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Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: over 2 years ago
4,921 dependent packages
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Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu
Repository Activity:
Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses
  • +520 Educational commit emails
    26 contributors with educational email addresses
  • +18 Science terms in README
    9 scientific terms found in README
Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.3389/fpls.2020.00239
Root Skewing-Associated Genes Impact the Spaceflight Response of Arabidopsis thaliana
Cited by: 25
Author(s): Brandon Califar, Natasha Sng, Agata K. Zupanska, Anna‐Lisa Paul, Robert J. Ferl
Software Mentions: 1
Published: over 6 years ago
10.1016/j.jacc.2018.09.073
His Resynchronization Versus Biventricular Pacing in Patients With Heart Failure and Left Bundle Branch Block
Cited by: 167
Author(s): Ahran Arnold, Matthew Shun-Shin, Daniel Keene, James P. Howard, S.M. Afzal Sohaib, Ian Wright, Graham D. Cole, Norman Qureshi, David Lefroy, Michael Koa‐Wing, Nick Linton, Phang Boon Lim, Nicholas S. Peters, D. Wyn Davies, Amal Muthumala, Mark Tanner, Kenneth A. Ellenbogen, Prapa Kanagaratnam, Dárrel P. Francis, Zachary I. Whinnett
Software Mentions: 1
Published: over 7 years ago
10.3389/fpls.2020.609600
Regulation of Exocyst Function in Pollen Tube Growth by Phosphorylation of Exocyst Subunit EXO70C2
Cited by: 4
Author(s): Antonietta Saccomanno, Martin Potocký, Přemysl Pejchar, Michal Hála, Hiromasa Shikata, Claus Schwechheimer, Viktor Žárský
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.4663
Thermal tolerance of Mediterranean marine macrophytes: Vulnerability to global warming
Cited by: 50
Author(s): Ioannis Savva, Scott Bennett, Guillem Roca, Gabriel Jordá, Núria Marbà
Software Mentions: 1
Published: over 7 years ago
10.3390/v13040536
Dengue Virus Infection and Associated Risk Factors in Africa: A Systematic Review and Meta-Analysis
Cited by: 23
Author(s): Gaspary O. Mwanyika, Leonard E. G. Mboera, Sima Rugarabamu, Baraka Laurian Ngingo, Calvin Sindato, Julius J. Lutwama, Janusz T. Pawęska, Gerald Misinzo
Software Mentions: 1
Published: about 5 years ago
10.3233/JAD-190132
Low Serum High-Density Lipoprotein Cholesterol Levels Associate with the C9orf72 Repeat Expansion in Frontotemporal Lobar Degeneration Patients
Cited by: 13
Author(s): Olli Jääskeläinen, Eino Solje, Anette Hall, Kasper Katisko, Ville Korhonen, Mika Tiainen, Antti J. Kangas, Seppo Helisalmi, Maria Pikkarainen, Anne M. Koivisto, Päivi Hartikainen, Mikko Hiltunen, Mika Ala‐Korpela, Hilkka Soininen, Pasi Soininen, Annakaisa Haapasalo, Anne M. Remes, Sanna‐Kaisa Herukka
Software Mentions: 1
Published: over 6 years ago
10.1038/s41396-019-0445-5
Pyrethroid exposure alters internal and cuticle surface bacterial communities in Anopheles albimanus
Cited by: 39
Author(s): Nsa Dada, Juan C. Lol, Ana Cristina Benedict, Francisco López, Mili Sheth, Nicole Dzuris, Norma Padilla, Audrey Lenhart
Software Mentions: 1
Published: almost 7 years ago
10.1021/acs.jafc.0c06279
Xylooligosaccharides Increase <i>Bifidobacteria</i> and <i>Lachnospiraceae</i> in Mice on a High-Fat Diet, with a Concomitant Increase in Short-Chain Fatty Acids, Especially Butyric Acid
Cited by: 40
Author(s): Karin Berger, Stephen Burleigh, Maria Lindahl, Abhishek Bhattacharya, Prachiti Patil, Henrik Stålbrand, Eva Nordberg Karlsson, Frida Fåk Hållenius, Margareta Nyman, Patrick Adlercreutz
Software Mentions: 1
Published: about 5 years ago
10.1002/evl3.112
Response to Perrier and Charmantier: On the importance of time scales when studying adaptive evolution
Cited by: 1
Author(s): Mirte Bosse, Lewis G. Spurgin, Veronika N. Laine, Ella F. Cole, Josh A. Firth, Phillip Gienapp, Andrew Gosler, Keith McMahon, Jocelyn Poissant, Irene Verhagen, M.A.M. Groenen, Kees van Oers, Ben C. Sheldon, Marcel E. Visser, Jon Slate
Software Mentions: 1
Published: about 7 years ago
10.1155/2021/3495360
Network Pharmacology-Based Investigation of the Therapeutic Mechanisms of Action of Danning Tablets in Nonalcoholic Fatty Liver Disease
Cited by: 6
