cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3389/fimmu.2020.595877

Gene Networks Underlying the Resistance of Bifidobacterium longum to Inflammatory Factors
Cited by: 5
Author(s): Vladimir A. Veselovsky, Marina S. Dyachkova, Egor Menyailo, Polina S. Polyaeva, Evgenii I. Olekhnovich, Egor Shitikov, Dmitry Bespiatykh, Tatiana A. Semashko, Artem S. Kasianov, Elena N. Ilina, В Н Даниленко, Ksenia M. Klimina
Software Mentions: 3
Published: almost 6 years ago

10.3389/fimmu.2021.700152

Single-Cell Transcriptomic Profiling of MAIT Cells in Patients With COVID-19
Cited by: 16
Author(s): Jiandang Shi, Jianglin Zhou, Xiaochang Zhang, Wei Hu, Jinfang Zhao, Shengqi Wang, Fusheng Wang, Jiyuan Zhang
Software Mentions: 3
Published: about 5 years ago

10.3389/fimmu.2021.677169

ERO1L Is a Novel and Potential Biomarker in Lung Adenocarcinoma and Shapes the Immune-Suppressive Tumor Microenvironment
Cited by: 9
Author(s): L. Liu, Chao Wang, Sini Li, Yan Qu, Ping Xue, Zixiao Ma, Xue Zhang, Hua Bai, Jie Wang
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2020.586476

Akkermansia muciniphila Improves Host Defense Against Influenza Virus Infection
Cited by: 24
Author(s): Xiaoru Hu, Ya Zhao, Yong Yang, Wenxiao Gong, Xiaomei Sun, Li Yang, Qiang Zhang, Meilin Jin
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2020.00154

Ecological Differentiation in Two Major Freshwater Bacterial Taxa Along Environmental Gradients
Cited by: 15
Author(s): Julia K. Nuy, Matthias Hoetzinger, Martin W. Hahn, Daniela Beißer, Jens Boenigk
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2020.00082

Comparative Genomic Analysis of a Novel Strain of Taiwan Hot-Spring Cyanobacterium Thermosynechococcus sp. CL-1
Cited by: 25
Author(s): Yen I. Cheng, Li-Dek Chou, Yi Fang Chiu, Hsin Ta Hsueh, Chih Horng Kuo, Hsiu-An Chu
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2018.03335

Microbial-Driven Butyrate Regulates Jejunal Homeostasis in Piglets During the Weaning Stage
Cited by: 33
Author(s): Xi Zhong, Zhongwei Zhang, Shujin Wang, Lili Cao, Lin Zhou, Aomin Sun, Zhendong Zhong, Miranda Nabben
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2020.541554

An Improved hgcAB Primer Set and Direct High-Throughput Sequencing Expand Hg-Methylator Diversity in Nature
Cited by: 28
Author(s): Caitlin M. Gionfriddo, Ann M. Wymore, Daniel S. Jones, Regina L. Wilpiszeski, Mackenzie M. Lynes, Geoff A. Christensen, Ally Soren, Cynthia C. Gilmour, Mircea Podar, Dwayne A. Elias
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2020.00932

Impact of Microbiota Transplant on Resistome of Gut Microbiota in Gnotobiotic Piglets and Human Subjects
Cited by: 10
Author(s): Liu Hu, Hua H. Wang
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2020.570960

Gut Bacteriome Analysis of Anastrepha fraterculus sp. 1 During the Early Steps of Laboratory Colonization
Cited by: 5
Author(s): Julieta Salgueiro, Lida E. Pimper, Diego Fernando Segura, Fabián Horacio Milla, Romina Russo, Elias Asimakis, Panagiota Stathopoulou, Kostas Bourtzis, Jorge Luis Cladera, George Tsiamis, Silvia Beatriz Lanzavecchia
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2021.687533

Biosorption of Copper in Swine Manure Using Aspergillus and Yeast: Characterization and Its Microbial Diversity Study
Cited by: 1
Author(s): Yongkang Zhen, Mengzhi Wang, Yinmin Gu, Xiao Yu, Khuram Shahzad, Jun Xu, Yuqing Gong, Peizhen Li, Juan J. Loor
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2021.707281

Comparative Mitogenomic Analysis and the Evolution of Rhizoctonia solani Anastomosis Groups
Cited by: 3
Author(s): Runmao Lin, Y. L. Xia, Yao Liu, Danhua Zhang, Xiang Xiao, Xianyu Niu, Linjia Jiang, Xiaolin Wang, Aiping Zheng
Software Mentions: 3
Published: almost 5 years ago

10.3389/fmicb.2018.02327

Relationships Between Fungal and Plant Communities Differ Between Desert and Grassland in a Typical Dryland Region of Northwest China
Cited by: 15
Author(s): Jianming Wang, Chen Chen, Ziqi Ye, Jingwen Li, Feng Yin, Qi Lu
Software Mentions: 3
Published: almost 8 years ago

10.3389/fmicb.2016.00564

Individuality, Stability, and Variability of the Plaque Microbiome
Cited by: 69
Author(s): Daniel R. Utter, Jessica L. Mark Welch, Gary G. Borisy
Software Mentions: 3
Published: over 10 years ago

