cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1111/mpp.12867

Suppression of abscisic acid biosynthesis at the early infection stage of Verticillium longisporum in oilseed rape (Brassica napus)
Cited by: 9
Author(s): Falk Hubertus Behrens, Dirk Schenke, Roxana Hossain, Wanzhi Ye, Markus Schemmel, Thorsten Bergmann, Claudia Häder, Yan Zhao, Lena Ladewig, Wenxuan Zhu, Daguang Cai
Software Mentions: 3
Published: over 6 years ago

10.1128/JB.00607-20

Alkaline pH Increases Swimming Speed and Facilitates Mucus Penetration for Vibrio cholerae
Cited by: 9
Author(s): Nguyen T. Q. Nhu, John S. Lee, Helen J. Wang, Y. Dufour
Software Mentions: 3
Published: over 5 years ago

10.1074/jbc.M114.634816

Early Growth Response Genes 2 and 3 Regulate the Expression of Bcl6 and Differentiation of T Follicular Helper Cells
Cited by: 26
Author(s): Ane Ogbe, Tizong Miao, Alistair L. J. Symonds, Becky Omodho, Randeep Singh, Punamdip Bhullar, Suling Li, Ping Wang
Software Mentions: 3
Published: almost 11 years ago

10.15252/msb.20156198

Single‐cell polyadenylation site mapping reveals 3′ isoform choice variability
Cited by: 54
Author(s): Lars Velten, Simon Anders, Aleksandra Pękowska, Aino I Järvelin, Wolfgang Huber, Vicent Pelechano, Lars M. Steinmetz
Software Mentions: 3
Published: about 11 years ago

10.1186/s13018-020-01965-3

Identification of potential specific biomarkers and key signaling pathways between osteogenic and adipogenic differentiation of hBMSCs for osteoporosis therapy
Cited by: 9
Author(s): Jianjun Wu, Peian Cai, Zhenhui Lu, Zhang Zhi, Xixi He, Bikang Zhu, Li Zheng, Jinmin Zhao
Software Mentions: 3
Published: almost 6 years ago

10.7554/eLife.67460

Combination of inflammatory and vascular markers in the febrile phase of dengue is associated with more severe outcomes
Cited by: 7
Author(s): Nguyen Lam Vuong, Phung Khanh Lam, Damien Ming, Huynh Thi Le Duyen, Nguyet Minh Nguyen, Dong Thi Hoai Tam, Kien Duong Thi Hue, Nguyen Vinh Chau, Ngoun Chanpheaktra, Lucy Chai See Lum, Ernesto Pleités, Cameron P. Simmons, Kerstin Rosenberger, Thomas Jaenisch, David A. Bell, Nathalie Acestor, Christine Halleux, Piero Olliaro, Bridget Wills, Ronald B. Geskus, Sophie Yacoub
Software Mentions: 3
Published: about 5 years ago

10.1007/s00421-021-04744-y

Short-term heat acclimation preserves knee extensor torque but does not improve 20 km self-paced cycling performance in the heat
Cited by: 4
Author(s): John O. Osborne, Ian Stewart, David N Borg, Kenneth W. Beagley, Robert L. Buhmann, Geoffrey M. Minett
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-020-69721-5

Intermittent meromixis controls the trophic state of warming deep lakes
Cited by: 19
Author(s): Maximilian P. Lau, Giulia Valerio, Marco Pilotti, Michael Hupfer
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2018.00782

Distribution Patterns of Polyphosphate Metabolism Pathway and Its Relationships With Bacterial Durability and Virulence
Cited by: 32
Author(s): Liang Wang, Jiawei Yan, Michael J. Wise, Qinghua Liu, James Asenso, Yue Huang, Shiyun Dai, Zhanzhong Liu, Yan Du, Daoquan Tang
Software Mentions: 3
Published: about 8 years ago

10.15252/msb.20209866

TATA and paused promoters active in differentiated tissues have distinct expression characteristics
Cited by: 12
Author(s): Vivekanandan Ramalingam, Malini Natarajan, Jeff Johnston, Julia Zeitlinger
Software Mentions: 3
Published: over 5 years ago

10.15252/msb.20209945

MicroRNA governs bistable cell differentiation and lineage segregation via a noncanonical feedback
Cited by: 16
Author(s): Chung-Jung Li, Ee Shan Liau, Yi-Han Lee, Yang-Zhe Huang, Ziyi Liu, Andrew Willems, Victoria C. Garside, Edwina McGlinn, Jun-An Chen, Tian Hong
Software Mentions: 3
Published: about 5 years ago

10.15252/msb.20167323

A living vector field reveals constraints on galactose network induction in yeast
Cited by: 13
Author(s): Sarah R. Stockwell, Scott A. Rifkin
Software Mentions: 3
Published: over 9 years ago