Author(s): Tong Lin, Li Li, Caijun Liang, Lisheng Peng
Software Mentions: 1
Published: about 5 years ago
10.12688/f1000research.22338.2
The deep(er) roots of Eukaryotes and Akaryotes
Cited by: 2
Author(s): Ajith Harish, David A. Morrison
Software Mentions: 1
Published: almost 6 years ago
10.1172/jci.insight.147474
The effect of low-dose IL-2 and Treg adoptive cell therapy in patients with type 1 diabetes
Cited by: 76
Author(s): Shen Dong, Kamir J Hiam-Galvez, Cody T. Mowery, Kevan C. Herold, Stephen E. Gitelman, Jonathan H. Esensten, Weihong Liu, Angela Lares, Ashley S. Leinbach, Michael Lee, Vinh Nguyen, Stanley Tamaki, Whitney Tamaki, Courtney M. Tamaki, Morvarid Mehdizadeh, Amy Putnam, Matthew H. Spitzer, Chun Jimmie Ye, Qizhi Tang, Jeffrey A. Bluestone
Software Mentions: 1
Published: over 4 years ago
10.3390/cancers13020275
Role of Omentin in Obesity Paradox in Lung Cancer
Cited by: 8
Author(s): S.C. Parida, Sumit Siddharth, Dipali Sharma
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.6555
Evolution and maintenance of microbe‐mediated protection under occasional pathogen infection
Cited by: 4
Author(s): Anke Kloock, Michael B. Bonsall, Kayla C. King
Software Mentions: 1
Published: almost 6 years ago
10.3390/cancers13184625
Targeting OLFML3 in Colorectal Cancer Suppresses Tumor Growth and Angiogenesis, and Increases the Efficacy of Anti-PD1 Based Immunotherapy
Cited by: 8
Author(s): Jimmy Stalin, Beat A. Imhof, Oriana Coquoz, Rachel Jeitziner, Pascal Hammel, Thomas Alexander Mckee, Stéphane Jemelin, Marine Poittevin, Marc Pocard, Thomas Matthes, Rachid Kaci, Mauro Delorenzi, Curzio Rüegg, Marijana Miljkovic‐Licina
Software Mentions: 1
Published: over 4 years ago
10.3390/v13010114
Studies on the Efficacy, Potential Cardiotoxicity and Monkey Pharmacokinetics of GLP-26 as a Potent Hepatitis B Virus Capsid Assembly Modulator
Cited by: 13
Author(s): Selwyn J. Hurwitz, Noreen McBrearty, Alla Arzumanyan, Eugene Bichenkov, Sijia Tao, Leda Bassit, Zhe Chen, James J. Kohler, Franck Amblard, Mark A. Feitelson, Raymond F. Schinazi
Software Mentions: 1
Published: over 5 years ago
10.3389/fpls.2020.00601
Soil Sickness in Aged Tea Plantation Is Associated With a Shift in Microbial Communities as a Result of Plant Polyphenol Accumulation in the Tea Gardens
Cited by: 47
Author(s): Yasir Arafat, Israr Ud Din, Muhammad Tayyab, Yuhang Jiang, Ting Cui, Zhaoying Cai, Hao Zhao, Xiangmin Lin, Wenxiong Lin, Shan Lin
Software Mentions: 1
Published: about 6 years ago
10.7554/eLife.58349
Expandable and reversible copy number amplification drives rapid adaptation to antifungal drugs
Cited by: 70
Author(s): Robert T. Todd, Anna Selmecki
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13227-016-0040-z
Developmental basis of phenotypic integration in two Lake Malawi cichlids
Cited by: 31
Author(s): Pierre Le Pabic, W. James Cooper, Thomas F. Schilling
Software Mentions: 1
Published: over 10 years ago
10.3390/v12111343
High-Throughput Method for Detection of Arbovirus Infection of Saliva in Mosquitoes Aedes aegypti and Ae. albopictus
Cited by: 4
Author(s): Nildimar Alves Honório, Daniel Cardoso Portela Câmara, Keenan Wiggins, Bradley Eastmond, Barry W. Alto
Software Mentions: 1
Published: over 5 years ago
10.3390/cancers12082045
Early Change in the Plasma Levels of Circulating Soluble Immune Checkpoint Proteins in Patients with Unresectable Hepatocellular Carcinoma Treated by Lenvatinib or Transcatheter Arterial Chemoembolization
Cited by: 10
Author(s): Naoshi Odagiri, Hai Hoang, Lê Thị Thanh Thủy, Minh Phuong Dong, Maito Suoh, Kohei Kotani, Atsushi Hagihara, Sawako Uchida‐Kobayashi, Masaru Enomoto, Norifumi Kawada
Software Mentions: 1
Published: almost 6 years ago
10.3390/cancers11091353
CYP2D6 Genotype Predicts Plasma Concentrations of Tamoxifen Metabolites in Ethiopian Breast Cancer Patients
Cited by: 13
Author(s): Jemal Hussien Ahmed, Eyasu Makonnen, Alan Fotoohi, Abraham Aseffa, Rawleigh Howe, Eleni Aklillu
Software Mentions: 1
Published: over 6 years ago
10.1002/ece3.1291
Alate susceptibility in ants
Cited by: 2
Author(s): Eddie K. H. Ho, Megan E. Frederickson
Software Mentions: 1
Published: over 11 years ago
10.1002/ece3.5444
