cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/s20236912

Evaluation of Vineyard Cropping Systems Using On-Board RGB-Depth Perception
Cited by: 11
Author(s): Héctor Moreno, Víctor Rueda-Ayala, Ángela Ribeiro, José M. Bengochea-Guevara, Juan López, Gerassimos G. Peteinatos, Jaime del Cerro, Dionisio Andújar
Software Mentions: 1
Published: about 5 years ago

10.1002/pro.3558

Evolutionary divergence of the nuclear pore complex from fungi to metazoans
Cited by: 8
Author(s): Kriti Chopra, Shrankhla Bawaria, Radha Chauhan
Software Mentions: 1
Published: about 7 years ago

10.1186/s12953-021-00170-2

ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers
Cited by: 4
Author(s): Rong Zhang, Weitao Jiang, Xin Liu, Yanan Duan, Xiang Li, Yanfang Wang, Yuanmao Jiang, Xiang Shen, Xuesen Chen, Chengmiao Yin, Zhiquan Mao
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.6195

Hardly habitual: chimpanzees and gorillas show flexibility in their motor responses when presented with a causally-clear task
Cited by: 7
Author(s): Sarah L. Jacobson, Lydia M. Hopper
Software Mentions: 1
Published: about 7 years ago

10.3390/proteomes6040045

A Comparative Quantitative LC-MS/MS Profiling Analysis of Human Pancreatic Adenocarcinoma, Adjacent-Normal Tissue, and Patient-Derived Tumour Xenografts
Cited by: 20
Author(s): Orla Coleman, Michael Henry, Fiona O’Neill, Sandra Roche, Niall Swan, Lorraine Boyle, J. J. Murphy, Justine Meiller, Neil T. Conlon, Justin Geoghegan, Kevin C. Conlon, Vincent J. Lynch, Ninfa L. Straubinger, Robert M. Straubinger, G. McVey, M. Moriarty, Martin Clynes
Software Mentions: 1
Published: over 7 years ago

10.3390/proteomes7020016

The Proteome of Tetrasphaera elongata is adapted to Changing Conditions in Wastewater Treatment Plants
Cited by: 16
Author(s): Florian‐Alexander Herbst, Morten Simonsen Dueholm, Reinhard Wimmer, Per Halkjær Nielsen
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12870-021-02837-6

The genetics and physiology of seed dormancy, a crucial trait in common bean domestication
Cited by: 20
Author(s): Afshin Soltani, Katelynn Walter, Andrew T. Wiersma, James P. Santiago, Michelle Quiqley, Daniel H. Chitwood, Timothy G. Porch, Phillip N. Miklas, Phillip E. McClean, Juan M. Osorno, David B. Lowry
Software Mentions: 1
Published: about 5 years ago

10.1042/BSR20193271

Impairment of cell adhesion and migration by inhibition of protein disulphide isomerases in three breast cancer cell lines
Cited by: 9
Author(s): Henry S Young, Lucy M McGowan, Katy A. Jepson, Josephine C. Adams
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms22189964

Fractionated Irradiation of Right Thorax Induces Abscopal Damage on Bone Marrow Cells via TNF-α and SAA
Cited by: 6
Author(s): Yimeng Song, Songling Hu, Junling Zhang, Lin Zhu, Xiaomin Zhao, Qianping Chen, Jianghong Zhang, Yang Bai, Yan Pan, Chunlin Shao
Software Mentions: 1
Published: over 4 years ago

10.3390/cells10071736

In Silico Analysis of the Longevity and Timeline of Individual Germinal Center Reactions in a Primary Immune Response
Cited by: 1
Author(s): Theinmozhi Arulraj, Sebastian C. Binder, Michael Meyer–Hermann
Software Mentions: 1
Published: over 4 years ago

10.3390/cells9010095

Angiogenic Activity of Cytochalasin B-Induced Membrane Vesicles of Human Mesenchymal Stem Cells
Cited by: 25
Author(s): Marina O. Gomzikova, Margarita Zhuravleva, V. V. Vorobev, И. И. Салафутдинов, Alexander Laikov, Sevindzh K. Kletukhina, Е. В. Мартынова, Leysan G. Tazetdinova, Atara Ntekim, Svetlana Khaiboullina, Albert A. Rizvanov
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.58910

S-phase-independent silencing establishment in Saccharomyces cerevisiae
Cited by: 16
Author(s): Davis Goodnight, Jasper Rine
Software Mentions: 1
Published: over 5 years ago

10.3390/cells9102199

HbF Levels in Sickle Cell Disease Are Associated with Proportion of Circulating Hematopoietic Stem and Progenitor Cells and CC-Chemokines
Cited by: 0
Author(s): Caterina P. Minniti, Seda S. Tolu, Kai Wang, Zi Yan, Karl Robert, Shouping Zhang, Andrew Crouch, Joan Uehlinger, Deepa Manwani, Eric E. Bouhassira
Software Mentions: 1
Published: over 5 years ago

