cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1155/2021/9980949

Investigating the Multitarget Pharmacological Mechanism of Ursolic Acid Acting on Colon Cancer: A Network Pharmacology Approach
Cited by: 5
Author(s): Jun Zhao, Ping Leng, Wen Xu, Jialin Sun, Beibei Ni, Guang-Wei Liu
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-48400-0

Microridges are apical epithelial projections formed of F-actin networks that organize the glycan layer
Cited by: 29
Author(s): Clyde Savio Pinto, Ameya Khandekar, Rajasekaran Bhavna, Petra Kiesel, Gaia Pigino, Mahendra Sonawane
Software Mentions: 1
Published: about 7 years ago

10.1186/s13071-021-04945-6

Modelling bluetongue risk in Kazakhstan
Cited by: 1
Author(s): Sarsenbay Abdrakhmanov, Kanatzhan K. Beisembayev, Akhmetzhan A. Sultanov, Yersyn Y. Mukhanbetkaliyev, Ablaikhan Kadyrov, Altay Ussenbayev, Аigerim Zhakenova, Paul R. Torgerson
Software Mentions: 1
Published: about 5 years ago

10.1111/pce.13542

A high‐throughput transient expression system for rice
Cited by: 37
Author(s): Mike T. Page, M. A. J. Parry, Elizabete Carmo‐Silva
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2020.609600

Regulation of Exocyst Function in Pollen Tube Growth by Phosphorylation of Exocyst Subunit EXO70C2
Cited by: 4
Author(s): Antonietta Saccomanno, Martin Potocký, Přemysl Pejchar, Michal Hála, Hiromasa Shikata, Claus Schwechheimer, Viktor Žárský
Software Mentions: 1
Published: almost 6 years ago

10.3390/md19050268

Diet Supplementation with Fish-Derived Extracts Suppresses Diabetes and Modulates Intestinal Microbiome in a Murine Model of Diet-Induced Obesity
Cited by: 4
Author(s): Konstantinos Axarlis, Maria Daskalaki, Sofia Michailidou, Nikolais Androulaki, Antiopi Tsoureki, Evangelia Mouchtaropoulou, Ourania Kolliniati, Ioanna Lapi, Eirini Dermitzaki, Maria Venihaki, Katerina Kousoulaki, Anagnostis Argiriou, Zouhir El Marsni, Christos Tsatsanis
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-48706-z

Combining ZooMS and zooarchaeology to study Late Pleistocene hominin behaviour at Fumane (Italy)
Cited by: 39
Author(s): Virginie Sinet‐Mathiot, Geoff Smith, Matteo Romandini, Arndt Wilcke, Marco Peresani, Jean‐Jacques Hublin, Frido Welker
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-016-3062-y

Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes
Cited by: 4
Author(s): Kátia de Paiva Lopes, Francisco J. Campos‐Laborie, Ricardo Assunção Vialle, José Miguel Ortega, Javier De Las Rivas
Software Mentions: 1
Published: about 10 years ago

10.7717/peerj.11008

Low compositions of human toll-like receptor 7/8-stimulating RNA motifs in the MERS-CoV, SARS-CoV and SARS-CoV-2 genomes imply a substantial ability to evade human innate immunity
Cited by: 2
Author(s): Cheng Yang, Mei Fang Chen
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2020.00601

Soil Sickness in Aged Tea Plantation Is Associated With a Shift in Microbial Communities as a Result of Plant Polyphenol Accumulation in the Tea Gardens
Cited by: 47
Author(s): Yasir Arafat, Israr Ud Din, Muhammad Tayyab, Yuhang Jiang, Ting Cui, Zhaoying Cai, Hao Zhao, Xiangmin Lin, Wenxiong Lin, Shan Lin
Software Mentions: 1
Published: over 6 years ago

10.1186/s40478-021-01233-3

Predictors of cognitive impairment in primary age-related tauopathy: an autopsy study
Cited by: 25
Author(s): Megan A. Iida, Kurt Farrell, Jamie M. Walker, Timothy E. Richardson, Gabriel A. Marx, Clare Bryce, Dushyant P. Purohit, Gai Ayalon, Thomas G. Beach, Eileen H. Bigio, Etty Cortés, Marla Gearing, Vahram Haroutunian, Corey T. McMillan, Edward B. Lee, Dennis W. Dickson, Ann C. McKee, Thor D. Stein, John Q. Trojanowski, Randall L. Woltjer, Gábor G. Kovács, Julia Kofler, Jeffrey Kaye, Charles L. White, John F. Crary
Software Mentions: 1
Published: about 5 years ago