10.3389/fmicb.2021.628055

CAZymes in Maribacter dokdonensis 62–1 From the Patagonian Shelf: Genomics and Physiology Compared to Related Flavobacteria and a Co-occurring Alteromonas Strain
Cited by: 11
Author(s): Laura Wolter, Maximilian Mitulla, Jovan Kalem, Rolf Daniel, Meinhard Simon, Matthias Wietz
Software Mentions: 3
Published: about 5 years ago

10.7554/eLife.38621

CD95/Fas ligand mRNA is toxic to cells
Cited by: 32
Author(s): William Putzbach, Ashley Haluck-Kangas, Quan Gao, Aishe A. Sarshad, Elizabeth T. Bartom, Austin Stults, Abdul Qadir, Markus Hafner, Marcus E. Peter
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-020-69441-w

Elevational is the main factor controlling the soil microbial community structure in alpine tundra of the Changbai Mountain
Cited by: 37
Author(s): Mingze Tang, Lin Li, Xiaolong Wang, Jian Wei You, Jiangnan Li, Xia Chen
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-020-68766-w

Trajectory analysis quantifies transcriptional plasticity during macrophage polarization
Cited by: 47
Author(s): Serena X. Liu, Heather H. Gustafson, Dana L. Jackson, Suzie H. Pun, Cole Trapnell
Software Mentions: 3
Published: almost 6 years ago

10.3897/mycokeys.43.25090

New host associations and a novel species for the gall-inducing acacia rust genus Ravenelia in South Africa
Cited by: 7
Author(s): Malte Ebinghaus, Wolfgang D. Maier, Michael J. Wingfield, Dominik Begerow
Software Mentions: 3
Published: over 7 years ago

10.1002/jcsm.12099

Expression of protocadherin gamma in skeletal muscle tissue is associated with age and muscle weakness
Cited by: 48
Author(s): Roland W. J. Hangelbroek, Parastoo Fazelzadeh, Michael Tieland, Mark V. Boekschoten, Guido Hooiveld, John van Duynhoven, James A. Timmons, Lex B. Verdijk, Lisette C. P. G. M. de Groot, Luc J. C. van Loon, Michael Müller
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0140964

Influence of Development and Dietary Phospholipid Content and Composition on Intestinal Transcriptome of Atlantic Salmon (Salmo salar)
Cited by: 30
Author(s): Christian De Santis, John F. Taylor, Laura Martínez-Rubio, Sebastián Boltaña, Douglas R. Tocher
Software Mentions: 3
Published: over 10 years ago

10.7150/jca.35801

Identification of a six-lncRNA signature based on a competing endogenous RNA network for predicting the risk of tumour recurrence in bladder cancer patients
Cited by: 8
Author(s): Danfeng Zhao, Qiang Peng, Lu Wang, Cong Li, Yulin Lv, Yong Liu, Zhichao Wang, Ruizhe Fang, Jiaqi Wang, Zhongqing Liu, Wanhai Xu
Software Mentions: 3
Published: over 6 years ago

10.7150/jca.33805

Clinical prognostic implications of EPB41L4A expression in multiple myeloma
Cited by: 5
Author(s): Weilong Zhang, Rui Lai, Xue He, Xiaoni Liu, Ye Zhang, Zuozhen Yang, Ping Yang, Jing Wang, Kai Hu, Xiaoliang Yuan, Xiuru Zhang, Weiyou Liu, Hongmei Jing
Software Mentions: 3
Published: over 6 years ago

10.1186/s13018-019-1182-1

Identify differential gene expressions in fatty infiltration process in rotator cuff
Cited by: 5
Author(s): Pengfei Hu, Lifeng Jiang, Lidong Wu
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-020-67970-y

The probabilistic backbone of data-driven complex networks: an example in climate
Cited by: 3
Author(s): Catharina Elisabeth Graafland, José Manuel Gutiérrez, Juan M. López, Diego Pazó, Miguel A. Rodrı́guez
Software Mentions: 3
Published: almost 6 years ago

10.1080/03009734.2020.1793039

Work at inpatient care units is associated with an increased risk of SARS-CoV-2 infection; a cross-sectional study of 8679 healthcare workers in Sweden
Cited by: 24
Author(s): Anna-Karin Lidström, Fredrik Sund, Bo Albinsson, Johan Lindbäck, Gabriel Westman
Software Mentions: 3
Published: almost 6 years ago

10.7150/jca.39467

Prognostic role of ACTL10 in Cytogenetic Normal Acute Myeloid Leukemia
Cited by: 3
Author(s): Rui Lai, Weilong Zhang, Xue He, Xinhui Liao, Xiaoni Liu, Wei Fu, Ping Yang, Jing Wang, Kai Hu, Xiaoliang Yuan, Xiuru Zhang, Hongmei Jing, Weiyou Liu
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0247495