10.1016/j.pscychresns.2019.111019

Alcohol consumption is associated with reduced creatine levels in the hippocampus of older adults
Cited by: 4
Author(s): Naiara Demnitz, Anya Topiwala, Enikő Zsoldos, Charlotte J. Stagg, Uzay E. Emir, Heidi Johansen‐Berg, Klaus P. Ebmeier, Claire E. Sexton
Software Mentions: 1
Published: about 6 years ago

10.1017/S0033291717000836

Adolescent friendships predict later resilient functioning across psychosocial domains in a healthy community cohort
Cited by: 147
Author(s): A.-L. van Harmelen, Rogier A. Kievit, Konstantinos Ioannidis, Sharon Neufeld, Peter Jones, Edward T. Bullmore, Raymond J. Dolan, Peter Fonagy, Ian Goodyer
Software Mentions: 1
Published: almost 9 years ago

10.1093/g3journal/jkaa020

A telomere-to-telomere assembly ofOscheius tipulaeand the evolution of rhabditid nematode chromosomes
Cited by: 37
Author(s): Pablo Manuel Gonzalez de la Rosa, Marian Thomson, Urmi Trivedi, Alan S. Tracey, Sophie Tandonnet, Mark Blaxter
Software Mentions: 1
Published: about 5 years ago

10.1017/S0033291719000357

Potential influence of socioeconomic status on genetic correlations between alcohol consumption measures and mental health
Cited by: 42
Author(s): Andries T. Marees, Dirk J.A. Smit, Jue‐Sheng Ong, Stuart MacGregor, Jiyuan An, Damiaan Denys, Florence Vorspan, Wim van den Brink, Eske M. Derks
Software Mentions: 1
Published: almost 7 years ago

10.3389/fgene.2019.00988

mRNA and miRNA Transcriptome Profiling of Granulosa and Theca Layers From Geese Ovarian Follicles Reveals the Crucial Pathways and Interaction Networks for Regulation of Follicle Selection
Cited by: 27
Author(s): Li Qin, Shiyan Hu, Yushi Wang, Yan Deng, Shuang Yang, Jiwei Hu, Liang Li, Jiwen Wang
Software Mentions: 1
Published: over 6 years ago

10.3390/cells10030664

Combining Nanopore and Illumina Sequencing Permits Detailed Analysis of Insertion Mutations and Structural Variations Produced by PEG-Mediated Transformation in Ostreococcus tauri
Cited by: 3
Author(s): Julie Thomy, Frédéric Sanchez, Marta Gut, Fernando Cruz, Tyler Alioto, Gwenaël Piganeau, Nigel Grimsley, Sheree Yau
Software Mentions: 1
Published: almost 5 years ago

10.7554/eLife.66815

Human airway cells prevent SARS-CoV-2 multibasic cleavage site cell culture adaptation
Cited by: 64
Author(s): Mart M. Lamers, Anna Z Mykytyn, Tim I Breugem, Yiquan Wang, Douglas C. Wu, Samra Riesebosch, Petra B. van den Doel, Debby Schipper, Theo M. Bestebroer, Nicholas C. Wu, Bart L. Haagmans
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.esxm.2020.100315

Male Circumcision Due to Phimosis as the Procedure That Is Not Only Relieving Clinical Symptoms of Phimosis But Also Improves the Quality of Sexual Life
Cited by: 13
Author(s): Mateusz Czajkowski, Katarzyna Czajkowska, Karolina Zarańska, Alicja Giemza, Jakub Kłącz, Małgorzata Sokołowska‐Wojdyło, Marcin Matuszewski
Software Mentions: 1
Published: about 5 years ago

10.3390/cells9102159

Characterization of Hematopoiesis in Sickle Cell Disease by Prospective Isolation of Stem and Progenitor Cells
Cited by: 11
Author(s): Seda S. Tolu, Kai Wang, Zi Yan, Shouping Zhang, Karl Roberts, Andrew Crouch, Gracy Sebastian, Mark Chaitowitz, Eric D. Fornari, Evan M. Schwechter, Joan Uehlinger, Deepa Manwani, Caterina P. Minniti, Eric E. Bouhassira
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2020.01036

Kuijieyuan Decoction Improved Intestinal Barrier Injury of Ulcerative Colitis by Affecting TLR4-Dependent PI3K/AKT/NF-κB Oxidative and Inflammatory Signaling and Gut Microbiota
Cited by: 69
Author(s): Baohai Liu, Xuehua Piao, Wei Niu, Qingyu Zhang, Chi Ma, Tong Wu, QiChang Gu, Tingfang Cui, Shuangdi Li
Software Mentions: 1
Published: over 5 years ago

10.3758/s13423-018-1553-3

Do confidence ratings prime confidence?
Cited by: 9
Author(s): Kit S. Double, Damian P. Birney
Software Mentions: 1
Published: about 7 years ago

10.1016/j.psyneuen.2018.02.031

Prevalence and correlates of low-grade systemic inflammation in adult psychiatric inpatients: An electronic health record-based study
Cited by: 75
Author(s): Emanuele F. Osimo, Rudolf N. Cardinal, Peter B. Jones, Golam M. Khandaker
Software Mentions: 1
Published: almost 8 years ago

