cran: ggplot2 | Projects | Ecosyste.ms: Papers

Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: about 3 years ago
4,921 dependent packages
2,865,232 downloads last month

Enhanced Analysis

Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu

Repository Activity:

Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly

README Analysis:

Science Score: 100/100

Starting Score: 100 points

Bonuses:

+8 Academic maintainer emails
1 maintainers with academic email addresses
+520 Educational commit emails
26 contributors with educational email addresses
+18 Science terms in README
9 scientific terms found in README

Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.3389/fmicb.2020.571913

Complex Internal Microstructure of Feather Follicles on Chicken Skin Promotes the Bacterial Cross-Contamination of Carcasses During the Slaughtering Process
Cited by: 8
Author(s): Xibin Zhang, Zong‐Gen Peng, Peng Li, Yanwei Mao, Ru Shen, Rui Tao, Diao Xiu-guo, Longhai Liu, Yuzhong Zhao, Xin Luo
Software Mentions: 1
Published: about 6 years ago

10.7150/jca.53115

ApoM is an important potential protective factor in the pathogenesis of primary liver cancer
Cited by: 9
Author(s): Yaping Bai, Wenjun Pei, Xiao Zhang, Hui-hao Zheng, Hua Chen, Min Jiao, HU Li-sheng, Shuangqiu Du, Zuyue Gong, Jialin Gao, Yao Zhang
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2020.590035

Analysis of Microbial Water Contamination, Soil Microbial Community Structure, and Soil Respiration in a Collaborative First-Year Students as Scholars Program (SAS)
Cited by: 1
Author(s): Leah T. Stiemsma, Stephen D. Davis, Jay L. Brewster
Software Mentions: 1
Published: almost 6 years ago

10.7150/jca.57082

CMTM3 Overexpression Predicts Poor Survival and Promotes Proliferation and Migration in Pancreatic Cancer
Cited by: 11
Author(s): Zixuan Zhou, Zuyi Ma, Zhenchong Li, Hongkai Zhuang, Chunsheng Liu, Yuanfeng Gong, Shanzhou Huang, Chuanzhao Zhang, Baohua Hou
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.00656

Archaeorhizomycetes Spatial Distribution in Soils Along Wide Elevational and Environmental Gradients Reveal Co-abundance Patterns With Other Fungal Saprobes and Potential Weathering Capacities
Cited by: 27
Author(s): Eric Pinto‐Figueroa, Emily Seddon, Erika Yashiro, Aline Buri, Hélène Niculita‐Hirzel, Jan Roelof van der Meer, Antoine Guisan
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2019.01316

Micronutrient Requirements and Sharing Capabilities of the Human Gut Microbiome
Cited by: 95
Author(s): Dmitry A. Rodionov, Aleksandr A. Arzamasov, Matvei Khoroshkin, Stanislav N. Iablokov, Semen A. Leyn, Scott N. Peterson, Pavel S. Novichkov, Andrei L. Osterman
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2019.00611

Signal Disruption Leads to Changes in Bacterial Community Population
Cited by: 20
Author(s): Michael Schwab, Céline Bergonzi, Jonathan K. Sakkos, Christopher Staley, Qian Zhang, Michael J. Sadowsky, Mikael Elias
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.608856

Comparative Decomposition of Humans and Pigs: Soil Biogeochemistry, Microbial Activity and Metabolomic Profiles
Cited by: 8
Author(s): Jennifer M. DeBruyn, Katharina M. Hoeland, Lois S. Taylor, Jessica D. Stevens, Michelle A. Moats, Sreejata Bandopadhyay, Stephen P. Dearth, Hector F. Castro, Kaitlin K. Hewitt, Shawn R. Campagna, Angela Dautartas, Giovanna M. Vidoli, Amy Z. Mundorff, Dawnie Wolfe Steadman
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13104-020-04980-z

