Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: about 3 years ago
4,921 dependent packages
2,865,232 downloads last month

Enhanced Analysis
Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu
Repository Activity:
Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses
  • +520 Educational commit emails
    26 contributors with educational email addresses
  • +18 Science terms in README
    9 scientific terms found in README

Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.3390/ijms22041830
Exploitation of Tolerance of Wheat Kernel Weight and Shape-Related Traits from Aegilops tauschii under Heat and Combined Heat-Drought Stresses
Cited by: 10
Author(s): Gamila Mohamed Idris Elhadi, Nasrein Mohamed Kamal, Yasir Serag Alnor Gorafi, Yuji Yamasaki, Kanenori Takata, Izzat S. A. Tahir, Michael Itam, Hiroyuki Tanaka, Hisashi Tsujimoto
Software Mentions: 1
Published: over 5 years ago
10.1016/S2666-5247(20)30149-X
Definition of a genetic relatedness cutoff to exclude recent transmission of meticillin-resistant Staphylococcus aureus: a genomic epidemiology analysis
Cited by: 63
Author(s): Francesc Español i Coll, Kathy E. Raven, Gwenan M. Knight, Beth Blane, Ewan M. Harrison, Danielle Leek, David Enoch, Nicholas Brown, Julian Parkhill, Sharon J. Peacock
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-018-29825-5
Skeletal muscle cutoff values for sarcopenia diagnosis using T10 to L5 measurements in a healthy US population
Cited by: 259
Author(s): Brian A. Derstine, Sven A. Holcombe, Brian E. Ross, Nicholas Wang, Grace L. Su, Stewart C. Wang
Software Mentions: 1
Published: about 8 years ago
10.1186/s13023-020-01367-y
Natural history of lung function in spinal muscular atrophy
Cited by: 50
Author(s): Camiel A. Wijngaarde, Esther S. Veldhoen, Ruben P A van Eijk, Marloes Stam, Louise Otto, Fay‐Lynn Asselman, Roelie M. Wösten‐van Asperen, Erik H.J. Hulzebos, Laura P. Verweij-van den Oudenrijn, Bart Bartels, Inge Cuppen, Renske I. Wadman, Leonard H. van den Berg, Cornelis K. van der Ent, W. Ludo van der Pol
Software Mentions: 1
Published: over 6 years ago
10.18632/aging.103926
Identification of a competing endogenous RNA axis related to gastric cancer
Cited by: 9
Author(s): Fuqiang Zu, Hezhou Han, Weiwei Sheng, Jian Sun, Hui Zang, Yu Liang, Qingfeng Li
Software Mentions: 1
Published: about 6 years ago
10.3389/fcvm.2021.697737
Aortography Keypoint Tracking for Transcatheter Aortic Valve Implantation Based on Multi-Task Learning
Cited by: 3
Author(s): Viacheslav V. Danilov, K. Yu. Klyshnikov, Olga Gerget, Igor P. Skirnevsky, Anton G. Kutikhin, А. А. Шилов, Vladimir Ganyukov, Е. А. Овчаренко
Software Mentions: 1
Published: over 5 years ago
10.1080/19420889.2020.1812865
New insights into the limited thermotolerance of anhydrobiotic tardigrades
Cited by: 4
Author(s): Ricardo Cardoso Neves, Robyn M. Stuart, Nadja Møbjerg
Software Mentions: 1
Published: almost 7 years ago
10.1128/MRA.00907-20
Metagenomics of Wastewater Influent from Southern California Wastewater Treatment Facilities in the Era of COVID-19
Cited by: 10
Author(s): Jason A. Rothman, Theresa B Loveless, Madison Griffith, Joshua A. Steele, John F. Griffith, Katrine Whiteson
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-018-30500-y
The Gpr1-regulated Sur7 family protein Sfp2 is required for hyphal growth and cell wall stability in the mycoparasite Trichoderma atroviride
Cited by: 24
Author(s): Lea Atanasova, Sabine Gruber, Alexander Lichius, Theresa Radebner, Leoni Abendstein, Martin Münsterkötter, Nancy Stralis‐Pavese, Paweł P. Łabaj, David P. Kreil, Susanne Zeilinger
Software Mentions: 1
Published: about 8 years ago
10.1111/eva.12897
The role of windows of selection and windows of dominance in the evolution of insecticide resistance in human disease vectors
Cited by: 11
Author(s): Andy South, Rosemary Susan Lees, Gala Garrod, Jessica Carson, David Malone, Ian M. Hastings
Software Mentions: 1
Published: almost 7 years ago
10.1111/eva.12430
Sockeye salmon repatriation leads to population re‐establishment and rapid introgression with native kokanee
Cited by: 22
Author(s): Andrew J. Veale, Michael A. Russello
Software Mentions: 1
Published: about 10 years ago
10.1038/s41598-019-55800-9
Not all birds have a single dominantly expressed MHC-I gene: Transcription suggests that siskins have many highly expressed MHC-I genes
Cited by: 10
Author(s): Anna Drews, Helena Westerdahl
