Projects: cran: ggplot2
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: almost 3 years ago
4,921 dependent packages
2,865,232 downloads last month
Enhanced Analysis
Educational Contributors:
wilke@austin.utexas.edu
diggsb@ohsu.edu
ruderman@usc.edu
joran.elias@umontana.edu
rjc2003@qatar-med.cornell.edu
skopf@caltech.edu
m.colombo@ed.ac.uk
i.kosmidis@ucl.ac.uk
melimore86@ufl.edu
amurray@vt.edu
nick.kennedy@ed.ac.uk
dongzhuoer@mail.nankai.edu.cn
benjamin.reisman@vanderbilt.edu
briandk@umd.edu
hye@ucsd.edu
thiyanga.talagala@monash.edu
brenstsr@miamioh.edu
saladi@caltech.edu
buyske@stat.rutgers.edu
rjake@sas.upenn.edu
mcmurdie@stanford.edu
paul@stat.auckland.ac.nz
claire.mcwhite@utexas.edu
luke.mcguinness@bristol.ac.uk
mdlama@wm.edu
hjeppson@iastate.edu
Repository Activity:
Repository Owner:
tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
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+8
Academic maintainer emails
1 maintainers with academic email addresses -
+520
Educational commit emails
26 contributors with educational email addresses -
+18
Science terms in README
9 scientific terms found in README
Very Likely Science (100)
Papers Mentioning ggplot2 11,441
10.3389/fphys.2021.612494
Prediction of Mortality in Hemodialysis Patients Using Moving Multivariate DistanceCited by: 5
Author(s): Mingxin Liu, Véronique Legault, Tamàs Fülöp, Anne‐Marie Côté, Dominique Gravel, F. Guillaume Blanchet, Diana Leung, Sylvia Juhong Lee, Yuichi Nakazato, Alan A. Cohen
Software Mentions: 3
Published: over 5 years ago
10.3389/fgene.2020.589076
Identification of mRNAs and lncRNAs Involved in the Regulation of Follicle Development in GoatCited by: 7
Author(s): Zhifeng Zhao, Xian Zou, Tingting Lu, Ming Deng, Yaokun Li, Yongqing Guo, Baoli Sun, Guangbin Liu, Dewu Liu
Software Mentions: 3
Published: over 5 years ago
10.1186/s12917-018-1762-z
Assessing the performance of a Fasciola gigantica serum antibody ELISA to estimate prevalence in cattle in CameroonCited by: 9
Author(s): Robert F. Kelly, Stella Mazeri, Carol A. Hartley, Saidou M. Hamman, Victor Ngu Ngwa, Egbe Franklyn Nkongho, Vincent N. Tanya, Melissa Sander, Lucy Ndip, K. L. Morgan, Adrian Muwonge, Ian Handel, B. M. C. de Bronsvoort, Diana Williams
Software Mentions: 3
Published: over 7 years ago
10.3389/fphys.2021.688946
The Role of Innate Immunity and Bioactive Lipid Mediators in COVID-19 and InfluenzaCited by: 15
Author(s): Sabina Sahanic, Judith Löffler‐Ragg, Piotr Tymoszuk, Richard Hilbe, Egon Demetz, Rebecca Katharina Masanetz, Markus Theurl, Johannes Holfeld, Can Gollmann‐Tepeköylü, Alexandar Tzankov, Guenter Weiss, Martin Giera, Ivan Tancevski
Software Mentions: 3
Published: about 5 years ago
10.1186/s42523-021-00106-3
Interrogating the bovine reproductive tract metagenomes using culture-independent approaches: a systematic reviewCited by: 17
Author(s): Chian Teng Ong, Conny Turni, G. Boe-Hansen, B. J. Hayes, A.E. Lew-Tabor
Software Mentions: 3
Published: about 5 years ago
10.3389/fgene.2019.00660
Patterns of Geographical and Potential Adaptive Divergence in the Genome of the Common Carp (Cyprinus carpio)Cited by: 12
Author(s): Jian Xu, Yanliang Jiang, Zixia Zhao, Hanyuan Zhang, Wenzhu Peng, Jianxin Feng, Chuanju Dong, Baohua Chen, Ruyu Tai, Peng Xu
Software Mentions: 3
Published: about 7 years ago
10.3389/fphys.2020.00860
Residential Altitude Associates With Endurance but Not Muscle Power in Young Swiss MenCited by: 6
Author(s): N Gassmann, Katarina L. Matthes, Patrick Eppenberger, Marek Brabec, Radoslaw Panczak, Marcel Zwahlen, Nicole Bender, Thomas Wyss, Frank J Rühli, Kaspar Staub
Software Mentions: 3
Published: about 6 years ago
10.3389/fgene.2020.566928
A Five-Gene-Pair-Based Prognostic Signature for Predicting the Relapse Risk of Early Stage ER+ Breast CancerCited by: 2
Author(s): Na Li, Hao Cai, Kai Song, You Guo, Qirui Liang, Jiahui Zhang, Rou Chen, Jing Li, Xianlong Wang, Zheng Guo
Software Mentions: 3
Published: almost 6 years ago
10.7554/eLife.67460
Combination of inflammatory and vascular markers in the febrile phase of dengue is associated with more severe outcomesCited by: 7