Influence of storage conditions of small volumes of blood on immune transcriptomic profiles
Cited by: 2
Author(s): Rebecca Mathew, Mohammed Toufiq, Valentina Di Mattei, Muna Al Hashmi, Harshitha Shobha Manjunath, Basirudeen Syed Ahamed Kabeer, Rita Calzone, Chiara Cugno, Sara Deola, Sara Tomei
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.01185

The First Temporal and Spatial Assessment of Vibrio Diversity of the Surrounding Seawater of Coral Reefs in Ishigaki, Japan
Cited by: 26
Author(s): Arshia Amin, Feng Gao, Nurhidayu Al‐saari, Pedro Milet Meirelles, Yasushi Yamazaki, Sayaka Mino, Fabiano L. Thompson, Toko Sawabe, Tomoo Sawabe
Software Mentions: 1
Published: about 10 years ago

10.1186/s12968-019-0531-x

Kidney transplantation is associated with reduced myocardial fibrosis. A cardiovascular magnetic resonance study with native T1 mapping
Cited by: 13
Author(s): Mariana Moraes Contti, M. P. Barbosa, Alejandra Del Carmen Villanueva Maurício, Hong Si Nga, Mariana Farina Valiatti, Henrique Mochida Takase, Ariane Moysés Bravin, Luís Gustavo Modelli de Andrade
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.01615

Origin and Evolution of H1N1/pdm2009: A Codon Usage Perspective
Cited by: 7
Author(s): Fucheng Guo, Jian Yang, Junbin Pan, Xianghui Liang, Xuejuan Shen, David M. Irwin, Ruiai Chen, Yongyi Shen
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.00376

Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f
Cited by: 3
Author(s): Michael L. Chen, Eric D. Becraft, Maria Pachiadaki, Julia Brown, Jessica K. Jarett, Josep M. Gasol, Nikolai V. Ravin, Duane P. Moser, Takuro Nunoura, Gerhard J. Herndl, Tanja Woyke, Ramunas Stepanauskas
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2021.683266

RNA-Based Analysis Reveals High Diversity of Plant-Associated Active Fungi in the Atmosphere
Cited by: 1
Author(s): Yan Chen, Xishen Zhu, Ziqiong Hou, Yi Wang, Zhou Yang, Ling Wang, Lin Liu, Jingrong Duan, Sauban Musa Jibril, Chengyun Li
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.01815

Heterotrophic Carbon Fixation in a Salamander-Alga Symbiosis
Cited by: 11
Author(s): John A. Burns, Ryan Kerney, Solange Duhamel
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2020.00454

“In situ similis” Culturing of Plant Microbiota: A Novel Simulated Environmental Method Based on Plant Leaf Blades as Nutritional Pads
Cited by: 10
Author(s): Rahma A. Nemr, Mohamed A. Khalil, Mohamed S. Sarhan, Mohamed Abbas, Hend Elsawey, Hanan H. Youssef, M. Hamza, Ahmed Morsi, Mahmoud El-Tahan, M. B. E. Fayez, Sascha Patz, Katja Witzel, Silke Ruppel, K. F. El-Sahhar, N. A. Hegazi
Software Mentions: 1
Published: over 6 years ago

10.1083/jcb.202104093

Signal strength controls the rate of polarization within CTLs during killing
Cited by: 15
Author(s): Gordon L. Frazer, Christian Gawden-Bone, Nele M. G. Dieckmann, Yukako Asano, Gillian M. Griffiths
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.00591

The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species
Cited by: 13
Author(s): Clara Atterby, Evangelos Mourkas, Guillaume Méric, Ben Pascoe, Helen Wang, Jonas Waldenström, Samuel K. Sheppard, Björn Olsén, Josef D. Järhult, Patrik Ellström
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.03024

Comprehensive and Durable Modulation of Growth, Development, Lifespan and Fecundity in Anopheles stephensi Following Larval Treatment With the Stress Signaling Molecule and Novel Antimalarial Abscisic Acid
Cited by: 3
Author(s): Dean M Taylor, Cassandra Olds, Reagan S Haney, Brandi K. Torrevillas, Shirley Luckhart
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-020-71972-1