Software Mentions: 1
Published: almost 7 years ago
10.1111/eva.12804
Natural <i>Wolbachia</i> infections are common in the major malaria vectors in Central Africa
Cited by: 38
Author(s): Diégo Ayala, Ousman Akone‐Ella, Nil Rahola, Pierre Kengne, Marc F. Ngangue, Fabrice Mezeme, Boris Makanga, Martha Nigg, Carlo Costantini, Frédéric Simard, Franck Prugnolle, Benjamín Roche, Olivier Duron, Christophe Paupy
Software Mentions: 1
Published: over 7 years ago
10.1038/s42003-021-01803-0
smiFISH and embryo segmentation for single-cell multi-gene RNA quantification in arthropods
Cited by: 19
Author(s): Llilians Calvo, Matthew Ronshaugen, Tom Pettini
Software Mentions: 1
Published: over 5 years ago
10.1002/mgg3.536
Molecular diagnosis of somatic overgrowth conditions: A single‐center experience
Cited by: 25
Author(s): Emilie Lalonde, Jessica Ebrahimzadeh, Keith Rafferty, Jennifer Richards‐Yutz, Richard Grant, Erik Toorens, Jennifer Marie Rosado, Erica Schindewolf, Tapan Ganguly, Jennifer M. Kalish, Matthew A. Deardorff, Arupa Ganguly
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-019-56476-x
High MAST2 mRNA expression and its role in diagnosis and prognosis of liver cancer
Cited by: 9
Author(s): Yan Jiao, Yanqing Li, Peiqiang Jiang, Zhuo Fu, Yahui Liu
Software Mentions: 1
Published: almost 7 years ago
10.3390/cells9040922
Epigenetic Requirements for Triggering Heterochromatinization and Piwi-Interacting RNA Production from Transgenes in the Drosophila Germline
Cited by: 5
Author(s): Pavel A Komarov, Olesya Sokolova, Natalia Akulenko, Emilie Brasset, Silke Jensen, Alla Kalmykova
Software Mentions: 1
Published: over 6 years ago
10.1007/s11356-020-10096-5
17α-ethynylestradiol (EE2) limits the impact of ibuprofen upon respiration by streambed biofilms in a sub-urban stream
Cited by: 7
Author(s): Peter McClean, William Ross Hunter
Software Mentions: 1
Published: over 6 years ago
10.1111/eva.13133
Dispersal ability predicts spatial genetic structure in native mammals persisting across an urbanization gradient
Cited by: 14
Author(s): Jonathan L. Richardson, Sozos Michaelides, Matthew Combs, Mihajla Djan, Lianne Bisch, Kerry Barrett, Georgianna Silveira, Justin Butler, Than Thar Aye, Jason Munshi‐South, Michael DiMatteo, Charles H. Brown, Thomas J. McGreevy
Software Mentions: 1
Published: almost 6 years ago
10.3390/molecules24071445
In Silico Investigation of the Anti-Tumor Mechanisms of Epigallocatechin-3-Gallate
Cited by: 17
Author(s): Wang Wang, Xiuhong Xiong, Xue Li, Qinyang Zhang, Wentao Yang, Linfang Du
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-019-56965-z
Thermotolerance experiments on active and desiccated states of Ramazzottius varieornatus emphasize that tardigrades are sensitive to high temperatures
Cited by: 30
Author(s): Ricardo Cardoso Neves, Lykke K. B. Hvidepil, Thomas L. Sørensen-Hygum, Robyn M. Stuart, Nadja Møbjerg
Software Mentions: 1
Published: almost 7 years ago
10.3390/ijms21051550
In Silico Insights into Protein–Protein Interaction Disruptive Mutations in the PCSK9-LDLR Complex
Cited by: 13
Author(s): William R. Martin, Felice C. Lightstone, Feixiong Cheng
Software Mentions: 1
Published: over 6 years ago
10.18632/oncotarget.24650
Acquired resistance to temsirolimus is associated with integrin α7 driven chemotactic activity of renal cell carcinoma in vitro
Cited by: 3
Author(s): Tobias Engl, Jochen Rutz, Sebastian Maxeiner, Sorel Fanguen, Eva Juengel, Sebastian E. Koschade, Frederik C. Roos, Wael Khoder, Igor Tsaur, Roman A. Blaheta
Software Mentions: 1
Published: over 8 years ago
10.3389/fcvm.2021.650278
Metabolism and Chronic Inflammation: The Links Between Chronic Heart Failure and Comorbidities
Cited by: 23
Author(s): Zhiwei Li, Hongmei Zhao, Jing Wang
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0166854
Single Amino Acid Repeats in the Proteome World: Structural, Functional, and Evolutionary Insights
Cited by: 18
Author(s): Amitha Sampath Kumar, Divya Tej Sowpati, Rakesh Mishra
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pbio.1002555
Phosphorylation of Def Regulates Nucleolar p53 Turnover and Cell Cycle Progression through Def Recruitment of Calpain3
Cited by: 29
Author(s): Yihong Guan, Delai Huang, Feng Chen, Ce Gao, Ting Tao, Hui Shi, Shanshan Zhao, Zuyuan Liao, Li Jan Lo, Yingchun Wang, Jun Chen, Jinrong Peng
Software Mentions: 1
Published: about 10 years ago
10.3390/plants10020189