10.1007/s00213-018-4969-6

Validation and optimisation of a touchscreen progressive ratio test of motivation in male rats
Cited by: 17
Author(s): Jonathan M. Hailwood, Christopher Heath, Trevor W. Robbins, Lisa M. Saksida, Timothy J. Bussey
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2018.03360

Exploiting the Richness of Environmental Waterborne Bacterial Species to Find Natural Legionella pneumophila Competitors
Cited by: 22
Author(s): Marie Hélène Corre, Vincent Delafont, Anasthasia Legrand, Jean‐Marc Berjeaud, Julien Verdon
Software Mentions: 1
Published: about 7 years ago

10.1017/S1368980017003275

Meeting UK dietary recommendations is associated with higher estimated consumer food costs: an analysis using the National Diet and Nutrition Survey and consumer expenditure data, 2008–2012
Cited by: 39
Author(s): Nicholas Jones, Tammy Y.N. Tong, Pablo Monsivais
Software Mentions: 1
Published: about 8 years ago

10.7717/peerj.7451

Profiling the lncRNA-miRNA-mRNA ceRNA network to reveal potential crosstalk between inflammatory bowel disease and colorectal cancer
Cited by: 28
Author(s): Fangfang Sun, Weiwei Liang, Kejun Tang, Mengying Hong, Jing Qian
Software Mentions: 1
Published: over 6 years ago

10.3390/cells10082081

Ewing Sarcoma-Derived Extracellular Vesicles Impair Dendritic Cell Maturation and Function
Cited by: 13
Author(s): Hendrik Gassmann, Kira Schneider, Valentina Evdokimova, Peter Ruzanov, Sebastian Johannes Schober, Busheng Xue, Kristina von Heyking, Melanie Thiede, G. Richter, Michael W. Pfaffl, Elfriede Noeßner, Lincoln Stein, Poul H. Sorensen, Stefan Burdach, Uwe Thiel
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.60095

Peripheral natural killer cells in chronic hepatitis B patients display multiple molecular features of T cell exhaustion
Cited by: 15
Author(s): Marie Marotel, Marine Villard, Annabelle Drouillard, Issam Tout, Laurie Besson, Omran Allatif, Marine Pujol, Yamila Rocca, Michelle Ainouze, Guillaume Roblot, Sébastien Viel, Melissa Gomez, V. Loustaud, Sophie Alain, David Durantel, Thierry Walzer, Uzma Hasan, Antoine Marçais
Software Mentions: 1
Published: about 5 years ago

10.1039/d0ra03872e

Sequential sequestrations increase the incorporation and retention of multiple growth factors in mineralized collagen scaffolds
Cited by: 10
Author(s): Aleczandria S. Tiffany, Maynard M. Dewey, Brendan A.C. Harley
Software Mentions: 1
Published: about 6 years ago

10.1098/rsos.150358

Differential responses of coral larvae to the colour of ambient light guide them to suitable settlement microhabitat
Cited by: 42
Author(s): Marie E. Strader, Sarah W. Davies, Mikhail V. Matz
Software Mentions: 1
Published: over 10 years ago

10.3389/fphar.2019.01508

Combined Use of Astragalus Polysaccharide and Berberine Attenuates Insulin Resistance in IR-HepG2 Cells via Regulation of the Gluconeogenesis Signaling Pathway
Cited by: 19
Author(s): Zhu Mao, Min Lin, Xin Zhang, Lu Ping Qin
Software Mentions: 1
Published: about 6 years ago

10.1186/s12903-020-01255-8

Accuracy of remote diagnoses using intraoral scans captured in approximate true color: a pilot and validation study in teledentistry
Cited by: 17
Author(s): Sabrina Jenny Steinmeier, Daniel B. Wiedemeier, Christoph H. F. Hämmerle, Sven Mühlemann
Software Mentions: 1
Published: over 5 years ago

10.1098/rsos.150677

Predicting plant attractiveness to pollinators with passive crowdsourcing
Cited by: 18
Author(s): Christie A. Bahlai, Douglas A. Landis
Software Mentions: 1
Published: over 9 years ago

10.1186/s13395-018-0179-5

HIF prolyl hydroxylase inhibition protects skeletal muscle from eccentric contraction-induced injury
Cited by: 14
Author(s): Andrew N. Billin, Samuel E. Honeycutt, Alan V. McDougal, Jaclyn P. Kerr, Zhe Chen, Johannes M. Freudenberg, Deepak K. Rajpal, G.H. Luo, Henning F. Kramer, Robert S. Geske, Frank Fang, Bert Yao, Richard V. Clark, John J. Lepore, Alex Cobitz, Ram R. Miller, Kazunori Nosaka, Aaron C. Hinken, Alan J. Russell
Software Mentions: 1
Published: about 7 years ago