Author(s): Nguyen Lam Vuong, Phung Khanh Lam, Damien Ming, Huynh Thi Le Duyen, Nguyet Minh Nguyen, Dong Thi Hoai Tam, Kien Duong Thi Hue, Nguyen Vinh Chau, Ngoun Chanpheaktra, Lucy Chai See Lum, Ernesto Pleités, Cameron P. Simmons, Kerstin Rosenberger, Thomas Jaenisch, David A. Bell, Nathalie Acestor, Christine Halleux, Piero Olliaro, Bridget Wills, Ronald B. Geskus, Sophie Yacoub
Software Mentions: 3
Published: about 5 years ago
10.1186/s12894-021-00843-2
EPDR1 is related to stages and metastasize in bladder cancer and can be used as a prognostic biomarkerCited by: 8
Author(s): Yue Yang, Hanchao Zhang, Zhengdao Liu, Faliang Zhao, Guobiao Liang
Software Mentions: 3
Published: over 5 years ago
10.3389/fgene.2021.671585
Upregulation of LIMK1 Is Correlated With Poor Prognosis and Immune Infiltrates in Lung AdenocarcinomaCited by: 12
Author(s): Gui-Fu Lu, Ying Zhou, Chenxi Zhang, Yu Zhang
Software Mentions: 3
Published: about 5 years ago
10.1590/1413-785220162404158362
UNCEMENTED ARTHROPLASTY AFTER HIP METASTATIC DISEASE AND MULTIPLE MYELOMACited by: 2
Author(s): André Mathias Baptista, Sergio Pinheiro de Souza Meirelles, Daniel César Seguel Rebolledo, Luiz Filipe Marques Correia, Olavo Pires de Camargo
Software Mentions: 3
Published: about 10 years ago
10.1186/s12893-021-01298-w
Identification of potential hub genes associated with skin wound healing based on time course bioinformatic analysesCited by: 2
Author(s): Hongtu Zhu, Meng Fan, Gao Wei
Software Mentions: 3
Published: about 5 years ago
10.3389/fphys.2020.608279
Protecting Intestinal Microenvironment Alleviates Acute Graft-Versus-Host DiseaseCited by: 5
Author(s): Zhengcan Zhou, Tao Shang, Xiurong Li, Hongyan Zhu, Yubo Qi, Xin Zhao, Xi Chen, Shi Z, Guixiang Pan, Yuefei Wang, Guanwei Fan, Xiumei Gao, Yan Zhu, Yi Feng
Software Mentions: 3
Published: over 5 years ago
10.3389/fphys.2019.01635
Fermented Animal Source Protein as Substitution of Fishmeal on Intestinal Microbiota, Immune-Related Cytokines and Resistance to Vibrio mimicus in Freshwater Crayfish (Cherax cainii)Cited by: 20
Author(s): Muhammad A.B. Siddik, Ravi Fotedar, Reaz Chaklader, Javed Foysal, Ashfaqun Nahar, Janet Howieson
Software Mentions: 3
Published: over 6 years ago
10.1186/s13104-018-3864-x
Transcriptomic evidence for distinct mechanisms underlying abscission deficiency in the Arabidopsis mutants haesa/haesa-like 2 and nevershedCited by: 6
Author(s): Isaiah Taylor, John C. Walker
Software Mentions: 3
Published: almost 8 years ago
10.1186/s42523-020-00068-y
Signatures of landscape and captivity in the gut microbiota of Southern Hairy-nosed Wombats (Lasiorhinus latifrons)Cited by: 7
Author(s): Raphael Eisenhofer, Kristofer M. Helgen, David A. Taggart
Software Mentions: 3
Published: over 5 years ago
10.3389/fphys.2021.621830
Identification of the Crucial Gene in Overflow Arteriovenous Fistula by Bioinformatics AnalysisCited by: 3
Author(s): Zhengde Zhao, Qining Fu, Liangzhu Hu, Yangdong Liu
Software Mentions: 3
Published: about 5 years ago
10.1186/s12889-021-11483-4
Patterns of child mortality in rural area of Burkina Faso: evidence from the Nanoro health and demographic surveillance system (HDSS)Cited by: 1
Author(s): Navideh Noori, Karim Derra, Innocent Valéa, Assaf P. Oron, Aminata Welgo, Toussaint Rouamba, Palwendé Romuald Boua, Athanase M. Somé, Eli Rouamba, E. A. Wenger, Hermann Sorgho, Halidou Tinto, André Lin Ouédraogo
Software Mentions: 3
Published: about 5 years ago
10.1186/s12870-020-02511-3
Identification of small RNAs during cold acclimation in Arabidopsis thalianaCited by: 21
Author(s): Bhavika Tiwari, Kristin Habermann, Muhammad Arif, Heinrich Lukas Weil, Antoni García-Molina, Tatjana Kleine, Timo Mühlhaus, Wolfgang Frank
Software Mentions: 3
Published: about 6 years ago
10.1186/s12870-021-03155-7
GWAS provides biological insights into mechanisms of the parasitic plant (Striga) resistance in sorghumCited by: 15
Author(s): Jacinta Kavuluko, Magdaline Kibe, Irine Sugut, Willy Kibet, Joel Masanga, Sylvia Mutinda, Mark Wamalwa, Titus Magomere, Damaris Achieng Odeny, Steven Runo
Software Mentions: 3
Published: about 5 years ago
10.3389/fgene.2020.00922
Sperm DNA Hypomethylation Proximal to Reproduction Pathway Genes in Maturing Elite Norwegian Red BullsCited by: 8
Author(s): Abdolrahman Khezri, Birgitte Narud, Else‐Berit Stenseth, Teklu Tewoldebrhan Zeremichael, Frøydis Deinboll Myromslien, Robert Wilson, Rafi Ahmad, Elisabeth Kommisrud
