cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/toxins11070431

Association of Nrf2, SOD2 and GPX1 Polymorphisms with Biomarkers of Oxidative Distress and Survival in End-Stage Renal Disease Patients
Cited by: 22
Author(s): Djurdja Jerotić, Marija Matić, Sonja Šuvakov, Katarina Vučićević, Tatjana Damjanović, Ana Savić-Radojević, Marija Plješa-Ercegovac, Vesna Ćorić, Aleksandra Stefanović, Jasmina Ivanišević, Zorana Jelić‐Ivanović, Lana McClements, Nada Dimković, Tatjana Simić
Software Mentions: 3
Published: about 7 years ago

10.3390/ijms22189799

Identification of miR-199a-5p, miR-214-3p and miR-99b-5p as Fibrosis-Specific Extracellular Biomarkers and Promoters of HSC Activation
Cited by: 7
Author(s): Catherine Jane Messner, Saskia Schmidt, Dilek Özkul, Carine Gaiser, Luigi Terracciano, Stephan Krähenbühl, Laura Suter‐Dick
Software Mentions: 3
Published: almost 5 years ago

10.3390/toxics8040087

Systematic Assessment of Exposure Variations on Observed Bioactivity in Zebrafish Chemical Screening
Cited by: 9
Author(s): Lindsay Wilson, Lisa Truong, Michael T. Simonich, Robert L. Tanguay
Software Mentions: 3
Published: almost 6 years ago

10.3390/microorganisms9030465

Unraveling the Gut Microbiome of the Invasive Small Indian Mongoose (Urva auropunctata) in the Caribbean
Cited by: 6
Author(s): Anne A.M.J. Becker, KC Hill, Patrick Butaye
Software Mentions: 3
Published: over 5 years ago

10.3390/insects11050301

Prevalence of Flavescence Dorée Phytoplasma-Infected Scaphoideus titanus in Different Vineyard Agroecosystems of Northwestern Italy
Cited by: 15
Author(s): Matteo Ripamonti, Mattia Pegoraro, Marika Rossi, Nicola Bodino, Dylan Beal, Loretta Panero, Cristina Marzachı̀, Domenico Bosco
Software Mentions: 3
Published: over 6 years ago

10.7554/eLife.38621

CD95/Fas ligand mRNA is toxic to cells
Cited by: 32
Author(s): William Putzbach, Ashley Haluck-Kangas, Quan Gao, Aishe A. Sarshad, Elizabeth T. Bartom, Austin Stults, Abdul Qadir, Markus Hafner, Marcus E. Peter
Software Mentions: 3
Published: almost 8 years ago

10.12688/f1000research.13996.2

Birds of primary and secondary forest and shrub habitats in the peat swamp of Berbak National Park, Sumatra
Cited by: 4
Author(s): Kevin Darras, Dedi Rahman, Waluyo Sugito, Yeni Mulyani, Dewi M. Prawiradilaga, Agus Rozali, Irfan Fitriawan, Teja Tscharntke
Software Mentions: 3
Published: over 8 years ago

10.7150/thno.50051

Adenylosuccinate lyase is oncogenic in colorectal cancer by causing mitochondrial dysfunction and independent activation of NRF2 and mTOR-MYC-axis
Cited by: 17
Author(s): Stephanie Taha‐Mehlitz, Gaia Bianco, Mairene Coto‐Llerena, Venkatesh Kancherla, Glenn R. Bantug, John Gallon, Caner Ercan, Federica Panebianco, Serenella Eppenberger‐Castori, M. Strauß, Sebastian M. Staubli, Martin Bolli, Ralph Peterli, Matthias S. Matter, Luigi Terracciano, Markus von Flüe, Charlotte K.Y. Ng, Savas D. Soysal, Otto Kollmar, Salvatore Piscuoglio
Software Mentions: 3
Published: over 5 years ago

10.3390/pathogens10030376

Host-Feeding Preference and Diel Activity of Mosquito Vectors of the Japanese Encephalitis Virus in Rural Cambodia
Cited by: 19
Author(s): Sébastien Boyer, Benoı̂t Durand, Sony Yean, Cécile Brengues, Pierre‐Olivier Maquart, Didier Fontenille, Véronique Chevalier
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2021.690091

Gut and Vagina Microbiota Associated With Estrus Return of Weaning Sows and Its Correlation With the Changes in Serum Metabolites
Cited by: 5
Author(s): Jia Zhong, Min Liu, Shanlin Ke, Xiaowan Huang, Shouguo Fang, Maozhang He, Hao Fu, Congying Chen, Lusheng Huang
Software Mentions: 3
Published: about 5 years ago

10.1098/rsos.150519

Fractal measures of spatial pattern as a heuristic for return rate in vegetative systems
Cited by: 11
Author(s): Michael A. Irvine, Emma L. Jackson, Emma J. Kenyon, Kevan J. Cook, Matthew James Keeling, James C. Bull
Software Mentions: 3
Published: over 10 years ago

