cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.15252/embr.202050287

Scaf1 promotes respiratory supercomplexes and metabolic efficiency in zebrafish
Cited by: 40
Author(s): Carolina García-Poyatos, Sara Cogliati, Enrique Calvo, Pablo Hernansanz-Agustín, Sandrine Lagarrigue, Ricardo Magni, Marius Botos, Xavier Langa, Francesca Amati, Jesús Vázquez, Nadia Mercader, José Antonio Enríquez
Software Mentions: 3
Published: about 6 years ago

10.3390/jcm9092920

A Pilot Study on MicroRNA Profile in Tear Fluid to Predict Response to Anti-VEGF Treatments for Diabetic Macular Edema
Cited by: 9
Author(s): Hwei Wuen Chan, Binxia Yang, Wai P. Wong, Paul Blakeley, Ivan Seah, Queenie Shu Woon Tan, Haofei Wang, Mayuri Bhargava, Hazel Anne Lin, Charmaine Chai, Erlangga Ariadarma Mangunkusumo, Thet Naing, Yew Sen Yuen, Raman Sethi, Si Wang, Walter Hunziker, Lingam Gopal, Xinyi Su
Software Mentions: 3
Published: almost 6 years ago

10.3390/s17020404

Remote Sensing of Urban Microclimate Change in L’Aquila City (Italy) after Post-Earthquake Depopulation in an Open Source GIS Environment
Cited by: 10
Author(s): Valerio Baiocchi, Fabio Zottele, Donatella Dominici
Software Mentions: 3
Published: over 9 years ago

10.3390/jcm9093000

Complex Immunometabolic Profiling Reveals the Activation of Cellular Immunity and Biliary Lesions in Patients with Severe COVID-19
Cited by: 1
Author(s): Adam Klocperk, Markéta Bloomfield, Zuzana Paračková, Irena Zentsová, Petra Vrabcová, Jan Balko, Grigorij Mesežnikov, Luis Fernando Casas Mendez, Alžběta Grandcourtová, Jan Šípek, Martin Tulach, Josef Zámečnı́k, Tomáš Vymazal, Anna Šedivá
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2021.707281

Comparative Mitogenomic Analysis and the Evolution of Rhizoctonia solani Anastomosis Groups
Cited by: 3
Author(s): Runmao Lin, Y. L. Xia, Yao Liu, Danhua Zhang, Xiang Xiao, Xianyu Niu, Linjia Jiang, Xiaolin Wang, Aiping Zheng
Software Mentions: 3
Published: almost 5 years ago

10.1186/s12917-018-1762-z

Assessing the performance of a Fasciola gigantica serum antibody ELISA to estimate prevalence in cattle in Cameroon
Cited by: 9
Author(s): Robert F. Kelly, Stella Mazeri, Carol A. Hartley, Saidou M. Hamman, Victor Ngu Ngwa, Egbe Franklyn Nkongho, Vincent N. Tanya, Melissa Sander, Lucy Ndip, K. L. Morgan, Adrian Muwonge, Ian Handel, B. M. C. de Bronsvoort, Diana Williams
Software Mentions: 3
Published: over 7 years ago

10.1002/cam4.2410

Incidence and outcome of BCR‐ABL mutated chronic myeloid leukemia patients who failed to tyrosine kinase inhibitors
Cited by: 14
Author(s): Gabriel Étienne, Stéphanie Dulucq, Françoise Huguet, Anna Schmitt, Axelle Lascaux, Sandrine Hayette, Marie‐Pierre Fort, Pierre Sujobert, Fontanet Bijou, Stéphane Morisset, Suzanne Tavitian, Audrey Bidet, Béatrice Turcq, Fanny Robbesyn, Claudine Chollet, Françis Belloc, Françoise Durrieu, François‐Xavier Mahon, Franck E. Nicolini
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0155957

Genetic and Environmental Control of Neurodevelopmental Robustness in Drosophila
Cited by: 17
Author(s): David J. Mellert, W. Ryan Williamson, Troy R. Shirangi, Gwyneth M Card, James W. Truman
Software Mentions: 3
Published: about 10 years ago

10.3390/ijerph18179081

Cognitive Remediation in Virtual Environments for Patients with Schizophrenia and Major Depressive Disorder: A Feasibility Study
Cited by: 1
Author(s): Adéla Plechatá, Lukáš Hejtmánek, Martina Bednářová, Iveta Fajnerová
Software Mentions: 3
Published: almost 5 years ago

10.3389/fonc.2021.672228

Progression-Free Survival, Prognostic Factors, and Surgical Outcome of Spheno-Orbital Meningiomas
Cited by: 10
Author(s): Waseem Masalha, Dieter Henrik Heiland, Christine Steiert, Marie T. Krüger, Daniel Schnell, Christian Scheiwe, Oliver Schnell, A.L. Grosu, Jürgen Beck, Juergen Grauvogel
Software Mentions: 3
Published: about 5 years ago