Software Mentions: 3
Published: about 6 years ago
10.1007/s10071-018-1220-0
Sight or smell: which senses do scavenging raptors use to find food?Cited by: 16
Author(s): Simon Potier, Olivier Duriez, Aurélie Célérier, Jean Louis Liegeois, Francesco Bonadonna
Software Mentions: 3
Published: almost 8 years ago
10.1038/s41598-020-71589-4
Towards personalized induction therapy for esophageal adenocarcinoma: organoids derived from endoscopic biopsy recapitulate the pre-treatment tumorCited by: 27
Author(s): Mathieu Derouet, Jonathan Allen, Gavin Wilson, Christine Ng, Nikolina Radulovich, Sangeetha Kalimuthu, Ming‐Sound Tsao, Gail Darling, Jonathan Yeung
Software Mentions: 3
Published: almost 6 years ago
10.1007/s10071-020-01410-2
Who turns to the human? Companion pigs’ and dogs’ behaviour in the unsolvable task paradigmCited by: 13
Author(s): Paula Pérez Fraga, László Gerencsér, Melinda Lovas, Dóra Újváry, Attila Andics
Software Mentions: 3
Published: about 6 years ago
10.1186/s12870-019-1755-5
Physiological responses of Lepidium meyenii plants to ultraviolet-B radiation challengeCited by: 11
Author(s): Thais Huarancca Reyes, Andrea Scartazza, Antonio Pompeiano, Lorenzo Guglielminetti
Software Mentions: 3
Published: over 7 years ago
10.3390/ijms22168792
Parallel Reporter Assays Identify Altered Regulatory Role of rs684232 in Leading to Prostate Cancer PredispositionCited by: 9
Author(s): Naixia Ren, Qingqing Liu, Lingjie Yan, Qilai Huang
Software Mentions: 3
Published: about 5 years ago
10.3389/fgene.2018.00263
A Multilocus Approach to Understanding Historical and Contemporary Demography of the Keystone Floodplain Species Colossoma macropomum (Teleostei: Characiformes)Cited by: 9
Author(s): Maria da Conceição Freitas Santos, Tomas Hrbek, Izeni Pires Farias
Software Mentions: 3
Published: about 8 years ago
10.1186/s12870-021-03197-x
Geographic distribution of the E1 family of genes and their effects on reproductive timing in soybeanCited by: 5
Author(s): Nicholas Dietz, Rachel Combs-Giroir, Grace Cooper, Minviluz G. Stacey, Carrie Miranda, Kristin Bilyeu
Software Mentions: 3
Published: almost 5 years ago
10.1186/s12870-018-1587-8
Interactive effects of multiple vernalization (Vrn-1)- and photoperiod (Ppd-1)-related genes on the growth habit of bread wheat and their association with heading and flowering timeCited by: 10
Author(s): Shulin Chen, Junsen Wang, Genwang Deng, Long Chen, Xuejiao Cheng, Haixia Xu, Kai Zhan
Software Mentions: 3
Published: over 7 years ago
10.1186/s12870-020-2305-x
Linking crop traits to transcriptome differences in a progeny population of tetraploid potatoCited by: 7
Author(s): Erik Alexandersson, Sandeep Kushwaha, Aastha Subedi, Deborah Weighill, Sharlee Climer, Daniel Jacobson, Erik Andréasson
Software Mentions: 3
Published: over 6 years ago
10.1186/s12870-020-02365-9
High abundance of Ralstonia solanacearum changed tomato rhizosphere microbiome and metabolomeCited by: 33
Author(s): Teng Wen, Mingwen Zhao, Ting Liu, Qiwei Huang, Jun Yuan, Qirong Shen
Software Mentions: 3
Published: over 6 years ago
10.3390/ijms22179349
Loss of Gene Information: Discrepancies between RNA Sequencing, cDNA Microarray, and qRT-PCRCited by: 16
Author(s): Nicole Rachinger, Stefan Fischer, Ines Böhme, Lisa Linck-Paulus, Silke Kuphal, Melanie Kappelmann‐Fenzl, Anja‐Katrin Bosserhoff
Software Mentions: 3
Published: almost 5 years ago
10.1186/s12870-020-02604-z
Identification of quantitative trait nucleotides and candidate genes for soybean seed weight by multiple models of genome-wide association studyCited by: 20
Author(s): Benjamin Karikari, Zili Wang, Yefei Zhou, Wenliang Yan, Jiao Feng, Tuanjie Zhao
Software Mentions: 3
Published: almost 6 years ago
10.1155/2020/6827057
Development of a Ten-lncRNA Signature Prognostic Model for Breast Cancer Survival: A Study with the TCGA DatabaseCited by: 11
Author(s): Wenqing Zhou, Yongkui Pang, Yunmin Yao, Huiying Qiao
Software Mentions: 3
Published: about 6 years ago
10.1186/s12864-017-3719-1
Transcriptome-wide N 6 -methyladenosine methylome profiling of porcine muscle and adipose tissues reveals a potential mechanism for transcriptional regulation and differential methylation patternCited by: 42