Relative Telomere Length and Telomerase Reverse Transcriptase (TERT) Expression Are Associated with Age in Almond (Prunus dulcis [Mill.] D.A.Webb)
Cited by: 4
Author(s): Katherine M. D’Amico-Willman, Elizabeth S. Anderson, Thomas M. Gradziel, Jonathan Fresnedo-Ramírez
Software Mentions: 1
Published: almost 6 years ago
10.3390/ijms21051580
Disparity between Inter-Patient Molecular Heterogeneity and Repertoires of Target Drugs Used for Different Types of Cancer in Clinical Oncology
Cited by: 16
Author(s): Marianna Zolotovskaia, Maxim Sorokin, Ivan Petrov, Elena Poddubskaya, Alexey Moiseev, Marina Sekacheva, Nicolas Borisov, Victor Tkachev, Andrew Garazha, А. Д. Каприн, Peter Shegay, Alf Giese, Ella Kim, S. A. Rumyantsev, Anton Buzdin
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2017.01726
In Silico Screening of the Human Gut Metaproteome Identifies Th17-Promoting Peptides Encrypted in Proteins of Commensal Bacteria
Cited by: 18
Author(s): Claudio Hidalgo-Cantabrana, Marco Antonio Moro-García, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Anália Lourenço, Rebeca Alonso-Arias, Borja Sánchez
Software Mentions: 1
Published: about 9 years ago
10.1038/s41598-020-57859-1
Exploring Patterns of Dynamic Size Changes of Lesions after Hepatic Microwave Ablation in an In Vivo Porcine Model
Cited by: 6
Author(s): Keno K. Bressem, Janis L. Vahldiek, Christoph Erxleben, Franz Poch, Seyd Shnaiyen, Beatrice Geyer, Kai S. Lehmann, Bernd Hamm, Stefan M. Niehues
Software Mentions: 1
Published: almost 7 years ago
10.1038/s42003-020-1052-8
SAMHD1 is a key regulator of the lineage-specific response of acute lymphoblastic leukaemias to nelarabine
Cited by: 20
Author(s): Tamara Rothenburger, Katie-May McLaughlin, Tobias Herold, C. Schneider, Thomas Oellerich, Florian Rothweiler, Andrew Feber, Tim R. Fenton, Mark N. Wass, Oliver T. Keppler, Martin Michaelis, Jindrich Cinatl
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-57564-z
Preventing traditional management can cause grassland loss within 30 years in southern Brazil
Cited by: 22
Author(s): Rafael Barbizan Sühs, Eduardo Luís Hettwer Giehl, Nivaldo Peroni
Software Mentions: 1
Published: almost 7 years ago
10.1111/eva.13289
Larval development in the Pacific oyster and the impacts of ocean acidification: Differential genetic effects in wild and domesticated stocks
Cited by: 5
Author(s): Evan Durland, Pierre De Wit, Eli Meyer, Chris Langdon
Software Mentions: 1
Published: about 5 years ago
10.1186/s12940-018-0376-z
Childhood and adolescent phenol and phthalate exposure and the age of menarche in Latina girls
Cited by: 50
Author(s): Alexandra M. Binder, Camila Corvalán, Antònia M. Calafat, Xiaoyun Ye, Verónica Mericq, Ana Pereira, Karin B. Michels
Software Mentions: 1
Published: over 8 years ago
10.3389/fcell.2021.660069
Zebrafish Cancer Predisposition Models
Cited by: 11
Author(s): Kim Kobar, Keon Collett, Sergey V. Prykhozhij, Jason N. Berman
Software Mentions: 1
Published: over 5 years ago
10.3390/cancers11121904
Potent Antitumor Activity of Liposomal Irinotecan in an Organoid- and CRISPR-Cas9-Based Murine Model of Gallbladder Cancer
Cited by: 10
Author(s): Zulrahman Erlangga, Katharina Wolff, Tanja Poth, Alexander Peltzer, Sven Nahnsen, Steffi Spielberg, Kai Timrott, Norman Woller, Florian Kühnel, Michael P. Manns, Anna Saborowski, Arndt Vogel, Michael Saborowski
Software Mentions: 1
Published: almost 7 years ago
10.1038/s42003-021-02609-w
Phylogeographic reconstruction of the marbled crayfish origin
Cited by: 6
Author(s): Julian Gutekunst, Olena Maiakovska, Katharina Hanna, Panagiotis Provataris, Hannes Horn, Stephan Wolf, Christopher E. Skelton, Nathan J. Dorn, Frank Lyko
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-020-58556-9
Cold-water coral (Lophelia pertusa) response to multiple stressors: High temperature affects recovery from short-term pollution exposure
Cited by: 13
Author(s): Alexis M. Weinnig, Carlos E. Gómez, Adam Hallaj, Erik E. Cordes
Software Mentions: 1
Published: over 6 years ago
10.3390/v11040332
Experimental Infection of Sand Flies by Massilia Virus and Viral Transmission by Co-Feeding on Sugar Meal
Cited by: 9
Author(s): Magdalena Jancarova, Laurence Bichaud, Jana Hlaváčová, Stéphane Priet, Nazlı Ayhan, Tatiana Spitzová, Petr Volf, Rémi N. Charrel
Software Mentions: 1
Published: over 7 years ago
10.3389/fnbeh.2015.00355
Assessing Fear Following Retrieval + Extinction Through Suppression of Baseline Reward Seeking vs. Freezing
