang, Hui Liu, Wenhao Zhang, Yinfang Li, Zhipeng Fan, Hua Jiang, Judong Luo
Software Mentions: 3
Published: over 5 years ago

10.3389/fcell.2020.572628

DNA Methylation-Based Panel Predicts Survival of Patients With Clear Cell Renal Cell Carcinoma and Its Correlations With Genomic Metrics and Tumor Immune Cell Infiltration
Cited by: 4
Author(s): Xiaoping Li, Lingao Ju, Chen Chen, Tongzu Liu, Sheng Li, Xinghuan Wang
Software Mentions: 3
Published: over 5 years ago

10.3389/fcell.2021.692517

Distinct Gene Expression Patterns of Two Heat Shock Protein 70 Members During Development, Diapause, and Temperature Stress in the Freshwater Crustacean Daphnia magna
Cited by: 3
Author(s): Luxi Chen, Rocío Gómez, Linda C. Weiss
Software Mentions: 3
Published: almost 5 years ago

10.3389/fcimb.2018.00057

Chronic Rhinosinusitis: Potential Role of Microbial Dysbiosis and Recommendations for Sampling Sites
Cited by: 64
Author(s): Elizabeth Copeland, Katherine M. Leonard, Richard L. Carney, Justin Kong, Martin Forer, Yuresh Naidoo, Brian G. Oliver, Justin R. Seymour, Stephen Woodcock, Catherine Burke, Nicholas W. Stow
Software Mentions: 3
Published: over 8 years ago

10.3389/fcimb.2021.641920

Persistent Bacterial Coinfection of a COVID-19 Patient Caused by a Genetically Adapted Pseudomonas aeruginosa Chronic Colonizer
Cited by: 44
Author(s): Jiuxin Qu, Zhao Cai, Yumei Liu, Xiangke Duan, Shuhong Han, Jihong Liu, Yuao Zhu, Zhichao Jiang, Yingdan Zhang, Chao Zhuo, Yang Liu, Yingxia Liu, Lei Liu, Liang Yang
Software Mentions: 3
Published: over 5 years ago

10.3389/fcimb.2020.00336

Distinct Skin Microbiota Imbalance and Responses to Clinical Treatment in Children With Atopic Dermatitis
Cited by: 8
Author(s): Ying Liu, Shan Wang, Wenkui Dai, Yuan Liang, Chunping Shen, Lili Li, Lei Jiao, Yawei Bian, Zhan Gao, Yinhu Li, Dongfang Li, Shuai Cheng Li, Martin J. Blaser, Yi Tang, Lin Ma
Software Mentions: 3
Published: almost 6 years ago

10.3389/fcimb.2019.00409

Gut Microbiota Dysbiosis and Increased Plasma LPS and TMAO Levels in Patients With Preeclampsia
Cited by: 81
Author(s): Jing Wang, Xunke Gu, Jing Yang, Yuan Wei, Yangyu Zhao
Software Mentions: 3
Published: over 6 years ago

10.3389/fcimb.2018.00420

Ascitic Bacterial Composition Is Associated With Clinical Outcomes in Cirrhotic Patients With Culture-Negative and Non-neutrocytic Ascites
Cited by: 11
Author(s): Yanfei Chen, Jing Guo, Ding Shi, Daiqiong Fang, Chunlei Chen, Lanjuan Li
Software Mentions: 3
Published: over 7 years ago

10.3389/fcimb.2020.617998

High-Resolution Mapping of Transcription Initiation in the Asexual Stages of Toxoplasma gondii
Cited by: 9
Author(s): Benedikt M. Markus, Benjamin S. Waldman, Hernan Lorenzi, Sebastian Lourido
Software Mentions: 3
Published: over 5 years ago