Nonconsumptive predator effects modify crayfish‐induced bioturbation as mediated by limb loss: Field and mesocosm experiments
Cited by: 4
Author(s): Luc A. Dunoyer, Dakota Coomes, Philip H. Crowley
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2021.716523
Evaluation of the Antibacterial Activity of Crude Extracts Obtained From Cultivation of Native Endophytic Fungi Belonging to a Tropical Montane Rainforest in Colombia
Cited by: 11
Author(s): Esteban Charria-Girón, María C. Espinosa, Andrea Zapata-Montoya, María José Soto Méndéz, Juan P. Caicedo, Andrés F. Dávalos, Beatriz E. Ferro, Aída M. Vasco-Palacios, Nelson Caicedo
Software Mentions: 1
Published: over 4 years ago
10.1172/jci.insight.136533
Humoral immune responses mediate the development of a restrictive phenotype of chronic lung allograft dysfunction
Cited by: 13
Author(s): Keizo Misumi, David Wheeler, Yoshiro Aoki, M.P. Combs, Russell R. Braeuer, Ryuji Higashikubo, Wenjun Li, Daniel Kreisel, Ragini Vittal, Jeffrey L. Myers, Amir Lagstein, Neff Walker, Carol Farver, Vibha N. Lama
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.7497
Relaxation of putative plant defenses in a tropical agroecosystem
Cited by: 0
Author(s): Lauren N. Carley, Susan G. Letcher
Software Mentions: 1
Published: about 5 years ago
10.3390/v12090950
Molecular Characterization of Hovenia Dulcis-Associated Virus 1 (HDaV1) and 2 (HDaV2): New Tentative Species within the Order Picornavirales
Cited by: 4
Author(s): Flávia Milene Barros Nery, Fernando Lucas Melo, L. S. Boiteux, S. G. Ribeiro, Renato O. Resende, Anelise F. Orílio, J. G. Batista, M. F. Lima, R. C. Pereira–Carvalho
Software Mentions: 1
Published: almost 6 years ago
10.1038/ismej.2017.88
Nitrogen cost minimization is promoted by structural changes in the transcriptome of N-deprived Prochlorococcus cells
Cited by: 25
Author(s): Robert W. Read, Paul M. Berube, Steven J. Biller, Iva Neveux, Andrés Cubillos-Ruiz, Sallie W. Chisholm, Joseph J. Grzymski
Software Mentions: 1
Published: almost 9 years ago
10.1264/jsme2.ME20152
RNA Viral Metagenome Analysis of Subnanogram dsRNA Using Fragmented and Primer Ligated dsRNA Sequencing (FLDS)
Cited by: 12
Author(s): Miho Hirai, Yoshihiro Takaki, Fumie Kondo, Masayuki Horie, Syun-ichi Urayama, Takuro Nunoura
Software Mentions: 1
Published: over 5 years ago
10.3389/fpls.2020.00387
Water Stable Isotopes in Ecohydrological Field Research: Comparison Between In Situ and Destructive Monitoring Methods to Determine Soil Water Isotopic Signatures
Cited by: 22
Author(s): Angelika Kübert, Sinikka Paulus, Adrian Dahlmann, Christiane Werner, Youri Rothfuss, Natalie Orlowski, Maren Dubbert
Software Mentions: 1
Published: about 6 years ago
10.3390/v12091042
Divergent Influenza-Like Viruses of Amphibians and Fish Support an Ancient Evolutionary Association
Cited by: 20
Author(s): Rhys Parry, Michelle Wille, Olivia M. H. Turnbull, Jemma L. Geoghegan, Edward C. Holmes
Software Mentions: 1
Published: over 5 years ago
10.1186/s13073-018-0542-5
Simple paired heavy- and light-chain antibody repertoire sequencing using endoplasmic reticulum microsomes
Cited by: 10
Author(s): Praneeth Reddy Devulapally, Jörg Bürger, Thorsten Mielke, Zoltán Konthur, Hans Lehrach, Marie–Laure Yaspo, Jörn Glökler, Hans-Jörg Warnatz
Software Mentions: 1
Published: about 8 years ago
10.3390/cancers12082000
Discovery of Prognostic Markers for Early-Stage High-Grade Serous Ovarian Cancer by Maldi-Imaging
Cited by: 11
Author(s): Hagen Kulbe, Oliver Klein, Zhiyang Wu, Eliane Tabea Taube, Wanja Kassuhn, David Horst, Silvia Darb‐Esfahani, Paul Jank, Salem Abobaker, Frauke Ringel, Andreas du Bois, Florian Heitz, Jalid Sehouli, Elena Ioana Braicu
Software Mentions: 1
Published: almost 6 years ago
10.3390/cancers13061327
Integrated Metabolomics and Transcriptomics Analysis of Monolayer and Neurospheres from Established Glioblastoma Cell Lines
Cited by: 6
Author(s): Joana Peixoto, Sudha Janaki‐Raman, Lisa Schlicker, W. Schmitz, Susanne Walz, Alina M Winkelkotte, Christel Herold‐Mende, Paula Soares, Almut Schulze, Jorge Lima
Software Mentions: 1
Published: about 5 years ago
10.1038/s41396-018-0325-4