Change detection of auditory tonal patterns defined by absolute versus relative pitch information. A combined behavioural and EEG study
Cited by: 3
Author(s): Nina Coy, M. K. M. Bader, Erich Schröger, Sabine Grimm
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0151625

When Breathing Interferes with Cognition: Experimental Inspiratory Loading Alters Timed Up-and-Go Test in Normal Humans
Cited by: 38
Author(s): Marie-Cécile Niérat, Suela Demiri, Elise Dupuis-Lozeron, Gilles Allali, Capucine Morélot-Panzini, Thomas Similowski, Dan Adler
Software Mentions: 3
Published: over 10 years ago

10.1136/bmj.k5222

Common conditions associated with hereditary haemochromatosis genetic variants: cohort study in UK Biobank
Cited by: 103
Author(s): Luke C. Pilling, Jone Tamosauskaite, Garan Jones, Andrew R. Wood, Lindsay Jones, Chai-Ling Kuo, George A. Kuchel, Luigi Ferrucci, David Melzer
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0222641

Automated clear cell renal carcinoma grade classification with prognostic significance
Cited by: 34
Author(s): Ke Tian, Christopher A. Rubadue, Douglas I. Lin, Mitko Veta, Michael E. Pyle, Humayun Irshad, Yujing J. Heng
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0160323

Essential Indicators Identifying Chronic Inorganic Mercury Intoxication: Pooled Analysis across Multiple Cross-Sectional Studies
Cited by: 29
Author(s): Doering Stefan, Stephan Blüml, Ursula Berger
Software Mentions: 3
Published: almost 10 years ago

10.1186/s12575-020-00125-5

Combination of Size-Exclusion Chromatography and Ultracentrifugation Improves the Proteomic Profiling of Plasma-Derived Small Extracellular Vesicles
Cited by: 33
Author(s): Rui Wei, Libo Zhao, Guanyi Kong, Xiang Liu, Shoumin Zhu, Shutian Zhang, Li Min
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2020.581219

Investigation of Physicochemical Indices and Microbial Communities in Termite Fungus-Combs
Cited by: 6
Author(s): Guiying Yang, Farhan Ahmad, Qihuan Zhou, Meixia Guo, Shiyou Liang, Hassan Ga’al, Jianchu Mo
Software Mentions: 3
Published: over 5 years ago

10.3390/vaccines8020164

New Insights on the Emerging Genomic Landscape of CXCR4 in Cancer: A Lesson from WHIM
Cited by: 9
Author(s): Stefania Scala, Crescenzo D’Alterio, Samantha Milanesi, Alessandra Castagna, Roberta Carriero, Floriana Maria Farina, Massimo Locati, Elena Monica Borroni
Software Mentions: 3
Published: about 6 years ago

10.7150/jca.51851

Bioinformatics analysis of lncRNA‑associated ceRNA network in melanoma
Cited by: 8
Author(s): Yi Ding, Min Li, Tuersong Tayier, Meilin Zhang, Long Chen, Shumei Feng
Software Mentions: 3
Published: over 5 years ago

10.3390/vaccines8040655

Immune Checkpoint Blockade Enhances Immune Activity of Therapeutic Lung Cancer Vaccine
Cited by: 3
Author(s): Pournima Kadam, Ram Pyare Singh, Michael Davoodi, Jay M. Lee, Maie St. John, Sherven Sharma
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0197400

Prevalence and outcomes of proton pump inhibitor associated hypomagnesemia in chronic kidney disease
Cited by: 10
Author(s): Jane Hughes, Diana Chiu, P A Kalra, Darren Green
Software Mentions: 3
Published: about 8 years ago

10.3390/vaccines9030300

Factors Associated with COVID-19 Vaccine Hesitancy
Cited by: 404
Author(s): Patrícia Soares, Jorge Luiz da Rocha, Marta Moniz, Ana Gama, P.A. Laires, Ana Rita Pedro, Sónia Dias, Andreia Leite, Carla Nunes
Software Mentions: 3
Published: over 5 years ago

10.7150/jca.50472

High Expression of RhoBTB3 Predicts Favorable Chemothrapy Outcomes in non-M3 Acute Myeloid Leukemia
Cited by: 3
Author(s): Shuanghui Yang, Wei Liu, Jie Peng, Yajing Xu, Yanfeng Liu, Yan Li, Minyuan Peng, Zhao Ouyang, Cong Chen, Enyi Liu
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-020-67114-2

Identification of key genes in ruptured atherosclerotic plaques by weighted gene correlation network analysis
Cited by: 16
Author(s): Biao Xu, Rui Li, Chunxia Huang, Binsheng He, Guangyi Li, Hong‐Shuo Sun, Zhong‐Ping Feng, Meihua Bao
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0198156