10.1186/s13395-019-0191-4

Late-onset megaconial myopathy in mice lacking group I Paks
Cited by: 12
Author(s): Giselle A. Joseph, Margaret Hung, Aviva Goel, Mingi Hong, Marysia-Kolbe Rieder, Noam D. Beckmann, Madhavika N. Serasinghe, Jerry E. Chipuk, Parvathi Madhavi Devarakonda, David J. Goldhamer, Paulina Aldana-Hernández, Jonathan M. Curtis, René L. Jacobs, Robert M. Krauss
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.celrep.2017.09.092

Fumarate Hydratase Loss Causes Combined Respiratory Chain Defects
Cited by: 59
Author(s): Petros A. Tyrakis, Marie E. Yurkovich, Marco Sciacovelli, Evangelia K. Papachristou, Hannah R. Bridges, Edoardo Gaude, A. Schreiner, Clive S. D’Santos, Judy Hirst, Juan R. Hernández-Fernaud, Roger Springett, John R. Griffiths, Christian Frezza
Software Mentions: 1
Published: over 8 years ago

10.3389/fphar.2021.626766

A Review of the Dose Justification of Phase 3 Trials to Regulatory Authorities for Drugs Intended for the Treatment of Type 2 Diabetes in Europe
Cited by: 0
Author(s): Jeroen V. Koomen, Jasper Stevens, Margje H. Monster‐Simons, Hiddo J.L. Heerspink, Peter G. M. Mol
Software Mentions: 1
Published: almost 5 years ago

10.1093/g3journal/jkaa052

Genome sequence of Monilinia vaccinii-corymbosi sheds light on mummy berry disease infection of blueberry and mating type
Cited by: 2
Author(s): Ashley G. Yow, Yucheng Zhang, Kamaldeep Bansal, Stephen Eacker, Shawn Sullivan, Ivan Liachko, Marc A. Cubeta, Jeffrey A. Rollins, Hamid Ashrafi
Software Mentions: 1
Published: about 5 years ago

10.1093/scan/nsaa081

Newborn white matter microstructure moderates the association between maternal postpartum depressive symptoms and infant negative reactivity
Cited by: 15
Author(s): Saara Nolvi, Jetro J. Tuulari, Tuomas I. Lavonius, Noora M. Scheinin, Satu J. Lehtola, Maria Lavonius, Harri Merisaari, Jani Saunavaara, Riikka Korja, Eeva‐Leena Kataja, Juho Pelto, Riitta Parkkola, Lena Karlsson, Hasse Karlsson
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-31047-8

Analyses of ovarian activity reveal repeated evolution of post-reproductive lifespans in toothed whales
Cited by: 58
Author(s): Stephen Ellis, Daniel W. Franks, Stuart Nattrass, Thomas E. Currie, Michael A. Cant, D. K. Giles, Kenneth C. Balcomb, Darren P. Croft
Software Mentions: 1
Published: over 7 years ago

10.1155/2021/3336770

TLR3 Serves as a Prognostic Biomarker and Associates with Immune Infiltration in the Renal Clear Cell Carcinoma Microenvironment
Cited by: 5
Author(s): Guodong Liao, Jia Lv, Alin Ji, Shuai Meng, Chao Chen
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-018-31043-y

Scenario analysis of ecosystem service changes and interactions in a mountain-oasis-desert system: a case study in Altay Prefecture, China
Cited by: 46
Author(s): Qi Fu, Ying Hou, Bo Wang, Xu Bi, Bo Li, Xinshi Zhang
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-31085-2

Analysis By Deep Sequencing of Discontinued Neurotropic Yellow Fever Vaccine Strains
Cited by: 17
Author(s): Andrew S. Beck, Thomas G. Wood, Steven G. Widen, Jill C. Thompson, Alan D.T. Barrett
Software Mentions: 1
Published: over 7 years ago

10.1007/s11060-018-2867-8

Prognostic relevance of mutations and copy number alterations assessed with targeted next generation sequencing in IDH mutant grade II glioma
Cited by: 22
Author(s): Maarten M.J. Wijnenga, Pim J. French, Hendrikus J. Dubbink, Winand N.M. Dinjens, Peggy N. Atmodimedjo, Johan M. Kros, Ruth Fleischeuer, Clemens Dirven, Arnaud Vincent, Martin J. van den Bent
Software Mentions: 1
Published: almost 8 years ago

10.1111/cpr.12724

Rbm14 maintains the integrity of genomic DNA during early mouse embryogenesis via mediating alternative splicing
Cited by: 7
Author(s): Jing Li, Chenxin Wang, Guihai Feng, Linlin Zhang, Guilai Chen, Hao Sun, Jiaqiang Wang, Ying Zhang, Qi Zhou, Wei Li
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-31950-0

Natural variation among Arabidopsis thaliana accessions in tolerance to high magnesium supply
Cited by: 15
Author(s): Yaofang Niu, Ping Chen, Yu Zhang, Zhongwei Wang, Shikai Hu, Gulei Jin, Caixian Tang, Longbiao Guo
Software Mentions: 1
Published: over 7 years ago