10.1128/mBio.00598-21

Managing Contamination and Diverse Bacterial Loads in 16S rRNA Deep Sequencing of Clinical Samples: Implications of the Law of Small Numbers
Cited by: 7
Author(s): Ruben Dyrhovden, Martin Rippin, Kjell Øvrebø, Randi Nygaard, Elling Ulvestad, Øyvind Kommedal
Software Mentions: 3
Published: about 5 years ago

10.1016/j.ebiom.2021.103421

Maternal fecal microbiome predicts gestational age, birth weight and neonatal growth in rural Zimbabwe.
Cited by: 26
Author(s): Ethan Gough, Thaddeus J. Edens, Hyun Min Geum, Iman Baharmand, Sandeep Singh Gill, Ruairi C. Robertson, Kuda Mutasa, Robert Ntozini, Laura E. Smith, Bernard Chasekwa, Florence D Majo, Naume V. Tavengwa, Batsirai Mutasa, Freddy Francis, Lynnea Carr, Joice Tome, Rebecca J. Stoltzfus, Lawrence H. Moulton, Andrew J. Prendergast, Jean H. Humphrey, Amee R. Manges, Shine Trial Team
Software Mentions: 3
Published: about 5 years ago

10.3390/cells9081828

Gene Expression Clustering and Selected Head and Neck Cancer Gene Signatures Highlight Risk Probability Differences in Oral Premalignant Lesions
Cited by: 12
Author(s): Andrea Carenzo, Mara Serena Serafini, Elisa Roca, Alberto Paderno, Davide Mattavelli, Chiara Romani, Pierre Saintigny, Senada Koljenović, Lisa Licitra, Loris De Cecco, Paolo Bossi
Software Mentions: 3
Published: about 6 years ago

10.3390/jcm10143168

Improvement of the Quality of Life in Aging by Stimulating Autobiographical Memory
Cited by: 4
Author(s): Alba Villasán Rueda, Antonio Sánchez Cabaco, Manuel Mejía-Ramírez, S. Henriques, Janessa O. Carvalho
Software Mentions: 3
Published: about 5 years ago

10.1128/mBio.02136-21

Protospacer-Adjacent Motif Specificity during Clostridioides difficile Type I-B CRISPR-Cas Interference and Adaptation
Cited by: 3
Author(s): Anna Maikova, Pierre Boudry, Anna Shiriaeva, Aleksandra Vasileva, Anaïs Boutserin, Sofia Medvedeva, Ekaterina Semenova, Konstantin Severinov, Olga Soutourina
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0193726

Overproduction of Sch9 leads to its aggregation and cell elongation in Saccharomyces cerevisiae
Cited by: 2
Author(s): Polina Drozdova, Polina Lipaeva, Tatyana Rogoza, Galina A. Zhouravleva, Stanislav A. Bondarev
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0227670

Torque teno virus viral load is related to age, CMV infection and HLA type but not to Alzheimer's disease
Cited by: 8
Author(s): Gabriel Westman, Catherine Schoofs, Martin Ingelsson, Josef D. Järhult, Shaman Muradrasoli
Software Mentions: 3
Published: over 6 years ago

10.3390/jcm10184039

Analysis of Muscle Activity Following the Application of Myofascial Release Techniques for Low-Back Pain—A Randomized-Controlled Trial
Cited by: 4
Author(s): Piotr Ożóg, Magdalena Weber‐Rajek, Agnieszka Radzimińska, Aleksander Goch
Software Mentions: 3
Published: almost 5 years ago

10.1038/hortres.2017.38

Applying generalized additive models to unravel dynamic changes in anthocyanin biosynthesis in methyl jasmonate elicited grapevine (Vitis vinifera cv. Gamay) cell cultures
Cited by: 13
Author(s): Nay Min Min Thaw Saw, C. Moser, Stefan Martens, Pietro Franceschi
Software Mentions: 3
Published: about 9 years ago

10.1155/2021/8870353

Bibliometrics Analysis of Diagnostic Test Accuracy Studies of Bladder Cancer
Cited by: 8
Author(s): Yuan Zhang, Yao Xu, Shuo Li
Software Mentions: 3
Published: about 5 years ago

10.1186/s12870-020-02604-z

Identification of quantitative trait nucleotides and candidate genes for soybean seed weight by multiple models of genome-wide association study
Cited by: 20
Author(s): Benjamin Karikari, Zili Wang, Yefei Zhou, Wenliang Yan, Jiao Feng, Tuanjie Zhao
Software Mentions: 3
Published: almost 6 years ago

10.3390/ijms21124376

Metabolomics Analysis Reveals Tissue-Specific Metabolite Compositions in Leaf Blade and Traps of Carnivorous Nepenthes Plants
Cited by: 12
Author(s): Alberto Dávila-Lara, Carlos E. Rodríguez López, Sarah E. O’Connor, Axel Mithöfer
Software Mentions: 3
Published: about 6 years ago

10.3389/fonc.2020.597569

Identification and Validation of an Autophagy-Related lncRNA Signature for Patients With Breast Cancer
Cited by: 13
Author(s): Ruyue Zhang, Qingwen Zhu, Dengke Yin, Zichang Yang, Jiahao Guo, Jingmin Zhang, Yubing Zhou, Jane Yu
Software Mentions: 3
Published: over 5 years ago