Time course metabolome of Roux-en-Y gastric bypass confirms correlation between leptin, body weight and the microbiome
Cited by: 14
Author(s): Loqmane Seridi, Gregory C. Leo, G. Lynis Dohm, Walter J. Pories, James M. Lenhard
Software Mentions: 3
Published: about 8 years ago

10.1038/s41598-020-67487-4

Immune status, and not HIV infection or exposure, drives the development of the oral microbiota
Cited by: 14
Author(s): Modupe Coker, Emmanuel F. Mongodin, Samer S. El-Kamary, Paul Akhigbe, ON Obuekwe, AI Omoigberale, Patricia Langenberg, Cyril O. Enwonwu, Lauren E. Hittle, William A. Blattner, Manhattan Charurat
Software Mentions: 3
Published: almost 6 years ago

10.7150/jca.60647

FOXD3-induced miR-133a blocks progression and metastasis of colorectal cancer through regulating UBA2
Cited by: 4
Author(s): Yuanfang Cheng, Yajuan Wang, Yuanzun Cheng, Qingmei Yang, Lejing Zhang, Zhaoxi Li, Jiancheng Cheng
Software Mentions: 3
Published: over 5 years ago

10.1093/database/baab057

COVIDium: a COVID-19 resource compendium
Cited by: 6
Author(s): Rohit Satyam, Malik Yousef, Sahar Qazi, Adil Manzoor Bhat, Khalid Raza
Software Mentions: 3
Published: almost 5 years ago

10.3390/vaccines9040332

Awareness, Attitudes and Clinical Practices Regarding Human Papillomavirus Vaccination among General Practitioners and Pediatricians in Switzerland
Cited by: 2
Author(s): Levy Jäger, Oliver Senn, Thomas Rosemann, Andreas Plate
Software Mentions: 3
Published: about 5 years ago

10.7717/peerj.8205

Reduced GRAMD1C expression correlates to poor prognosis and immune infiltrates in kidney renal clear cell carcinoma
Cited by: 12
Author(s): Haiyan Hao, Ziheng Wang, Shengxiang Ren, Hanyu Shen, Hua Xian, Wenliang Ge, Wei Wang
Software Mentions: 3
Published: over 6 years ago

10.3389/fcell.2020.615671

Identification of lncRNA-mRNA Regulatory Module to Explore the Pathogenesis and Prognosis of Melanoma
Cited by: 17
Author(s): Jiaqi Zhang, Hui Liu, Wenhao Zhang, Yinfang Li, Zhipeng Fan, Hua Jiang, Judong Luo
Software Mentions: 3
Published: over 5 years ago

10.7717/peerj.11409

Evaluating the cleavage efficacy of CRISPR-Cas9 sgRNAs targeting ineffective regions of Arabidopsis thaliana genome
Cited by: 3
Author(s): Afia Malik, Alvina Gul, Faiza Munir, Rabia Amir, Hadi Alipour, Mustafeez Mujtaba Babar, Syeda Marriam Bakhtiar, Rehan Zafar Paracha, Zoya Khalid, Muhammad Qasim Hayat
Software Mentions: 3
Published: about 5 years ago

10.7717/peerj.10302

Characterization and comparison of the bacterial communities of rhizosphere and bulk soils from cadmium-polluted wheat fields
Cited by: 12
Author(s): Li Song, Zhenzhi Pan, Yi Dai, Lin Chen, Li Zhang, Qilin Liao, Xi Yu, Hongyan Guo, Guisheng Zhou
Software Mentions: 3
Published: over 5 years ago

10.7717/peerj.3773

Canopy soil bacterial communities altered by severing host tree limbs
Cited by: 9
Author(s): Cody R. Dangerfield, Nalini M. Nadkarni, William J. Brazelton
Software Mentions: 3
Published: almost 9 years ago

10.1083/jcb.201702099

BAIAP3, a C2 domain–containing Munc13 protein, controls the fate of dense-core vesicles in neuroendocrine cells
Cited by: 44
Author(s): Xingmin Zhang, Shan Jiang, Kelly A. Mitok, Lingjun Li, Alan D. Attie, Thomas F.J. Martin
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.pone.0228073

lillies: An R package for the estimation of excess Life Years Lost among patients with a given disease or condition
Cited by: 33
Author(s): Oleguer Plana‐Ripoll, Vladimir Canudas-Romo, Nanna Weye, Thomas Munk Laursen, John J. McGrath, Per Kragh Andersen
Software Mentions: 3
Published: over 6 years ago

10.1083/jcb.201704102

Loss of E-cadherin provides tolerance to centrosome amplification in epithelial cancer cells
Cited by: 57
Author(s): Alexander D. Rhys, Pedro T. Monteiro, Christopher M. Smith, Malti Vaghela, Teresa Arnandis, Takuya Kato, Birgit Leitinger, Erik Sahai, Andrew D. McAinsh, Guillaume Charras, Susana A. Godinho
Software Mentions: 3
Published: over 8 years ago