10.1002/pld3.206

Differential role of MAX2 and strigolactones in pathogen, ozone, and stomatal responses
Cited by: 19
Author(s): Maria Kalliola, Liina Jakobson, Pär Davidsson, Ville Pennanen, Cezary Waszczak, Dmitry Yarmolinsky, Olena Zamora, E. Tapio Palva, Tarja Kariola, Hannes Kollist, Mikael Brosché
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pntd.0005624

Radiological evolution of porcine neurocysticercosis after combined antiparasitic treatment with praziquantel and albendazole
Cited by: 7
Author(s): Carla Cangalaya, Javier A. Bustos, Juan Calcina, Ana Vargas-Calla, Javier Mamani, Diego Suarez, Gianfranco Arroyo, Armando E. González, Juan Chacaltana, Cristina Guerra‐Giraldez, Siddhartha Mahanty, Theodore E. Nash, Héctor H. Garcı́a
Software Mentions: 1
Published: over 9 years ago

10.3390/antibiotics9110728

The Potential of Plant-Based Bioactive Compounds on Inhibition of Aflatoxin B1 Biosynthesis and Down-regulation of aflR, aflM and aflP Genes
Cited by: 16
Author(s): Nassim Safari, Mehran Mirabzadeh Ardakani, Roghayeh Hemmati, Alessia Parroni, Marzia Beccaccioli, Massimo Reverberi
Software Mentions: 1
Published: about 6 years ago

10.3390/ma12233932

Biocompatibility Investigation of Hybrid Organometallic Polymers for Sub-Micron 3D Printing via Laser Two-Photon Polymerisation
Cited by: 6
Author(s): Evaldas Balčiūnas, Nadežda Dreižė, Monika Grubliauskaitė, Silvija Urnikytė, Egidijus Šimoliūnas, Virginija Bukelskienė, Mindaugas Valius, Sara J. Baldock, John G. Hardy, Daiva Baltriukienė
Software Mentions: 1
Published: almost 7 years ago

10.3390/ma13173802

Margin Integrity of Bulk-Fill Composite Restorations in Primary Teeth
Cited by: 14
Author(s): Alina Paganini, Thomas Attin, Tobias T. Tauböck
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-49702-z

Evaluation of (−)-epicatechin metabolites as recovery biomarker of dietary flavan-3-ol intake
Cited by: 18
Author(s): Javier I. Ottaviani, Reedmond Y. Fong, Jennifer Kimball, Jodi L. Ensunsa, Nicola Gray, Anna Vogiatzoglou, Abigail Britten, Debora Lucarelli, Robert Luben, Philip B. Grace, Deborah H. Mawson, Amy Tym, Antonia Wierzbicki, A. D. Smith, Nicholas J. Wareham, Nita G. Forouhi, Kay‐Tee Khaw, Hagen Schroeter, Gunter Georg Kuhnle
Software Mentions: 1
Published: about 7 years ago

10.1186/s13071-021-04604-w

High-elevational occurrence of two tick species, Ixodes ricinus and I. trianguliceps, at their northern distribution range
Cited by: 12
Author(s): Nicolas De Pelsmaeker, Lars Korslund, Øyvind Steifetten
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-49497-z

The effect of 2′-fucosyllactose on simulated infant gut microbiome and metabolites; a pilot study in comparison to GOS and lactose
Cited by: 58
Author(s): Krista Salli, Heli Anglenius, Johanna Hirvonen, Ashley A. Hibberd, Ilmari Ahonen, Markku Saarinen, Kirsti Tiihonen, Johanna Maukonen, Arthur C. Ouwehand
Software Mentions: 1
Published: about 7 years ago

10.1007/s11060-017-2418-8

Does early resection of presumed low-grade glioma improve survival? A clinical perspective
Cited by: 34
Author(s): Maarten M.J. Wijnenga, Tariq Mattni, Pim J. French, Geert-Jan Rutten, Sieger Leenstra, Fred Kloet, Martin J.B. Taphoorn, Martin J. van den Bent, Clemens Dirven, Marie-Lise van Veelen, Arnaud Vincent
Software Mentions: 1
Published: over 9 years ago