Cited by: 14
Author(s): Jason Shumake, Marie‐H. Monfils
Software Mentions: 1
Published: almost 11 years ago
10.1038/s41598-020-58257-3
Effect of immediate cold formalin fixation on phosphoprotein IHC tumor biomarker signal in liver tumors using a cold transport device
Cited by: 4
Author(s): Melissa Lerch, Heidi L. Kenerson, David Chafin, Maria Westerhoff, Abbey Theiss, Michael Otter, Raymond S. Yeung, Geoffrey S. Baird
Software Mentions: 1
Published: over 6 years ago
10.1128/mSystems.01041-20
Genomes of the “ <i>Candidatus</i> Actinomarinales” Order: Highly Streamlined Marine Epipelagic Actinobacteria
Cited by: 16
Author(s): Mario López‐Pérez, Jose M. Haro‐Moreno, Jaime Iranzo, Francisco Rodrı́guez-Valera
Software Mentions: 1
Published: almost 6 years ago
10.3390/plants10081739
Context-Dependent Effects of Trichoderma Seed Inoculation on Anthracnose Disease and Seed Yield of Bean (Phaseolus vulgaris): Ambient Conditions Override Cultivar-Specific Differences
Cited by: 2
Author(s): Karina Gutiérrez-Moreno, Michelina Ruocco, Maurilia M. Monti, Octavio Martı́nez de la Vega, Martin Heil
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-020-59234-6
Characterization of HIV-1 diversity in various compartments at the time of primary infection by ultradeep sequencing
Cited by: 2
Author(s): Géraldine Gaube, Alix Armero, Maud Salmona, Marie-Laure Néré, Nadia Mahjoub, Caroline Lascoux-Combe, Audrey Gabassi, Sébastien Gallien, Ali Amara, Jean Michel Molina, Constance Delaugerre, Marie‐Laure Chaix
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-59579-y
Identification of flocculant wine yeast strains with improved filtration-related phenotypes through application of high-throughput sedimentation rate assays
Cited by: 7
Author(s): Cristián Varela, Caroline Bartel, Damian Espinase Nandorfy, Anthony R. Borneman, Simon A. Schmidt, Chris Curtin
Software Mentions: 1
Published: over 6 years ago
10.1186/1743-422X-10-62
Mutation Reporter Tool: An online tool to interrogate loci of interest, with its utility demonstrated using hepatitis B virus
Cited by: 15
Author(s): Trevor Graham Bell, Anna Kramvis
Software Mentions: 1
Published: over 13 years ago
10.3390/ijms20174216
Phenotype-Specific Therapeutic Effect of Rhodiola wallichiana var. cholaensis Combined with Dexamethasone on Experimental Murine Asthma and Its Comprehensive Pharmacological Mechanism
Cited by: 7
Author(s): Zhiqiang Pang, Nan Ran, Yuze Yuan, Cuizhu Wang, Guoqiang Wang, Hongqiang Lin, Alan Hsu, Jinping Liu, Fang Wang
Software Mentions: 1
Published: about 7 years ago
10.3389/fgene.2020.00303
Genomic Sequencing Capacity, Data Retention, and Personal Access to Raw Data in Europe
Cited by: 7
Author(s): Shaman Narayanasamy, Varvara Markina, Adrian Thorogood, Adriana Blazkova, Mahsa Shabani, Bartha Maria Knoppers, Barbara Prainsack, Robert Koesters
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-59839-x
Genomic scan of selective sweeps in Djallonké (West African Dwarf) sheep shed light on adaptation to harsh environments
Cited by: 15
Author(s): Isabel Álvarez, Amadou Traoré, L. Pérez‐Pardal, Nuria A. Menéndez‐Arias, F. Goyache
Software Mentions: 1
Published: over 6 years ago
10.3389/fcell.2020.616332
Genome-Scale CRISPR-Cas9 Transcriptional Activation Screening in Metformin Resistance Related Gene of Prostate Cancer
Cited by: 8
Author(s): Jiahong Chen, Yaqiang Huang, Zhenfeng Tang, Maozhang Li, Xuemei Ling, Jinxian Liao, Xiaobo Zhou, Shumin Fang, Haibo Zhao, Weide Zhong, Xia Yuan
Software Mentions: 1
Published: over 5 years ago
10.1016/S0140-6736(18)30697-4
Trends in future health financing and coverage: future health spending and universal health coverage in 188 countries, 2016–40
Cited by: 157
Author(s): Joseph L Dieleman, Nafis Sadat, Angela Y Chang, Nancy Fullman, Cristiana Abbafati, Pawan Acharya, Arsène Kouablan Adou, Aliasghar Ahmad Kiadaliri, Khurshid Alam, Reza Alizadeh‐Navaei, Ala’a Alkerwi, Walid Ammar, Carl Abelardo T Antonio, Olatunde Aremu, Solomon Weldegebreal Asgedom, Tesfay Mehari Atey, Leticia Ávila-Burgos, Rakesh Ayer, Hamid Badali, Maciej Banach, Amrit Banstola, Aleksandra Barać, Abate Bekele Belachew, Charles Birungi, Nicola Luigi Bragazzi, Nicholas J. K. Breitborde, Lucero Cahuana-Hurtado, Josip Car, Ferrán Catalá-López, Abigail Chapin, Catherine S Chen, Lalit Dandona, Rakhi Dandona, Ahmad Daryani, Samath D Dharmaratne, Manisha Dubey, Dumessa Edessa, Erika