10.3389/fphys.2020.00991

Protein Stores Regulate When Reproductive Displays Begin in the Male Caribbean Fruit Fly
Cited by: 6
Author(s): Clancy A. Short, John D. Hatle, Daniel A. Hahn
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-019-44882-0

Pleomorphic Adenoma Gene 1 Is Needed For Timely Zygotic Genome Activation and Early Embryo Development
Cited by: 15
Author(s): Elo Madissoon, Anastasios Damdimopoulos, Shintaro Katayama, Kaarel Krjutškov, Elisabet Einarsdottir, Katariina Mamia, Bert De Groef, Outi Hovatta, Juha Kere, Pauliina Damdimopoulou
Software Mentions: 3
Published: about 7 years ago

10.1242/bio.030056

Food supply and size class depending variations in phytodetritus intake in the benthic foraminifer Ammonia tepida
Cited by: 9
Author(s): Julia Wukovits, Patrick Bukenberger, Annekatrin J. Enge, Maximillian Gerg, Wolfgang Wanek, Margarete Watzka, Petra Heinz
Software Mentions: 3
Published: over 8 years ago

10.7717/peerj.9622

Gut microbiota of obese and diabetic Thai subjects and interplay with dietary habits and blood profiles
Cited by: 7
Author(s): Lucsame Gruneck, Niwed Kullawong, Kongkiat Kespechara, Siam Popluechai
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41431-020-0693-x

Cultural variation impacts paternal and maternal genetic lineages of the Hmong-Mien and Sino-Tibetan groups from Thailand
Cited by: 15
Author(s): Wibhu Kutanan, Rasmi Shoocongdej, Metawee Srikummool, Alexander Hübner, Thanatip Suttipai, Suparat Srithawong, Jatupol Kampuansai, Mark Stoneking
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2015.00199

Genomic characteristics and environmental distributions of the uncultivated Far-T4 phages
Cited by: 16
Author(s): Simon Roux, François Enault, Viviane Ravet, Olivier Pereira, Matthew B. Sullivan
Software Mentions: 3
Published: over 11 years ago

10.1038/s41598-019-44409-7

Red muscle activity in bluegill sunfish Lepomis macrochirus during forward accelerations
Cited by: 14
Author(s): Margot A. B. Schwalbe, Alexandra Leigh Boden, Tyler N. Wise, Eric D. Tytell
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2020.574815

The Response of Estuarine Ammonia-Oxidizing Communities to Constant and Fluctuating Salinity Regimes
Cited by: 5
Author(s): João P. Santos, António G G Sousa, Hugo Leonardo Coelho Ribeiro, Catarina Magalhães
Software Mentions: 3
Published: over 5 years ago

10.2807/1560-7917.ES.2020.25.45.1900414

Rates of increase of antibiotic resistance and ambient temperature in Europe: a cross-national analysis of 28 countries between 2000 and 2016
Cited by: 40
Author(s): Sarah F. McGough, Derek R. MacFadden, Mohammad W. Hattab, Kåre Mølbak, Mauricio Santillana
Software Mentions: 3
Published: over 5 years ago

10.3389/fphys.2020.567312

Altered Cardiac Autonomic Regulation in Overweight and Obese Subjects: The Role of Age-and-Gender-Adjusted Statistical Indicators of Heart Rate Variability and Cardiac Baroreflex
Cited by: 6
Author(s): Nadia Solaro, Massimo Pagani, Daniela Lucini
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0091041

Variation in RNA-Seq Transcriptome Profiles of Peripheral Whole Blood from Healthy Individuals with and without Globin Depletion
Cited by: 70
Author(s): Heesun Shin, Casey P. Shannon, Nick Fishbane, Jian Ruan, Mi Zhou, Robert Balshaw, J. Wilson-McManus, Raymond T. Ng, Bruce M. McManus, Scott J. Tebbutt
Software Mentions: 3
Published: over 12 years ago

10.1002/ps.6433

Remote monitoring of Cydia pomonella adults among an assemblage of nontargets in sex pheromone‐kairomone‐baited smart traps
Cited by: 8
Author(s): Michele Preti, Riccardo Favaro, A. L. Knight, Sergio Angeli
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0186683

Coastal livelihood transitions under globalization with implications for trans-ecosystem interactions
Cited by: 6
Author(s): Daniel Kramer, Kara Stevens, Nigel Williams, Seeta A. Sistla, Adam B. Roddy, Gerald R. Urquhart
Software Mentions: 3
Published: over 8 years ago