10.1007/s00018-020-03597-6

The functional characteristics of optogenetic gene therapy for vision restoration
Cited by: 8
Author(s): Moritz Lindner, Michael James Gilhooley, Stuart N. Peirson, Steven Hughes, Mark W. Hankins
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.6809

Identification of a putative competitive endogenous RNA network for lung adenocarcinoma using TCGA datasets
Cited by: 14
Author(s): Yuanyong Wang, Tong Lu, Yang Wo, Xiao Sun, Shicheng Li, Shuncheng Miao, Yanting Dong, Xiaoliang Leng, Wenjie Jiao
Software Mentions: 1
Published: almost 7 years ago

10.1186/s11658-021-00261-0

β-elemene alleviates airway stenosis via the ILK/Akt pathway modulated by MIR143HG sponging miR-1275
Cited by: 6
Author(s): Guoying Zhang, Cheng Xue, Yiming Zeng
Software Mentions: 1
Published: over 4 years ago

10.1016/j.cmet.2017.09.003

Citrobacter rodentium Subverts ATP Flux and Cholesterol Homeostasis in Intestinal Epithelial Cells In Vivo
Cited by: 59
Author(s): Cédric N. Berger, Valérie F. Crepin, Theodoros I. Roumeliotis, James C. Wright, Danielle Carson, Meirav Pevsner‐Fischer, R. Christopher D. Furniss, Gordon Dougan, Mally Dori-Bachash, Lu Yu, Abigail Clements, James W. Collins, Eran Elinav, Gérald Larrouy-Maumus, Jyoti S. Choudhary, Gad Frankel
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-32338-w

Green microalgae in marine coastal waters: The Ocean Sampling Day (OSD) dataset
Cited by: 70
Author(s): Margot Tragin, Daniel Vaulot
Software Mentions: 1
Published: over 7 years ago

10.1042/BSR20190482

High-throughput sequencing analysis of genes encoding the B-lymphocyte receptor heavy-chain CDR3 in renal and peripheral blood of IgA nephropathy
Cited by: 4
Author(s): Dapeng Chen, Zheng Zhang, Yue Yang, Quan Hong, Wenge Li, Zhuo Li
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2021.693167

Suppression of Inflammatory Cardiac Cytokine Network in Rats with Untreated Obesity and Pre-Diabetes by AT2 Receptor Agonist NP-6A4
Cited by: 7
Author(s): Madhavi P. Gavini, Abuzar Mahmood, Anthony Belenchia, Paige Beauparlant, Sumit Kumar, Sivakumar Ardhanari, Vincent G. DeMarco, Lakshmi Pulakat
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms221910469

The Same against Many: AtCML8, a Ca2+ Sensor Acting as a Positive Regulator of Defense Responses against Several Plant Pathogens
Cited by: 6
Author(s): Xiaoyang Zhu, Julie Mazard, Eugénie Robe, Sarah Pignoly, Marielle Aguilar, Hélène San Clemente, Emmanuelle Lauber, Richard Berthomé, Jean‐Philippe Galaud
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2021.696229

Chromosome Level Assembly of Homozygous Inbred Line ‘Wongyo 3115’ Facilitates the Construction of a High-Density Linkage Map and Identification of QTLs Associated With Fruit Firmness in Octoploid Strawberry (Fragaria × ananassa)
Cited by: 10
Author(s): Hye-Eun Lee, Abinaya Manivannan, Sun Yi Lee, Koeun Han, Jun-Geol Yeum, Jinkwan Jo, Jinhee Kim, Il Rae Rho, Ye Rin Lee, Eun Su Lee, Byoung‐Cheorl Kang, Do-Sun Kim
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.28865

Nanoscale architecture of the Schizosaccharomyces pombe contractile ring
Cited by: 75
Author(s): Nathan A. McDonald, Abigail Lind, Sarah E. Smith, Rong Li, Kathleen L. Gould
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0247367

SARS-CoV-2 viral shedding characteristics and potential evidence for the priority for faecal specimen testing in diagnosis
Cited by: 18
Author(s): Yuan Chen, Hongling Wang, Kefeng Li, An Tang, Yongyu Dai, Bing Wu, Hui Zhang, Jiabei Chen, Jie-nan Liu, Wenjie Wu, GU Song-ye, Hai Wang, Haodi Xu, Mingyu Wu, Menglu Yu, Yuchao Wang, Xinwei Yu, J. He, Shelan Liu, Yongli Zhang, Zhendong Tong, Jianbo Yan
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-018-32693-8

Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage
Cited by: 52
Author(s): Katarzyna Bachanek‐Bankowska, Antonello Di Nardo, Jemma Wadsworth, Valérie Mioulet, Giulia Pezzoni, Santina Grazioli, Emiliana Brocchi, Sharmila Chapagain Kafle, Ranjani Hettiarachchi, Pradeep Lakpriya Kumarawadu, Ibrahim Eldaghayes, Abdunaser Dayhum, Deodass Meenowa, Soufien Sghaier, Hafsa Madani, Nabil Abouchoaib, Bui H. Hoang, Pham P. Vu, Kinzang Dukpa, Ratna B. Gurung, Sangay Tenzin, Ulrich Wernery, Alongkorn Panthumart, Kingkarn Boonsuya Seeyo, Wilai Linchongsubongkoch, Anthony Relmy, Labib Bakkali‐Kassimi, A. V. Scherbakov, Donald P. King, Nick J. Knowles
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0209742