Author(s): Xiaochun Tao, Jianning Chen, Yanzhi Jiang, Yingying Wei, Chen Yan, Huaming Xu, Li Zhu, Guoqing Tang, Mingzhou Li, Anan Jiang, Surong Shuai, Lin Bai, Haifeng Liu, Jideng Ma, Long Jin, Anxiang Wen, Qin Wang, Guangxiang Zhu, Meng Xie, Jiayun Wu, Tao He, Chunyu Huang, Xiang Gao, Xuewei Li
Software Mentions: 3
Published: over 9 years ago
10.1186/s12864-021-07900-y
LncGSEA: a versatile tool to infer lncRNA associated pathways from large-scale cancer transcriptome sequencing dataCited by: 2
Author(s): Yanan Ren, Ting You Wang, Leah C. Anderton, Qi Cao, Rendong Yang
Software Mentions: 3
Published: about 5 years ago
10.1186/s12864-019-5816-9
The effect of Wolbachia on gene expression in Drosophila paulistorum and its implications for symbiont-induced host speciationCited by: 19
Author(s): Guilherme Costa Baião, Daniela Schneider, Wolfgang J. Miller, Lisa Klasson
Software Mentions: 3
Published: about 7 years ago
10.1186/s12870-021-02893-y
Composition and diversity of bacterial communities in the rhizosphere of the Chinese medicinal herb DendrobiumCited by: 32
Author(s): Jiajia Zuo, Mengting Zu, Lei Liu, Xiaomei Song, Yingdan Yuan
Software Mentions: 3
Published: over 5 years ago
10.3390/ijms22189799
Identification of miR-199a-5p, miR-214-3p and miR-99b-5p as Fibrosis-Specific Extracellular Biomarkers and Promoters of HSC ActivationCited by: 7
Author(s): Catherine Jane Messner, Saskia Schmidt, Dilek Özkul, Carine Gaiser, Luigi Terracciano, Stephan Krähenbühl, Laura Suter‐Dick
Software Mentions: 3
Published: almost 5 years ago
10.1186/s12887-020-02344-x
Impact of congenital heart disease on outcomes among pediatric patients hospitalized for influenza infectionCited by: 13
Author(s): Laxmi V. Ghimire, Fu‐Sheng Chou, Anita J. Moon-Grady
Software Mentions: 3
Published: almost 6 years ago
10.3390/ijms221810073
Systemic Expression of Genes Involved in the Plant Defense Response Induced by Wounding in Senna toraCited by: 11
Author(s): Ji-Nam Kang, Woo-Haeng Lee, So Youn Won, Saemin Chang, Jaemin Hong, Tae‐Jin Oh, Si Myung Lee, Sang-Ho Kang
Software Mentions: 3
Published: almost 5 years ago
10.1186/s12903-020-01156-w
Association between periodontitis and all-cause and cancer mortality: retrospective elderly community cohort studyCited by: 14
Author(s): Ping-Chen Chung, Ta‐Chien Chan
Software Mentions: 3
Published: about 6 years ago
10.3389/fmicb.2020.619968
Evidence for Proline Utilization by Oral Bacterial Biofilms Grown in SalivaCited by: 7
Author(s): Leanne Cleaver, Rebecca Moazzez, Guy Carpenter
Software Mentions: 3
Published: over 5 years ago
10.3389/fgene.2020.00778
Identification of Potential Biomarkers for CAD Using Integrated Expression and Methylation DataCited by: 5
Author(s): Xiaokang Zhang, Yu‐Tao Xiang, Dingdong He, Bin Liang, Chen Wang, Jing Luo, Fang Zheng
Software Mentions: 3
Published: almost 6 years ago
10.1186/s12903-021-01719-5
Core of the saliva microbiome: an analysis of the MG-RAST dataCited by: 8
Author(s): Simone Santos Oliveira, Rafaela Rie Nishiyama, Claudio A C Trigo, Ana Luíza Mattos‐Guaraldi, Alberto M. R. Dávila, Rodrigo Desessards Jardim, Flávio Henrique Baggio Aguiar
Software Mentions: 3
Published: about 5 years ago
10.1186/1471-2415-13-40
Tear fluid proteomics multimarkers for diabetic retinopathy screeningCited by: 46
Author(s): Zsuzsa Török, Tünde Pető, Éva Csősz, Edit Tukacs, Ágnes Molnár, Zsuzsanna Maros-Szabó, András Berta, József Tőzsér, András Hajdú, Valéria Nagy, Bálint Domokos, Adrienne Csutak
Software Mentions: 3
Published: about 13 years ago
10.1098/rspb.2021.0121
Dietary plasticity of North American herbivores: a synthesis of stable isotope data over the past 7 million yearsCited by: 5
Author(s): Melissa I. Pardi, Larisa R.G. DeSantis
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2021.631250
Adaptive Gene Content and Allele Distribution Variations in the Wild and Domesticated Populations of Saccharomyces cerevisiaeCited by: 12
Author(s): Dayong Han, Pei‐Jie Han, Karl Rumbold, Anbessa Dabassa Koricha, Shoufu Duan, Liang Song, Junyan Shi, Kuan Li, Qiming Wang, Feng‐Yan Bai
Software Mentions: 3
Published: over 5 years ago
10.3390/ijms221910574
miR-29a-3p/THBS2 Axis Regulates PAH-Induced Cardiac FibrosisCited by: 10