10.3389/fmicb.2021.649594

Temporal Microbial Community Dynamics Within a Unique Acid Saline Lake
Cited by: 2
Author(s): Noor-Ul-Huda Ghori, Michael J. Wise, Andrew S. Whiteley
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2015.01300

Forest Management Type Influences Diversity and Community Composition of Soil Fungi across Temperate Forest Ecosystems
Cited by: 117
Author(s): Kezia Goldmann, Ingo Schöning, François Buscot, Tesfaye Wubet
Software Mentions: 3
Published: over 10 years ago

10.3389/fmicb.2020.564160

High-Fat Diets Led to OTU-Level Shifts in Fecal Samples of Healthy Adult Dogs
Cited by: 8
Author(s): Logan Kilburn, Lucas R Koester, Stephan Schmitz‐Esser, Nick V. L. Serão, Mariana C Rossoni Serão
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2021.651282

Root Exudates Alter the Expression of Diverse Metabolic, Transport, Regulatory, and Stress Response Genes in Rhizosphere Pseudomonas
Cited by: 46
Author(s): Olga V. Mavrodi, Janiece R. McWilliams, Jacob Peter, Anna Berim, Karl A. Hassan, Liam D. H. Elbourne, Melissa K. LeTourneau, David R. Gang, Ian T. Paulsen, David M. Weller, Linda S. Thomashow, Alex S. Flynt, Dmitri V. Mavrodi
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2021.690091

Gut and Vagina Microbiota Associated With Estrus Return of Weaning Sows and Its Correlation With the Changes in Serum Metabolites
Cited by: 5
Author(s): Jia Zhong, Min Liu, Shanlin Ke, Xiaowan Huang, Shouguo Fang, Maozhang He, Hao Fu, Congying Chen, Lusheng Huang
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2017.02699

Preliminary Comparison of Oral and Intestinal Human Microbiota in Patients with Colorectal Cancer: A Pilot Study
Cited by: 78
Author(s): Edda Russo, Giovanni Bacci, Carolina Chiellini, Camilla Fagorzi, Elena Niccolai, Antonio Taddei, Francesca Ricci, Maria Novella Ringressi, Rossella Borrelli, Filippo Melli, Manouela Miloeva, Paolo Bechi, Alessio Mengoni, Renato Fani, Amedeo Amedei
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2019.00448

Multiple Recombination Events Drive the Current Genetic Structure of Xanthomonas perforans in Florida
Cited by: 40
Author(s): Sujan Timilsina, Juliana A. Pereira-Martin, Gerald V. Minsavage, Fernanda Iruegas-Bocardo, Peter Abrahamian, Neha Potnis, Bryan Kolaczkowski, Gary E. Vallad, Erica M. Goss, Jeffrey B. Jones
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2020.622824

Genomic Insights Into the Lifestyles of Thaumarchaeota Inside Sponges
Cited by: 11
Author(s): Markus Haber, Ilia Burgsdorf, Kim M. Handley, Maxim Rubin‐Blum, Laura Steindler
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2019.02333

Human Milk Microbiome and Maternal Postnatal Psychosocial Distress
Cited by: 42
Author(s): Pamela D. Browne, Marina Aparicio, Claudio Alba, Christine Hechler, Roseriet Beijers, Juan M. Rodríguez, Leónides Fernández, Carolina de Weerth
Software Mentions: 3
Published: almost 7 years ago

10.3389/fmicb.2021.683410

Integrated Metagenomic Assessment of Multiple Pre-harvest Control Points on Lettuce Resistomes at Field-Scale
Cited by: 4
Author(s): Lauren Wind, Ishi Keenum, Suraj Gupta, Partha Pratim Ray, Katharine F. Knowlton, Monica A. Ponder, W. Cully Hession, Amy Pruden, Leigh‐Anne Krometis
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2018.00176

Occurrence of Harmful Cyanobacteria in Drinking Water from a Severely Drought-Impacted Semi-arid Region
Cited by: 38
Author(s): Juline M. Walter, Fabyano Álvares Cardoso Lopes, Mônica Lopes-Ferreira, Leonardo Vidal, Luciana Leomil, Fabiana Cristina Silveira Alves de Melo, Girlene S. de Azevedo, Rossandra M. S. Oliveira, Alba J. Medeiros, Adriana Melo, Carlos Eduardo de Rezende, Amílcar Tanuri, Fabiano L. Thompson
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2021.724042

Transcriptomic Profile of Mycobacterium smegmatis in Response to an Imidazo[1,2-b][1,2,4,5]tetrazine Reveals Its Possible Impact on Iron Metabolism
Cited by: 0
Author(s): Aleksey A. Vatlin, Egor Shitikov, Mohd Shahbaaz, Dmitry Bespiatykh, Ksenia M. Klimina, Alan Christoffels, В. Н. Даниленко, Д. А. Маслов
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2018.03192

Predictable Molecular Adaptation of Coevolving Enterococcus faecium and Lytic Phage EfV12-phi1
Cited by: 29
Author(s): Stephen Wandro, Andrew Oliver, Tara Gallagher, Claudia Weihe, Whitney England, Jennifer B. H. Martiny, Katrine Whiteson
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2020.612344