Nitric oxide production and antioxidant function during viral infection of the coccolithophore Emiliania huxleyi
Cited by: 19
Author(s): Brittany Schieler, Megha V. Soni, Christopher M. Brown, Marco J. L. Coolen, Helen F. Fredricks, Benjamin A. S. Van Mooy, Donald J. Hirsh, Kay D. Bidle
Software Mentions: 1
Published: over 7 years ago
10.12688/f1000research.17652.1
Effects of sub-lethal concentrations of copper ammonium acetate, pyrethrins and atrazine on the response of Escherichia coli to antibiotics
Cited by: 7
Author(s): Hyunwoo Jun, Brigitta Kurenbach, Jack Aitken, Alibe Wasa, Mitja N. P. Remus-Emsermann, William Godsoe, Jack A. Heinemann
Software Mentions: 1
Published: over 7 years ago
10.1093/gbe/evaa270
Long-Read Genome Assemblies Reveal Extraordinary Variation in the Number and Structure of MHC Loci in Birds
Cited by: 37
Author(s): Ke He, Piotr Minias, Peter O. Dunn
Software Mentions: 1
Published: over 5 years ago
10.1093/gbe/evaa203
The Genetic Architecture of Emerging Fungicide Resistance in Populations of a Global Wheat Pathogen
Cited by: 23
Author(s): Daniel Pereira, Bruce A. McDonald, Daniel Croll
Software Mentions: 1
Published: over 5 years ago
10.3389/fpls.2021.696229
Chromosome Level Assembly of Homozygous Inbred Line ‘Wongyo 3115’ Facilitates the Construction of a High-Density Linkage Map and Identification of QTLs Associated With Fruit Firmness in Octoploid Strawberry (Fragaria × ananassa)
Cited by: 10
Author(s): Hye-Eun Lee, Abinaya Manivannan, Sun Yi Lee, Koeun Han, Jun-Geol Yeum, Jinkwan Jo, Jinhee Kim, Il Rae Rho, Ye Rin Lee, Eun Su Lee, Byoung‐Cheorl Kang, Do-Sun Kim
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12966-020-00944-5
Recent changes in the Dutch foodscape: socioeconomic and urban-rural differences
Cited by: 33
Author(s): Maria Gabriela Matias de Pinho, Joreintje D. Mackenbach, Nicolette R. den Braver, Joline W.J. Beulens, Johannes Brug, Jeroen Lakerveld
Software Mentions: 1
Published: about 6 years ago
10.1093/gbe/evaa064
piRNA Clusters Need a Minimum Size to Control Transposable Element Invasions
Cited by: 19
Author(s): Robert Kofler
Software Mentions: 1
Published: about 6 years ago
10.1093/gbe/evz221
Deciphering Ancestral Sex Chromosome Turnovers Based on Analysis of Male Mutation Bias
Cited by: 9
Author(s): Armando Acosta, Mónica Martínez-Pacheco, Karina Díaz-Barba, Niccole Porras, Mariana Gutiérrez-Mariscal, Diego Cortez
Software Mentions: 1
Published: over 6 years ago
10.2196/14766
Serious Gaming During Multidisciplinary Rehabilitation for Patients With Chronic Pain or Fatigue Symptoms: Mixed Methods Design of a Realist Process Evaluation
Cited by: 8
Author(s): Miel A. P. Vugts, A.M.E.E. Zedlitz, Margot C. W. Joosen, Hubertus J. M. Vrijhoef
Software Mentions: 1
Published: about 6 years ago
10.3390/cancers12082151
Germline Genetic Findings Which May Impact Therapeutic Decisions in Families with a Presumed Predisposition for Hereditary Breast and Ovarian Cancer
Cited by: 4
Author(s): Carolina Velázquez, Kim De Leeneer, Eva Esteban-Cardeñosa, Francisco Avila Cobos, Enrique Lastra, Luis E. Abella, Virginia de la Cruz, Carmen D. Lobatón, Kathleen Claes, Mercedes Durán, Mar Infante
Software Mentions: 1
Published: almost 6 years ago
10.1093/gbe/evy256
Insights into the Evolution of the New World Diploid Cottons (<i>Gossypium</i>, Subgenus<i>Houzingenia</i>) Based on Genome Sequencing
Cited by: 34
Author(s): Corrinne E. Grover, Mark A. Arick, Adam Thrash, Justin L. Conover, William S. Sanders, Daniel G. Peterson, James Frelichowski, Jodi A. Scheffler, Brian E. Scheffler, Jonathan F. Wendel
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2016.02137
The Resistome of Farmed Fish Feces Contributes to the Enrichment of Antibiotic Resistance Genes in Sediments below Baltic Sea Fish Farms
Cited by: 94
Author(s): Windi I. Muziasari, Leena Pitkänen, Henning Sørum, Robert D. Stedtfeld, James M. Tiedje, Marko Virta
Software Mentions: 1
Published: over 9 years ago
10.1093/gbe/evy255
Genome Reduction in the Mosquito Symbiont<i>Asaia</i>
Cited by: 16
Author(s): Diego Peres Alonso, Maria Vittoria Mancini, Claudia Damiani, Alessia Cappelli, Irene Ricci, Marcus Vinícius Niz Alvarez, Claudio Bandi, Paulo Eduardo Martins Ribolla, Guido Favia