10.7150/thno.47001

LAMA4 upregulation is associated with high liver metastasis potential and poor survival outcome of Pancreatic Cancer
Cited by: 16
Author(s): Biao Zheng, Jianhua Qu, Kenoki Ohuchida, Haimin Feng, Siew Meng Chong, Zilong Yan, Yicui Piao, Peng Liu, Nan Sheng, Daiki Eguchi, Takao Ohtsuka, Kazuhiro Mizumoto, Zhong Liu, Shazib Pervaiz, Peng Gong, Masafumi Nakamura
Software Mentions: 3
Published: over 6 years ago

10.3389/fneur.2021.633068

The Cologne Picture Naming Test for Language Mapping and Monitoring (CoNaT): An Open Set of 100 Black and White Object Drawings
Cited by: 2
Author(s): Carolin Weiß Lucas, J. Pieczewski, Sophia Kochs, Charlotte Nettekoven, Christian Grefkes, Roland Goldbrunner, Kristina Jonas
Software Mentions: 3
Published: over 5 years ago

10.3390/pathogens9020131

Metabolic Changes of Mycobacterium tuberculosis during the Anti-Tuberculosis Therapy
Cited by: 9
Author(s): Julia Bespyatykh, Egor Shitikov, Dmitry Bespiatykh, Andrei Guliaev, Ksenia M. Klimina, Vladimir A. Veselovsky, Georgij Arapidi, Marine Dogonadze, Viacheslav Zhuravlev, Elena Ilina, Vadim M. Govorun
Software Mentions: 3
Published: over 6 years ago

10.1534/g3.120.401153

Genome-Wide Association Study Reveals Novel Candidate Genes Associated with Productivity and Disease Resistance to Moniliophthora spp. in Cacao (Theobroma cacao L.)
Cited by: 20
Author(s): Jaime A. Osorio-Guarín, Jhon A. Berdugo-Cely, Roberto A. Coronado-Silva, Eliana Baez, Yeirme Jaimes, Roxana Yockteng
Software Mentions: 3
Published: over 6 years ago

10.3389/fneur.2020.00879

Ocular Vestibular-Evoked Myogenic Potential Amplitudes Elicited at 4 kHz Optimize Detection of Superior Semicircular Canal Dehiscence
Cited by: 9
Author(s): Emma Tran, Austin Swanson, Jeffrey D. Sharon, Yona Vaisbuch, Nikolas H. Blevins, Matthew B. Fitzgerald, Kristen Steenerson
Software Mentions: 3
Published: almost 6 years ago

10.1111/eva.13086

Population genomic data in spider mites point to a role for local adaptation in shaping range shifts
Cited by: 11
Author(s): Lei Chen, Jing‐Tao Sun, Peng‐Yu Jin, Ary A. Hoffmann, Xiao‐Li Bing, Dian‐Shu Zhao, Xiao‐Feng Xue, Xiao‐Yue Hong
Software Mentions: 3
Published: almost 6 years ago

10.1186/s40168-017-0316-0

Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project
Cited by: 54
Author(s): Menghan Liu, Hyunwook Koh, Zachary Kurtz, Thomas Battaglia, Amanda PeBenito, LI Hui-lin, Lama Nazzal, Martin J. Blaser
Software Mentions: 3
Published: almost 9 years ago

10.3390/microorganisms8060911

A Municipality-Based Approach Using Commuting Census Data to Characterize the Vulnerability to Influenza-Like Epidemic: The COVID-19 Application in Italy
Cited by: 9
Author(s): Lara Savini, Luca Candeloro, Paolo Calistri, Annamaria Conte
Software Mentions: 3
Published: about 6 years ago

10.7554/eLife.43476

The mother’s risk of premature death after child loss across two centuries
Cited by: 7
Author(s): Unnur Valdimarsdóttir, Donghao Lü, Sigrún H. Lund, Katja Fall, Fang Fang, Þórður Kristjánsson, Daníel F. Guðbjartsson, Agnar Helgason, Kári Stefánsson
Software Mentions: 3
Published: almost 7 years ago

10.1101/2020.12.11.421057

Oligonucleotide Capture Sequencing of the SARS-CoV-2 Genome and Subgenomic Fragments from COVID-19 Individuals
Cited by: 8
Author(s): Harshavardhan Doddapaneni, Sara Javornik Cregeen, Richard Sucgang, Qingchang Meng, Xiang Qin, Vasanthi Avadhanula, Hsu Chao, Vipin Menon, Erin Nicholson, David Henke, Felipe-Andrés Piedra, Anubama Rajan, Zeineen Momin, Kavya Kottapalli, Kristi L. Hoffman, Fritz J. Sedlazeck, Ginger Metcalf, Pedro A. Piedra, Donna M. Muzny, Joseph F. Petrosino, Richard A. Gibbs
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0165758

Exotic-Dominated Grasslands Show Signs of Recovery with Cattle Grazing and Fire
Cited by: 10
Author(s): John Thomas Delaney, Raymond A. Moranz, Diane M. Debinski, David M. Engle, James R. Miller
Software Mentions: 3
Published: almost 10 years ago

10.1007/s00122-021-03805-2

Population genomics of Mediterranean oat (A. sativa) reveals high genetic diversity and three loci for heading date
Cited by: 8
Author(s): Francisco José Canales, Gracia Montilla-Bascón, Wubishet A. Bekele, Catherine Howarth, Tim Langdon, Nicolás Rispail, Nicholas A. Tinker, Elena Prats
Software Mentions: 3
Published: over 5 years ago

