cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1371/journal.pgen.1008920

Developmental loss of neurofibromin across distributed neuronal circuits drives excessive grooming in Drosophila
Cited by: 11
Author(s): Lanikea B. King, Tamara Boto, Valentina Botero, Ari Aviles, Breanna M. Jomsky, Chevara Joseph, James A. Walker, Seth M. Tomchik
Software Mentions: 1
Published: about 6 years ago

10.1002/cam4.2150

Long noncoding RNA RP11‐547D24.1 regulates proliferation and migration in papillary thyroid carcinoma: Identification and validation of a novel long noncoding RNA through integrated analysis of TCGA database
Cited by: 18
Author(s): Kai Guo, Lili Chen, Yunjun Wang, Kai Qian, Xiaoke Zheng, Wenyu Sun, Tuanqi Sun, Yi Wu, Zhuoying Wang
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pgen.1004167

Insertional Mutagenesis and Deep Profiling Reveals Gene Hierarchies and a Myc/p53-Dependent Bottleneck in Lymphomagenesis
Cited by: 18
Author(s): Camille Huser, Kathryn Gilroy, Jeroen de Ridder, Anna Kilbey, Gillian Borland, Nancy MacKay, Alma Jenkins, Margaret Bell, Paweł Herzyk, Louise van der Weyden, David J. Adams, Alistair G. Rust, Ewan R. Cameron, James C. Neil
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pgen.1008432

UMAP reveals cryptic population structure and phenotype heterogeneity in large genomic cohorts
Cited by: 151
Author(s): Alex Diaz-Papkovich, Luke Anderson-Trocmé, Chief Ben-Eghan, Simon Gravel
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12931-017-0543-8

Costs and health-related quality of life in Alpha-1-Antitrypsin Deficient COPD patients
Cited by: 15
Author(s): Florian Karl, Rolf Holle, Robert Bals, Timm Greulich, Rudolf A. Jörres, Annika Karch, Armin Koch, Stefan Karrasch, Reiner Leidl, Holger Schulz, Claus Vogelmeier, Margarethe Wacker
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pgen.1007886

Narya, a RING finger domain-containing protein, is required for meiotic DNA double-strand break formation and crossover maturation in Drosophila melanogaster
Cited by: 8
Author(s): Cathleen M. Lake, Rachel J. Nielsen, Amanda M. Bonner, Salam Eche, Sanese Kania White-Brown, Kim S. McKim, R. Scott Hawley
Software Mentions: 1
Published: over 7 years ago

10.1186/s12931-021-01697-w

Longitudinal analysis of sinus microbiota post endoscopic surgery in patients with cystic fibrosis and chronic rhinosinusitis: a pilot study
Cited by: 5
Author(s): Brett Wagner Mackenzie, Camila Dassi, Anitha Vivekanandan, Melissa Zoing, Richard Douglas, Kristi Biswas
Software Mentions: 1
Published: over 5 years ago

10.1186/s12931-021-01707-x

Association of plasma mitochondrial DNA with COPD severity and progression in the SPIROMICS cohort
Cited by: 12
Author(s): William Z. Zhang, Katherine L. Hoffman, Kristen T. Schiffer, Clara Oromendia, Mary J. Rice, Igor Barjaktarević, Stephen P. Peters, Nirupama Putcha, Russell P. Bowler, James M. Wells, David Couper, Wassim W. Labaki, Jeffrey L. Curtis, MeiLan K. Han, Robert Paine, Prescott G. Woodruff, Gerard J. Criner, Nadia N. Hansel, Iván Díaz, Karla V. Ballman, Kiichi Nakahira, Mary E. Choi, Fernando J. Martínez, Augustine M.K. Choi, Suzanne M. Cloonan
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2020.618598

Secreted Phosphoprotein 1 Expression in Retinal Mononuclear Phagocytes Links Murine to Human Choroidal Neovascularization
Cited by: 20
Author(s): Anja Schlecht, Peipei Zhang, Julian Wolf, Adrian Thien, Dennis-Dominik Rosmus, Stefaniya Boneva, Günther Schlunck, Clemens Lange, Peter Wieghofer
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0195433

Effects of different slipping methods on the mortality of sardine, Sardina pilchardus, after purse-seine capture off the Portuguese Southern coast (Algarve)
Cited by: 16
Author(s): Ana Marçalo, Pedro M. Guerreiro, Luís Bentes, Mafalda Rangel, Pedro Monteiro, Frederico Oliveira, Carlos M.L. Afonso, Pedro Pousão-Ferreira, Hugues P. Benoît, Mike Breen, Karim Erzini, Jorge M. S. Gonçalves
Software Mentions: 1
Published: about 8 years ago

10.1186/s13023-020-01367-y

Natural history of lung function in spinal muscular atrophy
Cited by: 50
Author(s): Camiel A. Wijngaarde, Esther S. Veldhoen, Ruben P A van Eijk, Marloes Stam, Louise Otto, Fay‐Lynn Asselman, Roelie M. Wösten‐van Asperen, Erik H.J. Hulzebos, Laura P. Verweij-van den Oudenrijn, Bart Bartels, Inge Cuppen, Renske I. Wadman, Leonard H. van den Berg, Cornelis K. van der Ent, W. Ludo van der Pol
Software Mentions: 1
Published: over 6 years ago

10.1002/ece3.4663

Thermal tolerance of Mediterranean marine macrophytes: Vulnerability to global warming
Cited by: 50
Author(s): Ioannis Savva, Scott Bennett, Guillem Roca, Gabriel Jordá, Núria Marbà
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pgen.1007512