10.3390/cancers8060055

RASSF1A Site-Specific Methylation Hotspots in Cancer and Correlation with RASSF1C and MOAP-1
Cited by: 13
Author(s): Natalia Volodko, Mohamed Salla, Alaa Zare, El-Arbi Abulghasem, Krista Vincent, Matthew G.K. Benesch, Todd McMullen, Oliver F. Bathe, Lynne-Marie Postovit, Shairaz Baksh
Software Mentions: 3
Published: about 10 years ago

10.1111/jcmm.15957

Prediction of a competing endogenous RNA co‐expression network as a prognostic marker in glioblastoma
Cited by: 13
Author(s): Qing Peng, Runmin Li, Ying Liu, Xianghong Xu, Wensi Ni, Huiran Lin, Ning Liang
Software Mentions: 3
Published: over 5 years ago

10.1111/jcmm.15973

Integrative analysis provides multi‐omics evidence for the pathogenesis of placenta percreta
Cited by: 6
Author(s): Qingyuan Jiang, Lei Dai, Na Chen, Junshu Li, Y Gao, Jing Zhao, Ding Li, Chengbin Xie, Xiaolian Yi, Hongxin Deng, Xiaodong Wang
Software Mentions: 3
Published: over 5 years ago

10.3390/ph14040351

Absence of Association between Methylene Blue Reduced Susceptibility and Polymorphisms in 12 Genes Involved in Antimalarial Drug Resistance in African Plasmodium falciparum
Cited by: 2
Author(s): Mathieu Gendrot, Océane Delandre, M Robert, Francis Tsombeng Foguim, B. Nicolas, Rémy Amalvict, Isabelle Fonta, Joël Mosnier, Marylin Madamet, Bruno Pradines
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-42862-y

A longitudinal characterization of the Non-Cystic Fibrosis Bronchiectasis airway microbiome
Cited by: 29
Author(s): Taylor E Woo, Rachel Lim, Alya Heirali, Nicole Acosta, Harvey Rabin, Christopher H. Mody, Ranjani Somayaji, Michael G. Surette, Christopher D. Sibley, Douglas G. Storey, Michael D. Parkins
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-019-43110-z

High-throughput sequencing reveals the diversity and community structure of rhizosphere fungi of Ferula Sinkiangensis at different soil depths
Cited by: 25
Author(s): Tao Zhang, Zhongke Wang, Xinhua Lv, Yang Li, Zhuang Li
Software Mentions: 3
Published: about 7 years ago

10.18632/oncotarget.25966

Online structure-based screening of purchasable approved drugs and natural compounds: retrospective examples of drug repositioning on cancer targets
Cited by: 24
Author(s): Nathalie Lagarde, Julien Rey, Aram G. Gyulkhandanyan, Pierre Tufféry, Maria A. Miteva, Bruno O. Villoutreix
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0256784

Immunometabolic signatures predict risk of progression to sepsis in COVID-19
Cited by: 19
Author(s): Ana Sofía Herrera-Van Oostdam, Julio Enrique Castañeda-Delgado, Juan José Oropeza-Valdez, Juan Carlos Borrego, Joel Monárrez‐Espino, Jiamin Zheng, Rupasri Mandal, Lun Zhang, Elizabeth Soto-Guzmán, Julio César Fernández-Ruiz, Fátima de Lourdes Ochoa-González, Flor María Trejo Medinilla, Jesús Adrián López, David S. Wishart, José Antonio Enciso-Moreno, Yamilé López‐Hernández
Software Mentions: 3
Published: almost 5 years ago

10.1111/jcmm.16323

Construction of a robust prognostic model for adult adrenocortical carcinoma: Results from bioinformatics and real‐world data
Cited by: 8
Author(s): Xi Tian, Wenhao Xu, Aihetaimujiang Anwaier, Hongkai Wang, Fangning Wan, Dalong Cao, Wenjie Luo, Guohai Shi, Yuanyuan Qu, Hai-Liang Zhang, Dingwei Ye
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2019.01603

Next Generation DNA-Seq and Differential RNA-Seq Allow Re-annotation of the Pyrococcus furiosus DSM 3638 Genome and Provide Insights Into Archaeal Antisense Transcription
Cited by: 14
Author(s): Felix Grünberger, Robert Reichelt, Boyke Bunk, Cathrin Spröer, Jörg Overmann, Reinhard Rachel, Dina Grohmann, Winfried Hausner
Software Mentions: 3
Published: almost 7 years ago

10.1186/s12967-021-02972-6

The germline/somatic DNA damage repair gene mutations modulate the therapeutic response in Chinese patients with advanced pancreatic ductal adenocarcinoma
Cited by: 9
Author(s): Lin Shui, Xiaofen Li, Yang Peng, Jiangfang Tian, Shuangshuang Li, Du He, Ang Li, Bole Tian, Mao Li, Heli Gao, Ning An, Cheng Yi, Dan Cao
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0082727