10.3390/insects11060340

Detection of Wolbachia Infections in Natural and Laboratory Populations of the Moroccan Hessian Fly, Mayetiola destructor (Say)
Cited by: 4
Author(s): Naima Bel Mokhtar, Amal Maurady, Mohammed Réda Britel, Mustapha El Bouhssini, Costas Batargias, Panagiota Stathopoulou, Elias Asimakis, George Tsiamis
Software Mentions: 3
Published: about 6 years ago

10.1038/s41598-021-89267-4

Mitigating belief projection in explainable artificial intelligence via Bayesian teaching
Cited by: 26
Author(s): Scott Cheng‐Hsin Yang, Wai Keen Vong, Ravi B. Sojitra, Tomas Folke, Patrick Shafto
Software Mentions: 3
Published: over 5 years ago

10.1534/g3.120.401327

Reconstruction of the Largest Pedigree Network for Pear Cultivars and Evaluation of the Genetic Diversity of the USDA-ARS NationalPyrusCollection
Cited by: 16
Author(s): Sara Montanari, Joseph D. Postman, Nahla V. Bassil, David B. Neale
Software Mentions: 3
Published: almost 6 years ago

10.1534/g3.120.401516

Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
Cited by: 20
Author(s): Javier F. Tabima, Ian A. Trautman, Ying Chang, Yan Wang, Stephen J. Mondo, Alan Kuo, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Software Mentions: 3
Published: almost 6 years ago

10.1128/mBio.00301-18

TgTKL1 Is a Unique Plant-Like Nuclear Kinase That Plays an Essential Role in Acute Toxoplasmosis
Cited by: 15
Author(s): Joseph M. Varberg, Isabelle Coppens, Gustavo Arrizabalaga, Rajshekhar Y. Gaji
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0205883

Single-cell RNA sequencing of the mammalian pineal gland identifies two pinealocyte subtypes and cell type-specific daily patterns of gene expression
Cited by: 33
Author(s): Joseph C. Mays, Michael C. Kelly, Steven L. Coon, Lynne A. Holtzclaw, Martin F. Rath, Matthew W. Kelley, David C. Klein
Software Mentions: 3
Published: almost 8 years ago

10.1186/s13071-017-2075-y

Serological evidence of exposure to Rickettsia felis and Rickettsia typhi in Australian veterinarians
Cited by: 21
Author(s): Yen Thon Teoh, Sze Fui Hii, Mark Stevenson, Stephen Graves, Robert Rees, John Stenos, Rebecca J. Traub
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-017-14487-6

New method for the identification of arbuscular mycorrhizal fungi by proteomic-based biotyping of spores using MALDI-TOF-MS
Cited by: 16
Author(s): Thomas Crossay, Cyril Antheaume, Dirk Redecker, Lucie Bon, Nicolas Chedri, Clément Richert, Linda Guentas, Yvon Cavaloc, Hamid Amir
Software Mentions: 3
Published: almost 9 years ago

10.3389/fimmu.2020.589380

T-Cell Hyperactivation and Paralysis in Severe COVID-19 Infection Revealed by Single-Cell Analysis
Cited by: 115
Author(s): Bahire Kalfaoglu, José Almeida‐Santos, Chanidapa Adele Tye, Yorifumi Satou, Masahiro Ono
Software Mentions: 3
Published: almost 6 years ago

10.3389/fneur.2020.573575

Differential Glial Activation in Early Epileptogenesis—Insights From Cell-Specific Analysis of DNA Methylation and Gene Expression in the Contralateral Hippocampus
Cited by: 4
Author(s): Toni Berger, Magnus Dehli Vigeland, Hanne Sagsveen Hjorthaug, Cecilie G. Nome, Erik Taubøll, Kaja Kristine Selmer, Kjell Heuser
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-021-89175-7

Concurrent X chromosome inactivation and upregulation during non-human primate preimplantation development revealed by single-cell RNA-sequencing
Cited by: 2
Author(s): Ana Luíza Cidral, Joana Carvalho Moreira de Mello, Joost Gribnau, Lygia V. Pereira
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2020.595877

Gene Networks Underlying the Resistance of Bifidobacterium longum to Inflammatory Factors
Cited by: 5
Author(s): Vladimir A. Veselovsky, Marina S. Dyachkova, Egor Menyailo, Polina S. Polyaeva, Evgenii I. Olekhnovich, Egor Shitikov, Dmitry Bespiatykh, Tatiana A. Semashko, Artem S. Kasianov, Elena N. Ilina, В Н Даниленко, Ksenia M. Klimina
Software Mentions: 3
Published: almost 6 years ago

10.3390/microorganisms9050933

The Population Structure of Borrelia lusitaniae Is Reflected by a Population Division of Its Ixodes Vector
Cited by: 11
Author(s): Ana Cláudia Norte, Pierre Boyer, Santiago Castillo-Ramírez, Michal Chvostáč, Mohand O Brahami, Robert E. Rollins, Tom Woudenberg, Yuliya M. Didyk, Markéta Derdáková, Maria Sofia Núncio, Isabel Lopes de Carvalho, Gabriele Margos, Volker Fingerle
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009175