10.1128/JCM.01945-16

The EpiQuant Framework for Computing Epidemiological Concordance of Microbial Subtyping Data
Cited by: 2
Author(s): Benjamin M. Hetman, Steven K. Mutschall, James E. Thomas, Victor P. J. Gannon, Clifford G. Clark, Frank Pollari, Eduardo N. Taboada
Software Mentions: 3
Published: over 9 years ago

10.1186/s12986-020-00456-w

High fat diet significantly changed the global gene expression profile involved in hepatic drug metabolism and pharmacokinetic system in mice
Cited by: 15
Author(s): Yuqi He, Tao Yang, Yimei Du, Lin Q, Feifei Ma, Zunping Wu, Hua Ling, Li Yang, Zhengtao Wang, Qingdi Zhou, Guangbo Ge, Yuqi He
Software Mentions: 3
Published: over 6 years ago

10.1038/s41438-020-0322-4

Complex migration history is revealed by genetic diversity of tomato samples collected in Italy during the eighteenth and nineteenth centuries
Cited by: 2
Author(s): M. R. Ercolano, Antimo Di Donato, Walter Sanseverino, Maria Mafalda Barbella, Antonino De Natale, Luigi Frusciante
Software Mentions: 3
Published: about 6 years ago

10.1016/j.chom.2021.03.001

The SMC5/6 complex compacts and silences unintegrated HIV-1 DNA and is antagonized by Vpr
Cited by: 40
Author(s): Liane Dupont, Stuart Bloor, James C Williamson, Sergio Martínez Cuesta, Raven Shah, Ana Teixeira-Silva, Adi Naamati, Edward Jd Greenwood, Stefan G. Sarafianos, Nicholas J Matheson, Paul J. Lehner
Software Mentions: 3
Published: over 5 years ago

10.1128/JCM.02529-20

Assessing the Genetic Diversity of Austrian Corynebacterium diphtheriae Clinical Isolates, 2011 to 2019
Cited by: 9
Author(s): Justine Schaeffer, Steliana Huhulescu, Anna Stoeger, Franz Allerberger, Werner Ruppitsch
Software Mentions: 3
Published: over 5 years ago

10.5334/joc.183

Exploring Individual Differences in Recognizing Idiomatic Expressions in Context
Cited by: 1
Author(s): Mesian Tilmatine, Ferdy Hubers, Florian Hintz
Software Mentions: 3
Published: about 5 years ago

10.3390/genes11020234

The Genetic Basis of Natural Variation in Drosophila melanogaster Immune Defense against Enterococcus faecalis
Cited by: 14
Author(s): J. R. Chapman, Maureen A. Dowell, Rosanna Chan, Robert L. Unckless
Software Mentions: 3
Published: over 6 years ago

10.3389/fonc.2021.691771

Inflammatory Environment Promotes the Adhesion of Tumor Cells to Brain Microvascular Endothelial Cells
Cited by: 4
Author(s): Ke Wang, Shuang Dong, Doaa Higazy, Li-Jing Jin, Qing-Cui Zou, Haowei Chen, Aakif Inayat, Sheng Hu, Min Cui
Software Mentions: 3
Published: about 5 years ago

10.1038/s41421-020-00215-4

A novel multistage antiplasmodial inhibitor targeting Plasmodium falciparum histone deacetylase 1
Cited by: 20
Author(s): Zhenghui Huang, Ruoxi Li, Tongke Tang, Dazheng Ling, Manjiong Wang, Dandan Xu, Maoxin Sun, Lulu Zheng, Feng Zhu, Hui Min, Rachasak Boonhok, Yan Ding, Yang Wen, Zhong Chen, Xiaokang Li, Yuxi Chen, Taiping Liu, Jiping Han, Jun Miao, Qiang Fang, Yaming Cao, Yun Tang, Jie Cui, Wei Xu, Liwang Cui, Jin Zhu, Gary Wong, Jian Li, Lubin Jiang
Software Mentions: 3
Published: over 5 years ago

10.3389/fonc.2021.600243

Identification of Survival-Associated Gene Signature in Lung Cancer Coexisting With COPD
Cited by: 6
Author(s): Ti-Wei Miao, Long-Yi Du, Wei Xiao, Bing Mao, Yan Wang, Juanjuan Fu
Software Mentions: 3
Published: over 5 years ago

10.1093/jee/toz346

Comparing Prophylactic Versus Threshold-Based Insecticide Programs for Striped Cucumber Beetle (Coleoptera: Chrysomelidae) Management in Watermelon
Cited by: 13
Author(s): John J Ternest, Laura L. Ingwell, R. E. Foster, Ian Kaplan
Software Mentions: 3
Published: over 6 years ago

10.3389/fonc.2020.554759

Integrated Analysis of lncRNA–Mediated ceRNA Network in Lung Adenocarcinoma
Cited by: 90
Author(s): Xianxian Wu, Zhilin Sui, Hongdian Zhang, Ying Wang, Zhentao Yu
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0146706