Discovery of a dual protease mechanism that promotes DNA damage checkpoint recovery
Cited by: 16
Author(s): Peter E. Burby, Zackary W. Simmons, Jeremy W. Schroeder, Lyle A. Simmons
Software Mentions: 1
Published: about 8 years ago

10.1186/s12870-017-1167-3

Genome-wide association mapping of black point reaction in common wheat (Triticum aestivum L.)
Cited by: 79
Author(s): Jindong Liu, Zhonghu He, Awais Rasheed, Weie Wen, Jun Yan, Pingzhi Zhang, Yat-wah Wan, Yong Zhang, Chaojie Xie, Xianchun Xia
Software Mentions: 1
Published: over 8 years ago

10.3390/s20082348

A Simple, Reliable, and Inexpensive Solution for Contact Color Measurement in Small Plant Samples
Cited by: 7
Author(s): Patricia Sanmartín, Michela Gambino, Elsa Fuentes, Miguel Serrano
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0188085

Steps to achieve quantitative measurements of microRNA using two step droplet digital PCR
Cited by: 26
Author(s): Elizabeth Stein, David L. Duewer, Natalia Farkas, Erica L. Romsos, Lili Wang, Kenneth D. Cole
Software Mentions: 1
Published: almost 9 years ago

10.1093/rap/rkaa070

Persistence of biologic treatments in psoriatic arthritis: a population-based study in Sweden
Cited by: 17
Author(s): Kirk Geale, Ingrid Lindberg, Emma Paulsson, E. Christina M. Wennerström, Anna Tjärnlund, W. Noël, Dana Enkusson, Elke Theander
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pgen.1006908

The nucleoid occlusion factor Noc controls DNA replication initiation in Staphylococcus aureus
Cited by: 40
Author(s): Ting Pang, Xindan Wang, Hoong Chuin Lim, Thomas G. Bernhardt, David Z. Rudner
Software Mentions: 1
Published: about 9 years ago

10.7554/eLife.58910

S-phase-independent silencing establishment in Saccharomyces cerevisiae
Cited by: 16
Author(s): Davis Goodnight, Jasper Rine
Software Mentions: 1
Published: about 6 years ago

10.3390/s20123596

Performance Assessment of Thermal Infrared Cameras of Different Resolutions to Estimate Tree Water Status from Two Cherry Cultivars: An Alternative to Midday Stem Water Potential and Stomatal Conductance
Cited by: 15
Author(s): Marcos Carrasco-Benavides, Javiera Antunez-Quilobrán, Antonella Baffico-Hernández, Carlos Ávila-Sánchez, Samuel Ortega-Farías, Sergio Espinoza, John Gajardo, Marco Mora, Sigfredo Fuentes
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2017.00813

T Cell Lymphoma and Leukemia in Severe Combined Immunodeficiency Pigs following Bone Marrow Transplantation: A Case Report
Cited by: 13
Author(s): Ellis J. Powell, Jared H. Graham, N. Matthew Ellinwood, Jesse M. Hostetter, Michael J. Yaeger, Chak Sum Ho, Lynden E. Gault, Veronica Norlin, Elizabeth M. Snella, Jackie K. Jens, Emily H. Waide, Adeline N. Boettcher, Maureen Kerrigan, Raymond R.R. Rowland, Jason W. Ross, Jack C. M. Dekkers, Christopher K. Tuggle
Software Mentions: 1
Published: about 9 years ago

10.3390/s20185339

Accuracy of Solid-State Residential Water Meters under Intermittent Flow Conditions
Cited by: 6
Author(s): Francisco J. Arregui, Laura Pastor-Jabaloyes, Angel V. Mercedes, Francesc J. Gavara
Software Mentions: 1
Published: almost 6 years ago

10.3390/s20236912

Evaluation of Vineyard Cropping Systems Using On-Board RGB-Depth Perception
Cited by: 11
Author(s): Héctor Moreno, Víctor Rueda-Ayala, Ángela Ribeiro, José M. Bengochea-Guevara, Juan López, Gerassimos G. Peteinatos, Jaime del Cerro, Dionisio Andújar
Software Mentions: 1
Published: over 5 years ago

10.1186/s12284-021-00495-8

Genome-Wide Association Study of the Genetic Basis of Effective Tiller Number in Rice
Cited by: 10
Author(s): Mengmeng Ren, Mao Huang, Haiyang Qiu, Yung Chun, Li Lü, Ashmit Kumar, Jingjing Fang, Jinfeng Zhao, Hang He, Xueyong Li
Software Mentions: 1
Published: about 5 years ago

10.1177/2472555217716056

High-Throughput Phenotypic Screening of Kinase Inhibitors to Identify Drug Targets for Polycystic Kidney Disease
Cited by: 35
Author(s): Tijmen H. Booij, Hester Bange, Wouter N. Leonhard, Kuan Yan, Michiel Fokkelman, Steven J. Kunnen, Johannes G. Dauwerse, Yu Qin, Bob van de Water, Gerard J. P. van Westen, Dorien J.M. Peters, Leo Price
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pgen.1008315

Mutations in ARL2BP, a protein required for ciliary microtubule structure, cause syndromic male infertility in humans and mice
Cited by: 18
Author(s): Abigail R. Moye, Nicola Bedoni, Jessica G. Cunningham, Urikhan Sanzhaeva, Eric S. Tucker, Peter H. Mathers, Virginie G. Peter, Mathieu Quinodoz, Liliana P Paris, Luisa Coutinho Santos, Pedro Camacho, Madeleine G. Purcell, Abbie C. Winkelmann, James A. Foster, Elena N. Pugacheva, Carlo Rivolta, Visvanathan Ramamurthy
Software Mentions: 1
Published: about 7 years ago