Escalation in the host-pathogen arms race: A host resistance response corresponds to a heightened bacterial virulence response
Cited by: 5
Author(s): Qi Wang, Nadia Shakoor, Adam Boyher, Kira M. Veley, Jeffrey C. Berry, Todd C. Mockler, Rebecca Bart
Software Mentions: 3
Published: over 5 years ago

10.1002/yea.3427

Aneuploidy in yeast: Segregation error or adaptation mechanism?
Cited by: 59
Author(s): Ciaran Gilchrist, Rike Stelkens
Software Mentions: 3
Published: about 7 years ago

10.3390/microorganisms9061200

Effects of Dispersants and Biosurfactants on Crude-Oil Biodegradation and Bacterial Community Succession
Cited by: 14
Author(s): Gareth E. Thomas, Jan L. Brant, Pablo Campo, Dave R. Clark, Frédéric Coulon, Benjamin H. Gregson, Terry J. McGenity, Boyd A. McKew
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0237618

Transcriptome analysis in rhesus macaques infected with hepatitis E virus genotype 1/3 infections and genotype 1 re-infection
Cited by: 2
Author(s): You-kyung Choi, Xiugen Zhang, Ganesh Srinivasamoorthy, Michael A. Purdy
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0247060

Angiotensin-converting enzyme 2 (ACE2) expression increases with age in patients requiring mechanical ventilation
Cited by: 66
Author(s): Sam W. Baker, Shirley Kwok, Gerald J. Berry, Thomas J. Montine
Software Mentions: 3
Published: over 5 years ago

10.3390/microorganisms7110551

Meta-16S rRNA Gene Phylogenetic Reconstruction Reveals the Astonishing Diversity of Cosmopolitan Myxobacteria
Cited by: 10
Author(s): Yang Liu, Qing Yao, Honghui Zhu
Software Mentions: 3
Published: almost 7 years ago

10.7717/peerj.8333

Risk-sensitive foraging does not explain condition-dependent choices in settling reef fish larvae
Cited by: 0
Author(s): Emma E Bogdan, Andrea L Dingeldein, Deirdre Bertrand, Will White
Software Mentions: 3
Published: over 6 years ago

10.1111/eva.12658

Structural and compositional mismatch between captive and wild Atlantic salmon (Salmo salar) parrs’ gut microbiota highlights the relevance of integrating molecular ecology for management and conservation methods
Cited by: 30
Author(s): Camille Lavoie, Maxime Courcelle, Baptise Redivo, Nicolas Derôme
Software Mentions: 3
Published: about 8 years ago

10.1098/rspb.2021.0121

Dietary plasticity of North American herbivores: a synthesis of stable isotope data over the past 7 million years
Cited by: 5
Author(s): Melissa I. Pardi, Larisa R.G. DeSantis
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-017-16633-6

A meta-proteomics approach to study the interspecies interactions affecting microbial biofilm development in a model community
Cited by: 45
Author(s): Jakob Herschend, Zacharias Brimnes Visby Damholt, Andrea Marion Marquard, Birte Svensson, Søren J. Sørensen, Per Hägglund, Mette Burmølle
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-021-88948-4

Genetic network and gene set enrichment analyses identify MND1 as potential diagnostic and therapeutic target gene for lung adenocarcinoma
Cited by: 4
Author(s): Jinying Wei, Guangping Meng, Jing Wu, Qiang Zhang, Jie Zhang
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2017.02699

Preliminary Comparison of Oral and Intestinal Human Microbiota in Patients with Colorectal Cancer: A Pilot Study
Cited by: 78
Author(s): Edda Russo, Giovanni Bacci, Carolina Chiellini, Camilla Fagorzi, Elena Niccolai, Antonio Taddei, Francesca Ricci, Maria Novella Ringressi, Rossella Borrelli, Filippo Melli, Manouela Miloeva, Paolo Bechi, Alessio Mengoni, Renato Fani, Amedeo Amedei
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-017-17127-1

A PLAG1 mutation contributed to stature recovery in modern cattle
Cited by: 38
Author(s): Yuri Tani Utsunomiya, Marco Milanesi, Adam Taiti Harth Utsunomiya, Rafaela Beatriz Pintor Torrecilha, Eui-Soo Kim, M. S. Costa, Tamíris Sayuri Aguiar, Steven G. Schroeder, Adriana Santana do Carmo, Roberto Carvalheiro, Haroldo Henrique Rezende Neves, Romulo Cláudio Morozini Padula, Thayla Souza Sussai, Ludmilla Balbo Zavarez, Rafael Silva Cipriano, Maria Margareth Theodoro Caminhas, George Hambrecht, Licia Colli, Elisa Eufemi, Paolo Ajmone‐Marsan, Deneb Cesana, Marco Sannazaro, Maurizio Buora, Michèle Morgante, George E. Liu, Derek M. Bickhart, Curtis P. Van Tassell, Johann Sölkner, Tad S. Sonstegard, José Fernando Garcia
Software Mentions: 3
Published: over 8 years ago