Author(s): Chao Kai Hsu, I-Fan Liu, Hsuan-Fu Kuo, Chia-Yang Li, Wei Lian, Chia Yuan Chang, Yung‐Hsiang Chen, Wei-Lun Liu, Chi‐Yu Lu, Yuru Liu, Tzu-Chieh Lin, Tsung-Ying Lee, Chi-Yuan Huang, Chong‐Chao Hsieh, Po-Len Liu
Software Mentions: 3
Published: almost 5 years ago
10.1098/rspb.2019.1487
Optimizing future biodiversity sampling by citizen scientistsCited by: 41
Author(s): Corey T. Callaghan, Alistair G. B. Poore, Richard E. Major, Jodi J. L. Rowley, William K. Cornwell
Software Mentions: 3
Published: almost 7 years ago
10.1186/s12883-018-1149-6
Comorbidity of migraine with ADHD in adultsCited by: 24
Author(s): Thomas Folkmann Hansen, Louise K. Hoeffding, Lisette J. A. Kogelman, Thilde Marie Haspang, Henrik Ullum, Erik Sørensen, Christian Erikstrup, Ole Birger Pedersen, Kaspar René Nielsen, Henrik Hjalgrim, Helene M. Paarup, Thomas Werge, Kristoffer Sølvsten Burgdorf
Software Mentions: 3
Published: almost 8 years ago
10.1098/rspb.2017.2116
Deep pelagic food web structure as revealed by <i>in situ</i> feeding observationsCited by: 74
Author(s): C. Anela Choy, Steven H. D. Haddock, Bruce H. Robison
Software Mentions: 3
Published: over 8 years ago
10.5194/pb-7-41-2020
Testing lipid markers as predictors of all-cause morbidity, cardiac disease, and mortality risk in captive western lowland gorillas (&lt;i&gt;Gorilla gorilla gorilla&lt;/i&gt;)Cited by: 3
Author(s): Ashley N. Edes, Janine L. Brown, Katie L. Edwards
Software Mentions: 3
Published: over 5 years ago
10.1186/s12879-020-05091-7
Live poultry market closure and avian influenza A (H7N9) infection in cities of China, 2013–2017: an ecological studyCited by: 6
Author(s): Ying Chen, Jian Cheng, Zhiwei Xu, Wenbiao Hu, Jiahai Lu
Software Mentions: 3
Published: about 6 years ago
10.1007/s00216-019-01976-y
Quantification of nitroaromatic explosives in contaminated soil using MALDI-TOF mass spectrometryCited by: 11
Author(s): Susan Kober, Henner Hollert, Marcus Frohme
Software Mentions: 3
Published: about 7 years ago
10.1371/journal.ppat.1009859
Metabolomics provide new insights into mechanisms of Wolbachia-induced paternal defects in Drosophila melanogasterCited by: 7
Author(s): Hua‐Bao Zhang, Zheng Cao, Jun-Xue Qiao, Zi-Qian Zhong, Chenchen Pan, Chen Liu, Limin Zhang, Yufeng Wang
Software Mentions: 3
Published: about 5 years ago
10.1186/s13568-017-0444-8
The role of inorganic nitrogen in successful formation of granular biofilms for wastewater treatment that support cyanobacteria and bacteriaCited by: 45
Author(s): Kristie Stauch-White, V. Srinivasan, Wenye Camilla Kuo-Dahab, Chul Park, Caitlyn S. Butler
Software Mentions: 3
Published: about 9 years ago
10.1371/journal.ppat.1009838
Probing the spatiotemporal patterns of HBV multiplication reveals novel features of its subcellular processesCited by: 10
Author(s): Lei Yue, Chang Li, Mingzhu Xu, Min Wu, Jiahui Ding, Jiangxia Liu, Xiaonan Zhang, Zhenghong Yuan
Software Mentions: 3
Published: about 5 years ago
10.1186/s12882-020-01828-3
The association between serum chloride levels and chronic kidney disease progression: a cohort studyCited by: 13
Author(s): Minesh Khatri, Joshua P. Zitovsky, Dale Lee, Kamal Nayyar, Melissa Fazzari, Candace D. Grant
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.ppat.1009138
Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samplesCited by: 28
Author(s): Caoimhe E. O’Brien, João Oliveira-Pacheco, Eoin Ó Cinnéide, Max A. B. Haase, Chris Todd Hittinger, Thomas R. Rogers, Óscar Zaragoza, Ursula Bond, Geraldine Butler
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2017.01008
Cesarean or Vaginal Birth Does Not Impact the Longitudinal Development of the Gut Microbiome in a Cohort of Exclusively Preterm InfantsCited by: 44
Author(s): Christopher J. Stewart, Nicholas D. Embleton, Elizabeth Clements, Pamela N. Luna, Daniel P. Smith, Tatiana Fofanova, Andrew Nelson, Gillian Taylor, Caroline Orr, Joseph F. Petrosino, Janet Berrington, Stephen Cummings
Software Mentions: 3
Published: about 9 years ago
10.1128/JVI.01787-20
Vaccines That Reduce Viral Shedding Do Not Prevent Transmission of H1N1 Pandemic 2009 Swine Influenza A Virus Infection to Unvaccinated PigsCited by: 7
Author(s): Helen Everett, Pauline M. van Diemen, Mario Aramouni, Andrew Ramsay, Vivien Coward, Vincent Pavot, Laetitia Canini, Barbara Holzer, Sophie Morgan, Mark Woolhouse, Elma Tchilian, Sharon M Brookes, Ian H. Brown, Bryan Charleston, Sarah C. Gilbert