Direct identification of a mutation in OsSh1 causing non-shattering in a rice (Oryza sativa L.) mutant cultivar using whole-genome resequencing
Cited by: 13
Author(s): Feng Li, Akira Komatsu, Miki Ohtake, Heesoo Eun, Akifumi Shimizu, Hiroshi Katô
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2019.00847

Dietary Energy Level Promotes Rumen Microbial Protein Synthesis by Improving the Energy Productivity of the Ruminal Microbiome
Cited by: 37
Author(s): Zhongyan Lu, Zhihui Xu, Zongzhuan Shen, Yuanchun Tian, Hong Shen
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.01801

Evaluation of a Potential Bacteriophage Cocktail for the Control of Shiga-Toxin Producing Escherichia coli in Food
Cited by: 20
Author(s): Nicola Mangieri, Claudia Picozzi, Riccardo Cocuzzi, Roberto Foschino
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2019.01069

Microevolution and Adaptive Strategy of Psychrophilic Species Flavobacterium bomense sp. nov. Isolated From Glaciers
Cited by: 38
Author(s): Qing Liu, Hong‐Can Liu, Yu‐Guang Zhou, Yu‐Hua Xin
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.00839

Population Genomic Analysis Reveals a Highly Conserved Mitochondrial Genome in Fusarium asiaticum
Cited by: 13
Author(s): Meixin Yang, Hao Zhang, Theo A. J. van der Lee, C. Waalwijk, Anne D. van Diepeningen, Feng Jing, Balázs Brankovics, Wanquan Chen
Software Mentions: 1
Published: over 6 years ago

10.1186/s13104-019-4251-y

Zero-valent iron sand filtration reduces concentrations of virus-like particles and modifies virome community composition in reclaimed water used for agricultural irrigation
Cited by: 13
Author(s): Jessica Chopyk, Prachi Kulkarni, Daniel J. Nasko, Rhodel Bradshaw, Kalmia E. Kniel, Pei C. Chiu, Manan Sharma, Amy R. Sapkota
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.01767

Differential Localization of Chemotactic Signaling Arrays during the Lifecycle of Vibrio parahaemolyticus
Cited by: 14
Author(s): Jan Heering, Simon Ringgaard
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2020.539540

Analyses of the Bacterial Contamination on Belgian Broiler Carcasses at Retail Level
Cited by: 8
Author(s): Yining Zhu, Marie Joossens, Kurt Houf
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2018.02204

A New Freshwater Cyanosiphovirus Harboring Integrase
Cited by: 22
Author(s): Xu Zhong, Curtis A. Suttle, Anne‐Claire Baudoux, Évelyne Derelle, Jonathan Colombet, Anna Cho, Jessica Caleta, Christophe Six, Stéphan Jacquet
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2018.00118

Western Indian Rural Gut Microbial Diversity in Extreme Prakriti Endo-Phenotypes Reveals Signature Microbes
Cited by: 59
Author(s): Nar Singh Chauhan, Rajesh Pandey, Anupam Mondal, Shashank Gupta, Manoj Kumar Verma, Sweta Jain, Vasim Ahmed, Rutuja Patil, Dhiraj Agarwal, Bhushan Girase, Ankita Shrivastava, Fauzul Mobeen, Vikas Sharma, Tulika Srivastava, Sanjay Juvekar, Bhavana Prasher, Mitali Mukerji, Debasis Dash
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.578115

Transcriptome Profiling Provides Insights Into Potential Antagonistic Mechanisms Involved in Chaetomium globosum Against Bipolaris sorokiniana
Cited by: 16
Author(s): K Darshan, Rashmi Aggarwal, Bishnu Maya Bashyal, Jagmohan Singh, V. Shanmugam, Malkhan Singh Gurjar, Amolkumar U. Solanke
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmed.2021.663396