10.3389/fendo.2021.721812

A Novel Diagnostic Predictive Model for Idiopathic Short Stature in Children
Cited by: 4
Author(s): Jinghong Yuan, Du Zhi, Zhiwen Wu, Yanqin Yang, Xigao Cheng, Xijuan Liu, Jingyu Jia
Software Mentions: 3
Published: almost 5 years ago

10.3389/fgene.2014.00250

Phenome-wide association studies demonstrating pleiotropy of genetic variants within FTO with and without adjustment for body mass index
Cited by: 60
Author(s): Robert M. Cronin, Julie R. Field, Yuki Bradford, Christian M. Shaffer, Robert J. Carroll, Jonathan D. Mosley, Lisa Bastarache, Todd L. Edwards, Scott J. Hebbring, Simon Lin, Lucia A. Hindorff, Paul K. Crane, Sarah A. Pendergrass, Marylyn D. Ritchie, Dana C. Crawford, Jyotishman Pathak, Suzette J. Bielinski, David Carrell, David R. Crosslin, David H. Ledbetter, David J. Carey, Gerard Tromp, Marc S. Williams, Eric B. Larson, Gail P. Jarvik, Peggy L. Peissig, Murray H. Brilliant, Catherine A. McCarty, Christopher G. Chute, Iftikhar J. Kullo, Erwin Böttinger, Rex L. Chisholm, Maureen E. Smith, Dan M. Roden, Joshua C. Denny
Software Mentions: 3
Published: almost 12 years ago

10.3389/fgene.2021.639905

Association Between Environmental Factors and Asthma Using Mendelian Randomization: Increased Effect of Body Mass Index on Adult-Onset Moderate-to-Severe Asthma Subtypes
Cited by: 6
Author(s): Tae‐Woong Ha, Hae-Un Jung, Dong Jun Kim, Eun Ju Baek, Wonjun Lee, Ji Eun Lim, Han-Kyul Kim, Ji‐One Kang, Bermseok Oh
Software Mentions: 3
Published: about 5 years ago

10.3389/fgene.2020.634195

A Novel Framework to Predict Breast Cancer Prognosis Using Immune-Associated LncRNAs
Cited by: 8
Author(s): Zhijian Huang, Xiao Chen, Fushou Zhang, Zhifeng Zhou, Liang Yu, Changsheng Ye, Weiwei Huang, Nani Li
Software Mentions: 3
Published: over 5 years ago

10.3389/fgene.2020.589076

Identification of mRNAs and lncRNAs Involved in the Regulation of Follicle Development in Goat
Cited by: 7
Author(s): Zhifeng Zhao, Xian Zou, Tingting Lu, Ming Deng, Yaokun Li, Yongqing Guo, Baoli Sun, Guangbin Liu, Dewu Liu
Software Mentions: 3
Published: over 5 years ago

10.3389/fgene.2019.00660

Patterns of Geographical and Potential Adaptive Divergence in the Genome of the Common Carp (Cyprinus carpio)
Cited by: 12
Author(s): Jian Xu, Yanliang Jiang, Zixia Zhao, Hanyuan Zhang, Wenzhu Peng, Jianxin Feng, Chuanju Dong, Baohua Chen, Ruyu Tai, Peng Xu
Software Mentions: 3
Published: almost 7 years ago

10.3389/fgene.2020.566928

A Five-Gene-Pair-Based Prognostic Signature for Predicting the Relapse Risk of Early Stage ER+ Breast Cancer
Cited by: 2
Author(s): Na Li, Hao Cai, Kai Song, You Guo, Qirui Liang, Jiahui Zhang, Rou Chen, Jing Li, Xianlong Wang, Zheng Guo
Software Mentions: 3
Published: over 5 years ago

10.3389/fgene.2021.671585

Upregulation of LIMK1 Is Correlated With Poor Prognosis and Immune Infiltrates in Lung Adenocarcinoma
Cited by: 12
Author(s): Gui-Fu Lu, Ying Zhou, Chenxi Zhang, Yu Zhang
Software Mentions: 3
Published: about 5 years ago