Dynamics and Complexity of Dark Fermentation Microbial Communities Producing Hydrogen From Sugar Beet Molasses in Continuously Operating Packed Bed Reactors
Cited by: 16
Author(s): Anna Detman, Daniel Laubitz, Aleksandra Chojnacka, Ewa Wiktorowska-Sowa, Jan Piotrowski, Agnieszka Salamon, Wiktor Kaźmierczak, Mieczysław Błaszczyk, Albert Barberán, Yongjian Chen, Ewa Łupikasza, Fei Yang, Anna Sikora
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2020.01579

Contribution of Viral Genomic Diversity to Oyster Susceptibility in the Pacific Oyster Mortality Syndrome
Cited by: 12
Author(s): Jean Delmotte, Cristian Chaparro, Richard Galinier, Julien de Lorgeril, Bruno Petton, Pierre‐Louis Stenger, Jérémie Vidal-Dupiol, D. Destoumieux-Garzón, Yannick Gueguen, Caroline Montagnani, Jean-Michel Escoubas, Guillaume Mitta
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2020.01950

Discovery of an Abundance of Biosynthetic Gene Clusters in Shark Bay Microbial Mats
Cited by: 36
Author(s): Ray Chen, Hon Lun Wong, Gareth Kindler, Fraser Iain MacLeod, Nicole Benaud, Belinda C. Ferrari, Brendan P. Burns
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2019.01617

Reconditioning Degraded Mine Site Soils With Exogenous Soil Microbes: Plant Fitness and Soil Microbiome Outcomes
Cited by: 25
Author(s): Benjamin Moreira‐Grez, Miriam Muñoz‐Rojas, Khalil Kariman, Paul Storer, Anthony G. O'Donnell, Deepak Kumaresan, Andrew S. Whiteley
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2019.02410

Skin Exposure to Narrow Band Ultraviolet (UVB) Light Modulates the Human Intestinal Microbiome
Cited by: 72
Author(s): Else S. Bosman, Arianne Albert, Harvey Lui, Jan P. Dutz, Bruce A. Vallance
Software Mentions: 3
Published: almost 7 years ago

10.3389/fmicb.2020.581926

Gut Microbiological Disorders Reduce Semen Utilization Rate in Duroc Boars
Cited by: 11
Author(s): Liangliang Guo, Yinghui Wu, Chao Wang, Hongkui Wei, Jiajian Tan, Haiqing Sun, Siwen Jiang, Jian Peng
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2020.619968

Evidence for Proline Utilization by Oral Bacterial Biofilms Grown in Saliva
Cited by: 7
Author(s): Leanne Cleaver, Rebecca Moazzez, Guy Carpenter
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2021.631250

Adaptive Gene Content and Allele Distribution Variations in the Wild and Domesticated Populations of Saccharomyces cerevisiae
Cited by: 12
Author(s): Dayong Han, Pei‐Jie Han, Karl Rumbold, Anbessa Dabassa Koricha, Shoufu Duan, Liang Song, Junyan Shi, Kuan Li, Qiming Wang, Feng‐Yan Bai
Software Mentions: 3
Published: over 5 years ago

10.3389/fmolb.2021.720370

Hydroxychloroquine Induces Apoptosis in Cholangiocarcinoma via Reactive Oxygen Species Accumulation Induced by Autophagy Inhibition
Cited by: 8
Author(s): Jiaqi Chen, Qiaoya Pan, Yang Bai, Xuepeng Chen, Yi Zhou
Software Mentions: 3
Published: almost 5 years ago

10.3389/fnmol.2019.00171

Gut Microbiota Differs Between Parkinson’s Disease Patients and Healthy Controls in Northeast China
Cited by: 89
Author(s): Chunxiao Li, Li Cui, Yimin Yang, Miao Jin, Xuerong Zhao, Jingdian Zhang, Chongye Guo, Ying Zhang
Software Mentions: 3
Published: about 7 years ago

10.3389/fnmol.2018.00454

Effects of APOE Genotype on Brain Proteomic Network and Cell Type Changes in Alzheimer's Disease
Cited by: 48
Author(s): Jingting Dai, Erik C. B. Johnson, Eric B. Dammer, Duc M. Duong, Marla Gearing, James J. Lah, Aĺlan I. Levey, Thomas S. Wingo, Nicholas T. Seyfried
Software Mentions: 3
Published: over 7 years ago

10.3389/fnmol.2021.701977

Expression Analysis of Ermin and Listerin E3 Ubiquitin Protein Ligase 1 Genes in Autistic Patients
Cited by: 5
Author(s): Shadi Shiva, Jalal Gharesouran, Hani Sabaie, Mohammad Reza Asadi, Shahram Arsang‐Jang, Mohammad Taheri, Maryam Rezazadeh
Software Mentions: 3
Published: about 5 years ago

10.3389/fneur.2017.00210

Impaired Baroreflex Sensitivity after Bilateral Convulsive Seizures in Patients with Focal Epilepsy
Cited by: 24
Author(s): Kevin G. Hampel, Christian E. Elger, Rainer Surges
Software Mentions: 3
Published: over 9 years ago