10.3389/fpsyg.2019.01089

Measuring Distribution Similarities Between Samples: A Distribution-Free Overlapping Index
Cited by: 137
Author(s): Massimiliano Pastore, Antonio Calcagnì
Software Mentions: 1
Published: over 7 years ago

10.1016/j.sjbs.2021.06.079

Construction of miRNA-mRNA network for the identification of key biological markers and their associated pathways in IgA nephropathy by employing the integrated bioinformatics analysis
Cited by: 15
Author(s): Nosheen Fatima, Muhammad Hamzah Saleem, Muhammad Aslam, Ajaz Ahmad, Sidra Aslam
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00408-019-00299-0

Circulating P-Selectin Glycoprotein Ligand 1 and P-Selectin Levels in Obstructive Sleep Apnea Patients
Cited by: 16
Author(s): Péter Horváth, Zsófia Lázár, Gabriella Gálffy, Rita Puskás, László Kunos, G Losonczy, Martina Mészáros, Ádám Domonkos Tárnoki, Dávid László Tárnoki, András Bikov
Software Mentions: 1
Published: over 6 years ago

10.1002/cam4.1064

Elevated glypican-1 expression is associated with an unfavorable prognosis in pancreatic ductal adenocarcinoma
Cited by: 83
Author(s): Haizhen Lu, Fangfei Niu, Fang Liu, Jiajia Gao, Yulin Sun, Xiaohang Zhao
Software Mentions: 1
Published: over 9 years ago

10.1186/s13049-020-00816-8

Why do infants need out-of-hospital emergency medical services? A retrospective, population-based study
Cited by: 2
Author(s): Jelena Oulasvirta, Heini Harve‐Rytsälä, Mitja Lääperi, Markku Kuisma, Heli Salmi
Software Mentions: 1
Published: over 5 years ago

10.1186/s13049-021-00915-0

Prehospital characteristics of COVID-19 patients in Helsinki – experience of the first wave of the pandemic
Cited by: 6
Author(s): Markku Kuisma, Heini Harve‐Rytsälä, Jussi Pirneskoski, James Boyd, Mitja Lääperi, Ari Salo, Tuukka Puolakka
Software Mentions: 1
Published: about 5 years ago

10.1002/cam4.2818

Identify potential clinical significance of long noncoding RNA forkhead box P4 antisense RNA 1 in patients with early stage pancreatic ductal adenocarcinoma
Cited by: 11
Author(s): Xiao‐Guang Liu, Hao Xu, Ming Chen, Xiaoyu Tan, Xiaofeng Chen, Yong‐Guang Yang, Manzhou Lin, Guohua Li, Xiangdang Liang, Yi‐Bin Qian, Guojia Yuan, Min‐Qiang Chen, Wentao Li, Huilai Miao, Mingyi Li, Xiwen Liao, Wei Dai, Nian‐Ping Chen
Software Mentions: 1
Published: over 6 years ago

10.1155/2018/9898654

History of Suicide Attempt Is Associated with Reduced Medial Prefrontal Cortex Activity during Emotional Decision-Making among Men with Schizophrenia: An Exploratory fMRI Study
Cited by: 15
Author(s): Stéphane Potvin, Andràs Tikàsz, Stéphane Richard‐Devantoy, Ovidiu Lungu, Alexandre Dumais
Software Mentions: 1
Published: over 8 years ago

10.3389/fped.2021.691599

Immunotherapies for Anti-N-M-methyl-D-aspartate Receptor Encephalitis: Multicenter Retrospective Pediatric Cohort Study in China
Cited by: 5
Author(s): Shiqi Guang, Jianjun Ma, Xiaotun Ren, Shuizhen Zhou, Jian Yang, Jianzhao Zhang, Xiaoshuang Cao, Linxiu Zhong, Xiao Ding, Xiaosu Wang, Changhong Ren, Weihua Zhang, Linmei Zhang, Min Zhang, Jing Sun, Miriam Kessi, Fei Yin, Jing Peng, Yuwu Jiang
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pgen.1000928

Genome-Wide Association Study of Lp-PLA2 Activity and Mass in the Framingham Heart Study
Cited by: 71
Author(s): Sunil Suchindran, D Rivedal, John R. Guyton, Tom Milledge, Xiaoyi Gao, Ashlee M. Benjamin, Jennifer Rowell, Geoffrey S. Ginsburg, Jeanette McCarthy
Software Mentions: 1
Published: over 16 years ago

10.7554/eLife.66815

Human airway cells prevent SARS-CoV-2 multibasic cleavage site cell culture adaptation
Cited by: 64
Author(s): Mart M. Lamers, Anna Z Mykytyn, Tim I Breugem, Yiquan Wang, Douglas C. Wu, Samra Riesebosch, Petra B. van den Doel, Debby Schipper, Theo M. Bestebroer, Nicholas C. Wu, Bart L. Haagmans
Software Mentions: 1
Published: over 5 years ago

10.3390/cells9051284

In Vitro-Generated Hypertrophic-Like Adipocytes Displaying PPARG Isoforms Unbalance Recapitulate Adipocyte Dysfunctions In Vivo
Cited by: 14
Author(s): Marianna Aprile, Simona Cataldi, Caterina Perfetto, Maria Rosaria Ambrosio, Paola Italiani, Rosarita Taté, Matthias Blüher, Alfredo Ciccodicola, Valerio Costa
Software Mentions: 1
Published: over 6 years ago