Tuberculosis Screening by Tuberculosis Skin Test or QuantiFERON®-TB Gold In-Tube Assay among an Immigrant Population with a High Prevalence of Tuberculosis and BCG Vaccination
Cited by: 22
Author(s): John A. Painter, Edward A. Graviss, Hoang Hoa Hai, Duong Thi Cam Nhung, Tran Thị Thanh Nga, Ngan P. Ha, Kirsten Wall, Le Thien Huong Loan, Matt Parker, Lilia P. Manangan, Rick O’Brien, Susan A. Maloney, Robert M. Hoekstra, Randall Reves
Software Mentions: 3
Published: over 12 years ago

10.1111/jcmm.16594

Single‐cell transcriptome analysis of human oocyte ageing
Cited by: 16
Author(s): Lihua Yuan, Ping Yin, Yan Hua, Xiufang Zhong, Chun‐Xia Ren, Kai Li, Boon Chin Heng, Wuwen Zhang, Guoqing Tong
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2020.557342

The Endogenous Alterations of the Gut Microbiota and Feces Metabolites Alleviate Oxidative Damage in the Brain of LanCL1 Knockout Mice
Cited by: 6
Author(s): Fangxing Zhang, Nana Qi, Yanyu Zeng, Mengying Bao, Yang Chen, Jinling Liao, Luyun Wei, Dehao Cao, Shengzhu Huang, Qianqian Luo, Yonghua Jiang, Zengnan Mo
Software Mentions: 3
Published: over 5 years ago

10.1111/jcmm.16769

Axl‐inhibitor bemcentinib alleviates mitochondrial dysfunction in the unilateral ureter obstruction murine model
Cited by: 8
Author(s): August Hoel, Tarig Al-Hadi Osman, Fredrik Hoel, Hassan Osman Alhassan Elsaid, Tony Chen, Lea Landolt, Janka Bábíčková, Karl Johan Tronstad, James B. Lorens, Gro Gausdal, Hanspeter Marti, Jessica Furriol
Software Mentions: 3
Published: almost 5 years ago

10.18632/oncotarget.25754

Viral DNA integration and methylation of human papillomavirus type 16 in high-grade oral epithelial dysplasia and head and neck squamous cell carcinoma
Cited by: 12
Author(s): Sujita Khanal, Brian S. Shumway, Maryam Zahin, Rebecca Redman, John Strickley, Patrick J. Trainor, N. Shesh, Shin-je Ghim, A. Bennett Jenson, Joongho Joh
Software Mentions: 3
Published: almost 8 years ago

10.18632/oncotarget.25572

Transcriptome profiling of anti-müllerian hormone treated preantral/small antral mouse ovary follicles
Cited by: 2
Author(s): Zia Ur Rehman, Faheem Ahmed Khan, Farmanullah, Hira Sajjad Talpur, Qing Liu, Shenhe Liu, Liguo Yang
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-019-41882-y

Enrichment of periodontal pathogens from the biofilms of healthy adults
Cited by: 51
Author(s): Monika Naginyte, Thuy Do, Josephine L. Meade, Deirdre DeVine, Philip Marsh
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-019-41680-6

Novel diversity within marine Mamiellophyceae (Chlorophyta) unveiled by metabarcoding
Cited by: 39
Author(s): Margot Tragin, Daniel Vaulot
Software Mentions: 3
Published: about 7 years ago

10.3390/cancers11030309

Compositional and Functional Differences between Microbiota and Cervical Carcinogenesis as Identified by Shotgun Metagenomic Sequencing
Cited by: 35
Author(s): Minji Kwon, Seung‐Woo Seo, Mi Kyung Kim, Dong Ock Lee, Myoung Cheol Lim
Software Mentions: 3
Published: over 7 years ago

10.1242/jcs.247957

BCAT1 affects mitochondrial metabolism independently of leucine transamination in activated human macrophages
Cited by: 25
Author(s): Jeong‐Hun Ko, Antoni Olona, Adonia E. Papathanassiu, Norzawani Buang, Kwon-Sik Park, Ana S.H. Costa, Claudio Mauro, Christian Frezza, Jacques Behmoaras
Software Mentions: 3
Published: over 6 years ago

10.3389/fphys.2021.621830

Identification of the Crucial Gene in Overflow Arteriovenous Fistula by Bioinformatics Analysis
Cited by: 3
Author(s): Zhengde Zhao, Qining Fu, Liangzhu Hu, Yangdong Liu
Software Mentions: 3
Published: almost 5 years ago

10.1098/rstb.2020.0038

Juvenile Dungeness crabs (Metacarcinus magister) selectively integrate and modify the fatty acids of their experimental diets
Cited by: 6
Author(s): Michael Thomas, Julie B. Schram, Zade F Clark-Henry, Bree K. Yednock, Alan L. Shanks, Aaron W. E. Galloway
Software Mentions: 3
Published: about 6 years ago