10.3389/fgene.2020.00922

Sperm DNA Hypomethylation Proximal to Reproduction Pathway Genes in Maturing Elite Norwegian Red Bulls
Cited by: 8
Author(s): Abdolrahman Khezri, Birgitte Narud, Else‐Berit Stenseth, Teklu Tewoldebrhan Zeremichael, Frøydis Deinboll Myromslien, Robert Wilson, Rafi Ahmad, Elisabeth Kommisrud
Software Mentions: 3
Published: almost 6 years ago

10.3389/fgene.2018.00263

A Multilocus Approach to Understanding Historical and Contemporary Demography of the Keystone Floodplain Species Colossoma macropomum (Teleostei: Characiformes)
Cited by: 9
Author(s): Maria da Conceição Freitas Santos, Tomas Hrbek, Izeni Pires Farias
Software Mentions: 3
Published: almost 8 years ago

10.3389/fimmu.2021.706432

Serum C-Reactive Protein and Periodontitis: A Systematic Review and Meta-Analysis
Cited by: 42
Author(s): Vanessa Machado, Cláudia Escalda, Syed Basit Hussain, Shailly Luthra, Paulo Mascarenhas, Marco Orlandi, José João Mendes, Francesco D’Aiuto
Software Mentions: 3
Published: almost 5 years ago

10.3389/fimmu.2021.717832

Key Gene and Functional Pathways Identified in Unexplained Recurrent Spontaneous Abortion Using Targeted RNA Sequencing and Clinical Analysis
Cited by: 8
Author(s): Heng Gu, Longyu Li, Meng‐Xuan Du, Hang Xu, Mengge Gao, Xiaohua Liu, Xiangcai Wei, Xingming Zhong
Software Mentions: 3
Published: almost 5 years ago

10.3389/fimmu.2021.649475

Genome-Wide Gene Expression Analysis of Mtb-Infected DC Highlights the Rapamycin-Driven Modulation of Regulatory Cytokines via the mTOR/GSK-3β Axis
Cited by: 3
Author(s): Marilena P. Etna, Martina Severa, Valerio Licursi, Manuela Pardini, Melania Cruciani, Fabiana Rizzo, Elena Giacomini, Gianfranco Macchia, Orazio Palumbo, Raffaella Stallone, Massimo Carella, Mark Livingstone, Rodolfo Negri, Sandra Pellegrini, Eliana M. Coccia
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2021.590532

Hypoxia Routes Tryptophan Homeostasis Towards Increased Tryptamine Production
Cited by: 6
Author(s): Soumya R. Mohapatra, Ahmed Sadik, Suraj Sharma, Gernot Poschet, Hagen M. Gegner, Tobias V. Lanz, Philippe Lucarelli, Ursula Klingmüller, Michael Platten, Ines Heiland, Christiane A. Opitz
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2021.726472

Endocervical Regulatory T Cells Are Associated With Decreased Genital Inflammation and Lower HIV Target Cell Abundance
Cited by: 6
Author(s): Aloysious Ssemaganda, François Cholette, Michelle Perner, Cheli Kambaran, Wendy Adhiambo, Peter M. Wambugu, Henok Gebrebrhan, Amy Lee, Faisal Nuhu, Ruth S. Mwatelah, Naima Jahan, Tosin Omole, Tabitha Wanjiru, Apollo Gitau, Joshua Kimani, Lyle R. McKinnon
Software Mentions: 3
Published: almost 5 years ago

10.3389/fimmu.2020.598636

Early Cytokine Induction Upon Pseudomonas aeruginosa Infection in Murine Precision Cut Lung Slices Depends on Sensing of Bacterial Viability
Cited by: 11
Author(s): Ulrike Kolbe, Buqing Yi, Tanja Poth, Amy E. Saunders, Sébastien Boutin, Alexander H. Dalpke
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2021.687151