10.1002/ps.6206

Lifecycle of the invasive omnivore, <scp> Forficula auricularia </scp> , in Australian grain growing environments
Cited by: 8
Author(s): Matthew Binns, Ary A. Hoffmann, M. van Helden, Thomas Heddle, Matthew P. Hill, Sarina Macfadyen, M. Nash, Paul A Umina
Software Mentions: 1
Published: almost 6 years ago

10.1007/s11060-018-2867-8

Prognostic relevance of mutations and copy number alterations assessed with targeted next generation sequencing in IDH mutant grade II glioma
Cited by: 22
Author(s): Maarten M.J. Wijnenga, Pim J. French, Hendrikus J. Dubbink, Winand N.M. Dinjens, Peggy N. Atmodimedjo, Johan M. Kros, Ruth Fleischeuer, Clemens Dirven, Arnaud Vincent, Martin J. van den Bent
Software Mentions: 1
Published: over 8 years ago

10.1007/s40037-018-0481-2

Validity evidence for programmatic assessment in competency-based education
Cited by: 30
Author(s): Harold G. J. Bok, Lubberta H. de Jong, Thomas A. O’Neill, Connor Maxey, Kent Hecker
Software Mentions: 1
Published: almost 8 years ago

10.3390/molecules24071445

In Silico Investigation of the Anti-Tumor Mechanisms of Epigallocatechin-3-Gallate
Cited by: 17
Author(s): Wang Wang, Xiuhong Xiong, Xue Li, Qinyang Zhang, Wentao Yang, Linfang Du
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2020.00387

Water Stable Isotopes in Ecohydrological Field Research: Comparison Between In Situ and Destructive Monitoring Methods to Determine Soil Water Isotopic Signatures
Cited by: 22
Author(s): Angelika Kübert, Sinikka Paulus, Adrian Dahlmann, Christiane Werner, Youri Rothfuss, Natalie Orlowski, Maren Dubbert
Software Mentions: 1
Published: over 6 years ago

10.1002/pld3.91

ShinyAIM: Shiny-based application of interactive Manhattan plots for longitudinal genome-wide association studies
Cited by: 5
Author(s): Waseem Hussain, Malachy T. Campbell, Harkamal Walia, Gota Morota
Software Mentions: 1
Published: about 8 years ago

10.3389/fpls.2021.696229

Chromosome Level Assembly of Homozygous Inbred Line ‘Wongyo 3115’ Facilitates the Construction of a High-Density Linkage Map and Identification of QTLs Associated With Fruit Firmness in Octoploid Strawberry (Fragaria × ananassa)
Cited by: 10
Author(s): Hye-Eun Lee, Abinaya Manivannan, Sun Yi Lee, Koeun Han, Jun-Geol Yeum, Jinkwan Jo, Jinhee Kim, Il Rae Rho, Ye Rin Lee, Eun Su Lee, Byoung‐Cheorl Kang, Do-Sun Kim
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2020.00643

Stomata and Sporophytes of the Model Moss Physcomitrium patens
Cited by: 10
Author(s): Robert S. Caine, Caspar Chater, Andrew J. Fleming, Julie E. Gray
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-021-07569-3

Removal of beneficial insertion effects prevent the long-term persistence of transposable elements within simulated asexual populations
Cited by: 2
Author(s): Christopher L. Butler, Ellen Bell, Martin I. Taylor
Software Mentions: 1
Published: over 5 years ago

10.1002/mgg3.536

Molecular diagnosis of somatic overgrowth conditions: A single‐center experience
Cited by: 25
Author(s): Emilie Lalonde, Jessica Ebrahimzadeh, Keith Rafferty, Jennifer Richards‐Yutz, Richard Grant, Erik Toorens, Jennifer Marie Rosado, Erica Schindewolf, Tapan Ganguly, Jennifer M. Kalish, Matthew A. Deardorff, Arupa Ganguly
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2021.637190

Quantitative High-Throughput, Real-Time Bioassay for Plant Pathogen Growth in vivo
Cited by: 2
Author(s): Chunqiu Zhang, Ben N. Mansfeld, Ying-Zu Lin, Rebecca Grumet
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0153009