Eldrenkamp, Babak Eshrati, André Faro, Andrea B Feigl, Ama Pokuaa Fenny, Florian Fischer, Nataliya Foigt, Kyle J Foreman, Mamata Ghimire, Srinivas Goli, Alemayehu Hailu, Samer Hamidi, Hilda L Harb, Simon I Hay, Delia Hendrie, Gloria Ikilezi, Mehdi Javanbakht, Denny John, Jost B. Jonas, Alexander S Kaldjian, Amir Kasaeian, Yawukal chane Kasahun, Ibrahim Khalil, Young‐Ho Khang, Jagdish Khubchandani, Yun Jin Kim, Jonas Minet Kinge, Soewarta Kosen, Kristopher J. Krohn, G Anil Kumar, Alessandra Lafranconi, Hilton Y. Lam, Stefan Listl, Hassan Magdy Abd El Razek, Mohammed Magdy Abd El Razek, Azeem Majeed, Reza Malekzadeh, Déborah Carvalho Malta, Gabriel Martínez, George A. Mensah, Atte Meretoja, Angela E Micah, Ted R. Miller, Aibek E. Mirrakhimov, Fitsum Weldegebreal Mlashu, Ebrahim Mohammed, Shafiu Mohammed, Mark Moses, Seyyed Meysam Mousavi, Mohsen Naghavi, Vinay Nangia, Frida Ngalesoni, Cuong Tat Nguyen, Trang Huyen Nguyen, Yirga Legesse Niriayo, Mehdi Noroozi, Mayowa Owolabi, Tejas Patel, Paula B. Andrade, Suzanne Polinder, Mostafa Qorbani, Anwar Rafay, Alireza Rafiei, Vafa Rahimi-Movaghar, Rajesh Kumar, Usha Ram, Chhabi Lal Ranabhat, Sarah Ray, Robert C. Reiner, Haniye Sadat Sajadi, Rocco Santoro, João Vasco Santos, Abdur Razzaque Sarker, Benn Sartorius, Maheswar Satpathy, Sadaf G Sepanlou, Masood Ali Shaikh, Mehdi Sharif, Jun She, Aziz Sheikh, Mark G. Shrime, Mekonnen Sisay, Samir Soneji, Moslem Soofi, Reed J D Sorensen, Henok Tadesse, Tianchan Tao, Tara Templin, Azeb Gebresilassie Tesema, Subash Thapa, Ruoyan Tobe‐Gai, Roman Topór-Mądry, Bach Xuan Tran, Khanh Bao Tran, Tung Thanh Tran, Eduardo A. Undurraga, Tommi Vasankari, Francesco Saverio Violante, Andrea Werdecker, Tissa Wijeratne, Gelin Xu, Naohiro Yonemoto, Mustafa Z Younis, Chuanhua Yu, Maysaa El Sayed Zaki, Bianca S. Zlavog, Christopher J L Murray
Software Mentions: 1
Published: over 8 years ago
10.1186/s41236-020-0010-1
Detecting heterogeneity in and between breast cancer cell lines
Cited by: 33
Author(s): Yang Shen, Betina Schmidt, Hans Kubitschke, Erik Morawetz, Benjamin Wolf, Josef A. Käs, Wolfgang Losert
Software Mentions: 1
Published: over 6 years ago
10.3389/fcell.2021.632183
Transcriptome and DNA Methylation Profiles of Mouse Fetus and Placenta Generated by Round Spermatid Injection
Cited by: 4
Author(s): Haibo Zhu, Hao Sun, Daren Yu, Tianda Li, Hai Tang, Chao Liu, Ying Zhang, Yurong Chen, Xiangpeng Dai, Ziyi Li, Wei Li, Ruizhi Liu, Guihai Feng, Qi Zhou
Software Mentions: 1
Published: over 5 years ago
10.1002/mbo3.557
Effects of cosmetics on the skin microbiome of facial cheeks with different hydration levels
Cited by: 48
Author(s): Hyo‐Jung Lee, Sang Eun Jeong, Soyoun Lee, Sung Woo Kim, Hyuntak Han, Che Ok Jeon
Software Mentions: 1
Published: almost 9 years ago
10.1038/s41598-020-60101-7
Toxicological response of the model fungus Saccharomyces cerevisiae to different concentrations of commercial graphene nanoplatelets
Cited by: 11
Author(s): María Suárez-Diez, Santiago Porras, Felix Laguna-Teno, Peter J. Schaap, Juan Antonio Tamayo-Ramos
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-60440-5
Clinical significance of circulating soluble immune checkpoint proteins in sorafenib-treated patients with advanced hepatocellular carcinoma
Cited by: 38
Author(s): Minh Phuong Dong, Masaru Enomoto, Lê Thị Thanh Thủy, Hai Hoang, Vu Ngoc Hieu, Dinh Viet Hoang, Ayako Iida‐Ueno, Naoshi Odagiri, Yuga Amano-Teranishi, Atsushi Hagihara, Hideki Fujii, Sawako Uchida‐Kobayashi, Norifumi Kawada
Software Mentions: 1
Published: over 6 years ago
10.3390/plants9060772
Cucumber Fruit Size and Shape Variations Explored from the Aspects of Morphology, Histology, and Endogenous Hormones
Cited by: 28
Author(s): Huan Liu, Yupeng Pan, Ce Liu, Yuanyuan Ding, Xiao Wang, Zhihui Cheng, Huanwen Meng
Software Mentions: 1
Published: over 6 years ago
10.1038/s42003-021-01655-8
Hallmarks of primary neurulation are conserved in the zebrafish forebrain
Cited by: 7
Author(s): Jonathan M. Werner, Maraki Y. Negesse, Dominique L. Brooks, Allyson R. Caldwell, Jafira M. Johnson, Rachel Brewster
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-60269-y
Cell surface GRP78 promotes stemness in normal and neoplastic cells
Cited by: 29
Author(s): Clay Conner, Tyson W. Lager, Ian H. Guldner, Min-Zu Wu, Yuriko Hishida, Tomoaki Hishida, Sergio Ruíz, Amanda E. Yamasaki, Robert Christopher Gilson, Juan Carlos Izpisúa Belmonte, Peter C. Gray, Jonathan A. Kelber, Siyuan Zhang, Athanasia D. Panopoulos