10.3897/zookeys.560.6264

Taxonomic revision of the tarantula genus Aphonopelma Pocock, 1901 (Araneae, Mygalomorphae, Theraphosidae) within the United States
Cited by: 53
Author(s): Chris A. Hamilton, Brent E. Hendrixson, Jason E. Bond
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0242773

Coupling of autism genes to tissue-wide expression and dysfunction of synapse, calcium signalling and transcriptional regulation
Cited by: 13
Author(s): Jamie Reilly, Louise Gallagher, Geraldine Leader, Sanbing Shen
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-017-17730-2

Constitutively elevated levels of SOCS1 suppress innate responses in DF-1 immortalised chicken fibroblast cells
Cited by: 28
Author(s): Efstathios S. Giotis, CS Ross, RC Robey, Axel Nohturfft, Stephen Goodbourn, Michael A. Skinner
Software Mentions: 3
Published: over 8 years ago

10.1093/g3journal/jkab024

Integration of high-density genetic mapping with transcriptome analysis uncovers numerous agronomic QTL and reveals candidate genes for the control of tillering in sorghum
Cited by: 3
Author(s): Rajanikanth Govindarajulu, Ashley N Hostetler, Yuguo Xiao, Srinivasa R. Chaluvadi, Margarita Mauro-Herrera, Muriel L. Siddoway, Clinton Whipple, Jeffrey L. Bennetzen, Katrien M. Devos, Andrew N. Doust, Jennifer Hawkins
Software Mentions: 3
Published: over 5 years ago

10.3897/zookeys.999.58747

New species of the genera Bracon Fabricius and Syntomernus Enderlein (Hymenoptera, Braconidae, Braconinae) from South Korea
Cited by: 3
Author(s): Konstantin G. Samartsev, Deok-Seo Ku
Software Mentions: 3
Published: over 5 years ago

10.3390/pathogens8010032

Characteristics of Listeria Monocytogenes Strains Persisting in a Meat Processing Facility over a 4-Year Period
Cited by: 50
Author(s): Andrea Stoller, Marc J. A. Stevens, Roger Stephan, Claudia Guldimann
Software Mentions: 3
Published: over 7 years ago

10.1098/rspb.2017.2116

Deep pelagic food web structure as revealed by in situ feeding observations
Cited by: 74
Author(s): C. Anela Choy, Steven H. D. Haddock, Bruce H. Robison
Software Mentions: 3
Published: over 8 years ago

10.3390/plants10040798

Genome-Wide Association Study of Local Thai Indica Rice Seedlings Exposed to Excessive Iron
Cited by: 2
Author(s): Reunreudee Kaewcheenchai, Phanchita Vejchasarn, Kousuke Hanada, Kazumasa Shirai, Chatchawan Jantasuriyarat, Piyada Juntawong
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-017-18656-5

Phenology Information Contributes to Reduce Temporal Basis Risk in Agricultural Weather Index Insurance
Cited by: 65
Author(s): Tobias Dalhaus, Oliver Mußhoff, Robert Finger
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-19269-2

Efficient isolation on Vero.DogSLAMtag cells and full genome characterization of Dolphin Morbillivirus (DMV) by next generation sequencing
Cited by: 10
Author(s): Simone Peletto, Claudio Caruso, Francesco Cerutti, Paola Modesto, Cristina Biolatti, Alessandra Pautasso, Carla Grattarola, Federica Giorda, Sandro Mazzariol, Walter Mignone, Loretta Masoero, Cristina Casalone, Pier Luigi Acutis
Software Mentions: 3
Published: over 8 years ago

10.3389/fimmu.2016.00361

Tissue-Specific Expression Patterns of MicroRNA during Acute Graft-versus-Host Disease in the Rat
Cited by: 20
Author(s): Dasaradha Jalapothu, Margherita Boieri, Rachel E Crossland, Pranali Shah, Isha A. Butt, Jean Norden, Ralf Dressel, AM Dickinson, Marit Inngjerdingen
Software Mentions: 3
Published: almost 10 years ago

10.1371/journal.pone.0131451

New Metrics for Evaluating Viral Respiratory Pathogenesis
Cited by: 55
Author(s): Vineet D. Menachery, Lisa E. Gralinski, Ralph S. Baric, Martin T. Ferris
Software Mentions: 3
Published: about 11 years ago

10.3389/fnmol.2021.701977

Expression Analysis of Ermin and Listerin E3 Ubiquitin Protein Ligase 1 Genes in Autistic Patients
Cited by: 5
Author(s): Shadi Shiva, Jalal Gharesouran, Hani Sabaie, Mohammad Reza Asadi, Shahram Arsang‐Jang, Mohammad Taheri, Maryam Rezazadeh
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-017-18575-5

Experimental infection of cattle with Mycobacterium tuberculosis isolates shows the attenuation of the human tubercle bacillus for cattle
Cited by: 45
Author(s): Bernardo Villarreal‐Ramos, Stefan Berg, Adam O. Whelan, Sébastien Holbert, Florence Carreras, Francisco J. Salguero, Bhagwati Khatri, Kerri M. Malone, Kévin Rue-Albrecht, Ronan G. Shaughnessy, Alicia Smyth, Gobena Ameni, Abraham Aseffa, Pierre Sarradin, Nathalie Winter, Martin Vordermeier, Stephen V. Gordon
Software Mentions: 3
Published: over 8 years ago