Genetic Diversity Affects the Daily Transcriptional Oscillations of Marine Microbial Populations
Cited by: 6
Author(s): Irina N. Shilova, Julie Robidart, Edward F. DeLong, Jonathan P. Zehr
Software Mentions: 3
Published: over 10 years ago

10.2196/16159

Maintaining Physical Activity Level Through Team-Based Walking With a Mobile Health Intervention: Cross-Sectional Observational Study
Cited by: 3
Author(s): Yuri Hamamatsu, Hiroo Ide, Makoto Kakinuma, Yuji Furui
Software Mentions: 3
Published: about 6 years ago

10.1186/s13024-018-0274-4

Long-read sequencing across the C9orf72 ‘GGGGCC’ repeat expansion: implications for clinical use and genetic discovery efforts in human disease
Cited by: 90
Author(s): Mark T. W. Ebbert, Stefan L. Farrugia, Jonathon P. Sens, Karen Jansen-West, Tania F. Gendron, Mercedes Prudencio, Ian McLaughlin, Brett Bowman, Matthew G. Seetin, Mariely DeJesus-Hernandez, Jazmyne L. Jackson, Patricia E. Brown, Dennis W. Dickson, Marka van Blitterswijk, Rosa Rademakers, Leonard Petrucelli, John Denis Fryer
Software Mentions: 3
Published: about 8 years ago

10.1128/mBio.01228-21

Alternative Transmission Patterns in Independently Acquired Nutritional Cosymbionts of Dictyopharidae Planthoppers
Cited by: 15
Author(s): Anna Michalik, Diego Castillo Franco, Michał Kobiałka, Teresa Szklarzewicz, Adam Stroiński, Piotr Łukasik
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0249587

Species identification based on a semi-diagnostic marker: Evaluation of a simple conchological test for distinguishing blue mussels Mytilus edulis L. and M. trossulus Gould
Cited by: 5
Author(s): Vadim Khaitov, Julia Marchenko, Marina Katolikova, Risto Väinölä, Sarah E. Kingston, David B. Carlon, М. М. Ганцевич, Petr Strelkov
Software Mentions: 3
Published: about 5 years ago

10.1242/jeb.233403

Early developmental stages of native populations of <i>Ciona intestinalis</i> under increased temperature are affected by local habitat history
Cited by: 4
Author(s): Elizabeth A. Clutton, Gastón Alurralde, Tiago Repolho
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0251630

Framing the potential of public frameshift peptides as immunotherapy targets in colon cancer
Cited by: 3
Author(s): Ide Spaanderman, Fleur S. Peters, Aldo Jongejan, E. Redeker, Cornelis J.A. Punt, Adriaan D. Bins
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0042737

Climate and Weather Impact Timing of Emergence of Bats
Cited by: 58
Author(s): Winifred F. Frick, Phillip M. Stepanian, Jeffrey F. Kelly, Kenneth W. Howard, Charles M. Kuster, Thomas Kunz, Phillip B. Chilson
Software Mentions: 3
Published: about 14 years ago

10.1371/journal.pone.0163482

Using a Control to Better Understand Phyllosphere Microbiota
Cited by: 44
Author(s): Andrea Ottesen, S. Gorham, Elizabeth Reed, Michael J. Newell, Padmini Ramachandran, Travis Canida, Marc W. Allard, Peter W. Evans, Eric W. Brown, James R. White
Software Mentions: 3
Published: almost 10 years ago

10.1093/jxb/erv074

Evolution of US maize (Zea mays L.) root architectural and anatomical phenes over the past 100 years corresponds to increased tolerance of nitrogen stress
Cited by: 144
Author(s): Larry M. York, Tania Galindo-Castañeda, Jeffrey R. Schussler, Jonathan P. Lynch
Software Mentions: 3
Published: over 11 years ago

10.3389/fmicb.2019.00448

Multiple Recombination Events Drive the Current Genetic Structure of Xanthomonas perforans in Florida
Cited by: 40
Author(s): Sujan Timilsina, Juliana A. Pereira-Martin, Gerald V. Minsavage, Fernanda Iruegas-Bocardo, Peter Abrahamian, Neha Potnis, Bryan Kolaczkowski, Gary E. Vallad, Erica M. Goss, Jeffrey B. Jones
Software Mentions: 3
Published: over 7 years ago

10.1093/jxb/erw003

Leaf Length Tracker: a novel approach to analyse leaf elongation close to the thermal limit of growth in the field
Cited by: 29
Author(s): Sebastian Nagelmüller, Norbert Kirchgeßner, Steven Yates, Maya Hiltpold, Achim Walter
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0223992

To tweet or not to tweet, that is the question: A randomized trial of Twitter effects in medical education
Cited by: 10
Author(s): Lauren A. Maggio, Todd C. Leroux, Anthony R. Artino
Software Mentions: 3
Published: almost 7 years ago

10.1093/jxb/erx349

Transfer of a starch phenotype from wild wheat to bread wheat by deletion of a locus controlling B-type starch granule content
Cited by: 21
Author(s): Tansy Chia, Nikolai M Adamski, Benedetta Saccomanno, Andrew J. Greenland, Alastair Nash, Cristóbal Uauy, Kay Trafford
Software Mentions: 3
Published: almost 9 years ago