10.1534/g3.115.024299

Quantitative Trait Locus and Genetical Genomics Analysis Identifies Putatively Causal Genes for Fecundity and Brooding in the Chicken
Cited by: 13
Author(s): Martin Johnsson, Kenneth B. Jonsson, Leif Andersson, Per Jensen, I. A. Wright
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pgen.1005602

Genomic Insights into the Ancestry and Demographic History of South America
Cited by: 186
Author(s): Julian R. Homburger, Andrés Moreno‐Estrada, Christopher R. Gignoux, Dominic Nelson, Elena Sánchez, Patricia A. Ortiz-Tello, Bernardo A. Pons-Estel, Eduardo Acevedo‐Vásquez, Pedro Miranda, Carl D. Langefeld, Simon Gravel, Marta E. Alarcón‐Riquelme, Carlos D. Bustamante
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0148266

Simvastatin Sodium Salt and Fluvastatin Interact with Human Gap Junction Gamma-3 Protein
Cited by: 3
Author(s): Andrew Marsh, Katherine Casey-Green, Fay Probert, David M. Withall, Daniel A. Mitchell, Suzanne J. Dilly, Sean James, Wade R. Dimitri, Sweta Ladwa, Paul C. Taylor, Donald R. J. Singer
Software Mentions: 1
Published: over 10 years ago

10.1186/s13023-021-01898-y

Non-hotspot PIK3CA mutations are more frequent in CLOVES than in common or combined lymphatic malformations
Cited by: 22
Author(s): Pascal Brouillard, Matthieu J. Schlögel, Nassim Homayun Sepehr, Raphaël Helaers, Angela Queisser, Elodie Fastré, Simon Boutry, Sandra Schmitz, Philippe Clapuyt, Frank Hammer, Anne Dompmartin, Annamaria Weitz-Tuoretmaa, Jussi Laranne, L. Pasquesoone, Catheline Vilain, Laurence M. Boon, Miikka Vikkula
Software Mentions: 1
Published: about 5 years ago

10.1126/sciadv.abg5791

High-resolution dietary reconstruction of victims of the 79 CE Vesuvius eruption at Herculaneum by compound-specific isotope analysis
Cited by: 18
Author(s): Silvia Soncin, Helen M. Talbot, Ricardo Fernandes, Alison Harris, Matthew von Tersch, Harry K. Robson, Jan K. Bakker, Kristine Korzow Richter, Michelle Alexander, Steven P. Ellis, Gill Thompson, Valeria Amoretti, Massimo Osanna, Marina Caso, Francesco Sirano, Luciano Fattore, André Carlo Colonese, Peter Garnsey, Luca Bondioli, Oliver E. Craig
Software Mentions: 1
Published: almost 5 years ago

10.3390/microorganisms6030083

Exploring the Impact of the Biofloc Rearing System and an Oral WSSV Challenge on the Intestinal Bacteriome of Litopenaeus vannamei
Cited by: 38
Author(s): Mariana Rangel Pilotto, André Nicolau Aquime Gonçalves, Felipe N. Vieira, Walter Quadros Seifert, Evelyne Bachère, Rafael Diego Rosa, Luciane Maria Perazzolo
Software Mentions: 1
Published: about 8 years ago

10.3389/fped.2020.587730

Carriage Dynamics of Pneumococcal Serotypes in Naturally Colonized Infants in a Rural African Setting During the First Year of Life
Cited by: 7
Author(s): Chrispin Chaguza, Madikay Senghore, Ebrima Bojang, Stephanie Lo, Chinelo Ebruke, Rebecca A. Gladstone, Peggy-Estelle Tientcheu, Rowan E Bancroft, Archibald Worwui, Ebenezer Foster-Nyarko, Fatima Ceesay, Catherine Okoi, Lesley McGee, Keith P. Klugman, Robert F. Breiman, Michael R. Barer, Richard A. Adegbola, Martín Antonio, Stephen D. Bentley, Brenda Kwambana-Adams
Software Mentions: 1
Published: over 5 years ago

10.3390/cells9102159

Characterization of Hematopoiesis in Sickle Cell Disease by Prospective Isolation of Stem and Progenitor Cells
Cited by: 11
Author(s): Seda S. Tolu, Kai Wang, Zi Yan, Shouping Zhang, Karl Roberts, Andrew Crouch, Gracy Sebastian, Mark Chaitowitz, Eric D. Fornari, Evan M. Schwechter, Joan Uehlinger, Deepa Manwani, Caterina P. Minniti, Eric E. Bouhassira
Software Mentions: 1
Published: almost 6 years ago

10.18632/oncotarget.18032

Transcriptome analysis reveals a role for the endothelial ANP-GC-A signaling in interfering with pre-metastatic niche formation by solid cancers
Cited by: 3
Author(s): Takashi Nojiri, Miki Arai, Yutaka Suzuki, Motofumi Kumazoe, Takeshi Tokudome, Koichi Miura, Jun Hino, Hiroshi Hosoda, Minoru Miyazato, Meinoshin Okumura, Shinpei Kawaoka, Kenji Kangawa
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pgen.1004423