10.3389/fneur.2021.633068

The Cologne Picture Naming Test for Language Mapping and Monitoring (CoNaT): An Open Set of 100 Black and White Object Drawings
Cited by: 2
Author(s): Carolin Weiß Lucas, J. Pieczewski, Sophia Kochs, Charlotte Nettekoven, Christian Grefkes, Roland Goldbrunner, Kristina Jonas
Software Mentions: 3
Published: over 5 years ago

10.3389/fneur.2020.00879

Ocular Vestibular-Evoked Myogenic Potential Amplitudes Elicited at 4 kHz Optimize Detection of Superior Semicircular Canal Dehiscence
Cited by: 9
Author(s): Emma Tran, Austin Swanson, Jeffrey D. Sharon, Yona Vaisbuch, Nikolas H. Blevins, Matthew B. Fitzgerald, Kristen Steenerson
Software Mentions: 3
Published: almost 6 years ago

10.3389/fneur.2020.573575

Differential Glial Activation in Early Epileptogenesis—Insights From Cell-Specific Analysis of DNA Methylation and Gene Expression in the Contralateral Hippocampus
Cited by: 4
Author(s): Toni Berger, Magnus Dehli Vigeland, Hanne Sagsveen Hjorthaug, Cecilie G. Nome, Erik Taubøll, Kaja Kristine Selmer, Kjell Heuser
Software Mentions: 3
Published: almost 6 years ago

10.3389/fneur.2018.00468

Diffusion Tensor Imaging (DTI) Correlates of Self-Reported Sleep Quality and Depression Following Mild Traumatic Brain Injury
Cited by: 29
Author(s): Adam C. Raikes, Sahil Bajaj, Natalie S. Dailey, Ryan Smith, Anna Alkozei, Brieann C. Satterfield, William D.S. Killgore
Software Mentions: 3
Published: about 8 years ago

10.3389/fneur.2019.01252

Neurodegenerative Disease–Associated Variants in TREM2 Destabilize the Apical Ligand-Binding Region of the Immunoglobulin Domain
Cited by: 19
Author(s): Hunter B. Dean, Erik D. Roberson, Yuhua Song
Software Mentions: 3
Published: over 6 years ago

10.3389/fnins.2021.653130

Genetic Overlap Between Alzheimer’s Disease and Depression Mapped Onto the Brain
Cited by: 12
Author(s): Jennifer Monereo Sánchez, Miranda T. Schram, Oleksandr Frei, Kevin O’Connell, Alexey Shadrin, Olav B. Smeland, Lars T. Westlye, Ole A. Andreassen, Tobias Kaufmann, David Linden, Dennis van der Meer
Software Mentions: 3
Published: about 5 years ago

10.3389/fnins.2021.653120

Altered Gut Microbiota in a Fragile X Syndrome Mouse Model
Cited by: 15
Author(s): Francisco Altimiras, José García, Ismael Palacios-García, Michael Hurley, Robert M. J. Deacon, Bernardo González, Patricia Cogram
Software Mentions: 3
Published: about 5 years ago

10.3389/fnins.2019.01093

Auditory, Cognitive, and Linguistic Factors Predict Speech Recognition in Adverse Listening Conditions for Children With Hearing Loss
Cited by: 50
Author(s): Ryan W. McCreery, Elizabeth Walker, Meredith Spratford, Dawna E. Lewis, Marc A. Brennan
Software Mentions: 3
Published: almost 7 years ago

10.3389/fnins.2021.658002

Multiparametric Analysis of Cerebral Development in Preterm Infants Using Magnetic Resonance Imaging
Cited by: 3
Author(s): Marine Dubois, Antoine Legouhy, Isabelle Corouge, Olivier Commowick, Baptiste Morel, Patrick Pladys, Jean-Christophe Ferré, Christian Barillot, Maïa Proisy
Software Mentions: 3
Published: over 5 years ago

10.3389/fnins.2020.491478

Lesion Induced Error on Automated Measures of Brain Volume: Data From a Pediatric Traumatic Brain Injury Cohort
Cited by: 6
Author(s): Daniel King, Jan Novák, Adam Shephard, Richard Beare, Vicki Anderson, Amanda G. Wood
Software Mentions: 3
Published: over 5 years ago

10.3389/fnins.2021.595583

Spatial Memory and Gut Microbiota Alterations Are Already Present in Early Adulthood in a Pre-clinical Transgenic Model of Alzheimer’s Disease
Cited by: 25
Author(s): Paola C. Bello-Medina, Fernando Hernández-Quiroz, Marcel Pérez-Morales, Diego A. González-Franco, Guadalupe Cruz-Pauseno, Jaime García‐Mena, Sofía Díaz‐Cintra, Gustavo Pacheco-López
Software Mentions: 3
Published: over 5 years ago

10.3389/fnut.2021.673316

Effect of Dietary Supplementation With Mixed Organic Acids on Immune Function, Antioxidative Characteristics, Digestive Enzymes Activity, and Intestinal Health in Broiler Chickens
Cited by: 17
Author(s): Jun Ma, Shad Mahfuz, Jian Wang
Software Mentions: 3
Published: about 5 years ago