Integrative Transcriptomic Analysis Reveals the Immune Mechanism for a CyHV-3-Resistant Common Carp Strain
Cited by: 11
Author(s): Zhiying Jia, Nan Wu, Xiaona Jiang, Heng Li, Jing Sun, Minjun Shi, Chitao Li, Yuejing Ge, Xuesong Hu, Weidong Ye, Ying Tang, Junwei Shan, Yingyin Cheng, Xiao-Qin Xia, Shi Liu
Software Mentions: 3
Published: almost 5 years ago

10.3389/fimmu.2020.01218

Pan-Cancer Analysis of Immune Cell Infiltration Identifies a Prognostic Immune-Cell Characteristic Score (ICCS) in Lung Adenocarcinoma
Cited by: 102
Author(s): Shuguang Zuo, Min Wei, Shiqun Wang, Jie Dong, Jiwu Wei
Software Mentions: 3
Published: almost 6 years ago

10.3389/fimmu.2019.02762

Hypoxia Inducible Factor 1α Inhibits the Expression of Immunosuppressive Tryptophan-2,3-Dioxygenase in Glioblastoma
Cited by: 21
Author(s): Soumya R. Mohapatra, Ahmed Sadik, Lars-Oliver Tykocinski, Jörn Dietze, Gernot Poschet, Ines Heiland, Christiane A. Opitz
Software Mentions: 3
Published: over 6 years ago

10.3389/fimmu.2017.00723

Unperturbed Cytotoxic Lymphocyte Phenotype and Function in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Patients
Cited by: 15
Author(s): Jakob Theorell, Indrė Bilevičiūtė-Ljungar, Bianca Tesi, Heinrich Schlums, Mette Sophie Johnsgaard, Babak Asadi-Azarbaijani, Elin Bolle Strand, Yenan T. Bryceson
Software Mentions: 3
Published: almost 9 years ago

10.3389/fimmu.2021.703846

Identification of Novel Low-Density Neutrophil Markers Through Unbiased High-Dimensional Flow Cytometry Screening in Non-Small Cell Lung Cancer Patients
Cited by: 11
Author(s): Paulina Valadez-Cosmes, Kathrin Maitz, Oliver Kindler, Sofia Raftopoulou, Melanie Kienzl, Ana Santiso, Zala Nikita Mihalič, Luka Brčić, Jörg Lindenmann, Melanie Fediuk, Martin Pichler, Rudolf Schicho, A. McGarry Houghton, Ákos Heinemann, Julia Kargl
Software Mentions: 3
Published: almost 5 years ago

10.3389/fimmu.2021.728669

CD49a Identifies Polyfunctional Memory CD8 T Cell Subsets that Persist in the Lungs After Influenza Infection
Cited by: 11
Author(s): Emma Reilly, Mike Sportiello, Kris Lambert Emo, Andrea M. Amitrano, Rakshanda Jha, Ashwin B. R. Kumar, Nathan Laniewski, Hongmei Yang, Min‐Soo Kim, David J. Topham
Software Mentions: 3
Published: almost 5 years ago

10.3389/fimmu.2019.00660

High-Quality Library Preparation for NGS-Based Immunoglobulin Germline Gene Inference and Repertoire Expression Analysis
Cited by: 47
Author(s): Néstor Vázquez Bernat, Martin Corcoran, Uta Hardt, Mateusz Kaduk, Ganesh E. Phad, Marcel Martin, Gunilla B. Karlsson Hedestam
Software Mentions: 3
Published: about 7 years ago

10.3389/fimmu.2020.611522

NK Cell Subsets Changes in Partial Remission and Early Stages of Pediatric Type 1 Diabetes
Cited by: 10
Author(s): Laia Gomez-Muñoz, David Perna-Barrull, Adrian Villalba, Silvia Rodríguez-Fernández, Rosa-Maria Ampudia, Aina Teniente-Serra, Federico Vázquez, Marta Murillo, J. Martínez Pérez, Raquel Corripio, Joan Bel, Marta Vives-Pi
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2020.596303