Sphingosine-1-Phosphate Lyase Deficient Cells as a Tool to Study Protein Lipid Interactions
Cited by: 36
Author(s): Mathias J. Gerl, Verena Bittl, Susanne Kirchner, Timo Sachsenheimer, Hanna L. Brunner, Christian Lüchtenborg, Cagakan Özbalci, Hannah Wiedemann, Sabine Wegehingel, Walter Nickel, Per Haberkant, Carsten Schultz, Marcus Krüger, Britta Brügger
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-019-50763-3

Investigation of the Guinea fowl and domestic fowl hybrids as potential surrogate hosts for avian cryopreservation programmes
Cited by: 8
Author(s): Mariann Molnár, Bence Lázár, Nikoletta Sztán, Barbara Végi, Árpád Drobnyák, Roland Tóth, Krisztina Liptói, Miklós Marosán, Elen Gócza, Sunil Nandi, Michael J. McGrew, Eszter Patakiné Várkonyi
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-021-07822-9

Integrative analysis of histomorphology, transcriptome and whole genome resequencing identified DIO2 gene as a crucial gene for the protuberant knob located on forehead in geese
Cited by: 4
Author(s): Yan Deng, Shiyan Hu, Chenglong Luo, Qingyuan Ouyang, Li Li, Jiaming Ma, Zhenping Lin, Junpeng Chen, Hehe Liu, Jiwei Hu, Guohong Chen, Dingming Shu, Yuxuan Pan, Bo Hu, Hua He, Hao Qu, Jiwen Wang
Software Mentions: 1
Published: over 5 years ago

10.1002/pld3.116

ARF5/MONOPTEROS directly regulates miR390 expression in theArabidopsis thalianaprimary root meristem
Cited by: 27
Author(s): Mouli Ghosh Dastidar, Andréa Scarpa, Ira Mägele, Paola Ruiz-Duarte, Patrick von Born, Lotte Bald, Virginie Jouannet, Alexis Maizel
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0115626

Reducing Uncertainty in the American Community Survey through Data-Driven Regionalization
Cited by: 61
Author(s): Seth E. Spielman, David C. Folch
Software Mentions: 1
Published: over 11 years ago

10.7717/peerj.4364

Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium® HD SNP BeadChip
Cited by: 13
Author(s): Joshua M. Miller, Marco Festa‐Bianchet, David W. Coltman
Software Mentions: 1
Published: over 8 years ago

10.1097/MD.0000000000023390

Clinical effect of catgut implantation at acupoints for the treatment of simple obesity
Cited by: 3
Author(s): Xia Chen, Wei Huang, Dan Wei, De-Guang Ding, Jiao Yang, Hong-Ling Pan, Yingxue Jin, Yi-Wei Zheng, Yanji Zhang, Yingrong Zhang, Yiran Liu, Zhongyu Zhou
Software Mentions: 1
Published: almost 6 years ago

10.1097/MD.0000000000015804

Prognostic nomogram for adult patients with acute myeloid leukemia
Cited by: 5
Author(s): Cunte Chen, Peipei Wang, Caixia Wang
Software Mentions: 1
Published: over 7 years ago

10.1007/s10456-018-9642-5

Activin receptor-like kinase 1 is associated with immune cell infiltration and regulates CLEC14A transcription in cancer
Cited by: 38
Author(s): Matteo Bocci, Jonas Sjölund, Ewa Kurzejamska, David Lindgren, Nour Al Dain Marzouka, Michael Bartoschek, Mattias Höglund, Kristian Pietras
Software Mentions: 1
Published: about 8 years ago

10.1002/ece3.5237

Genetic diversity, admixture, and hatchery influence in Brook Trout (Salvelinus fontinalis) throughout western New York State
Cited by: 14
Author(s): Stephanie Dowell Beer, Scott Cornett, Peter Austerman, Betsy Trometer, Thomas Hoffman, Meredith L. Bartron
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-51240-7

Functional analysis and development of a CRISPR/Cas9 allelic series for a CPR5 ortholog necessary for proper growth of soybean trichomes
Cited by: 21
Author(s): Ben Campbell, Jacob W. Hoyle, Bruna Bucciarelli, Adrian O. Stec, Deborah A. Samac, W. A. Parrott, Robert M. Stupar
Software Mentions: 1
Published: about 7 years ago