Software Mentions: 1
Published: over 7 years ago
10.1186/s13046-016-0317-z
Pancreatic cancer cell-derived IGFBP-3 contributes to muscle wasting
Cited by: 37
Author(s): Xiuyan Huang, Zili Huang, Juhong Yang, Yingbin Xu, Jiusong Sun, Qi Zheng, Chunyao Wei, Wei Song, Yuan Zhang
Software Mentions: 1
Published: about 10 years ago
10.1002/ece3.7094
Forest floor plant diversity drives the use of mature spruce forests by European bison
Cited by: 5
Author(s): Bogdan Jaroszewicz, Joanna Borysowicz, Olga Cholewińska
Software Mentions: 1
Published: over 5 years ago
10.1093/gbe/evy224
Assessing genomic admixture between cryptic Plutella moth species following secondary contact
Cited by: 3
Author(s): Christopher Ward, Simon W. Baxter
Software Mentions: 1
Published: over 7 years ago
10.3389/fgene.2021.693936
Genome-Wide Identification and Characterization of the Potato IQD Family During Development and Stress
Cited by: 9
Author(s): Chao Mei, Yuwei Liu, Xue Dong, Qianna Song, Huijie Wang, Hongwei Shi, Feng Rui-yun
Software Mentions: 1
Published: almost 5 years ago
10.1136/bmjopen-2017-016866
Effect of weekend admission on process of care and clinical outcomes for the management of acute coronary syndromes: a retrospective analysis of three UK centres
Cited by: 13
Author(s): Glen P. Martin, Tim Kinnaird, Matthew Sperrin, Richard Anderson, Amr Gamal, Avais Jabbar, Chun Shing Kwok, Diane Barker, Grant Heatlie, Azfar Zaman, Mamas A. Mamas
Software Mentions: 1
Published: almost 9 years ago
10.1186/s13046-019-1384-8
Hypoxic exosomes facilitate angiogenesis and metastasis in esophageal squamous cell carcinoma through altering the phenotype and transcriptome of endothelial cells
Cited by: 82
Author(s): Yu Mao, Yimin Wang, Dong Liu, Yunjie Zhang, Yanqiu Zhang, Chao Wang, Qiang Zhang, Shuanying Yang, Liyan Cao, Mengjie Zhang, Xin Li, Zhanzhao Fu
Software Mentions: 1
Published: over 6 years ago
10.3390/nu11051124
Dietary Egg Sphingomyelin Prevents Aortic Root Plaque Accumulation in Apolipoprotein-E Knockout Mice
Cited by: 18
Author(s): Courtney Millar, Gregory H Norris, A. Vitols, Christopher García, Samantha Seibel, Liya Anto, Christopher N. Blesso
Software Mentions: 1
Published: about 7 years ago
10.3389/fgene.2021.665555
Identification of a Competing Endogenous RNA Network Related to Immune Signature in Lung Adenocarcinoma
Cited by: 2
Author(s): Ting Zhu, Yongjun Yu, Jun Li, Kewei Ren
Software Mentions: 1
Published: about 5 years ago
10.3390/v11040332
Experimental Infection of Sand Flies by Massilia Virus and Viral Transmission by Co-Feeding on Sugar Meal
Cited by: 9
Author(s): Magdalena Jancarova, Laurence Bichaud, Jana Hlaváčová, Stéphane Priet, Nazlı Ayhan, Tatiana Spitzová, Petr Volf, Rémi N. Charrel
Software Mentions: 1
Published: about 7 years ago
10.1186/s13046-020-01718-4
Mir-20a-5p induced WTX deficiency promotes gastric cancer progressions through regulating PI3K/AKT signaling pathway
Cited by: 31
Author(s): Jian Li, Danli Ye, Peng Shen, Xiaorong Liu, Peirong Zhou, Gangjie Zhu, Yangwei Xu, Yun Fu, Xuanqi Li, Jingbo Sun, Jian Xu, Qingling Zhang
Software Mentions: 1
Published: over 5 years ago
10.3390/cancers13061471
Epithelial Mutant p53 Promotes Resistance to Anti-PD-1-Mediated Oral Cancer Immunoprevention in Carcinogen-Induced Mouse Models
Cited by: 4
Author(s): Jin Wang, Yuan Hu, Vicente Escamilla-Rivera, Cassandra L. Gonzalez, Lin Tang, Bingbing Wang, Adel K. El‐Naggar, Jeffrey N. Myers, Carlos Caulín
Software Mentions: 1
Published: about 5 years ago
10.3389/fmicb.2017.02372
Comparing the Healthy Nose and Nasopharynx Microbiota Reveals Continuity As Well As Niche-Specificity
Cited by: 85
Author(s): Ilke De Boeck, Stijn Wittouck, Sander Wuyts, Eline Oerlemans, Marianne F.L. van den Broek, Dieter Vandenheuvel, Olivier M. Vanderveken, Sarah Lebeer
Software Mentions: 1
Published: over 8 years ago
10.1186/s13046-021-01848-3
Overexpression of NELFE contributes to gastric cancer progression via Wnt/β-catenin signaling-mediated activation of CSNK2B expression
Cited by: 10
Author(s): Shijun Yu, Li Li, Hui Cai, Bin He, Yong Gao, Yandong Li
Software Mentions: 1
Published: over 5 years ago
10.1038/s42003-021-02609-w