Thymoproteasome-Expressing Mesenchymal Stromal Cells Confer Protective Anti-Tumor Immunity via Cross-Priming of Endogenous Dendritic Cells
Cited by: 8
Author(s): Jean-Pierre Bikorimana, Nehmé El-Hachem, Abed El-Hakim El-Kadiry, Jamilah Abusarah, Natasha Salame, Riam Shammaa, Moutih Rafei
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2021.599512

Profiles of Immune Cell Infiltration in Carotid Artery Atherosclerosis Based on Gene Expression Data
Cited by: 11
Author(s): Long Wang, Beibei Gao, Mingyue Wu, Wei Yuan, Ping Liang, Jinyu Huang
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2019.01177

Differential Pathogenic Th17 Profile in Mesenteric Lymph Nodes of Crohn's Disease and Ulcerative Colitis Patients
Cited by: 34
Author(s): Marwa Bsat, Laurence Chapuy, Manuel Rubio, Ramsès Wassef, Carole Richard, Frank Schwenter, Rasmy Loungnarath, Geneviève Soucy, Heena Mehta, Marika Sarfati
Software Mentions: 3
Published: about 7 years ago

10.3389/fimmu.2020.618685

Distinct Features and Functions of Systemic and Mucosal Humoral Immunity Among SARS-CoV-2 Convalescent Individuals
Cited by: 75
Author(s): Savannah E. Butler, Andrew R. Crowley, Harini Natarajan, Shiwei Xu, Joshua A. Weiner, Carly A. Bobak, Daniel Mattox, Jiwon Lee, Wendy Wieland-Alter, Ruth I. Connor, Peter F. Wright, Margaret E. Ackerman
Software Mentions: 3
Published: over 5 years ago

10.3389/fmed.2021.693188

Synbiotic Therapy Prevents Nosocomial Infection in Critically Ill Adult Patients: A Systematic Review and Network Meta-Analysis of Randomized Controlled Trials Based on a Bayesian Framework
Cited by: 8
Author(s): Cong Liu, Ling Liu, Zhiwei Gao, Junwei Zhang, Hui Chen, Shaolei Ma, Airan Liu, Min Mo, Changde Wu, Dongyu Chen, Songqiao Liu, Jianfeng Xie, Yingzi Huang, Haibo Qiu, Yi Yang
Software Mentions: 3
Published: almost 5 years ago

10.3389/fmed.2021.667525

FABP5, a Novel Immune-Related mRNA Prognostic Marker and a Target of Immunotherapy for Multiple Myeloma
Cited by: 7
Author(s): Haipeng Jia, Xiaofen Zhang, Xinxin Liu, Ruifang Qiao, Yan Liu, Sulong Lv, Hongbo Zhu, Jie Wang, Qiuhong Kong, Hong Zhang, Zhirong Zhang
Software Mentions: 3
Published: about 5 years ago

10.3389/fmed.2020.00556

Expression Pattern and Prognostic Value of Key Regulators for m6A RNA Modification in Hepatocellular Carcinoma
Cited by: 12
Author(s): Lele Zhang, Yiting Qiao, Jiacheng Huang, Dalong Wan, Lin Zhou, Shigang Lin, Shusen Zheng
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmed.2020.00332

Lung Involvement in Primary Sjögren's Syndrome—An Under-Diagnosed Entity
Cited by: 23
Author(s): Georgios Sogkas, Stefanie Hirsch, Karen M. Olsson, Jan B. Hinrichs, Thea Thiele, Tabea Seeliger, Thomas Skripuletz, Reinhold Schmidt, Torsten Witte, Alexandra Jablonka, Diana Ernst
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmed.2020.594769