10.3389/fneur.2018.00468

Diffusion Tensor Imaging (DTI) Correlates of Self-Reported Sleep Quality and Depression Following Mild Traumatic Brain Injury
Cited by: 29
Author(s): Adam C. Raikes, Sahil Bajaj, Natalie S. Dailey, Ryan Smith, Anna Alkozei, Brieann C. Satterfield, William D.S. Killgore
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.pone.0202407

Repeated cyclone events reveal potential causes of sociality in coral-dwelling Gobiodon fishes
Cited by: 10
Author(s): Martin L. Hing, O. Selma Klanten, Mark Dowton, Kylie R. Brown, Marian Y. L. Wong
Software Mentions: 3
Published: almost 8 years ago

10.2196/jmir.7457

What Matters in Weight Loss? An In-Depth Analysis of Self-Monitoring
Cited by: 63
Author(s): Stefanie Painter, Rezwan Ahmed, James O. Hill, Robert F. Kushner, R R Lindquist, Scott Brunning, Amy Margulies
Software Mentions: 3
Published: over 9 years ago

10.7554/eLife.62766

Developmental, cellular, and behavioral phenotypes in a mouse model of congenital hypoplasia of the dentate gyrus
Cited by: 1
Author(s): Amir Rattner, Chantelle E. Terrillion, Claudia Jou, Tina Kleven, Shun Felix Hu, John Williams, Zhipeng Hou, Manisha Aggarwal, Susumu Mori, Gloria Shin, Loyal A. Goff, Menno P. Witter, Mikhail V. Pletnikov, A. G. Fenton, Jeremy Nathans
Software Mentions: 3
Published: almost 6 years ago

10.7554/eLife.58097

The manifold actions of signaling peptides on subcellular dynamics of a receptor specify stomatal cell fate
Cited by: 13
Author(s): Xiaowen Qi, Akira Yoshinari, Pengfei Bai, Michal Maes, Scott M Zeng, Keiko U. Torii
Software Mentions: 3
Published: about 6 years ago

10.3390/microorganisms8091440

Central Asian Rodents as Model Animals for Leishmania major and Leishmania donovani Research
Cited by: 8
Author(s): Barbora Vojtková, Tatiana Spitzová, Jan Votýpka, Tereza Leštinová, Iveta Kominkova, Michaela Hájková, David Santos-Mateus, Michael A. Miles, Petr Volf, Jovana Sádlová
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-018-20369-2

Effects of the floral phytochemical eugenol on parasite evolution and bumble bee infection and preference
Cited by: 15
Author(s): Evan C. Palmer‐Young, Austin C. Calhoun, A. G. Mirzayeva, Benn M. Sadd
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0245841

Validation of the Preoperative Score to Predict Postoperative Mortality (POSPOM) in Germany
Cited by: 5
Author(s): Yannik C. Layer, Jan Menzenbach, Yonah L. Layer, Andreas Mayr, Tobias Hilbert, Markus Velten, Andreas Hoeft, Maria Wittmann
Software Mentions: 3
Published: over 5 years ago

10.12688/gatesopenres.13029.2

Identifying population segments for effective intervention design and targeting using unsupervised machine learning: an end-to-end guide
Cited by: 12
Author(s): Elisabeth Engl, Peter Smittenaar, Sema K. Sgaier
Software Mentions: 3
Published: almost 7 years ago

10.3389/fimmu.2019.02894

SampPick: Selection of a Cohort of Subjects Matching a Population HLA Distribution
Cited by: 6
Author(s): Joseph R. McGill, Osman N. Yogurtcu, Daniela Verthelyi, Hong Yang, Zuben E. Sauna
Software Mentions: 3
Published: over 6 years ago

10.1155/2021/9991255

Identification of 5 Hub Genes Related to the Early Diagnosis, Tumour Stage, and Poor Outcomes of Hepatitis B Virus-Related Hepatocellular Carcinoma by Bioinformatics Analysis
Cited by: 13
Author(s): Rui Qiang, Zitong Zhao, Lu Tang, Qian Wang, Yanhong Wang, Qian Huang
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-018-20593-w

Genetic relatedness reveals total population size of white sharks in eastern Australia and New Zealand
Cited by: 85
Author(s): Richard Hillary, Mark V. Bravington, Toby A. Patterson, Peter M. Grewe, R. Bradford, Pierre Feutry, Rasanthi M. Gunasekera, Victor M. Peddemors, Jonathan M. Werry, Malcolm P. Francis, Clinton Duffy, Barry D. Bruce
Software Mentions: 3
Published: over 8 years ago

10.3389/fnhum.2018.00383

Out of the Loop, in Your Bubble: Mind Wandering Is Independent From Automation Reliability, but Influences Task Engagement
Cited by: 8
Author(s): Jonas Gouraud, Arnaud Delorme, Bruno Berberian
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-20783-6