Phenotypic Dissection of Bone Mineral Density Reveals Skeletal Site Specificity and Facilitates the Identification of Novel Loci in the Genetic Regulation of Bone Mass Attainment
Cited by: 126
Author(s): John P. Kemp, Carolina Medina‐Gomez, Karol Estrada, Beaté St Pourcain, Denise H.M. Heppe, Nicole M. Warrington, Ling Oei, Susan M. Ring, Claudia J. Kruithof, Nicholas J. Timpson, Lisa E. Wolber, Sjur Reppe, Kaare M. Gautvik, Elin Grundberg, Bing Ge, Bram C. J. van der Eerden, Jeroen van de Peppel, Matthew A. Hibbs, Cheryl Ackert‐Bicknell, Kwangbom Choi, Daniel L. Koller, Michael J. Econs, Frances Williams, Tatiana Foroud, M. Carola Zillikens, Claes Ohlsson, Albert Hofman, André G. Uitterlinden, George Davey Smith, Vincent W. V. Jaddoe, Jonathan H Tobias, Fernando Rivadeneira, David M. Evans
Software Mentions: 1
Published: about 12 years ago

10.3389/fimmu.2021.600979

Tenascin-C Deficiency Is Associated With Reduced Bacterial Outgrowth During Klebsiella pneumoniae-Evoked Pneumosepsis in Mice
Cited by: 9
Author(s): Mariska T. Meijer, Alex F. de Vos, Brendon P. Scicluna, Joris J T H Roelofs, Cherine Abou-Fayçal, Gertraud Orend, Fabrice Uhel, Tom van der Poll
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.60095

Peripheral natural killer cells in chronic hepatitis B patients display multiple molecular features of T cell exhaustion
Cited by: 15
Author(s): Marie Marotel, Marine Villard, Annabelle Drouillard, Issam Tout, Laurie Besson, Omran Allatif, Marine Pujol, Yamila Rocca, Michelle Ainouze, Guillaume Roblot, Sébastien Viel, Melissa Gomez, V. Loustaud, Sophie Alain, David Durantel, Thierry Walzer, Uzma Hasan, Antoine Marçais
Software Mentions: 1
Published: over 5 years ago

10.1128/mSystems.01292-20

Mycobacteria Tolerate Carbon Monoxide by Remodeling Their Respiratory Chain
Cited by: 5
Author(s): Katherine Bayly, Paul R. F. Cordero, Ashleigh Kropp, Cheng Huang, Ralf B. Schittenhelm, Rhys Grinter, Chris Greening
Software Mentions: 1
Published: about 5 years ago

10.3389/fimmu.2020.608696

Distinguishing Sepsis From Infection by Neutrophil Dysfunction: A Promising Role of CXCR2 Surface Level
Cited by: 14
Author(s): Chutima Seree-aphinan, Polathep Vichitkunakorn, Raphatphorn Navakanitworakul, Bodin Khwannimit
Software Mentions: 1
Published: over 5 years ago

10.1016/j.esxm.2020.100315

Male Circumcision Due to Phimosis as the Procedure That Is Not Only Relieving Clinical Symptoms of Phimosis But Also Improves the Quality of Sexual Life
Cited by: 13
Author(s): Mateusz Czajkowski, Katarzyna Czajkowska, Karolina Zarańska, Alicja Giemza, Jakub Kłącz, Małgorzata Sokołowska‐Wojdyło, Marcin Matuszewski
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.5315

Touch-screen-guided task reveals a prosocial choice tendency by chimpanzees (Pan troglodytes)
Cited by: 4
Author(s): Renata S. Mendonça, Christoph D. Dahl, Susana Carvalho, Tetsuro Matsuzawa, Ikuma Adachi
Software Mentions: 1
Published: about 8 years ago

10.1002/cam4.1971

Activation of PTGS2 /NF‐κB signaling pathway enhances radiation resistance of glioma
Cited by: 22
Author(s): Cheng Tan, Liang Liu, Xiaoyang Liu, Ling Qi, Weiyao Wang, Guifang Zhao, Li-Bo Wang, Yimeng Dai
Software Mentions: 1
Published: over 7 years ago

10.1038/s41597-020-00623-x

A relational database to identify differentially expressed genes in the endometrium and endometriosis lesions
Cited by: 23
Author(s): Michael Gabriel, Vidal Fey, Taija Heinosalo, Prem Raj Adhikari, Kalle T. Rytkönen, Tuomo Komulainen, Kaisa Huhtinen, Teemu D. Laajala, Harri Siitari, Arho Virkki, Pia Suvitie, Harry Kujari, Tero Aittokallio, Antti Perheentupa, Matti Poutanen
Software Mentions: 1
Published: almost 6 years ago

10.3389/fvets.2021.709850

Does Vaterite Otolith Deformation Affect Post-Release Survival and Predation Susceptibility of Hatchery-Reared Juvenile Atlantic Salmon?
Cited by: 3
Author(s): Aurélien Delaval, Martine Røysted Solås, Helge Skoglund, Anne Gro Vea Salvanes
Software Mentions: 1
Published: almost 5 years ago

10.7717/peerj.11608

Scaling the effects of ocean acidification on coral growth and coral–coral competition on coral community recovery
Cited by: 4
Author(s): Nicolas R. Evensen, Yves‐Marie Bozec, Peter J. Edmunds, Peter J. Mumby
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2021.652466

And Then There Were Three…: Extreme Regeneration Ability of the Solitary Chordate Polycarpa mytiligera
Cited by: 14
Author(s): Tal Gordon, Arnav Kumar Upadhyay, Lucia Manni, Dorothée Huchon, Noa Shenkar
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0069202