Genetic Variation in Neisseria meningitidis Does Not Influence Disease Severity in Meningococcal Meningitis
Cited by: 7
Author(s): Philip H. C. Kremer, John A. Lees, Bart Ferwerda, Arie van de Ende, Matthijs C. Brouwer, Stephen D. Bentley, Diederik van de Beek
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2020.01847

Oceanographic Fronts Shape Phaeocystis Assemblages: A High-Resolution 18S rRNA Gene Survey From the Ice-Edge to the Equator of the South Pacific
Cited by: 14
Author(s): Swan Li San Sow, Thomas W. Trull, Levente Bodrossy
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2020.01936

Soil Microbiomes With the Genetic Capacity for Atmospheric Chemosynthesis Are Widespread Across the Poles and Are Associated With Moisture, Carbon, and Nitrogen Limitation
Cited by: 17
Author(s): Angelique E. Ray, Eden Zhang, Aleks Terauds, Mukan Ji, Weidong Kong, Belinda C. Ferrari
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2020.00968

Pea (Pisum sativum l.) Plant Shapes Its Rhizosphere Microbiome for Nutrient Uptake and Stress Amelioration in Acidic Soils of the North-East Region of India
Cited by: 20
Author(s): Diptaraj Chaudhari, Krishnappa Rangappa, Anup Das, Jayanta Layek, S. Basavaraj, B.K. Kandpal, Yogesh S. Shouche, Praveen Rahi
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2021.667832

Nasal and Fecal Microbiota and Immunoprofiling of Infants With and Without RSV Bronchiolitis
Cited by: 8
Author(s): Claudio Alba, Marina Aparicio, Felipe González‐Martínez, María-Isabel González-Sánchez, Jimena Pérez-Moreno, Blanca Toledo del Castillo, Juan Miguel Díaz Rodríguez, Rosa Rodríguez‐Fernández, Leónides Fernández
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2019.02687

Effect of Diet on the Enteric Microbiome of the Wood-Eating Catfish Panaque nigrolineatus
Cited by: 9
Author(s): Ryan McDonald, Joy E. M. Watts, Harold J. Schreier
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2020.01106

Gut Microbiota-Based Algorithms in the Prediction of Metachronous Adenoma in Colorectal Cancer Patients Following Surgery
Cited by: 11
Author(s): Liu Yang, Rui Geng, Lujia Liu, Xiangren Jin, Yan Wang, Fuya Zhao, Shuang Wang, Xing Guo, Ghanashyam Ghimire, Yunwei Wei
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2019.02576

Microbiome of Co-cultured Fish Exhibits Host Selection and Niche Differentiation at the Organ Scale
Cited by: 23
Author(s): Zhimin Zhang, Dapeng Li, Weigang Xu, Rong Tang, Li Li
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2021.625857

Fermented Soybean Meal Replacement in the Diet of Lactating Holstein Dairy Cows: Modulated Rumen Fermentation and Ruminal Microflora
Cited by: 11
Author(s): Wang Zuo, Yuannian Yu, Xinyao Li, Hongyan Xiao, Peihua Zhang, Weijun Shen, Fachun Wan, Jianhua He, Shaoxun Tang, Zhiliang Tan, Duanqin Wu, Hui Yao
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2020.00548

Genomic and Phenotypic Analyses of Acinetobacter baumannii Isolates From Three Tertiary Care Hospitals in Thailand
Cited by: 24
Author(s): Jessica Loraine, Eva Heinz, Rosesathorn Soontarach, Grace A. Blackwell, Richard A. Stabler, Supayang Piyawan Voravuthikunchai, Potjanee Srimanote, Pattarachai Kiratisin, Nicholas R. Thomson, Peter W. Taylor
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2020.01823

Contrasting Responses of Protistan Plant Parasites and Phagotrophs to Ecosystems, Land Management and Soil Properties
Cited by: 23
Author(s): Anna Maria Fiore‐Donno, Tim Richter-Heitmann, Michael Bonkowski
Software Mentions: 3
Published: almost 6 years ago

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