10.1186/s12986-016-0116-8

Prolonged transfer of feces from the lean mice modulates gut microbiota in obese mice
Cited by: 46
Author(s): Maria Kulecka, Agnieszka Paziewska, Natalia Żeber‐Lubecka, Filip Ambrożkiewicz, Michał Kopczyński, Urszula Kuklinska, Kazimiera Pyśniak, Marta Gajewska, Michał Mikula, Jerzy Ostrowski
Software Mentions: 3
Published: about 10 years ago

10.3390/molecules24224108

Concentration of Mercury in the Livers of Small Terrestrial Rodents from Rural Areas in Poland
Cited by: 9
Author(s): Maciej Durkalec, Agnieszka Nawrocka, J. Żmudzki, Aleksandra Filipek, Marcin Niemcewicz, Andrzej Posyniak
Software Mentions: 3
Published: almost 7 years ago

10.1002/cam4.1905

Construction of immune-related risk signature for renal papillary cell carcinoma
Cited by: 42
Author(s): Zhongyu Wang, Qian Song, Zaixing Yang, Jianing Chen, Jun Shang, Wen Ju
Software Mentions: 3
Published: over 7 years ago

10.3390/ijms22052424

Dysregulated CD38 Expression on Peripheral Blood Immune Cell Subsets in SLE
Cited by: 17
Author(s): Marie Burns, Lennard Ostendorf, Robert Biesen, Andreas Grützkau, Falk Hiepe, Henrik E. Mei, Tobias Alexander
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2020.596581

Characterization, Genetic Analyses, and Identification of QTLs Conferring Metabolic Resistance to a 4-Hydroxyphenylpyruvate Dioxygenase Inhibitor in Sorghum (Sorghum bicolor)
Cited by: 10
Author(s): Balaji Pandian, Aruna Varanasi, Amaranatha R. Vennapusa, Rajendran Sathishraj, Guifang Lin, Mingxia Zhao, Madison Tunnell, Tesfaye Tesso, Sanzhen Liu, P. V. Vara Prasad, Mithila Jugulam
Software Mentions: 3
Published: over 5 years ago

10.1093/jxb/eraa123

Pre-akinete formation in Zygnema sp. from polar habitats is associated with metabolite re-arrangement
Cited by: 18
Author(s): Erwann Arc, Martina Pichrtová, Ilse Kranner, Andreas Holzinger
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2020.622824

Genomic Insights Into the Lifestyles of Thaumarchaeota Inside Sponges
Cited by: 11
Author(s): Markus Haber, Ilia Burgsdorf, Kim M. Handley, Maxim Rubin‐Blum, Laura Steindler
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0219144

Glycemic control and lipid outcomes in children and adolescents with type 2 diabetes
Cited by: 11
Author(s): Mary Margaret Barr, Stella Aslibekyan, Ambika P. Ashraf
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2019.02333

Human Milk Microbiome and Maternal Postnatal Psychosocial Distress
Cited by: 42
Author(s): Pamela D. Browne, Marina Aparicio, Claudio Alba, Christine Hechler, Roseriet Beijers, Juan M. Rodríguez, Leónides Fernández, Carolina de Weerth
Software Mentions: 3
Published: almost 7 years ago

10.1128/mSphereDirect.00187-17

Phylogenetic Analyses Suggest that Factors Other Than the Capsid Protein Play a Role in the Epidemic Potential of GII.2 Norovirus
Cited by: 79
Author(s): Kentaro Tohma, Cara J. Lepore, Lauren A. Ford-Siltz, Gabriel I. Parra
Software Mentions: 3
Published: about 9 years ago

10.1155/2020/7352637

The Impact of Psoriasis and Metabolic Syndrome on the Systemic Inflammation and Oxidative Damage to Nucleic Acids
Cited by: 13
Author(s): Drahomíra Holmannová, Lenka Borská, Ctirad Andrýs, Pavel Borský, Jan Kremláček, Květoslava Hamáková, Vít Řeháček, Andrea Málková, Tereza Švadláková, Vladimír Palička, Jan Krejsek, Zdeněk Fiala
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2021.683410

Integrated Metagenomic Assessment of Multiple Pre-harvest Control Points on Lettuce Resistomes at Field-Scale
Cited by: 4
Author(s): Lauren Wind, Ishi Keenum, Suraj Gupta, Partha Pratim Ray, Katharine F. Knowlton, Monica A. Ponder, W. Cully Hession, Amy Pruden, Leigh‐Anne Krometis
Software Mentions: 3
Published: about 5 years ago

10.1002/cam4.961

Nonpromoter methylation of the CDKN2A gene with active transcription is associated with improved locoregional control in laryngeal squamous cell carcinoma
Cited by: 12
Author(s): Miriam M. Ben-Dayan, Thomas J. Ow, Thomas J. Belbin, Joshua Wetzler, Richard V. Smith, Geoffrey Childs, Brenda Diergaarde, D. Neil Hayes, Jennifer R. Grandis, Michael B. Prystowsky, Nicolas F. Schlecht
Software Mentions: 3
Published: over 9 years ago