10.3389/fphys.2019.00572

Metformin Monotherapy Downregulates Diabetes-Associated Inflammatory Status and Impacts on Mortality
Cited by: 24
Author(s): Anteneh Mehari Tizazu, Ma Shwe Zin Nyunt, Olivier Cexus, Koolarina Suku, Esther Wing Hei Mok, Chin Hui Xian, Joni Chong, Crystal Tze Ying Tan, Wilson How, Sandra Hubert, Emilie Combet, Tamàs Fülöp, Tze Pin Ng, Anis Larbi
Software Mentions: 1
Published: over 7 years ago

10.3390/ani11082208

Epidemiology, Genetic Characterization, and Pathogenesis of Avian Influenza H5N8 Viruses Circulating in Northern and Southern Parts of Egypt, 2017–2019
Cited by: 11
Author(s): Mohamed Tarek, Mahmoud M. Naguib, Abdel Satar Arafa, Laila Tantawy, Karim Selim, Shaimaa Talaat, Hesham Sultan
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21218218

Defining Metaniches in the Oral Cavity According to Their Microbial Composition and Cytokine Profile
Cited by: 15
Author(s): Corinna L Seidel, Roman G. Gerlach, Patrick Wiedemann, Matthias Weider, Gabriele Rodrian, Michael Häder, Benjamin Frey, Udo S. Gaipl, Aline Bözec, Fabian Cieplik, Christian Kirschneck, Christian Bogdan, Lina Gölz
Software Mentions: 1
Published: almost 6 years ago

10.1111/tpj.14648

Parental origin of the allotetraploid tobacco Nicotiana benthamiana
Cited by: 26
Author(s): Matteo Schiavinato, Marina Marcet‐Houben, Juliane C. Dohm, Toni Gabaldón, Heinz Himmelbauer
Software Mentions: 1
Published: almost 7 years ago

10.1002/ece3.2399

Heterotrophy mitigates the response of the temperate coral Oculina arbuscula to temperature stress
Cited by: 25
Author(s): Hannah E. Aichelman, Joseph E. Townsend, Travis A. Courtney, Justin H. Baumann, Sarah W. Davies, Karl D. Castillo
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-019-51612-z

Tracking genome-editing and associated molecular perturbations by SWATH mass spectrometry
Cited by: 9
Author(s): Qifeng Lin, Larry W. L. Low, Adam Lau, Chua Wee Ling Esther, Yuji Matsuoka, Yilong Lian, Antόnia Monteiro, Stephen Tate, Jayantha Gunaratne, Thomas J. Carney
Software Mentions: 1
Published: about 7 years ago

10.1186/s10020-020-00160-8

Neonatal hair profiling reveals a metabolic phenotype of monochorionic twins with selective intrauterine growth restriction and abnormal umbilical artery flow
Cited by: 11
Author(s): Jing Yang, Wei Yuan, Hongbo Qi, Ning Yin, Yang Yang, Zailing Li, Lili Xu, Xueju Wang, Pengbo Yuan, Luyao Li, Ting-Li Han, Yangyu Zhao
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-51990-4

Functional connectivity of music-induced analgesia in fibromyalgia
Cited by: 17
Author(s): Victor Pando‐Naude, Fernando A. Barrios, Sarael Alcauter, Erick H. Pasaye, Lene Vase, Elvira Brattico, Peter Vuust, Eduardo A. Garza‐Villarreal
Software Mentions: 1
Published: about 7 years ago

10.3389/fphys.2021.663023

Transcriptomics Analysis and Re-sequencing Reveal the Mechanism Underlying the Thermotolerance of an Artificial Selection Population of the Pacific Oyster
Cited by: 7
Author(s): Yulong Tan, Rong Cong, Hongsheng Qi, Luping Wang, Guofan Zhang, Ying Pan, Li Li
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-017-3782-7

Comparative genomics of Eucalyptus and Corymbia reveals low rates of genome structural rearrangement
Cited by: 24
Author(s): Jakob B. Butler, René E. Vaillancourt, Brad M. Potts, D. J. Lee, Graham J. King, Abdul Baten, Mervyn Shepherd, Jules S. Freeman
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms22105247