Phylogeographic reconstruction of the marbled crayfish origin
Cited by: 6
Author(s): Julian Gutekunst, Olena Maiakovska, Katharina Hanna, Panagiotis Provataris, Hannes Horn, Stephan Wolf, Christopher E. Skelton, Nathan J. Dorn, Frank Lyko
Software Mentions: 1
Published: over 4 years ago
10.1002/mbo3.557
Effects of cosmetics on the skin microbiome of facial cheeks with different hydration levels
Cited by: 48
Author(s): Hyo‐Jung Lee, Sang Eun Jeong, Soyoun Lee, Sung Woo Kim, Hyuntak Han, Che Ok Jeon
Software Mentions: 1
Published: over 8 years ago
10.1038/s42003-020-1052-8
SAMHD1 is a key regulator of the lineage-specific response of acute lymphoblastic leukaemias to nelarabine
Cited by: 20
Author(s): Tamara Rothenburger, Katie-May McLaughlin, Tobias Herold, C. Schneider, Thomas Oellerich, Florian Rothweiler, Andrew Feber, Tim R. Fenton, Mark N. Wass, Oliver T. Keppler, Martin Michaelis, Jindrich Cinatl
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.4158
Longevity and population age structure of the arroyo southwestern toad (<i>Anaxyrus californicus</i>) with drought implications
Cited by: 9
Author(s): Robert N. Fisher, Cheryl S. Brehme, Stacie A. Hathaway, Tim E. Hovey, Manna L. Warburton, Drew C. Stokes
Software Mentions: 1
Published: about 8 years ago
10.1136/bmjophth-2019-000404
Macular hole morphology and measurement using an automated three-dimensional image segmentation algorithm
Cited by: 12
Author(s): Yunzi Chen, Amar Vijai Nasrulloh, I. J. Wilson, Caspar Geenen, Maged Habib, Bogusław Obara, David Steel
Software Mentions: 1
Published: almost 6 years ago
10.1111/eva.12804
Natural <i>Wolbachia</i> infections are common in the major malaria vectors in Central Africa
Cited by: 38
Author(s): Diégo Ayala, Ousman Akone‐Ella, Nil Rahola, Pierre Kengne, Marc F. Ngangue, Fabrice Mezeme, Boris Makanga, Martha Nigg, Carlo Costantini, Frédéric Simard, Franck Prugnolle, Benjamín Roche, Olivier Duron, Christophe Paupy
Software Mentions: 1
Published: almost 7 years ago
10.1186/s12951-020-00624-3
Saliva exosomes-derived UBE2O mRNA promotes angiogenesis in cutaneous wounds by targeting SMAD6
Cited by: 41
Author(s): Bobin Mi, Lang Chen, Yuan Xiong, Chenchen Yan, Hang Xue, Adriana C. Panayi, Jing Liu, Liangcong Hu, Yiqiang Hu, Faqi Cao, Yun Sun, Wu Zhou, Guohui Liu
Software Mentions: 1
Published: about 6 years ago
10.3390/v7020456
In Search of Pathogens: Transcriptome-Based Identification of Viral Sequences from the Pine Processionary Moth (Thaumetopoea pityocampa)
Cited by: 14
Author(s): Agata Jakubowska, Remziye Nalçacıoğlu, Anabel Millán-Leiva, Alejandro Sanz-Carbonell, Hacer Muratoğlu, Salvador Herrero, Zihni Demirbağ
Software Mentions: 1
Published: over 11 years ago
10.1093/ve/veab069
The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the spike protein
Cited by: 29
Author(s): Paola Cristina Resende, Felipe Gomes Naveca, Roberto D. Lins, Filipe Zimmer Dezordi, Matheus Ferraz, Emerson G. Moreira, Danilo F. Coêlho, Fernando Couto Motta, Ariane Gomes Paixão, Luciana Appolinario, Renata Serrano Lopes, Ana Carolina da Fonseca Mendonça, Alice Sampaio Barreto da Rocha, Valdinete Alves do Nascimento, Victor Costa de Souza, George Silva, Fernanda Nascimento, Lídio Gonçãlves Lima Neto, Fabiano Vieira da Silva, Irina Nastassja Riediger, Maria do Carmo Debur, Anderson Brandão Leite, Tirza Mattos, Cristiano Fernandes da Costa, Felicidade Mota Pereira, Cliomar Alves dos Santos, Darcita Büerger Rovaris, Sandra Bianchini Fernandes, Adriano Abbud, Cláudio Tavares Sacchi, Ricardo Khouri, André Felipe Leal Bernardes, Edson Delatorre, Tiago Gräf, Marilda Mendonça Siqueira, Gonzalo Bello, Gabriel Luz Wallau
Software Mentions: 1
Published: almost 5 years ago
10.1038/s42003-021-01803-0
smiFISH and embryo segmentation for single-cell multi-gene RNA quantification in arthropods
Cited by: 19
Author(s): Llilians Calvo, Matthew Ronshaugen, Tom Pettini
Software Mentions: 1
Published: about 5 years ago
10.1080/19420889.2020.1812865
New insights into the limited thermotolerance of anhydrobiotic tardigrades
Cited by: 4
Author(s): Ricardo Cardoso Neves, Robyn M. Stuart, Nadja Møbjerg
Software Mentions: 1
Published: over 6 years ago
10.3390/biology10090892