Genome-Wide Association Mapping for Identification of Quantitative Trait Loci for Rectal Temperature during Heat Stress in Holstein Cattle
Cited by: 86
Author(s): Serdal Dikmen, J.B. Cole, D.J. Null, Peter J. Hansen
Software Mentions: 1
Published: about 13 years ago

10.1534/g3.118.200415

Genomic Selection in Preliminary Yield Trials in a Winter Wheat Breeding Program
Cited by: 64
Author(s): Vikas Belamkar, Mary J. Guttieri, Waseem Hussain, Diego Jarquín, Ibrahim S. Elbasyoni, Jesse Poland, Aaron J. Lorenz, P. S. Baenziger
Software Mentions: 1
Published: about 8 years ago

10.3389/fvets.2020.622495

Age Dependence of Antimicrobial Resistance Among Fecal Bacteria in Animals: A Scoping Review
Cited by: 14
Author(s): Tara Gaire, H. M. Scott, Laura Sellers, T. G. Nagaraja, Victoriya V. Volkova
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.118.200376

A Missense Mutation in the Vacuolar Protein Sorting 11 (VPS11) Gene Is Associated with Neuroaxonal Dystrophy in Rottweiler Dogs
Cited by: 15
Author(s): Katherine L Lucot, Peter J. Dickinson, Carrie J. Finno, Tamer Mansour, Anna Letko, Katie M. Minor, James R. Mickelson, Cord Drögemüller, C. Titus Brown, Danika L. Bannasch
Software Mentions: 1
Published: about 8 years ago

10.3390/cells10082081

Ewing Sarcoma-Derived Extracellular Vesicles Impair Dendritic Cell Maturation and Function
Cited by: 13
Author(s): Hendrik Gassmann, Kira Schneider, Valentina Evdokimova, Peter Ruzanov, Sebastian Johannes Schober, Busheng Xue, Kristina von Heyking, Melanie Thiede, G. Richter, Michael W. Pfaffl, Elfriede Noeßner, Lincoln Stein, Poul H. Sorensen, Stefan Burdach, Uwe Thiel
Software Mentions: 1
Published: about 5 years ago

10.1038/srep01801

Quantifying Wikipedia Usage Patterns Before Stock Market Moves
Cited by: 234
Author(s): Helen Susannah Moat, Chester Curme, Adam Avakian, Dror Y. Kenett, H. Eugene Stanley, Tobias Preis
Software Mentions: 1
Published: over 13 years ago

10.3389/fpsyg.2018.01692

Articulation and Dynamics Influence the Perceptual Attack Time of Saxophone Sounds
Cited by: 4
Author(s): Toni Bechtold, Olivier Senn
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0209431

Evaluating the bio-economic performance of a Callo de hacha (Atrina maura, Atrina tuberculosa & Pinna rugosa) fishery restoration plan in La Paz, Mexico
Cited by: 4
Author(s): Juliano Palacios‐Abrantes, Juliana Herrera-Correal, Salvador Estrada, Jacy Brunkow, Renato Molina
Software Mentions: 1
Published: over 7 years ago

10.1038/srep10265

The anatomy of urban social networks and its implications in the searchability problem
Cited by: 34
Author(s): Carlos Herrera-Yagüe, Christian Schneider, Thomas Couronné, Zbigniew Smoreda, R. M. Benito, Pedro J. Zufiria, Marta C. González
Software Mentions: 1
Published: about 11 years ago

10.18632/oncotarget.19926

Mitochondrial genome variation and prostate cancer: a review of the mutational landscape and application to clinical management
Cited by: 25
Author(s): Anton M.F. Kalsbeek, Eva Chan, Niall M. Corcoran, Christopher M. Hovens, Vanessa M. Hayes
Software Mentions: 1
Published: about 9 years ago

10.3390/microorganisms8081141

Microbiota Changes Due to Grape Seed Extract Diet Improved Intestinal Homeostasis and Decreased Fatness in Parental Broiler Hens
Cited by: 4
Author(s): Jérémy Grandhaye, Véronique Douard, Ana Rodriguez-Mateos, Yifan Xu, Alex Cheok, Antonella Riva, Rodrigo Guabiraba, Olivier Zemb, Catherine Philippe, Magali Monnoye, Christophe Staub, Éric Venturi, Alix Barbe, Christelle Ramé, Joëlle Dupont, Pascal Froment
Software Mentions: 1
Published: about 6 years ago

10.1186/s12870-017-1051-1

Brief temperature stress during reproductive stages alters meiotic recombination and somatic mutation rates in the progeny of Arabidopsis
Cited by: 21
Author(s): Ramswaroop Saini, Amit Kumar Singh, Shanmuhapreya Dhanapal, Thoufeequl Hakeem Saeed, Geoffrey J. Hyde, Ramamurthy Baskar
Software Mentions: 1
Published: about 9 years ago

10.1128/JVI.00682-20

Isolation and Characterization of the First Freshwater Cyanophage Infecting Pseudanabaena
Cited by: 21
Author(s): Dong Zhang, Fang You, Yiliang He, Shu Harn Te, Karina Yew‐Hoong Gin
Software Mentions: 1
Published: about 6 years ago

10.3389/fvets.2021.687084

Thermal Performance Curves of Multiple Isolates of Batrachochytrium dendrobatidis, a Lethal Pathogen of Amphibians
Cited by: 6
Author(s): Ciara Sheets, Deena Schmidt, Paul J. Hurtado, Allison Q. Byrne, Erica Bree Rosenblum, Corinne L. Richards‐Zawacki, Jamie Voyles
Software Mentions: 1
Published: about 5 years ago