Software Mentions: 3
Published: over 5 years ago
10.3389/fphys.2020.567312
Altered Cardiac Autonomic Regulation in Overweight and Obese Subjects: The Role of Age-and-Gender-Adjusted Statistical Indicators of Heart Rate Variability and Cardiac BaroreflexCited by: 6
Author(s): Nadia Solaro, Massimo Pagani, Daniela Lucini
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.ppat.1009175
Escalation in the host-pathogen arms race: A host resistance response corresponds to a heightened bacterial virulence responseCited by: 5
Author(s): Qi Wang, Nadia Shakoor, Adam Boyher, Kira M. Veley, Jeffrey C. Berry, Todd C. Mockler, Rebecca Bart
Software Mentions: 3
Published: over 5 years ago
10.1186/s12891-017-1791-y
Co-expression of 1α-hydroxylase and vitamin D receptor in human articular chondrocytesCited by: 10
Author(s): Ann Kristin Hansen, Yngve Figenschau, Inigo Zubiaurre-Martinez
Software Mentions: 3
Published: almost 9 years ago
10.3389/fgene.2019.00752
Integration of Cross Species RNA-seq Meta-Analysis and Machine-Learning Models Identifies the Most Important Salt Stress–Responsive Pathways in Microalga DunaliellaCited by: 39
Author(s): Bahman Panahi, Mohammad Frahadian, Jacob T. Dums, Mohammad Amin Hejazi
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.ppat.1008216
Novel RNA viruses associated with Plasmodium vivax in human malaria and Leucocytozoon parasites in avian diseaseCited by: 52
Author(s): Justine Charon, Matthew J. Grigg, John Sebastian Eden, Kim A. Piera, Hafsa Rana, Timothy William, Karrie Rose, Miles P. Davenport, Nicholas M. Anstey, Edward C. Holmes
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.ppat.1007626
A core set of venom proteins is released by entomopathogenic nematodes in the genus SteinernemaCited by: 52
Author(s): Dennis Chang, Lorrayne Serra, Dihong Lu, A Mortazavi, Adler R. Dillman
Software Mentions: 3
Published: over 7 years ago
10.3389/fgene.2021.619056
Dynamic Transcriptome Sequencing of Bovine Alphaherpesvirus Type 1 and Host Cells Carried Out by a Multi-Technique ApproachCited by: 5
Author(s): Dóra Tombácz, Norbert Moldován, Gábor Torma, Tibor Nagy, Ákos Hornyák, Zsolt Csabai, Gábor Gulyás, Miklós Boldogkői, Victoria A Jefferson, Zoltán Zádori, Florencia Meyer, Zsolt Boldogköi
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2020.618144
Organic Acids as Alternatives for Antibiotic Growth Promoters Alter the Intestinal Structure and Microbiota and Improve the Growth Performance in BroilersCited by: 37
Author(s): Dong Dai, Kai Qiu, Haijun Zhang, Shu‐geng Wu, Yanming Han, Yuanyuan Wu, Guang‐hai Qi, Jing Wang
Software Mentions: 3
Published: over 5 years ago
10.3389/fonc.2021.630417
Prognostic and Immunological Role of mRNA ac4C Regulator NAT10 in Pan-Cancer: New Territory for Cancer Research?Cited by: 19
Author(s): Chuanxi Yang, Tingting Wu, Jing Zhang, Jinhui Liu, Kun Zhao, Wei Sun, Xin Zhou, Xiangqing Kong, Jing Shi
Software Mentions: 3
Published: over 5 years ago
10.2196/27132
Proof-of-Concept Support for the Development and Implementation of a Digital Assessment for Perinatal Mental Health: Mixed Methods StudyCited by: 10
Author(s): Nayra A Martin-Key, Benedetta Spadaro, Thea Schei, Sabine Bahn
Software Mentions: 3
Published: about 5 years ago
10.1073/pnas.1903485116
Heterogeneity of Myc expression in breast cancer exposes pharmacological vulnerabilities revealed through executable mechanistic modelingCited by: 13
Author(s): Peter Kreuzaler, Malcolm Clarke, Elizabeth J. Brown, Catherine H. Wilson, Roderik M. Kortlever, Nir Piterman, Trevor D. Littlewood, Gérard I. Evan, Jasmin Fisher
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.ppat.1005576
Transformed Recombinant Enrichment Profiling Rapidly Identifies HMW1 as an Intracellular Invasion Locus in Haemophilus influenzaeCited by: 15
Author(s): Joshua Chang Mell, Cristina Viadas, Javier Moleres, Sunita Sinha, Ariadna Fernández-Calvet, Eric A. Porsch, Joseph W. St. Geme, Corey Nislow, Rosemary J. Redfield, Junkal Garmendia
Software Mentions: 3
Published: over 10 years ago
10.1073/pnas.2013554117
HLA tapasin independence: broader peptide repertoire and HIV controlCited by: 46