Software Mentions: 1
Published: over 6 years ago
10.1002/cam4.1064
Elevated glypican-1 expression is associated with an unfavorable prognosis in pancreatic ductal adenocarcinoma
Cited by: 83
Author(s): Haizhen Lu, Fangfei Niu, Fang Liu, Jiajia Gao, Yulin Sun, Xiaohang Zhao
Software Mentions: 1
Published: over 9 years ago
10.1038/s41598-020-60565-7
Type 2 diabetes mellitus compromises the survival of diffuse large B-cell lymphoma patients treated with (R)-CHOP – the PLRG report
Cited by: 9
Author(s): Joanna Drozd-Sokołowska, Jan Maciej Zaucha, Przemysław Biecek, Agnieszka Giza, Katarzyna Kobylińska, Monika Joks, Tomasz Wróbel, Beata Kumiega, Wanda Knopińska‐Posłuszny, Wojciech Spychałowicz, Joanna Romejko‐Jarosińska, Joanna Fischer, W Wiktor-Jedrzejczak, Monika Długosz‐Danecka, Sebastian Giebel, Wojciech Jurczak
Software Mentions: 1
Published: over 6 years ago
10.18632/oncotarget.25226
Differential prognostic impact of interleukin-34 mRNA expression and infiltrating immune cell composition in intrinsic breast cancer subtypes
Cited by: 32
Author(s): Karin Zins, Gerwin Heller, Mathias Mayerhofer, Martin Schreiber, Dietmar Abraham
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0221200
Covariates of diarrhoea among under-five children in India: Are they level dependent?
Cited by: 8
Author(s): Mala Ramanathan, Bevin Vijayan
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-020-60505-5
A Markov chain method for counting and modelling migraine attacks
Cited by: 6
Author(s): Mathias Barra, Fredrik A. Dahl, Kjersti Grøtta Vetvik, Anne MacGregor
Software Mentions: 1
Published: over 6 years ago
10.1038/s42003-020-1002-5
Single platelet variability governs population sensitivity and initiates intrinsic heterotypic responses
Cited by: 7
Author(s): Maaike S. A. Jongen, Ben D. MacArthur, Nicola A. Englyst, Jonathan West
Software Mentions: 1
Published: over 6 years ago
10.1002/cam4.2818
Identify potential clinical significance of long noncoding RNA forkhead box P4 antisense RNA 1 in patients with early stage pancreatic ductal adenocarcinoma
Cited by: 11
Author(s): Xiao‐Guang Liu, Hao Xu, Ming Chen, Xiaoyu Tan, Xiaofeng Chen, Yong‐Guang Yang, Manzhou Lin, Guohua Li, Xiangdang Liang, Yi‐Bin Qian, Guojia Yuan, Min‐Qiang Chen, Wentao Li, Huilai Miao, Mingyi Li, Xiwen Liao, Wei Dai, Nian‐Ping Chen
Software Mentions: 1
Published: over 6 years ago
10.3390/plants9111624
Advancements in Low-Chill Blueberry Vaccinium corymbosum L. Tissue Culture Practices
Cited by: 8
Author(s): Francesco Cappai, Alexandria Garcia, Ryan Cullen, Matthew Davis, Patricio Muńoz
Software Mentions: 1
Published: almost 6 years ago
10.1111/eva.13183
Heterogeneity of a dwarf phenotype in Dutch traditional chicken breeds revealed by genomic analyses
Cited by: 7
Author(s): Zhou Wu, Chiara Bortoluzzi, Martijn F.L. Derks, Langqing Liu, Mirte Bosse, S.J. Hiemstra, M.A.M. Groenen, R.P.M.A. Crooijmans
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0032146
Human Platelet-Rich Plasma- and Extracellular Matrix-Derived Peptides Promote Impaired Cutaneous Wound Healing In Vivo
Cited by: 56
Author(s): Tatiana N. Demidova-Rice, Lindsey N. Wolf, Jeffry Deckenback, Michael R. Hamblin, Ira M. Herman
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.pone.0204778
Optimization of T-DNA architecture for Cas9-mediated mutagenesis in Arabidopsis
Cited by: 80
Author(s): Baptiste Castel, Laurence Tomlinson, Federica Locci, Ying Yang, Jonathan D. G. Jones
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0211544
Understanding the prevalence of bear part consumption in Cambodia: A comparison of specialised questioning techniques
Cited by: 25
Author(s): Elizabeth Davis, Brian Crudge, Thona Lim, D.A. O'Connor, Vichet Roth, Matt Hunt, Jenny Anne Glikman
Software Mentions: 1
Published: over 7 years ago
10.3389/fnagi.2020.576627
Graph Theory Analysis Reveals Resting-State Compensatory Mechanisms in Healthy Aging and Prodromal Alzheimer’s Disease
Cited by: 26
Author(s): Qumars Behfar, Stefan Kambiz Behfar, Boris von Reutern, Nils Richter, Julian Dronse, Ronja Fassbender, Gereon R. Fink, Oezguer A. Onur
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-61050-x
Highly regional population structure of Spondyliosoma cantharus depicted by nuclear and mitochondrial DNA data
Cited by: 3