10.3389/fnut.2021.675640

Methyl-Donor Micronutrient for Gestating Sows: Effects on Gut Microbiota and Metabolome in Offspring Piglets
Cited by: 5
Author(s): Qin He, Tiande Zou, Jun Chen, Jia He, Jian Li, Fei Xie, Jinming You, Zi-Rui Wang
Software Mentions: 3
Published: about 5 years ago

10.3389/fnut.2021.715287

Omega-3 Fatty Acid Fortification of Flax Through Nutri-Priming
Cited by: 3
Author(s): Edward Marques, Heather Darby, Jana Kraft
Software Mentions: 3
Published: about 5 years ago

10.3389/fnut.2021.676035

Effect of Dietary Tryptophan on Growth, Intestinal Microbiota, and Intestinal Gene Expression in an Improved Triploid Crucian Carp
Cited by: 11
Author(s): Yawei Fu, Xiaoxiao Liang, Donghua Li, Gao Hu, Yadong Wang, Wenting Li, Kang Xu, Fangzhou Hu
Software Mentions: 3
Published: about 5 years ago

10.3389/fonc.2020.575261

Multivariable Models Incorporating Multiparametric Magnetic Resonance Imaging Efficiently Predict Results of Prostate Biopsy and Reduce Unnecessary Biopsy
Cited by: 4
Author(s): Shuanbao Yu, Guodong Hong, Tao Jin, Yan Shen, Junxiao Liu, Biao Dong, Yafeng Fan, Ziyao Li, Ali Zhu, Xuepei Zhang
Software Mentions: 3
Published: almost 6 years ago

10.3389/fonc.2021.672228

Progression-Free Survival, Prognostic Factors, and Surgical Outcome of Spheno-Orbital Meningiomas
Cited by: 10
Author(s): Waseem Masalha, Dieter Henrik Heiland, Christine Steiert, Marie T. Krüger, Daniel Schnell, Christian Scheiwe, Oliver Schnell, A.L. Grosu, Jürgen Beck, Juergen Grauvogel
Software Mentions: 3
Published: about 5 years ago

10.3389/fonc.2020.597569

Identification and Validation of an Autophagy-Related lncRNA Signature for Patients With Breast Cancer
Cited by: 13
Author(s): Ruyue Zhang, Qingwen Zhu, Dengke Yin, Zichang Yang, Jiahao Guo, Jingmin Zhang, Yubing Zhou, Jane Yu
Software Mentions: 3
Published: over 5 years ago

10.3389/fonc.2021.691771

Inflammatory Environment Promotes the Adhesion of Tumor Cells to Brain Microvascular Endothelial Cells
Cited by: 4
Author(s): Ke Wang, Shuang Dong, Doaa Higazy, Li-Jing Jin, Qing-Cui Zou, Haowei Chen, Aakif Inayat, Sheng Hu, Min Cui
Software Mentions: 3
Published: about 5 years ago

10.3389/fonc.2021.600243

Identification of Survival-Associated Gene Signature in Lung Cancer Coexisting With COPD
Cited by: 6
Author(s): Ti-Wei Miao, Long-Yi Du, Wei Xiao, Bing Mao, Yan Wang, Juanjuan Fu
Software Mentions: 3
Published: over 5 years ago

10.3389/fonc.2020.554759

Integrated Analysis of lncRNA–Mediated ceRNA Network in Lung Adenocarcinoma
Cited by: 90
Author(s): Xianxian Wu, Zhilin Sui, Hongdian Zhang, Ying Wang, Zhentao Yu
Software Mentions: 3
Published: almost 6 years ago

10.3389/fpls.2020.596581

Characterization, Genetic Analyses, and Identification of QTLs Conferring Metabolic Resistance to a 4-Hydroxyphenylpyruvate Dioxygenase Inhibitor in Sorghum (Sorghum bicolor)
Cited by: 10
Author(s): Balaji Pandian, Aruna Varanasi, Amaranatha R. Vennapusa, Rajendran Sathishraj, Guifang Lin, Mingxia Zhao, Madison Tunnell, Tesfaye Tesso, Sanzhen Liu, P. V. Vara Prasad, Mithila Jugulam
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2020.00757

Fostering Conservation via an Integrated Use of Conventional Approaches and High-Throughput SPET Genotyping: A Case Study Using the Endangered Canarian Endemics Solanum lidii and S. vespertilio (Solanaceae)
Cited by: 10
Author(s): Pietro Gramazio, Ruth Jaén‐Molina, Santiago Vilanova, Jaime Prohens, Águedo Marrero, Juli Caujapé‐Castells, Gregory J. Anderson
Software Mentions: 3
Published: about 6 years ago

10.3389/fpls.2019.01772

Coexpression of PalbHLH1 and PalMYB90 Genes From Populus alba Enhances Pathogen Resistance in Poplar by Increasing the Flavonoid Content
Cited by: 33
Author(s): Qiuxian Bai, Bingbing Duan, Jianchao Ma, Yannan Fen, Shujiao Sun, Qiming Long, Jiaojiao Lv, Dongshi Wan
Software Mentions: 3
Published: over 6 years ago