The impact of reconstructed soils following oil sands exploitation on aspen and its associated belowground microbiome
Cited by: 12
Author(s): Franck Stefani, Nathalie Isabel, Marie-Josée Morency, Manuel Lamothe, Simon Nadeau, Denis Lachance, Edith H.Y. Li, Charles W. Greer, Étienne Yergeau, Bradley D. Pinno, Armand Séguin
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-21440-8

Biogeographical Differences in the Influence of Maternal Microbial Sources on the Early Successional Development of the Bovine Neonatal Gastrointestinal tract
Cited by: 103
Author(s): Carl J. Yeoman, Suzanne L. Ishaq, Elena Bichi, Sarah K. Olivo, James Lowe, Brian Aldridge
Software Mentions: 3
Published: over 8 years ago

10.3390/microorganisms7090282

Differential Impact of Subtherapeutic Antibiotics and Ionophores on Intestinal Microbiota of Broilers
Cited by: 31
Author(s): Kelsy Robinson, Sage Becker, Yingping Xiao, Wentao Lyu, Qing Yang, Huiling Zhu, Hua Yang, Jiangchao Zhao, Guolong Zhang
Software Mentions: 3
Published: about 7 years ago

10.3389/fneur.2019.01252

Neurodegenerative Disease–Associated Variants in TREM2 Destabilize the Apical Ligand-Binding Region of the Immunoglobulin Domain
Cited by: 19
Author(s): Hunter B. Dean, Erik D. Roberson, Yuhua Song
Software Mentions: 3
Published: over 6 years ago

10.3389/fnins.2021.653130

Genetic Overlap Between Alzheimer’s Disease and Depression Mapped Onto the Brain
Cited by: 12
Author(s): Jennifer Monereo Sánchez, Miranda T. Schram, Oleksandr Frei, Kevin O’Connell, Alexey Shadrin, Olav B. Smeland, Lars T. Westlye, Ole A. Andreassen, Tobias Kaufmann, David Linden, Dennis van der Meer
Software Mentions: 3
Published: about 5 years ago

10.3390/plants9050592

From Genome to Field—Observation of the Multimodal Nematicidal and Plant Growth-Promoting Effects of Bacillus firmus I-1582 on Tomatoes Using Hyperspectral Remote Sensing
Cited by: 16
Author(s): Nik Susič, Uroš Žibrat, Lovro Sinkovič, Andrej Vončina, Jaka Razinger, M. Knapič, Aleš Sedlar, Saša Širca, Barbara Gerič Stare
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-018-22288-8

Low incubation temperature during early development negatively affects survival and related innate immune processes in zebrafish larvae exposed to lipopolysaccharide
Cited by: 25
Author(s): Qirui Zhang, Martina Kopp, Igor Babiak, Jorge Manuel de Oliveira Fernandes
Software Mentions: 3
Published: over 8 years ago

10.3906/biy-2005-21

Signature changes in the expressions of protein-coding genes, lncRNAs, and repeat elements in early and late cellular senescence
Cited by: 4
Author(s): Gökhan Karakülah, Cihangir Yandım
Software Mentions: 3
Published: over 5 years ago

10.3390/plants10071291

A Transcriptional Analysis of the Genes Involved in the Ascorbic Acid Pathways Based on a Comparison of the Juice and Leaves of Navel and Anthocyanin-Rich Sweet Orange Varieties
Cited by: 7
Author(s): P. Caruso, Mario Russo, Marco Caruso, Mario Di Guardo, Giuseppe Russo, Simona Fabroni, Nicolina Timpanaro, Concetta Licciardello
Software Mentions: 3
Published: about 5 years ago

10.1155/2020/4574792

Functional Modular Network Identifies the Key Genes of Preoperative Inhalation Anesthesia and Intravenous Anesthesia in Off-Pump Coronary Artery Bypass Grafting
Cited by: 3
Author(s): Hongfei Zhao, Weitian Wang, Liping Liu, Junlong Wang, Quanzhang Yan
Software Mentions: 3
Published: about 6 years ago

10.2196/19137

Awareness Development and Usage of Mobile Health Technology Among Individuals With Hypertension in a Rural Community of Bangladesh: Randomized Controlled Trial
Cited by: 18
Author(s): Yasmin Jahan, Moshiur Rahman, A. S. G. Faruque, Mohammod Jobayer Chisti, Kana Kazawa, Ryota Matsuyama, Michiko Moriyama
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-021-87479-2

Soil CO2 emission and soil attributes associated with the microbiota of a sugarcane area in southern Brazil
Cited by: 3
Author(s): Mara Regina Moitinho, Daniel De Bortoli Teixeira, Elton da Silva Bicalho, Alan Rodrigo Panosso, Antônio Sérgio Ferraudo, Gener Tadeu Pereira, Siu Mui Tsai, Beatriz Maria Ferrari Borges, Newton La Scala
Software Mentions: 3
Published: over 5 years ago