10.3389/fpls.2020.00757

Fostering Conservation via an Integrated Use of Conventional Approaches and High-Throughput SPET Genotyping: A Case Study Using the Endangered Canarian Endemics Solanum lidii and S. vespertilio (Solanaceae)
Cited by: 10
Author(s): Pietro Gramazio, Ruth Jaén‐Molina, Santiago Vilanova, Jaime Prohens, Águedo Marrero, Juli Caujapé‐Castells, Gregory J. Anderson
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2020.00154

Ecological Differentiation in Two Major Freshwater Bacterial Taxa Along Environmental Gradients
Cited by: 15
Author(s): Julia K. Nuy, Matthias Hoetzinger, Martin W. Hahn, Daniela Beißer, Jens Boenigk
Software Mentions: 3
Published: over 6 years ago

10.3389/fpls.2019.01772

Coexpression of PalbHLH1 and PalMYB90 Genes From Populus alba Enhances Pathogen Resistance in Poplar by Increasing the Flavonoid Content
Cited by: 33
Author(s): Qiuxian Bai, Bingbing Duan, Jianchao Ma, Yannan Fen, Shujiao Sun, Qiming Long, Jiaojiao Lv, Dongshi Wan
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.ppat.1004809

Transgenic Expression of the Dicotyledonous Pattern Recognition Receptor EFR in Rice Leads to Ligand-Dependent Activation of Defense Responses
Cited by: 94
Author(s): Benjamin Schwessinger, Ofir Bahar, Nicholas Thomas, Nicholas Holton, Vladimir Nekrasov, Deling Ruan, Patrick E. Canlas, Arsalan Daudi, Young-Mo Kim, Vasanth Singan, Rita C. Kuo, Mansi Chovatia, Christopher Daum, Joshua L. Heazlewood, Cyril Zipfel, Pamela C. Ronald
Software Mentions: 3
Published: over 11 years ago

10.3390/s19204446

Capturing Maize Stand Heterogeneity Across Yield-Stability Zones Using Unmanned Aerial Vehicles (UAV)
Cited by: 14
Author(s): Guanyuan Shuai, Rafael A. Martinez-Feria, Jinshui Zhang, Shiming Li, Richard F. Price, Bruno Basso
Software Mentions: 3
Published: almost 7 years ago

10.1002/hbm.25036

Dynamic functional connectivity between nucleus accumbens and the central executive network relates to chronic cannabis use
Cited by: 8
Author(s): Hye Bin Yoo, Blake Edward Moya, Francesca M. Filbey
Software Mentions: 3
Published: over 6 years ago

10.1007/s10393-021-01533-z

Viral Prevalence in Wild Serval Population is Driven by Season and Sex
Cited by: 0
Author(s): Daan Loock, Emilio Rendón-Franco, Samual T. Williams, Johan Van Niekerk, Lourens H. Swanepoel
Software Mentions: 3
Published: over 5 years ago

10.3390/genes9060294

Tissue Specificity and Dynamics of Sex-Biased Gene Expression in a Common Frog Population with Differentiated, Yet Homomorphic, Sex Chromosomes
Cited by: 22
Author(s): Wen‐Juan Ma, Paris Veltsos, Melissa A. Toups, Nicolas Rodrigues, Roberto Sermier, Daniel L. Jeffries, Nicolas Perrin
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.ppat.1005273

Plasmodium P-Type Cyclin CYC3 Modulates Endomitotic Growth during Oocyst Development in Mosquitoes
Cited by: 60
Author(s): Magali Roques, Richard J. Wall, Alexander P. Douglass, Abhinay Ramaprasad, David Ferguson, Mbinda L. Kaindama, Lorenzo Brusini, Joshi Nimitray, Zineb Rchiad, Declan Brady, David S. Guttery, Sally P. Wheatley, Hiroyuki Yamano, Anthony A. Holder, Arnab Pain, Bill Wickstead, Rita Tewari
Software Mentions: 3
Published: almost 11 years ago

10.1111/1755-0998.13154

Chromosomal‐level reference genome of the incense tree <i>Aquilaria sinensis</i>
Cited by: 22
Author(s): Wenyan Nong, Sean T.S. Law, Hon Kit Wong, Tobias Baril, Thomas Swale, L.M. Chu, Alexander Hayward, David Tai-Wai Lau, Jerome H. L. Hui
Software Mentions: 3
Published: over 6 years ago

10.1155/2021/8849977

A Risk Signature with Autophagy-Related Long Noncoding RNAs for Predicting the Prognosis of Clear Cell Renal Cell Carcinoma: Based on the TCGA Database and Bioinformatics
Cited by: 14
Author(s): Yundong Xuan, Wei-Hao Chen, Kan Liu, Yu Tang Gao, Shidong Zuo, Baojun Wang, Xin Ma, Xu Zhang
Software Mentions: 3
Published: over 5 years ago