10.3389/fpls.2021.713667

Breeding With Major and Minor Genes: Genomic Selection for Quantitative Disease Resistance
Cited by: 18
Author(s): Lance F. Merrick, Adrienne B. Burke, Xianming Chen, Arron H. Carter
Software Mentions: 3
Published: about 5 years ago

10.3389/fpls.2015.01247

Genome-Wide Analysis of the AP2/ERF Superfamily Genes and their Responses to Abiotic Stress in Medicago truncatula
Cited by: 84
Author(s): Yongjun Shu, Ying Liu, Jun Zhang, Lili Song, Changhong Guo
Software Mentions: 3
Published: over 10 years ago

10.3389/fpls.2017.01199

Evidence for Active Uptake and Deposition of Si-based Defenses in Tall Fescue
Cited by: 49
Author(s): Emma McLarnon, Simon J. McQueen‐Mason, Ingo Lenk, Susan Hartley
Software Mentions: 3
Published: about 9 years ago

10.3389/fpls.2021.603411

The Effect of Red & Blue Rich LEDs vs Fluorescent Light on Lollo Rosso Lettuce Morphology and Physiology
Cited by: 16
Author(s): Laura Cammarisano, Iain S. Donnison, P. R. H. Robson
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2018.01013

Managing Successional Stage Heterogeneity to Maximize Landscape-Wide Biodiversity of Aquatic Vegetation in Ditch Networks
Cited by: 13
Author(s): Sven Teurlincx, M.J.J.M. Verhofstad, Elisabeth S. Bakker, Steven Declerck
Software Mentions: 3
Published: about 8 years ago

10.3389/fpls.2018.01603

The Beneficial Endophytic Fungus Fusariumsolani Strain K Alters Tomato Responses Against Spider Mites to the Benefit of the Plant
Cited by: 46
Author(s): Maria L. Pappas, Maria Liapoura, Dimitra Papantoniou, Marianna Avramidou, Nektarios Kavroulakis, Alexander Weinhold, George D. Broufas, Kalliope Κ. Papadopoulou
Software Mentions: 3
Published: almost 8 years ago

10.3389/fpls.2018.00060

Inheritance of Mesotrione Resistance in an Amaranthus tuberculatus (var. rudis) Population from Nebraska, USA
Cited by: 22
Author(s): Maxwel C. Oliveira, Todd A. Gaines, Amit J. Jhala, Stevan Z. Knežević
Software Mentions: 3
Published: over 8 years ago

10.3389/fpls.2019.01560

Coordination of Glucosinolate Biosynthesis and Turnover Under Different Nutrient Conditions
Cited by: 36
Author(s): Verena Jeschke, Konrad Weber, Stanley A. Moore, Meike Burow
Software Mentions: 3
Published: over 6 years ago

10.3389/fpls.2020.607859

Evaluating Strategies for Adaptation to Climate Change in Grapevine Production–A Systematic Review
Cited by: 41
Author(s): Audrey Naulleau, Christian Gary, Laurent Prévot, Laure Hossard
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2020.545042

Molecular Evolution and Expansion of the KUP Family in the Allopolyploid Cotton Species Gossypium hirsutum and Gossypium barbadense
Cited by: 3
Author(s): Kai Fan, Zhijun Mao, Jiaxin Zheng, Yunrui Chen, Zhaowei Li, Weiwei Lin, Yongqiang Zhang, Jinwen Huang, Wenxiong Lin
Software Mentions: 3
Published: almost 6 years ago

10.3389/fpls.2021.614926

Analysis of Shoot Architecture Traits in Edamame Reveals Potential Strategies to Improve Harvest Efficiency
Cited by: 4
Author(s): Kshitiz Dhakal, Qian Zhu, Bo Zhang, Mao Li, Song Li
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2018.01347

Genome-Wide Association Mapping in a Rice MAGIC Plus Population Detects QTLs and Genes Useful for Biofortification
Cited by: 74
Author(s): Gwen Iris L. Descalsota, B. P. Mallikarjuna Swamy, Hein Zaw, Mary Ann Inabangan-Asilo, Amery Amparado, Ramil Mauleon, Prabhjit Chadha-Mohanty, Emily C. Arocena, Chitra Raghavan, Hei Leung, Jose E. Hernandez, Antonio G. Lalusin, Merlyn S. Mendioro, Ma. Genaleen Q. Diaz, Russell Reinke
Software Mentions: 3
Published: almost 8 years ago

10.3389/fpls.2018.00869

A Novel and Convenient Method for Early Warning of Algal Cell Density by Chlorophyll Fluorescence Parameters and Its Application in a Highland Lake
Cited by: 21
Author(s): Huan Wang, Rong Zhu, Jia Zhang, Leyi Ni, Hong Shen, Ping Xie
Software Mentions: 3
Published: about 8 years ago

10.3389/fpls.2021.640163

A 598-bp InDel Variation in the Promoter Region of Bna.SOC1.A05 Is Predominantly Present in Winter Type Rapeseeds
Cited by: 1
Author(s): Sarah Matar, Siegbert Melzer
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2019.00647