10.1007/s00125-021-05490-8

Replication and cross-validation of type 2 diabetes subtypes based on clinical variables: an IMI-RHAPSODY study
Cited by: 36
Author(s): Roderick C. Slieker, Louise A. Donnelly, Hugo Fitipaldi, Gerard A Bouland, G Giordano, Mikael Åkerlund, Mathias J. Gerl, Emma Ahlqvist, Ashfaq Ali, Iulian Dragan, Andreas Festa, Michael K. Hansen, Dina Mansour Aly, Min Kim, Dmitry Kuznetsov, Florence Mehl, Christian Klose, Kai Simons, Imre Pávó, Timothy J. Pullen, Tommi Suvitaival, Asger Wretlind, Peter Rossing, Valeriya Lyssenko, Cristina Legido‐Quigley, Leif Groop, Bernard Thorens, Paul W. Franks, Mark Ibberson, Guy A. Rutter, Joline W.J. Beulens, Leen M. ‘t Hart, Ewan R. Pearson
Software Mentions: 3
Published: about 5 years ago

10.1084/jem.20180649

Loss of IL-10 signaling in macrophages limits bacterial killing driven by prostaglandin E2
Cited by: 41
Author(s): Subhankar Mukhopadhyay, Eva Heinz, Immacolata Porreca, Kaur Alasoo, Amy Yeung, Haiying Yang, Tobias Schwerd, Jessica L. Forbester, Christine Hale, Chukwuma A. Agu, Yoon Ha Choi, Julia Rodrigues, Melania Capitani, Luke Jostins-Dean, David Thomas, Simon Travis, Daniel J Gaffney, William C. Skarnes, Nicholas R. Thomson, Holm H. Uhlig, Gordon Dougan, Fiona Powrie
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-018-23901-6

A comparative analysis of rod bipolar cell transcriptomes identifies novel genes implicated in night vision
Cited by: 11
Author(s): Sasha M Woods, Edward Mountjoy, Duncan Muir, Sarah E. Ross, Denize Atan
Software Mentions: 3
Published: over 8 years ago

10.3390/insects12020127

Biocontrol of Melolontha spp. Grubs in Organic Strawberry Plantations by Entomopathogenic Fungi as Affected by Environmental and Metabolic Factors and the Interaction with Soil Microbial Biodiversity
Cited by: 8
Author(s): Małgorzata Tartanus, Ewa M. Furmanczyk, Loredana Canfora, Flavia Pinzari, C. Tkaczuk, A. Majchrowska-Safaryan, Eligio Malusà
Software Mentions: 3
Published: over 5 years ago

10.3390/genes9020104

Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models
Cited by: 69
Author(s): Aeriel D. Belk, Zhenjiang Zech Xu, David Carter, Aaron M. Lynne, Sibyl R. Bucheli, Rob Knight, Jessica L. Metcalf
Software Mentions: 3
Published: over 8 years ago

10.3389/fnins.2021.653120

Altered Gut Microbiota in a Fragile X Syndrome Mouse Model
Cited by: 15
Author(s): Francisco Altimiras, José García, Ismael Palacios-García, Michael Hurley, Robert M. J. Deacon, Bernardo González, Patricia Cogram
Software Mentions: 3
Published: about 5 years ago

10.3390/genes9060280

The Genetic Architecture Underlying the Evolution of a Rare Piscivorous Life History Form in Brown Trout after Secondary Contact and Strong Introgression
Cited by: 24
Author(s): Arne Jacobs, Martin Hughes, Paige C. Robinson, Colin E. Adams, Kathryn R. Elmer
Software Mentions: 3
Published: about 8 years ago

10.3390/genes9060294

Tissue Specificity and Dynamics of Sex-Biased Gene Expression in a Common Frog Population with Differentiated, Yet Homomorphic, Sex Chromosomes
Cited by: 22
Author(s): Wen‐Juan Ma, Paris Veltsos, Melissa A. Toups, Nicolas Rodrigues, Roberto Sermier, Daniel L. Jeffries, Nicolas Perrin
Software Mentions: 3
Published: about 8 years ago

10.1038/s41598-018-24425-9

A Novel S100A8/A9 Induced Fingerprint of Mesenchymal Stem Cells associated with Enhanced Wound Healing
Cited by: 22
Author(s): Abhijit Basu, Sadaf Munir, Medhanie Mulaw, Karmveer Singh, Diana Crişan, Anca Sindrilaru, Nicolai Treiber, Meinhard Wlaschek, Markus Huber‐Lang, Florian Gebhard, Karin Scharffetter‐Kochanek
Software Mentions: 3
Published: over 8 years ago

10.3389/fnins.2019.01093

Auditory, Cognitive, and Linguistic Factors Predict Speech Recognition in Adverse Listening Conditions for Children With Hearing Loss
Cited by: 50
Author(s): Ryan W. McCreery, Elizabeth Walker, Meredith Spratford, Dawna E. Lewis, Marc A. Brennan
Software Mentions: 3
Published: almost 7 years ago

10.12688/f1000research.13841.1

A comparison of computationally predicted functional metagenomes and microarray analysis for microbial P cycle genes in a unique basalt-soil forest
Cited by: 13
Author(s): Erick S. LeBrun, Sanghoon Kang
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0224179

Collembola laterally move biochar particles
Cited by: 6
Author(s): Stefanie Maaß, Ronja Hückelheim, Matthias C. Rillig
Software Mentions: 3
Published: almost 7 years ago

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