10.2807/1560-7917.ES.2020.25.45.1900414

Rates of increase of antibiotic resistance and ambient temperature in Europe: a cross-national analysis of 28 countries between 2000 and 2016
Cited by: 40
Author(s): Sarah F. McGough, Derek R. MacFadden, Mohammad W. Hattab, Kåre Mølbak, Mauricio Santillana
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.ppat.1005576

Transformed Recombinant Enrichment Profiling Rapidly Identifies HMW1 as an Intracellular Invasion Locus in Haemophilus influenzae
Cited by: 15
Author(s): Joshua Chang Mell, Cristina Viadas, Javier Moleres, Sunita Sinha, Ariadna Fernández-Calvet, Eric A. Porsch, Joseph W. St. Geme, Corey Nislow, Rosemary J. Redfield, Junkal Garmendia
Software Mentions: 3
Published: over 10 years ago

10.3389/fpls.2021.713667

Breeding With Major and Minor Genes: Genomic Selection for Quantitative Disease Resistance
Cited by: 18
Author(s): Lance F. Merrick, Adrienne B. Burke, Xianming Chen, Arron H. Carter
Software Mentions: 3
Published: about 5 years ago

10.3390/s19214814

Phenomic and Physiological Analysis of Salinity Effects on Lettuce
Cited by: 38
Author(s): Neil D. Adhikari, Ivan Šimko, Beiquan Mou
Software Mentions: 3
Published: almost 7 years ago

10.3389/fneur.2020.573575

Differential Glial Activation in Early Epileptogenesis—Insights From Cell-Specific Analysis of DNA Methylation and Gene Expression in the Contralateral Hippocampus
Cited by: 4
Author(s): Toni Berger, Magnus Dehli Vigeland, Hanne Sagsveen Hjorthaug, Cecilie G. Nome, Erik Taubøll, Kaja Kristine Selmer, Kjell Heuser
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2018.00176

Occurrence of Harmful Cyanobacteria in Drinking Water from a Severely Drought-Impacted Semi-arid Region
Cited by: 38
Author(s): Juline M. Walter, Fabyano Álvares Cardoso Lopes, Mônica Lopes-Ferreira, Leonardo Vidal, Luciana Leomil, Fabiana Cristina Silveira Alves de Melo, Girlene S. de Azevedo, Rossandra M. S. Oliveira, Alba J. Medeiros, Adriana Melo, Carlos Eduardo de Rezende, Amílcar Tanuri, Fabiano L. Thompson
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0151625

When Breathing Interferes with Cognition: Experimental Inspiratory Loading Alters Timed Up-and-Go Test in Normal Humans
Cited by: 38
Author(s): Marie-Cécile Niérat, Suela Demiri, Elise Dupuis-Lozeron, Gilles Allali, Capucine Morélot-Panzini, Thomas Similowski, Dan Adler
Software Mentions: 3
Published: over 10 years ago

10.3390/s19214634

Monitoring Water‐Soil Dynamics and Tree Survival Using Soil Sensors under a Big Data Approach
Cited by: 5
Author(s): Adrián Pascual, Rafael Rivera, Rodrigo Villalva Gomez, Susana Domínguez-Lerena
Software Mentions: 3
Published: almost 7 years ago

10.3389/fcell.2020.615671

Identification of lncRNA-mRNA Regulatory Module to Explore the Pathogenesis and Prognosis of Melanoma
Cited by: 17
Author(s): Jiaqi Zhang, Hui Liu, Wenhao Zhang, Yinfang Li, Zhipeng Fan, Hua Jiang, Judong Luo
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2015.01247

Genome-Wide Analysis of the AP2/ERF Superfamily Genes and their Responses to Abiotic Stress in Medicago truncatula
Cited by: 84
Author(s): Yongjun Shu, Ying Liu, Jun Zhang, Lili Song, Changhong Guo
Software Mentions: 3
Published: over 10 years ago

10.1186/s12979-020-00191-z

In-depth immune cellular profiling reveals sex-specific associations with frailty
Cited by: 16
Author(s): Leonard Daniël Samson, A. Boots, José A. Ferreira, H. Susan J. Picavet, Lia G. H. de Rond, Mary-lène de Zeeuw-Brouwer, W M Monique Verschuren, Anne‐Marie Buisman, Peter Engelfriet
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0222641

Automated clear cell renal carcinoma grade classification with prognostic significance
Cited by: 34
Author(s): Ke Tian, Christopher A. Rubadue, Douglas I. Lin, Mitko Veta, Michael E. Pyle, Humayun Irshad, Yujing J. Heng
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0160323

Essential Indicators Identifying Chronic Inorganic Mercury Intoxication: Pooled Analysis across Multiple Cross-Sectional Studies
Cited by: 29
Author(s): Doering Stefan, Stephan Blüml, Ursula Berger
Software Mentions: 3
Published: almost 10 years ago

10.1002/iid3.379

Prognostic value of lipid metabolism‐related genes in head and neck squamous cell carcinoma
Cited by: 13
Author(s): Ying Xiong, Shaohua Yu, Yisi Feng, Shipei Zhuo, Bozhen Cui, Zhigang Zhang
Software Mentions: 3
Published: over 5 years ago