Range overlap between the sword-billed hummingbird and its guild of long-flowered species: An approach to the study of a coevolutionary mosaic
Cited by: 11
Author(s): Florencia Soteras, Marcela Moré, Ana C. Ibañez, María del Rosario Iglesias, Andrea A. Cocucci
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0154949

Subsets of Visceral Adipose Tissue Nuclei with Distinct Levels of 5-Hydroxymethylcytosine
Cited by: 8
Author(s): Ping Yu, Lexiang Ji, Kevin J. Lee, Miao Yu, Chuan He, Suresh Ambati, Elizabeth C. McKinney, Crystal Lyles Jackson, Clifton A. Baile, Robert J. Schmitz, Richard B. Meagher
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0224664

Development of a quantitative PCR assay for the detection and enumeration of a potentially ciguatoxin-producing dinoflagellate, Gambierdiscus lapillus (Gonyaulacales, Dinophyceae)
Cited by: 15
Author(s): Anna Liza Kretzschmar, Arjun Verma, Gurjeet S. Kohli, Shauna A. Murray
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-33357-3

Placental FKBP51 mediates a link between second trimester maternal anxiety and birthweight in female infants
Cited by: 10
Author(s): Katie L. Togher, Gerard W. O’Keeffe, Ali S. Khashan, Gerard Clarke, Louise C. Kenny
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms221910385

C9ORF72 Repeat Expansion Affects the Proteome of Primary Skin Fibroblasts in ALS
Cited by: 6
Author(s): Marta Lualdi, Adeena Shafique, Edoardo Pedrini, Luisa Pieroni, Viviana Greco, Massimo Castagnola, Giorgia Cucina, Lucia Corrado, Alice Di Pierro, Fabiola De Marchi, Lara Camillo, Claudia Colombrita, Marianna D’Anca, Tiziana Alberio, Sandra D’Alfonso, Mauro Fasano
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-018-33525-5

E-cadherin loss induces targetable autocrine activation of growth factor signalling in lobular breast cancer
Cited by: 53
Author(s): K.L. Teo, Laura Gómez-Cuadrado, Milou Tenhagen, Adam Byron, Max A K Rätze, Miranda van Amersfoort, Jojanneke Renes, Eric Strengman, Amit Mandoli, Abhishek A. Singh, Joost H.A. Martens, Hendrik G. Stunnenberg, Paul J. van Diest, Valerie G. Brunton, Patrick W.B. Derksen
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.52770

Proximity proteomics in a marine diatom reveals a putative cell surface-to-chloroplast iron trafficking pathway
Cited by: 13
Author(s): Jernej Turnšek, John K. Brunson, Maria del Pilar Martinez Viedma, Thomas J. Deerinck, Aleš Horák, Miroslav Oborník, Vincent A. Bielinski, Andrew E. Allen
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0103934

Improvement of Prediction Ability for Genomic Selection of Dairy Cattle by Including Dominance Effects
Cited by: 71
Author(s): Chuanyu Sun, P.M. VanRaden, J.B. Cole, Jeffrey R. O’Connell
Software Mentions: 1
Published: over 11 years ago

10.1186/s13048-019-0518-0

Low BCL7A expression predicts poor prognosis in ovarian cancer
Cited by: 14
Author(s): Ziqian Sun, Liang Sun, Miao He, Ying Pang, Zhaoying Yang, Junrong Wang
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0237701

Evaluating the capacity of species distribution modeling to predict the geographic distribution of the mangrove community in Mexico
Cited by: 14
Author(s): Karla Rodríguez-Medina, Carlos Yáñez‐Arenas, A. Townsend Peterson, Jorge Euán Ávila, Jorge A. Herrera-Silveira
Software Mentions: 1
Published: over 5 years ago

10.1186/2193-1801-3-547

Genetic analysis of resistance to Pseudomonas syringae pv. actinidiae (Psa) in a kiwifruit progeny test: an application of generalised linear mixed models (GLMMs)
Cited by: 10
Author(s): Nihal H De Silva, L. D. Gea, R. G. Lowe
Software Mentions: 1
Published: over 11 years ago

10.3390/microorganisms7120684

Synergistic Effects of Probiotics and Phytobiotics on the Intestinal Microbiota in Young Broiler Chicken
Cited by: 40
Author(s): Hao Ren, Wilfried Vahjen, Temesgen Hailemariam Dadi, Eva-Maria Saliu, Farshad Goodarzi Boroojeni, Jürgen Zentek
Software Mentions: 1
Published: about 6 years ago