Aspects of Invasiveness of Ludwigia and Nelumbo in Shallow Temperate Fluvial Lakes
Cited by: 13
Author(s): Viktor R. Tóth, Paolo Villa, Monica Pinardi, Mariano Bresciani
Software Mentions: 3
Published: over 7 years ago

10.3389/fpls.2021.659510

Variation of Morphological, Agronomic and Chemical Composition Traits of Local Hazelnuts Collected in Northern Spain
Cited by: 5
Author(s): Ana Čampa, Roberto Rodríguez Madrera, Belén Suárez Valles, Juan José Ferreira Fernández
Software Mentions: 3
Published: about 5 years ago

10.3389/fpls.2017.02022

Rhizosphere Microbiome Recruited from a Suppressive Compost Improves Plant Fitness and Increases Protection against Vascular Wilt Pathogens of Tomato
Cited by: 72
Author(s): Anastasis Antoniou, Maria-Dimitra Tsolakidou, Ioannis A. Stringlis, Iakovos S. Pantelides
Software Mentions: 3
Published: over 8 years ago

10.3389/fpls.2019.01102

Factors Affecting Targeted Sequencing of 353 Nuclear Genes From Herbarium Specimens Spanning the Diversity of Angiosperms
Cited by: 93
Author(s): Grace E. Brewer, James J. Clarkson, Olivier Maurin, Alexandre R. Zuntini, Vanessa Barber, Sidonie Bellot, Nicola Biggs, Robyn S. Cowan, Nina M. Davies, Steven Dodsworth, Sara L. Edwards, Wolf L. Eiserhardt, Niroshini Epitawalage, Sue Frisby, Aurélie Grall, Paul J. Kersey, Lisa Pokorny, Ilia J. Leitch, Félix Forest, William J. Baker
Software Mentions: 3
Published: almost 7 years ago

10.3389/fpls.2021.655673

Exploring Biocontrol Agents From Microbial Keystone Taxa Associated to Suppressive Soil: A New Attempt for a Biocontrol Strategy
Cited by: 34
Author(s): Yanfen Zheng, Xiaobin Han, Dong‐Lin Zhao, Keke Wei, Yuan Yuan, Yiqiang Li, Minghong Liu, Chengsheng Zhang
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2019.01396

Desiccation-Driven Senescence in the Resurrection Plant Xerophyta schlechteri (Baker) N.L. Menezes: Comparison of Anatomical, Ultrastructural, and Metabolic Responses Between Senescent and Non-Senescent Tissues
Cited by: 19
Author(s): Astrid Lillie Radermacher, S. Francois du Toit, Jill M. Farrant
Software Mentions: 3
Published: almost 7 years ago

10.3389/fpls.2017.00053

Dissecting the Biochemical and Transcriptomic Effects of a Locally Applied Heat Treatment on Developing Cabernet Sauvignon Grape Berries
Cited by: 83
Author(s): Fatma Lecourieux, Christian Kappel, Philippe Pieri, Justine Charon, Jérémy Pillet, Ghislaine Hilbert, Christel Renaud, Éric Gomès, Serge Delrot, David Lecourieux
Software Mentions: 3
Published: over 9 years ago

10.3389/fpls.2020.614618

Predominance of Metabolic Resistance in a Six-Way-Resistant Palmer Amaranth (Amaranthus palmeri) Population
Cited by: 23
Author(s): Chandrima Shyam, Ednaldo Alexandre Borgato, Dallas E. Peterson, J. Anita Dille, Mithila Jugulam
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2017.01331

A Novel Multivariate Approach to Phenotyping and Association Mapping of Multi-Locus Gametophytic Self-Incompatibility Reveals S, Z, and Other Loci in a Perennial Ryegrass (Poaceae) Population
Cited by: 20
Author(s): Daniel Thorogood, Steven Yates, Chloé Manzanares, Leif Skøt, Matthew J. Hegarty, Tina Blackmore, Susanne Barth, Bruno Studer
Software Mentions: 3
Published: about 9 years ago

10.3389/fpls.2020.561413

Chilling and Forcing From Cut Twigs—How to Simplify Phenological Experiments for Citizen Science
Cited by: 11
Author(s): Annette Menzel, Ye Yuan, Andreas Hamann, Ulrike Ohl, Michael Matiu
Software Mentions: 3
Published: almost 6 years ago

10.3389/fpls.2020.01178

It Is Hot in the Sun: Antarctic Mosses Have High Temperature Optima for Photosynthesis Despite Cold Climate
Cited by: 37
Author(s): Alicia Perera-Castro, Melinda J. Waterman, Johanna D. Turnbull, Michael B. Ashcroft, Ella McKinley, Jennifer R. Watling, Jessica Bramley-Alves, Angélica Casanova-Katny, Gustavo E. Zúñiga, Jaume Flexas, Sharon A. Robinson
Software Mentions: 3
Published: about 6 years ago