Author(s): Ana Neves, Alberto Vieira, Vera Sequeira, Rafaela Barros Paiva, Leonel Serrano Gordo, Octávio S. Paulo
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules24152828
Variability of Bioactive Glucosinolates, Isothiocyanates and Enzyme Patterns in Horseradish Hairy Root Cultures Initiated from Different Organs
Cited by: 9
Author(s): Regina Bertóti, Andrea Böszörményi, Ágnes Alberti, Szabolcs Béni, Márta M-Hamvas, Éva Szőke, Gábor Vasas, Sándor Gonda
Software Mentions: 1
Published: about 7 years ago
10.3389/fcell.2020.601502
Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer
Cited by: 5
Author(s): Hantao Wang, Junjie Xing, Wei Wang, Gui‐Fen Lv, Haiyan He, Yeqing Lu, Mei Sun, Haiyan Chen, Xu Li
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-60504-6
Western gorilla space use suggests territoriality
Cited by: 10
Author(s): Robin E. Morrison, Jacob C. Dunn, Germán Illera, Peter Walsh, Magdalena Bermejo
Software Mentions: 1
Published: over 6 years ago
10.3389/fcell.2020.618598
Secreted Phosphoprotein 1 Expression in Retinal Mononuclear Phagocytes Links Murine to Human Choroidal Neovascularization
Cited by: 20
Author(s): Anja Schlecht, Peipei Zhang, Julian Wolf, Adrian Thien, Dennis-Dominik Rosmus, Stefaniya Boneva, Günther Schlunck, Clemens Lange, Peter Wieghofer
Software Mentions: 1
Published: over 5 years ago
10.1007/s00401-018-1825-z
Diffuse gliomas classified by 1p/19q co-deletion, TERT promoter and IDH mutation status are associated with specific genetic risk loci
Cited by: 39
Author(s): Karim Labreche, Ben Kinnersley, Giulia Berzero, Anna Luisa Di Stefano, Amithys Rahimian, Inès Detrait, Yannick Marie, Benjamin Grenier‐Boley, Khê Hoang‐Xuan, Jean‐Yves Delattre, Ahmed Idbaïh, Richard S. Houlston, Marc Sanson
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0052746
Dried Whole Plant Artemisia annua as an Antimalarial Therapy
Cited by: 89
Author(s): Mostafa A. Elfawal, Melissa J. Towler, Nicholas G. Reich, Douglas T. Golenbock, Pamela J. Weathers, Stephen M. Rich
Software Mentions: 1
Published: almost 14 years ago
10.1371/journal.pone.0103934
Improvement of Prediction Ability for Genomic Selection of Dairy Cattle by Including Dominance Effects
Cited by: 71
Author(s): Chuanyu Sun, P.M. VanRaden, J.B. Cole, Jeffrey R. O’Connell
Software Mentions: 1
Published: about 12 years ago
10.1186/s12859-021-04034-6
PnB Designer: a web application to design prime and base editor guide RNAs for animals and plants
Cited by: 180
Author(s): Sebastian M. Siegner, Mehmet E. Karasu, Markus S. Schröder, Zacharias Kontarakis, Jacob E. Corn
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-62189-3
Integrative analyses indicate an association between ITIH3 polymorphisms with autism spectrum disorder
Cited by: 5
Author(s): Xinyan Xie, Heng Meng, Hao Wu, Fang Hou, Yanlin Chen, Yu Zhou, Xue Qin, Jiajia Zhang, Jianhua Gong, Li Li, Ranran Song
Software Mentions: 1
Published: over 6 years ago
10.3390/molecules26195808
Optimization of HS-SPME for GC-MS Analysis and Its Application in Characterization of Volatile Compounds in Sweet Potato
Cited by: 14
Author(s): Rong Zhang, Cuiming Tang, Biao Jiang, Xueying Mo, Zhangying Wang
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-020-62187-5
Human health risk assessment of elevated and variable iron and manganese intake with arsenic-safe groundwater in Jashore, Bangladesh
Cited by: 71
Author(s): Gopal Chandra Ghosh, Md. Jahed Hassan Khan, Tapos Kumar Chakraborty, Samina Zaman, A. H. M. Enamul Kabir, Hiroaki Tanaka
Software Mentions: 1
Published: over 6 years ago
10.1186/s13024-021-00478-9
Functional microRNA targetome undergoes degeneration-induced shift in the retina
Cited by: 10
Author(s): Joshua Chu-Tan, Adrian V. Cioanca, Zhiping Feng, Yvette Wooff, Ulrike Schümann, Riemke Aggio-Bruce, Hardip R. Patel, Matt Rutar, Katherine M. Hannan, Kostya I. Panov, Jan Provis, Riccardo Natoli
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0237701
Evaluating the capacity of species distribution modeling to predict the geographic distribution of the mangrove community in Mexico
Cited by: 14
Author(s): Karla Rodríguez-Medina, Carlos Yáñez‐Arenas, A. Townsend Peterson, Jorge Euán Ávila, Jorge A. Herrera-Silveira
Software Mentions: 1
Published: about 6 years ago
10.3389/fcell.2021.652466
And Then There Were Three…: Extreme Regeneration Ability of the Solitary Chordate Polycarpa mytiligera
Cited by: 14
Author(s): Tal Gordon, Arnav Kumar Upadhyay, Lucia Manni, Dorothée Huchon, Noa Shenkar