10.1007/s11060-017-2418-8

Does early resection of presumed low-grade glioma improve survival? A clinical perspective
Cited by: 34
Author(s): Maarten M.J. Wijnenga, Tariq Mattni, Pim J. French, Geert-Jan Rutten, Sieger Leenstra, Fred Kloet, Martin J.B. Taphoorn, Martin J. van den Bent, Clemens Dirven, Marie-Lise van Veelen, Arnaud Vincent
Software Mentions: 1
Published: almost 9 years ago

10.3390/microorganisms9020372

Investigation of Commensal Escherichia coli Populations of Cormorant Hatchlings in the Absence of Anthropogenic Impacts in Remote Areas of West Mongolia
Cited by: 2
Author(s): Muhammad Moman Khan, Rafał Kolenda, Peter Schierack, Jörg Weinreich, Stefan Rödiger, Jakob Schierack, Michael Stubbe, Davaa Lkhagvasuren, Sebastian Guenther, Katharina Schaufler
Software Mentions: 1
Published: almost 5 years ago

10.7554/eLife.12850

Wnt, Ptk7, and FGFRL expression gradients control trunk positional identity in planarian regeneration
Cited by: 61
Author(s): Rachel M. Lander, Christian P. Petersen
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0235190

Two decades of little change: An analysis of U.S. medical school basic science faculty by sex, race/ethnicity, and academic rank
Cited by: 29
Author(s): Christopher L. Bennett, Raquel Y. Salinas, Joseph J. Locascio, Edward W. Boyer
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-35460-x

The timing and widespread effects of the largest Holocene volcanic eruption in Antarctica
Cited by: 36
Author(s): Dermot Antoniades, Santiago Giralt, Adelina Geyer, Antonio M. Álvarez‐Valero, Sergi Pla-Rabés, Ignacio Granados, Emma Liu, Manuel Toro, John L. Smellie, Marc Oliva
Software Mentions: 1
Published: about 7 years ago

10.1016/j.stemcr.2015.05.002

KeyGenes, a Tool to Probe Tissue Differentiation Using a Human Fetal Transcriptional Atlas
Cited by: 104
Author(s): Matthias S Roost, Liesbeth van Iperen, Yavuz Ariyürek, Henk P.J. Buermans, Wibowo Arindrarto, Harsha D. Devalla, Robert Passier, Christine L. Mummery, Françoise Carlotti, Eelco J.P. de Koning, Erik W. van Zwet, Jelle J. Goeman, Susana M. Chuva de Sousa Lopes
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-018-35834-1

Dorsolateral and medial prefrontal cortex mediate the influence of incidental priming on economic decision making in obesity
Cited by: 18
Author(s): Filip Morys, Stefan Bode, Annette Horstmann
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-33252-x

The proton and metal binding sites responsible for the pH-dependent green-red bioluminescence color tuning in firefly luciferases
Cited by: 12
Author(s): Vadim R. Viviani, Gabriele Verônica de Mello Gabriel, Vanessa R. Bevilaqua, A. Simões, Takashi Hirano, Paulo Sérgio Lopes-de-Oliveira
Software Mentions: 1
Published: about 7 years ago

10.1155/2020/4270957

Transcriptional Expressions of CXCL9/10/12/13 as Prognosis Factors in Breast Cancer
Cited by: 11
Author(s): Yan Li, Mingqiang Liang, Yuxiang Lin, Jinxing Lv, Minyan Chen, Peng Zhou, Fangmeng Fu, Chuan Wang
Software Mentions: 1
Published: over 5 years ago

10.2196/21656

Using Infodemiology Metrics to Assess Public Interest in Liver Transplantation: Google Trends Analysis
Cited by: 2
Author(s): Maria Effenberger, Andreas Kronbichler, Erica L. Bettac, Felix Grabherr, Christoph Grander, Timon E. Adolph, Gert Mayer, Heinz Zoller, Paul Perco, Herbert Tilg
Software Mentions: 1
Published: over 4 years ago

10.3389/fphar.2021.713197

Comprehensive Analysis of Fecal Microbiome and Metabolomics in Hepatic Fibrosis Rats Reveal Hepatoprotective Effects of Yinchen Wuling Powder From the Host-Microbial Metabolic Axis
Cited by: 5
Author(s): Yumeng Zhang, Min Zhao, Xue Jiang, Qiaoyu Qiao, Tingting Liu, Chunjie Zhao, Miao Wang
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-018-36248-9

The impact of cigarette smoke exposure, COPD, or asthma status on ABC transporter gene expression in human airway epithelial cells
Cited by: 31
Author(s): Jennifer A. Aguiar, Andrea Tamminga, Briallen Lobb, Ryan D. Huff, Julie T. Nguyen, Yechan Kim, Anna Dvorkin‐Gheva, Martin R. Stämpfli, Andrew C. Doxey, Jeremy A. Hirota
Software Mentions: 1
Published: about 7 years ago

10.3390/microorganisms8101539

Comparison of Nucleic Acid Extraction Methods for a Viral Metagenomics Analysis of Respiratory Viruses
Cited by: 9
Author(s): Marina Sabatier, Antonin Bal, Grégory Destras, Hadrien Regue, Grégory Quéromès, Valérie Cheynet, Bruno Lina, Claire Bardel, Karen Brengel‐Pesce, Vincent Navratil, Laurence Josset
Software Mentions: 1
Published: over 5 years ago