10.1186/s13395-018-0179-5

HIF prolyl hydroxylase inhibition protects skeletal muscle from eccentric contraction-induced injury
Cited by: 14
Author(s): Andrew N. Billin, Samuel E. Honeycutt, Alan V. McDougal, Jaclyn P. Kerr, Zhe Chen, Johannes M. Freudenberg, Deepak K. Rajpal, G.H. Luo, Henning F. Kramer, Robert S. Geske, Frank Fang, Bert Yao, Richard V. Clark, John J. Lepore, Alex Cobitz, Ram R. Miller, Kazunori Nosaka, Aaron C. Hinken, Alan J. Russell
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31047-8

Analyses of ovarian activity reveal repeated evolution of post-reproductive lifespans in toothed whales
Cited by: 58
Author(s): Stephen Ellis, Daniel W. Franks, Stuart Nattrass, Thomas E. Currie, Michael A. Cant, D. K. Giles, Kenneth C. Balcomb, Darren P. Croft
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2020.578115

Transcriptome Profiling Provides Insights Into Potential Antagonistic Mechanisms Involved in Chaetomium globosum Against Bipolaris sorokiniana
Cited by: 16
Author(s): K Darshan, Rashmi Aggarwal, Bishnu Maya Bashyal, Jagmohan Singh, V. Shanmugam, Malkhan Singh Gurjar, Amolkumar U. Solanke
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-31043-y

Scenario analysis of ecosystem service changes and interactions in a mountain-oasis-desert system: a case study in Altay Prefecture, China
Cited by: 46
Author(s): Qi Fu, Ying Hou, Bo Wang, Xu Bi, Bo Li, Xinshi Zhang
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-018-31085-2

Analysis By Deep Sequencing of Discontinued Neurotropic Yellow Fever Vaccine Strains
Cited by: 17
Author(s): Andrew S. Beck, Thomas G. Wood, Steven G. Widen, Jill C. Thompson, Alan D.T. Barrett
Software Mentions: 1
Published: almost 8 years ago

10.3389/fphar.2020.601344

Largely Accelerated Arterial Aging in Rheumatoid Arthritis Is Associated With Inflammatory Activity and Smoking in the Early Stage of the Disease
Cited by: 9
Author(s): Nikolett Mong, Z Tarjanyi, László Tóthfalusi, Andrea Bartykowszki, Anikó Ilona Nagy, Anett Szekely, Dávid Becker, Pál Maurovich-Horvat, Béla Merkely, György Nagy
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0221689

Reference values for psychoacoustic tests on Polish school children 7–10 years old
Cited by: 5
Author(s): Elżbieta Włodarczyk, Agata Szkiełkowska, Henryk Skarżyńśki, Beata Miaśkiewicz, Henryk Skarżyńśki
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-31950-0

Natural variation among Arabidopsis thaliana accessions in tolerance to high magnesium supply
Cited by: 15
Author(s): Yaofang Niu, Ping Chen, Yu Zhang, Zhongwei Wang, Shikai Hu, Gulei Jin, Caixian Tang, Longbiao Guo
Software Mentions: 1
Published: almost 8 years ago

10.1186/s13395-019-0191-4

Late-onset megaconial myopathy in mice lacking group I Paks
Cited by: 12
Author(s): Giselle A. Joseph, Margaret Hung, Aviva Goel, Mingi Hong, Marysia-Kolbe Rieder, Noam D. Beckmann, Madhavika N. Serasinghe, Jerry E. Chipuk, Parvathi Madhavi Devarakonda, David J. Goldhamer, Paulina Aldana-Hernández, Jonathan M. Curtis, René L. Jacobs, Robert M. Krauss
Software Mentions: 1
Published: over 7 years ago

10.3390/foods9101418

Screening of Antifungal and Antibacterial Activity of 90 Commercial Essential Oils against 10 Pathogens of Agronomical Importance
Cited by: 24
Author(s): Caroline De Clerck, Simon Dal Maso, Olivier Parisi, Frédéric Dresen, Abdesselam Zhiri, M. Haïssam Jijakli
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.celrep.2017.09.092

Fumarate Hydratase Loss Causes Combined Respiratory Chain Defects
Cited by: 59
Author(s): Petros A. Tyrakis, Marie E. Yurkovich, Marco Sciacovelli, Evangelia K. Papachristou, Hannah R. Bridges, Edoardo Gaude, A. Schreiner, Clive S. D’Santos, Judy Hirst, Juan R. Hernández-Fernaud, Roger Springett, John R. Griffiths, Christian Frezza
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.12052

A new threat to local marine biodiversity: filamentous mats proliferating at mesophotic depths off Rapa Nui
Cited by: 4
Author(s): Javier Sellanes, Matthias Gorny, German Zapata‐Hernández, Gonzalo Álvarez, Práxedes Muñoz, Fadia Tala
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-018-32338-w

Green microalgae in marine coastal waters: The Ocean Sampling Day (OSD) dataset
Cited by: 70
Author(s): Margot Tragin, Daniel Vaulot
Software Mentions: 1
Published: almost 8 years ago

10.1515/biol-2020-0077

In silico identification of Capsicum type III polyketide synthase genes and expression patterns in Capsicum annuum
Cited by: 2
Author(s): Delong Kan, Di Zhao, Pengfei Duan
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12979-016-0082-z