10.14814/phy2.13534

Human hair follicle transcriptome profiling: a minimally invasive tool to assess molecular adaptations upon low‐volume, high‐intensity interval training
Cited by: 7
Author(s): Jing Zhang, Sarah J. Wallace, Maria Y. Shiu, Ingrid Smith, Shawn G. Rhind, Valérie S. Langlois
Software Mentions: 3
Published: over 8 years ago

10.1098/rsos.170033

Microbe biogeography tracks water masses in a dynamic oceanic frontal system
Cited by: 26
Author(s): Anni Djurhuus, Philipp H. Boersch‐Supan, Svein‐Ole Mikalsen, Alex D. Rogers
Software Mentions: 3
Published: over 9 years ago

10.14814/phy2.14523

Age‐ and duration‐dependent effects of whey protein on high‐fat diet‐induced changes in body weight, lipid metabolism, and gut microbiota in mice
Cited by: 17
Author(s): Serena Boscaini, Raúl Cabrera‐Rubio, Oleksandr Nychyk, John R. Speakman, John F. Cryan, Paul D. Cotter, Kanishka N. Nilaweera
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-019-40974-z

G-protein Gα13 functions as a cytoskeletal and mitochondrial regulator to restrain osteoclast function
Cited by: 11
Author(s): Shinichi Nakano, Kenzo Inoue, Cheng Xu, Zhonghao Deng, Viktoriya Syrovatkina, G. Vitone, Liang Zhao, Xin‐Yun Huang, Baohong Zhao
Software Mentions: 3
Published: over 7 years ago

10.3390/md18050237

Monogalactosyldiacylglycerol and Sulfolipid Synthesis in Microalgae
Cited by: 26
Author(s): Gennaro Riccio, Danièle De Luca, Chiara Lauritano
Software Mentions: 3
Published: about 6 years ago

10.1098/rsos.170296

Transcriptional response to West Nile virus infection in the zebra finch ( Taeniopygia guttata )
Cited by: 17
Author(s): Daniel J. Newhouse, Erik K. Hofmeister, Christopher N. Balakrishnan
Software Mentions: 3
Published: about 9 years ago

10.1038/s41598-019-40564-z

Decline of transmissible gastroenteritis virus and its complex evolutionary relationship with porcine respiratory coronavirus in the United States
Cited by: 38
Author(s): Fangzhou Chen, Todd P. Knutson, Stephanie Rossow, Linda J. Saif, Douglas Marthaler
Software Mentions: 3
Published: over 7 years ago

10.1098/rsos.170568

Detection of an endangered aquatic heteropteran using environmental DNA in a wetland ecosystem
Cited by: 51
Author(s): Hideyuki Doi, Yusuke Sakata, Rio Souma, Toshihiro Kosuge, Mariko Nagano, Kazuko Ikeda, Koki Yano, Koji Tojo
Software Mentions: 3
Published: almost 9 years ago

10.3389/fphys.2019.01635

Fermented Animal Source Protein as Substitution of Fishmeal on Intestinal Microbiota, Immune-Related Cytokines and Resistance to Vibrio mimicus in Freshwater Crayfish (Cherax cainii)
Cited by: 20
Author(s): Muhammad A.B. Siddik, Ravi Fotedar, Reaz Chaklader, Javed Foysal, Ashfaqun Nahar, Janet Howieson
Software Mentions: 3
Published: over 6 years ago

10.1007/s10530-016-1199-x

The compensatory potential of increased immigration following intensive American mink population control is diluted by male-biased dispersal
Cited by: 26
Author(s): Matthew K. Oliver, Stuart B. Piertney, Andrzej Zalewski, Yolanda Melero, Xavier Lambin
Software Mentions: 3
Published: almost 10 years ago

10.3389/fphys.2020.608279

Protecting Intestinal Microenvironment Alleviates Acute Graft-Versus-Host Disease
Cited by: 5
Author(s): Zhengcan Zhou, Tao Shang, Xiurong Li, Hongyan Zhu, Yubo Qi, Xin Zhao, Xi Chen, Shi Z, Guixiang Pan, Yuefei Wang, Guanwei Fan, Xiumei Gao, Yan Zhu, Yi Feng
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0248263

Informed consent rates for neonatal randomized controlled trials in low- and lower middle-income versus high-income countries: A systematic review
Cited by: 6
Author(s): Jacqueline Patterson, Stuti Pant, Denise F. Jones, Syed Taha, Michael Jones, Melissa Bauserman, Paolo Montaldo, Carl Bose, Sudhin Thayyil
Software Mentions: 3
Published: over 5 years ago

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