10.1523/JNEUROSCI.2238-19.2020

Paradoxically Sparse Chemosensory Tuning in Broadly Integrating External Granule Cells in the Mouse Accessory Olfactory Bulb
Cited by: 3
Author(s): Xingjian Zhang, Julian P. Meeks
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0069185

Identifying Issue Frames in Text
Cited by: 10
Author(s): Eyal Sagi, Daniel Diermeier, Stefan Kaufmann
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-018-36188-4

Deciphering the evolution of Deception Island’s magmatic system
Cited by: 28
Author(s): Adelina Geyer, Antonio M. Álvarez‐Valero, Guillem Gisbert, M. Aulinas, Daniel Hernández-Barreña, Agustín Lobo, Joan Martı́
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0254031

Anemia design effects in cluster surveys of women and young children in refugee settings
Cited by: 0
Author(s): Erin Hulland, Eva Leidman, Caroline Wilkinson, Mélody Tondeur, Oleg Bilukha
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2020.00387

Water Stable Isotopes in Ecohydrological Field Research: Comparison Between In Situ and Destructive Monitoring Methods to Determine Soil Water Isotopic Signatures
Cited by: 22
Author(s): Angelika Kübert, Sinikka Paulus, Adrian Dahlmann, Christiane Werner, Youri Rothfuss, Natalie Orlowski, Maren Dubbert
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12884-020-03077-6

Metformin and insulin treatment of gestational diabetes: effects on inflammatory markers and IGF-binding protein-1 – secondary analysis of a randomized controlled trial
Cited by: 9
Author(s): Mikael S. Huhtala, Kristiina Tertti, Juuso Juhila, Timo Sorsa, Tapani Rönnemaa
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms7110517

Internal and External Microbial Community of the Thitarodes Moth, the Host of Ophiocordyceps sinensis
Cited by: 8
Author(s): Yi Liang, Yongfeng Hong, Zhan-Hua Mai, Qijiong Zhu, Lianxian Guo
Software Mentions: 1
Published: over 6 years ago

10.1186/s12884-020-02961-5

Gut microbiota in early pregnancy among women with Hyperglycaemia vs. Normal blood glucose
Cited by: 16
Author(s): Beibei Gao, Mengdan Zhong, Qiong Shen, Ying Wu, Mengdie Cao, Songwen Ju, Lei Chen
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13048-020-0613-2

Integrated bioinformatics analysis for the screening of hub genes and therapeutic drugs in ovarian cancer
Cited by: 47
Author(s): Dan Yang, Yulong He, Bo Wu, Yan Deng, Nan Wang, Menglin Li, Yang Liu
Software Mentions: 1
Published: about 6 years ago

10.3390/microorganisms9051081

Lactic Starter Dose Shapes S. aureus and STEC O26:H11 Growth, and Bacterial Community Patterns in Raw Milk Uncooked Pressed Cheeses
Cited by: 2
Author(s): Justine Piqueras, Christophe Chassard, Cécile Callon, Étienne Rifa, Sébastien Theil, Annick Lebecque, Céline Delbès
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-018-37768-0

Bioinformatics Analysis of Metabolism Pathways of Archaeal Energy Reserves
Cited by: 22
Author(s): Liang Wang, Qinghua Liu, Xiang Wu, Yue Huang, Michael J. Wise, Zhanzhong Liu, Wei Wang, Jian Hu, Qianqian Wang
Software Mentions: 1
Published: about 7 years ago

10.2196/14766

Serious Gaming During Multidisciplinary Rehabilitation for Patients With Chronic Pain or Fatigue Symptoms: Mixed Methods Design of a Realist Process Evaluation
Cited by: 8
Author(s): Miel A. P. Vugts, A.M.E.E. Zedlitz, Margot C. W. Joosen, Hubertus J. M. Vrijhoef
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.23382

Mice deficient of Myc super-enhancer region reveal differential control mechanism between normal and pathological growth
Cited by: 49
Author(s): Kashyap Dave, Inderpreet Sur, Jian Yan, Jilin Zhang, Eevi Kaasinen, Fan Zhong, Leander Blaas, Xiaoze Li, Shabnam Kharazi, Charlotte Gustafsson, Annick De Paepe, Robert Månsson, Jussi Taipale
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-38274-z

IPSE, a urogenital parasite-derived immunomodulatory protein, ameliorates ifosfamide-induced hemorrhagic cystitis through downregulation of pro-inflammatory pathways
Cited by: 15
Author(s): Evaristus C. Mbanefo, Liu Le, Rebecca Zee, Nirad Banskota, Kenji Ishida, Luke F. Pennington, Justin I. Odegaard, Theodore S. Jardetzky, Abdulaziz Alouffi, Franco H. Falcone, Michael H. Hsieh
Software Mentions: 1
Published: about 7 years ago

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Papers Mentioning ggplot2 11,441