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-62476-z
Characterisation of the dynamic nature of lipids throughout the lifespan of genetically identical female and male Daphnia magna
Cited by: 4
Author(s): Julia K. Constantinou, Andrew D. Southam, Jouni Kvist, Steven J.M. Jones, Mark R. Viant, Leda Mirbahai
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.10775
Systematics of ‘lithistid’ tetractinellid demosponges from the Tropical Western Atlantic—implications for phylodiversity and bathymetric distribution
Cited by: 8
Author(s): Astrid Schuster, Shirley A. Pomponi, Andrzej Pisera, Paco Cárdenas, Michelle Kelly, Gert Wörheide, Dirk Erpenbeck
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms21186872
Systematic Analysis of Cold Stress Response and Diurnal Rhythm Using Transcriptome Data in Rice Reveals the Molecular Networks Related to Various Biological Processes
Cited by: 7
Author(s): Woo‐Jong Hong, Jiang Xu, Hye Ryun Ahn, Juyoung Choi, Seong-Ryong Kim, Ki‐Hong Jung
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0156147
Near-Bottom Hypoxia Impacts Dynamics of Bacterioplankton Assemblage throughout Water Column of the Gulf of Finland (Baltic Sea)
Cited by: 8
Author(s): Peeter Laas, Elina Šatova, Inga Lips, Urmas Lips, Jaak Simm, Veljo Kisand, Madis Metsis
Software Mentions: 1
Published: over 10 years ago
10.1038/s42003-021-01873-0
The catalytic subunit of Plasmodium falciparum casein kinase 2 is essential for gametocytogenesis
Cited by: 6
Author(s): Eva Hitz, Olivia Grüninger, Armin Passecker, Matthias T. Wyss, Christian Scheurer, Sergio Wittlin, H. P. Beck, Nicolas M. B. Brancucci, Till S. Voss
Software Mentions: 1
Published: over 5 years ago
10.1038/s42003-021-01767-1
A versatile microfluidic platform measures hyphal interactions between Fusarium graminearum and Clonostachys rosea in real-time
Cited by: 11
Author(s): Alejandro Gimeno, Claire E. Stanley, Zacharie Ngamenie, Ming-Hui Hsung, Florian Walder, Stefanie S. Schmieder, Saskia Bindschedler, Pilar Junier, Beat Keller, Susanne Vogelgsang
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pbio.3000632
A widespread family of heat-resistant obscure (Hero) proteins protect against protein instability and aggregation
Cited by: 44
Author(s): Kaoru Tsuboyama, Tatsuya Osaki, Eriko Matsuura-Suzuki, Hiroko Kozuka‐Hata, Yuki Okada, Masaaki Oyama, Yoshiho Ikeuchi, Shigeo Iwasaki, Yukihide Tomari
Software Mentions: 1
Published: over 6 years ago
10.3389/fnagi.2019.00293
Proteome Profiling of Cerebral Vessels in Rhesus Macaques: Dysregulation of Antioxidant Activity and Extracellular Matrix Proteins Contributes to Cerebrovascular Aging in Rhesus Macaques
Cited by: 8
Author(s): Xia Wang, Yifan Liu, Yangjie Jia, Haotian Liu, Xinjie Bao, Zhanlong He, Wei Ge
Software Mentions: 1
Published: about 7 years ago
10.3390/ijms21093088
Genome-Wide Identification and Characterization of UTR-Introns of Citrus sinensis
Cited by: 4
Author(s): Xiaobao Shi, Junwei Wu, Raphael Anue Mensah, Na Tian, Jiapeng Liu, Fan Liu, Jialan Chen, Jing-Ru Che, Yifeng Guo, Binghua Wu, Guoqiang Zhong, Chunzhen Cheng
Software Mentions: 1
Published: over 6 years ago
10.1038/s42003-021-02548-6
Cellular 3D-reconstruction and analysis in the human cerebral cortex using automatic serial sections
Cited by: 5
Author(s): Nick Yin Larsen, Xixia Li, Xueke Tan, Gang Ji, Jing Lin, Grażyna Rajkowska, Jesper Møller, Ninna Vihrs, Jon Sporring, Fei Sun, Jens Randel Nyengaard
Software Mentions: 1
Published: about 5 years ago
10.7717/peerj.8786
Identification of core genes associated with prostate cancer progression and outcome via bioinformatics analysis in multiple databases
Cited by: 14
Author(s): Yutao Wang, Jianfeng Wang, Kexin Yan, Jiaxing Lin, Zhenhua Zheng, Jianbin Bi
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2019.00160
Diversity and Distribution of Sulfur Oxidation-Related Genes in Thioalkalivibrio, a Genus of Chemolithoautotrophic and Haloalkaliphilic Sulfur-Oxidizing Bacteria
Cited by: 43
Author(s): Tom Berben, Lex Overmars, Dimitry Y. Sorokin, Gerard Muyzer
Software Mentions: 1
Published: over 7 years ago
10.1128/mSystems.01292-20
Mycobacteria Tolerate Carbon Monoxide by Remodeling Their Respiratory Chain
Cited by: 5
Author(s): Katherine Bayly, Paul R. F. Cordero, Ashleigh Kropp, Cheng Huang, Ralf B. Schittenhelm, Rhys Grinter, Chris Greening
Software Mentions: 1
Published: over 5 years ago