Author(s): Arman Bashirova, Mathias Viard, Vivek Naranbhai, Alba Grifoni, Wilfredo F. García-Beltrán, Marjan Akdag, Yuko Yuki, Xiaojiang Gao, Colm Ó'hUigín, Malini Raghavan, Steven M. Wolinsky, Jay H. Bream, Priya Duggal, Jeremy Martinson, Nelson L. Michael, Gregory D. Kirk, Susan Buchbinder, David W. Haas, James J. Goedert, Steven G. Deeks, Jacques Fellay, Bruce D. Walker, Philip Goulder, Peter Cresswell, Tim Elliott, Alessandro Sette, Jonathan M. Carlson, Mary Carrington
Software Mentions: 3
Published: almost 6 years ago
10.1371/journal.ppat.1005273
Plasmodium P-Type Cyclin CYC3 Modulates Endomitotic Growth during Oocyst Development in MosquitoesCited by: 60
Author(s): Magali Roques, Richard J. Wall, Alexander P. Douglass, Abhinay Ramaprasad, David Ferguson, Mbinda L. Kaindama, Lorenzo Brusini, Joshi Nimitray, Zineb Rchiad, Declan Brady, David S. Guttery, Sally P. Wheatley, Hiroyuki Yamano, Anthony A. Holder, Arnab Pain, Bill Wickstead, Rita Tewari
Software Mentions: 3
Published: almost 11 years ago
10.1186/s12866-019-1548-x
Comparative diversity of microbiomes and Resistomes in beef feedlots, downstream environments and urban sewage influentCited by: 24
Author(s): Rahat Zaheer, Steven M. Lakin, Rodrigo Ortega Polo, Shaun R. Cook, Francis J. Larney, Paul S. Morley, Calvin W. Booker, Sherry J. Hannon, Gary Van Domselaar, Ron Read, Tim A. McAllister
Software Mentions: 3
Published: almost 7 years ago
10.1186/s12864-017-4316-z
Global gene expression reveals stress-responsive genes in Aspergillus fumigatus myceliaCited by: 25
Author(s): Hiroki Takahashi, Yoko Kusuya, Daisuke Hagiwara, Azusa Takahashi‐Nakaguchi, Kanae Sakai, Tohru Gonoi
Software Mentions: 3
Published: over 8 years ago
10.1371/journal.ppat.1004809
Transgenic Expression of the Dicotyledonous Pattern Recognition Receptor EFR in Rice Leads to Ligand-Dependent Activation of Defense ResponsesCited by: 94
Author(s): Benjamin Schwessinger, Ofir Bahar, Nicholas Thomas, Nicholas Holton, Vladimir Nekrasov, Deling Ruan, Patrick E. Canlas, Arsalan Daudi, Young-Mo Kim, Vasanth Singan, Rita C. Kuo, Mansi Chovatia, Christopher Daum, Joshua L. Heazlewood, Cyril Zipfel, Pamela C. Ronald
Software Mentions: 3
Published: over 11 years ago
10.3389/fonc.2020.606765
KIF21B Expression in Osteosarcoma and Its Regulatory Effect on Osteosarcoma Cell Proliferation and Apoptosis Through the PI3K/AKT PathwayCited by: 7
Author(s): Songjia Ni, Jianjun Li, Sujun Qiu, Yingming Xie, Kaiqin Gong, Yang Duan
Software Mentions: 3
Published: over 5 years ago
10.1073/pnas.2022702118
Photosynthesis-independent production of reactive oxygen species in the rice bundle sheath during high light is mediated by NADPH oxidaseCited by: 24
Author(s): Haiyan Xiong, Lei Hua, Ivan Reyna-Llorens, Yi Shi, Kun-Ming Chen, Nicholas Smirnoff, Johannes Kromdijk, Julian M. Hibberd
Software Mentions: 3
Published: about 5 years ago
10.3389/fonc.2020.01775
Cultivation of Clear Cell Renal Cell Carcinoma Patient-Derived Organoids in an Air-Liquid Interface System as a Tool for Studying Individualized TherapyCited by: 23
Author(s): Laura Kristin Esser, Vittorio Branchi, Sonia Leonardelli, Natalie Pelusi, Adolfo Simón, Niklas Klümper, Jörg Ellinger, Stefan Hauser, Maria A. Gonzalez‐Carmona, Manuel Ritter, Glen Kristiansen, Hubert Schorle, Michael Hölzel, Marieta Toma
Software Mentions: 3
Published: almost 6 years ago
10.1073/pnas.2026289118
Dopaminergic brainstem disconnection is common to pharmacological and pathological consciousness perturbationCited by: 33
Author(s): Lennart R. B. Spindler, Andrea I. Luppi, R. Adapa, Michael Craig, Peter Coppola, Alexander R.D. Peattie, Anne Manktelow, Paola Finoia, Barbara J. Sahakian, Guy B. Williams, Judith Allanson, John D. Pickard, David Menon, Emmanuel A. Stamatakis
Software Mentions: 3
Published: about 5 years ago
10.3389/fonc.2020.605737
A Novel Four-Gene Signature Associated With Immune Checkpoint for Predicting Prognosis in Lower-Grade GliomaCited by: 12
Author(s): Youchao Xiao, Gang Cui, Xingguang Ren, Jiaqi Hao, Yu Zhang, Xin Yang, Zhuangzhuang Wang, Xiaolin Zhu, Huan Wang, Chunyan Hao, Hubin Duan
Software Mentions: 3
Published: almost 6 years ago
10.3389/fonc.2020.553628
Up-regulation of L Antigen Family Member 3 Associates With Aggressive Progression of Breast CancerCited by: 3