Qualitative and Quantitative Resistance against Early Blight Introgressed in Potato
Cited by: 11
Author(s): Pieter J. Wolters, Doret Wouters, Emil J. Kromhout, D. J. Huigen, R.G.F. Visser, Vivianne G. A. A. Vleeshouwers
Software Mentions: 1
Published: over 4 years ago
10.12688/f1000research.11281.1
The elephant shark methylome reveals conservation of epigenetic regulation across jawed vertebrates
Cited by: 22
Author(s): Julian Peat, Oscar Ortega‐Recalde, Olga Kardailsky, Timothy A. Hore
Software Mentions: 1
Published: about 9 years ago
10.3389/fpls.2020.00643
Stomata and Sporophytes of the Model Moss Physcomitrium patens
Cited by: 10
Author(s): Robert S. Caine, Caspar Chater, Andrew J. Fleming, Julie E. Gray
Software Mentions: 1
Published: about 6 years ago
10.3389/fgene.2019.01065
Genome-Wide Analysis of Genetic Diversity in Plasmodium falciparum Isolates From China–Myanmar Border
Cited by: 15
Author(s): Run Ye, Yini Tian, Yufu Huang, Yilong Zhang, Jian Wang, Xin Sun, Hongning Zhou, Dongmei Zhang, Weiqing Pan
Software Mentions: 1
Published: over 6 years ago
10.1007/s12031-017-0898-9
Selection and Prioritization of Candidate Drug Targets for Amyotrophic Lateral Sclerosis Through a Meta-Analysis Approach
Cited by: 20
Author(s): Giovanna Morello, Antonio Gianmaria Spampinato, Francesca Luisa Conforti, Velia D’Agata, Sebastiano Cavallaro
Software Mentions: 1
Published: over 9 years ago
10.1111/evo.12401
DETECTING CRYPTIC INDIRECT GENETIC EFFECTS
Cited by: 27
Author(s): Nathan W. Bailey, Jessica L. Hoskins
Software Mentions: 1
Published: about 12 years ago
10.3389/fped.2021.691599
Immunotherapies for Anti-N-M-methyl-D-aspartate Receptor Encephalitis: Multicenter Retrospective Pediatric Cohort Study in China
Cited by: 5
Author(s): Shiqi Guang, Jianjun Ma, Xiaotun Ren, Shuizhen Zhou, Jian Yang, Jianzhao Zhang, Xiaoshuang Cao, Linxiu Zhong, Xiao Ding, Xiaosu Wang, Chang­hong Ren, Weihua Zhang, Linmei Zhang, Min Zhang, Jing Sun, Miriam Kessi, Fei Yin, Jing Peng, Yuwu Jiang
Software Mentions: 1
Published: almost 5 years ago
10.1016/j.csbj.2019.03.001
Evolution of Genomic Base Composition: From Single Cell Microbes to Multicellular Animals
Cited by: 24
Author(s): Jon Bohlin, John H.‐O. Pettersson
Software Mentions: 1
Published: over 7 years ago
10.1002/ece3.6987
Help or hindrance? The evolutionary impact of whole‐genome duplication on immunogenetic diversity and parasite load
Cited by: 0
Author(s): Ellen Bell, Joanne Cable, Cláudio Oliveira, David S. Richardson, Levi Yant, Martin I. Taylor
Software Mentions: 1
Published: over 5 years ago
10.1093/ve/vey005
Private collection: high correlation of sample collection and patient admission date in clinical microbiological testing complicates sharing of phylodynamic metadata
Cited by: 6
Author(s): Ryan C. Shean, Alexander L. Greninger
Software Mentions: 1
Published: over 8 years ago
10.7554/eLife.58910
S-phase-independent silencing establishment in Saccharomyces cerevisiae
Cited by: 16
Author(s): Davis Goodnight, Jasper Rine
Software Mentions: 1
Published: almost 6 years ago
10.1093/ve/vex011
Viral coinfection is shaped by host ecology and virus–virus interactions across diverse microbial taxa and environments
Cited by: 59
Author(s): Samuel L. Díaz‐Muñoz
Software Mentions: 1
Published: over 9 years ago
10.1186/s12985-021-01655-4
Genomic and functional characterization of five novel Salmonella-targeting bacteriophages
Cited by: 10
Author(s): Marta Kuźmińska-Bajor, Paulina Śliwka, Maciej Ugorski, Paweł Korzeniowski, Aneta Skaradzińska, Maciej Kuczkowski, Magdalena Narajaczyk, Alina Wieliczko, Rafał Kolenda
Software Mentions: 1
Published: over 4 years ago
10.7554/eLife.66815
Human airway cells prevent SARS-CoV-2 multibasic cleavage site cell culture adaptation
Cited by: 64
Author(s): Mart M. Lamers, Anna Z Mykytyn, Tim I Breugem, Yiquan Wang, Douglas C. Wu, Samra Riesebosch, Petra B. van den Doel, Debby Schipper, Theo M. Bestebroer, Nicholas C. Wu, Bart L. Haagmans
Software Mentions: 1
Published: about 5 years ago
10.3390/biology10080819
Artificial Plantation Responses to Periodic Submergence in Massive Dam and Reservoir Riparian Zones: Changes in Soil Properties and Bacterial Community Characteristics