HLA Variants and Inhibitor Development in Hemophilia A: A Retrospective Case-Controlled Study Using the ATHNdataset
Cited by: 4
Author(s): Joseph R. McGill, Vijaya L. Simhadri, Zuben E. Sauna
Software Mentions: 1
Published: over 5 years ago

10.1111/jcmm.16167

CD63 negatively regulates hepatocellular carcinoma development through suppression of inflammatory cytokine‐induced STAT3 activation
Cited by: 10
Author(s): Shijun Yu, Jingde Chen, Ming Quan, Li Li, Yandong Li
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmed.2020.00064

Immune and Stroma Related Genes in Breast Cancer: A Comprehensive Analysis of Tumor Microenvironment Based on the Cancer Genome Atlas (TCGA) Database
Cited by: 42
Author(s): Ming Xu, Li Yu, Wenhui Li, Qiu Zhao, Qiulei Zhang, Kehao Le, Ziwei Huang, Pengfei Yi
Software Mentions: 1
Published: over 6 years ago

10.3389/fmed.2021.699706

Laboratory Testing Implications of Risk-Stratification and Management of COVID-19 Patients
Cited by: 2
Author(s): Caidong Liu, Ziyu Wang, Wei Wu, Changgang Xiang, Lingxiang Wu, Jie Li, Weiye Hou, Huiling Sun, Youli Wang, Zhenling Nie, Yingdong Gao, Ruisheng Zhang, Hong Tang, Qianghu Wang, Kening Li, Xinyi Xia, Pengping Li, Shukui Wang
Software Mentions: 1
Published: about 5 years ago

10.1111/jcmm.16305

MicroRNA‐130a inhibits proliferation of vascular smooth muscle cells by suppressing autophagy via ATG2B
Cited by: 7
Author(s): Liang Zheng, Zhecun Wang, Zilun Li, Mian Wang, Wenjian Wang, Guangqi Chang
Software Mentions: 1
Published: over 5 years ago

10.3389/fnint.2016.00013

Attentional Resource Allocation in Visuotactile Processing Depends on the Task, But Optimal Visuotactile Integration Does Not Depend on Attentional Resources
Cited by: 27
Author(s): Basil Wahn, Peter König
Software Mentions: 1
Published: over 10 years ago

10.3389/fimmu.2019.00085

Cell Type-Specific Roles of NF-κB Linking Inflammation and Thrombosis
Cited by: 344
Author(s): Marion Mußbacher, Manuel Salzmann, Christine Brostjan, Bastian Hoesel, Christian Schoergenhofer, Hannes Datler, Philipp J. Hohensinner, José Basílio, Peter Petzelbauer, Alice Assinger, Johannes A. Schmid
Software Mentions: 1
Published: over 7 years ago

10.1186/s12889-020-10066-z

Trends in national and subnational wealth related inequalities in use of maternal health care services in Nepal: an analysis using demographic and health surveys (2001–2016)
Cited by: 17
Author(s): Vishnu Prasad Sapkota, Umesh Prasad Bhusal, Kiran Acharya
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2020.614781

Plasma TNFSF13B and TNFSF14 Function as Inflammatory Indicators of Severe Adenovirus Pneumonia in Pediatric Patients
Cited by: 13
Author(s): Huifeng Fan, Bingtai Lu, Can Cao, Hui Li, Diyuan Yang, Li Huang, Tao Ding, Minhao Wu, Gen Liu
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2020.584423

Tumor Infiltrating Effector Memory Antigen-Specific CD8+ T Cells Predict Response to Immune Checkpoint Therapy
Cited by: 37
Author(s): Nicola Principe, Joel Kidman, Siting Goh, Caitlin M. Tilsed, Scott Fisher, Vanessa S. Fear, Catherine A. Forbes, Rachael M. Zemek, Abha Chopra, Mark W. Watson, Ian M. Dick, Louis Boon, Robert A. Holt, Richard Lake, Anna K. Nowak, W. Joost Lesterhuis, Alison M. McDonnell, Jonathan Chee
Software Mentions: 1
Published: almost 6 years ago