Author(s): Xubin Dong, Shihui Lv, Di Gu, Xiaohua Zhang, Zhiqiang Ye
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2018.00128
Interspecific Plant Interactions Reflected in Soil Bacterial Community Structure and Nitrogen Cycling in Primary SuccessionCited by: 53
Author(s): Joseph E. Knelman, Emily B. Graham, Janet S. Prevéy, Michael S. Robeson, Patrick H. Kelly, Eran Hood, Steven K. Schmidt
Software Mentions: 3
Published: over 8 years ago
10.1093/jxb/eraa123
Pre-akinete formation in Zygnema sp. from polar habitats is associated with metabolite re-arrangementCited by: 18
Author(s): Erwann Arc, Martina Pichrtová, Ilse Kranner, Andreas Holzinger
Software Mentions: 3
Published: over 6 years ago
10.3390/proteomes5040031
Quantification of Cardiovascular Disease Biomarkers in Human Platelets by Targeted Mass SpectrometryCited by: 12
Author(s): Sebastian Malchow, Christina Looße, Albert Sickmann, Christin Lorenz
Software Mentions: 3
Published: almost 9 years ago
10.3389/fmicb.2019.00531
Bacterial Diversity and Population Dynamics During the Fermentation of Palm Wine From Guerrero MexicoCited by: 25
Author(s): Fernando Astudillo-Melgar, Adrián Ochoa-Leyva, José Utrilla, Gerardo Huerta-Beristain
Software Mentions: 3
Published: over 7 years ago
10.3389/fgene.2021.740167
Ancient Mitochondrial Genomes Reveal Extensive Genetic Influence of the Steppe Pastoralists in Western XinjiangCited by: 6
Author(s): Chao Ning, Hou-Feng Zheng, Fan Zhang, Sihao Wu, Chunxiang Li, Yunlong Zhao, Yang Xu, Dong Wei, Yong Wu, Shizhu Gao, Jin Li, Yinqiu Cui
Software Mentions: 3
Published: almost 5 years ago
10.1093/jxb/erx349
Transfer of a starch phenotype from wild wheat to bread wheat by deletion of a locus controlling B-type starch granule contentCited by: 21
Author(s): Tansy Chia, Nikolai M Adamski, Benedetta Saccomanno, Andrew J. Greenland, Alastair Nash, Cristóbal Uauy, Kay Trafford
Software Mentions: 3
Published: almost 9 years ago
10.1093/jxb/erw003
Leaf Length Tracker: a novel approach to analyse leaf elongation close to the thermal limit of growth in the fieldCited by: 29
Author(s): Sebastian Nagelmüller, Norbert Kirchgeßner, Steven Yates, Maya Hiltpold, Achim Walter
Software Mentions: 3
Published: over 10 years ago
10.3390/proteomes8030024
Profiling of Inflammatory Proteins in Plasma of HIV-1-Infected Children Receiving Antiretroviral TherapyCited by: 9
Author(s): Mahlet Lemma, Stefan Petkov, Yonas Bekele, Beyene Petros, Rawleigh Howe, Francesca Chiodi
Software Mentions: 3
Published: almost 6 years ago
10.1093/jxb/erv074
Evolution of US maize (Zea mays L.) root architectural and anatomical phenes over the past 100 years corresponds to increased tolerance of nitrogen stressCited by: 144
Author(s): Larry M. York, Tania Galindo-Castañeda, Jeffrey R. Schussler, Jonathan P. Lynch
Software Mentions: 3
Published: over 11 years ago
10.1242/jeb.233403
Early developmental stages of native populations of <i>Ciona intestinalis</i> under increased temperature are affected by local habitat historyCited by: 4
Author(s): Elizabeth A. Clutton, Gastón Alurralde, Tiago Repolho
Software Mentions: 3
Published: over 5 years ago
10.3389/fonc.2021.651350
The Landscape of Microbial Composition and Associated Factors in Pancreatic Ductal Adenocarcinoma Using RNA-Seq DataCited by: 3
Author(s): Dong Yu, Tengjiao Wang, Dong Liang, Mei Yue, Wenbin Zou, Shiwei Guo
Software Mentions: 3
Published: about 5 years ago
10.3390/proteomes9020029
Mining Proteome Research Reports: A Bird’s Eye ViewCited by: 1
Author(s): Jagajjit Sahu
Software Mentions: 3
Published: about 5 years ago
10.1093/jee/toz346
Comparing Prophylactic Versus Threshold-Based Insecticide Programs for Striped Cucumber Beetle (Coleoptera: Chrysomelidae) Management in WatermelonCited by: 13
Author(s): John J Ternest, Laura L. Ingwell, R. E. Foster, Ian Kaplan
Software Mentions: 3
Published: over 6 years ago
10.3389/fgene.2019.01215
Expression Quantitative Trait Loci in Equine Skeletal Muscle Reveals Heritable Variation in Metabolism and the Training Responsive TranscriptomeCited by: 8
Author(s): Gabriella Farries, Kenneth Bryan, C. L. McGivney, Paul A. McGettigan, K. F. Gough, John A. Browne, David E. MacHugh, Lisa Katz, Emmeline W. Hill
Software Mentions: 3
Published: over 6 years ago