Cited by: 19
Author(s): Jiajia Li, Lijuan Li, Muhammad Arif, Dongdong Ding, Xin Hu, Jie Zheng, Zuoqiang Yuan, Changxiao Li
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12985-018-1095-3
Virome analyses of Hevea brasiliensis using small RNA deep sequencing and PCR techniques reveal the presence of a potential new virus
Cited by: 9
Author(s): Paula Luize Camargos Fonseca, Fernanda Badotti, Tatiana Flávia Pinheiro de Oliveira, Antônio Augusto Fonseca, Aline B. M. Vaz, Luiz Marcelo Ribeiro Tomé, Jônatas Santos Abrahão, João Trindade Marques, Giliane S. Trindade, Priscila Chaverri, Eric Roberto Guimarães Rocha Aguiar, Aristóteles Goés-Neto
Software Mentions: 1
Published: over 7 years ago
10.7554/eLife.60095
Peripheral natural killer cells in chronic hepatitis B patients display multiple molecular features of T cell exhaustion
Cited by: 15
Author(s): Marie Marotel, Marine Villard, Annabelle Drouillard, Issam Tout, Laurie Besson, Omran Allatif, Marine Pujol, Yamila Rocca, Michelle Ainouze, Guillaume Roblot, Sébastien Viel, Melissa Gomez, V. Loustaud, Sophie Alain, David Durantel, Thierry Walzer, Uzma Hasan, Antoine Marçais
Software Mentions: 1
Published: over 5 years ago
10.1186/1743-422X-10-62
Mutation Reporter Tool: An online tool to interrogate loci of interest, with its utility demonstrated using hepatitis B virus
Cited by: 15
Author(s): Trevor Graham Bell, Anna Kramvis
Software Mentions: 1
Published: over 13 years ago
10.1007/s00428-021-03100-x
CD73 expression in normal, hyperplastic, and neoplastic thyroid: a systematic evaluation revealing CD73 overexpression as a feature of papillary carcinomas
Cited by: 3
Author(s): Inês Monteiro, Edoardo Missiaglia, Amedeo Sciarra, João Vasco Santos, Justine Bouilly, Pedro Romero, Christine Sempoux, Laurence de Leval
Software Mentions: 1
Published: about 5 years ago
10.1111/eva.13289
Larval development in the Pacific oyster and the impacts of ocean acidification: Differential genetic effects in wild and domesticated stocks
Cited by: 5
Author(s): Evan Durland, Pierre De Wit, Eli Meyer, Chris Langdon
Software Mentions: 1
Published: almost 5 years ago
10.1016/j.csbj.2020.04.004
Drug repositioning or target repositioning: A structural perspective of drug-target-indication relationship for available repurposed drugs
Cited by: 36
Author(s): Daniele Parisi, Melissa F. Adasme, А. Н. Свешникова, Sarah Naomi Bolz, Yves Moreau, Michael Schroeder
Software Mentions: 1
Published: over 6 years ago
10.1111/cobi.13276
Effects of human demand on conservation planning for biodiversity and ecosystem services
Cited by: 49
Author(s): Keri B. Watson, Gillian L. Galford, Laura J. Sonter, Insu Koh, Taylor H. Ricketts
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2019.02502
Microbiome Response to Hot Water Treatment and Potential Synergy With Biological Control on Stored Apples
Cited by: 47
Author(s): Birgit Wassermann, Peter Kusstatscher, Gabriele Berg
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.28865
Nanoscale architecture of the Schizosaccharomyces pombe contractile ring
Cited by: 75
Author(s): Nathan A. McDonald, Abigail Lind, Sarah E. Smith, Rong Li, Kathleen L. Gould
Software Mentions: 1
Published: over 8 years ago
10.3389/fpls.2021.637190
Quantitative High-Throughput, Real-Time Bioassay for Plant Pathogen Growth in vivo
Cited by: 2
Author(s): Chunqiu Zhang, Ben N. Mansfeld, Ying-Zu Lin, Rebecca Grumet
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.3080
Division within the North American boreal forest: Ecological niche divergence between the Bicknell's Thrush (<i>Catharus bicknelli</i>) and Gray‐cheeked Thrush (<i>C. minimus</i>)
Cited by: 12
Author(s): Alyssa M. FitzGerald
Software Mentions: 1
Published: almost 9 years ago
10.3390/nu13041369
Global Trends (1961–2017) in Human Dietary Potassium Supplies
Cited by: 13
Author(s): Diriba B. Kumssa, Edward J. M. Joy, Martin R. Broadley
Software Mentions: 1
Published: about 5 years ago
10.7554/eLife.12850
Wnt, Ptk7, and FGFRL expression gradients control trunk positional identity in planarian regeneration
Cited by: 61
Author(s): Rachel M. Lander, Christian P. Petersen
Software Mentions: 1
Published: about 10 years ago