10.3389/fpls.2021.668623

The Wild Sugarcane and Sorghum Kinomes: Insights Into Expansion, Diversification, and Expression Patterns
Cited by: 16
Author(s): Alexandre Hild Aono, Ricardo José Gonzaga Pimenta, Ana Letycia Basso Garcia, Fernando Henrique Correr, Guilherme Kenichi Hosaka, Marishani Marin Carrasco, Cláudio Benício Cardoso-Silva, Melina Cristina Mancini, Danilo Augusto Sforça, Lucas Borges dos Santos, James Shiniti Nagai, Luciana Rossini Pinto, Marcos Guimarães de Andrade Landell, Monalisa Sampaio Carneiro, Thiago Willian Almeida Balsalobre, Marcos G. Quiles, Welison Andrade Pereira, Gabriel Rodrigues Alves Margarido, Anete Pereira de Souza
Software Mentions: 3
Published: about 5 years ago

10.3389/fpls.2017.02039

Arbuscular Mycorrhizal Fungus Enhances Lateral Root Formation in Poncirus trifoliata (L.) as Revealed by RNA-Seq Analysis
Cited by: 31
Author(s): Weili Chen, Juan Li, Honghui Zhu, Pengyang Xu, Jiezhong Chen, Qing Yao
Software Mentions: 3
Published: over 8 years ago

10.3389/fpls.2021.712167

Genetic Dissection of Grain Yield Component Traits Under High Nighttime Temperature Stress in a Rice Diversity Panel
Cited by: 3
Author(s): Anuj Kumar, Chirag Gupta, Julie Thomas, Andy Pereira
Software Mentions: 3
Published: almost 5 years ago

10.3389/fpls.2021.715377

Homo- and Dikaryons of the Arbuscular Mycorrhizal Fungus Rhizophagus irregularis Differ in Life History Strategy
Cited by: 14
Author(s): Edward Umberto Serghi, Vasilis Kokkoris, Calvin Cornell, Jeremy R. Dettman, Franck Stefani, Nicolas Corradi
Software Mentions: 3
Published: about 5 years ago

10.3389/fpls.2019.01263

Identification and Validation of Candidate Genes Involved in Fatty Acid Content in Oil Palm by Genome-Wide Association Analysis
Cited by: 20
Author(s): Wei Xia, Tingting Luo, Yajing Dou, Wei Zhang, Annaliese S. Mason, Dong Huang, Xiaolong Huang, Wenqi Tang, Jihua Wang, Chunyu Zhang, Yong Xiao
Software Mentions: 3
Published: almost 7 years ago

10.3389/fpls.2021.587640

Fine Mapping of Leaf Trichome Density Revealed a 747-kb Region on Chromosome 1 in Cold-Hardy Hybrid Wine Grape Populations
Cited by: 10
Author(s): Yin Lu, Avinash Karn, Lance Cadle‐Davidson, Cheng Zou, Anna Underhill, Paul Atkins, Erin L. Treiber, Daniel F. Voytas, Matthew D. Clark
Software Mentions: 3
Published: over 5 years ago

10.3390/genes12091374

Identification of Long Non-Coding RNAs Involved in Porcine Fat Deposition Using Two High-Throughput Sequencing Methods
Cited by: 5
Author(s): Yibing Liu, Ying Yu, Ai Hong, Fengxia Zhang, Xitong Zhao, Huatao Liu, Yong Shi, Kai Xing, Chuduan Wang
Software Mentions: 3
Published: almost 5 years ago

10.1590/1678-4685-GMB-2018-0351

A comparison between SOLiD 5500XLand Ion Torrent PGM-derived miRNA expression profiles in two breast cell lines
Cited by: 1
Author(s): Gabriela P. Branco, Renan Valieris, Lucas Venezian Povoa, Luíza Ferreira de Araújo, Gustavo Ribeiro Fernandes, Jorge Estefano Santana de Souza, María Galli de Amorim, Elisa Napolitano Ferreira, Israel Tojal da Silva, Diana Noronha Nunes, Emmanuel Dias-Neto
Software Mentions: 3
Published: over 6 years ago

10.1186/s12711-019-0456-8

Removal of alleles by genome editing (RAGE) against deleterious load
Cited by: 45
Author(s): Martin Johnsson, R. Chris Gaynor, Janez Jenko, Gregor Gorjanc, Dirk-Jan de Koning, John M. Hickey
Software Mentions: 3
Published: over 7 years ago

10.1186/s12711-021-00608-3

Identification of QTL regions and candidate genes for growth and feed efficiency in broilers
Cited by: 14
Author(s): Wei Li, Maiqing Zheng, Guiping Zhao, Jie Wang, Jie Liu, Shunli Wang, Furong Feng, Dawei Liu, Dan Zhu, Qinghe Li, Liping Guo, Yuming Guo, Ranran Liu, Jie Wen
Software Mentions: 3
Published: over 5 years ago

10.1186/gb-2012-13-12-r113

Assessing telomeric DNA content in pediatric cancers using whole-genome sequencing data
Cited by: 29
Author(s): Matthew Parker, Xiang Chen, Armita Bahrami, James Dalton, Michael Rusch, Gang Wu, John Easton, Nai Kong V. Cheung, Michael A. Dyer, Elaine R. Mardis, Richard K. Wilson, Charles G. Mullighan, Richard J. Gilbertson, Suzanne J. Baker, Gerard P. Zambetti, David W. Ellison, James R. Downing, Jinghui Zhang
Software Mentions: 3
Published: over 14 years ago

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