Frailty has a stronger association with inflammation than age in older veterans
Cited by: 77
Author(s): Puja Van Epps, Douglas M. Oswald, Patricia A. Higgins, Thomas Hornick, Htin Aung, Richard Banks, Brigid Wilson, Chris Burant, Stefan Gravenstein, David H. Canaday
Software Mentions: 1
Published: almost 10 years ago

10.3389/fvets.2017.00200

Shiga Toxin-Producing Escherichia coli O157 Shedding Dynamics in an Australian Beef Herd
Cited by: 4
Author(s): Christina A. Ahlstrom, Petra Muellner, Geraldine Lammers, Meghan E. Jones, Sophie Octavia, Ruiting Lan, Jane Heller
Software Mentions: 1
Published: over 8 years ago

10.1093/scan/nsaa081

Newborn white matter microstructure moderates the association between maternal postpartum depressive symptoms and infant negative reactivity
Cited by: 15
Author(s): Saara Nolvi, Jetro J. Tuulari, Tuomas I. Lavonius, Noora M. Scheinin, Satu J. Lehtola, Maria Lavonius, Harri Merisaari, Jani Saunavaara, Riikka Korja, Eeva‐Leena Kataja, Juho Pelto, Riitta Parkkola, Lena Karlsson, Hasse Karlsson
Software Mentions: 1
Published: about 6 years ago

10.3791/56637

Resurrection of Dormant Daphnia magna: Protocol and Applications
Cited by: 8
Author(s): Maria Cuenca Cambronero, Luisa Orsini
Software Mentions: 1
Published: over 8 years ago

10.3389/fmed.2021.663396

HLA Variants and Inhibitor Development in Hemophilia A: A Retrospective Case-Controlled Study Using the ATHNdataset
Cited by: 4
Author(s): Joseph R. McGill, Vijaya L. Simhadri, Zuben E. Sauna
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-32693-8

Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage
Cited by: 52
Author(s): Katarzyna Bachanek‐Bankowska, Antonello Di Nardo, Jemma Wadsworth, Valérie Mioulet, Giulia Pezzoni, Santina Grazioli, Emiliana Brocchi, Sharmila Chapagain Kafle, Ranjani Hettiarachchi, Pradeep Lakpriya Kumarawadu, Ibrahim Eldaghayes, Abdunaser Dayhum, Deodass Meenowa, Soufien Sghaier, Hafsa Madani, Nabil Abouchoaib, Bui H. Hoang, Pham P. Vu, Kinzang Dukpa, Ratna B. Gurung, Sangay Tenzin, Ulrich Wernery, Alongkorn Panthumart, Kingkarn Boonsuya Seeyo, Wilai Linchongsubongkoch, Anthony Relmy, Labib Bakkali‐Kassimi, A. V. Scherbakov, Donald P. King, Nick J. Knowles
Software Mentions: 1
Published: almost 8 years ago

10.1002/ece3.7003

Natural history of model organisms: The secret (group) life of Drosophila melanogaster larvae and why it matters to developmental ecology
Cited by: 17
Author(s): Juliano Morimoto, Zuzanna Pietras
Software Mentions: 1
Published: almost 6 years ago

10.3390/microorganisms4010005

Metagenomic Analyses Reveal That Energy Transfer Gene Abundances Can Predict the Syntrophic Potential of Environmental Microbial Communities
Cited by: 12
Author(s): Lisa Oberding, Lisa M. Gieg
Software Mentions: 1
Published: over 10 years ago

10.1002/ece3.5237

Genetic diversity, admixture, and hatchery influence in Brook Trout (Salvelinus fontinalis) throughout western New York State
Cited by: 14
Author(s): Stephanie Dowell Beer, Scott Cornett, Peter Austerman, Betsy Trometer, Thomas Hoffman, Meredith L. Bartron
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-33357-3

Placental FKBP51 mediates a link between second trimester maternal anxiety and birthweight in female infants
Cited by: 10
Author(s): Katie L. Togher, Gerard W. O’Keeffe, Ali S. Khashan, Gerard Clarke, Louise C. Kenny
Software Mentions: 1
Published: almost 8 years ago

10.1080/19336950.2021.1965422

A pan-cancer analysis revealed the role of the SLC16 family in cancer
Cited by: 16
Author(s): Jun Li, Jiaheng Xie, Dan Wu, Liang Chen, Zixuan Gong, Rui Wu, Y. Hu, Jiangning Zhao, Yetao Xu
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-33525-5

E-cadherin loss induces targetable autocrine activation of growth factor signalling in lobular breast cancer
Cited by: 53
Author(s): K.L. Teo, Laura Gómez-Cuadrado, Milou Tenhagen, Adam Byron, Max A K Rätze, Miranda van Amersfoort, Jojanneke Renes, Eric Strengman, Amit Mandoli, Abhishek A. Singh, Joost H.A. Martens, Hendrik G. Stunnenberg, Paul J. van Diest, Valerie G. Brunton, Patrick W.B. Derksen
Software Mentions: 1
Published: almost 8 years ago

10.3389/fphar.2020.00620

Software Tools for Model-Informed Precision Dosing: How Well Do They Satisfy the Needs?
Cited by: 58
Author(s): Wannee Kantasiripitak, Ruth Van Daele, Matthias Gijsen, Marc Ferrante, Isabel Spriet, Erwin Dreesen
Software Mentions: 1
Published: over 6 years ago

Projects: cran: ggplot2

Enhanced Analysis

Science Score: 100/100

Bonuses:

Papers Mentioning ggplot2 11,441