10.1111/1755-0998.12674

Graphics for relatedness research
Cited by: 6
Author(s): Iván Galván-Femenía, Jan Graffelman, Carles Barceló-i-Vidal
Software Mentions: 3
Published: over 9 years ago

10.1002/iid3.407

Development of a prognostic index based on immunogenomic landscape analysis in glioma
Cited by: 2
Author(s): Haitao Luo, Chuming Tao, Peng Wang, Jingying Li, Kai Huang, Xiang Yang Zhu
Software Mentions: 3
Published: over 5 years ago

10.3389/fcell.2020.572628

DNA Methylation-Based Panel Predicts Survival of Patients With Clear Cell Renal Cell Carcinoma and Its Correlations With Genomic Metrics and Tumor Immune Cell Infiltration
Cited by: 4
Author(s): Xiaoping Li, Lingao Ju, Chen Chen, Tongzu Liu, Sheng Li, Xinghuan Wang
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.ppat.1007626

A core set of venom proteins is released by entomopathogenic nematodes in the genus Steinernema
Cited by: 52
Author(s): Dennis Chang, Lorrayne Serra, Dihong Lu, A Mortazavi, Adler R. Dillman
Software Mentions: 3
Published: over 7 years ago

10.1007/s10633-020-09814-8

Vision before and after scharioth macular lens implantation in patients with AMD: an electrophysiological study
Cited by: 1
Author(s): Jan Kremláček, Jana Nekolová, Markéta Středová, J. Langrová, Jana Szanyi, M Kuba, Zuzana Kubová, Vít F, Petr Voda, M Veselá, N Jirásková
Software Mentions: 3
Published: over 5 years ago

10.3390/nu11123019

Vitamin B12 Deficiency Is Prevalent Among Czech Vegans Who Do Not Use Vitamin B12 Supplements
Cited by: 17
Author(s): Eliška Selinger, Tilman Kühn, Marie Procházková, M Andĕl, Jan Gojda
Software Mentions: 3
Published: over 6 years ago

10.1007/s00394-019-02086-2

Creatinine, total cysteine and uric acid are associated with serum retinol in patients with cardiovascular disease
Cited by: 8
Author(s): Trond E. Olsen, Kathrine J. Vinknes, Rune Blomhoff, Vegard Lysne, Øivind Midttun, Indu Dhar, Per Magne Ueland, Gard Frodahl Tveitevåg Svingen, Eva Ringdal Pedersen, Drevon Ca, Helga Refsum, Ottar Nygård
Software Mentions: 3
Published: almost 7 years ago

10.3389/fpls.2017.01199

Evidence for Active Uptake and Deposition of Si-based Defenses in Tall Fescue
Cited by: 49
Author(s): Emma McLarnon, Simon J. McQueen‐Mason, Ingo Lenk, Susan Hartley
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.ppat.1008216

Novel RNA viruses associated with Plasmodium vivax in human malaria and Leucocytozoon parasites in avian disease
Cited by: 52
Author(s): Justine Charon, Matthew J. Grigg, John Sebastian Eden, Kim A. Piera, Hafsa Rana, Timothy William, Karrie Rose, Miles P. Davenport, Nicholas M. Anstey, Edward C. Holmes
Software Mentions: 3
Published: over 6 years ago

10.3390/ijms22052630

Population-Predicted MHC Class II Epitope Presentation of SARS-CoV-2 Structural Proteins Correlates to the Case Fatality Rates of COVID-19 in Different Countries
Cited by: 8
Author(s): Chunguang Liang, Elena Bencúrová, Eric Psota, Priya Neurgaonkar, Martina Prelog, Carsten Scheller, Thomas Dandekar
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2021.724042

Transcriptomic Profile of Mycobacterium smegmatis in Response to an Imidazo[1,2-b][1,2,4,5]tetrazine Reveals Its Possible Impact on Iron Metabolism
Cited by: 0
Author(s): Aleksey A. Vatlin, Egor Shitikov, Mohd Shahbaaz, Dmitry Bespiatykh, Ksenia M. Klimina, Alan Christoffels, В. Н. Даниленко, Д. А. Маслов
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0101777

Rapid Phenotypic and Genomic Change in Response to Therapeutic Pressure in Prostate Cancer Inferred by High Content Analysis of Single Circulating Tumor Cells
Cited by: 123
Author(s): Angel E. Dago, Asya Stepansky, Anders Carlsson, Madelyn Luttgen, Jude Kendall, Timour Baslan, Anand Kolatkar, Michael Wigler, Kelly Bethel, Mitchell E. Gross, James Hicks, Peter Kühn
Software Mentions: 3
Published: about 12 years ago

10.3390/ijms22063002

Comparative Transcriptome and Expression Profiling of Resistant and Susceptible Banana Cultivars during Infection by Fusarium oxysporum
Cited by: 16
Author(s): Manisha Kaushal, George Mahuku, Rony Swennen
Software Mentions: 3
Published: over 5 years ago

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