BMAL1 Knockdown Leans Epithelial–Mesenchymal Balance toward Epithelial Properties and Decreases the Chemoresistance of Colon Carcinoma Cells
Cited by: 17
Author(s): Yuan Zhang, Aurore Devocelle, Christophe Desterke, Lucas Eduardo Botelho de Souza, Éva Hadadi, Hervé Acloque, Adlen Foudi, Xiang Yao, Annabelle Ballesta, Yunhua Chang, Julien Giron‐Michel
Software Mentions: 1
Published: over 5 years ago

10.3390/nu12051256

Hospital Regimens Including Probiotics Guide the Individual Development of the Gut Microbiome of Very Low Birth Weight Infants in the First Two Weeks of Life
Cited by: 15
Author(s): Stefan Kurath‐Koller, Charlotte Neumann, Christine Moissl-Eichinger, Raimund Kraschl, Claudia Kanduth, Barbara Hopfer, Manuela-Raluca Pausan, Berndt Urlesberger, Bernhard Resch
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-15-870

Diversification of the C-TERMINALLY ENCODED PEPTIDE (CEP) gene family in angiosperms, and evolution of plant-family specific CEP genes
Cited by: 59
Author(s): Huw A. Ogilvie, Nijat Imin, Michael A. Djordjevic
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-019-52473-2

Synergistic Antibacterial Effects of Metallic Nanoparticle Combinations
Cited by: 132
Author(s): Claire Bankier, Mohan Edirisinghe, Yuen-Ki Cheong, Guogang Ren, Elaine Cloutman-Green, Lena Ciric
Software Mentions: 1
Published: almost 7 years ago

10.1007/s00795-020-00277-z

Quantitative volumetric analysis of the Golgi apparatus following X-ray irradiation by super-resolution 3D-SIM microscopy
Cited by: 1
Author(s): Takahiro Oike, Yuki Uchihara, Tiara Bunga Mayang Permata, Soehartati Gondhowiardjo, Tatsuya Ohno, Atsushi Shibata
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12864-020-07145-1

Genome of the four-finger threadfin Eleutheronema tetradactylum (Perciforms: Polynemidae)
Cited by: 3
Author(s): Zhe Qu, Wenyan Nong, Yifei Yu, Tobias Baril, Ho Yin Yip, Alexander Hayward, Jerome H. L. Hui
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0080347

First Partial Skeleton of a 1.34-Million-Year-Old Paranthropus boisei from Bed II, Olduvai Gorge, Tanzania
Cited by: 135
Author(s): Manuel Domı́nguez-Rodrigo, Travis Rayne Pickering, Enrique Baquedano, Audax Mabulla, Darren F. Mark, Charles M. Musiba, Henry T. Bunn, David Uribelarrea, Vicki Smith, Fernando Diéz Martín, Alfredo Pérez‐González, Policarpo Sánchez, Manuel Santonja, Doris Barboni, Agness Gidna, Gail M. Ashley, José Yravedra, Jason L. Heaton, María Carmen Arriaza
Software Mentions: 1
Published: almost 13 years ago

10.3389/fphys.2018.00878

A Mechanistic Computational Model Reveals That Plasticity of CD4+ T Cell Differentiation Is a Function of Cytokine Composition and Dosage
Cited by: 31
Author(s): Bhanwar Lal Puniya, Robert G. Todd, Akram Mohammed, Deborah M. Brown, Matteo Barberis, Tomáš Helikar
Software Mentions: 1
Published: about 8 years ago

10.1186/s13007-020-00677-3

A heat-shock inducible system for flexible gene expression in cereals
Cited by: 5
Author(s): Sophie A Harrington, Anna E Backhaus, Samantha Fox, Christian Rogers, Philippa Borrill, Cristóbal Uauy, Annis Richardson
Software Mentions: 1
Published: about 6 years ago

10.1590/0074-02760180332

First isolation of West Nile virus in Brazil
Cited by: 30
Author(s): Livia Carício Martins, Eliana Vieira Pinto da Silva, Lívia Medeiros Neves Casseb, Sandro Patroca da Silva, Ana Cecília Ribeiro Cruz, Jamilla Augusta de Sousa Pantoja, Daniele Barbosa de Almeida Medeiros, Arnaldo Jorge Martins Filho, Ermelinda do Rosário Moutinho da Cruz, Marialva Tereza Ferreira de Araújo, Jedson Ferreira Cardoso, Marcos Antônio Correia Rodrigues da Cunha, Gilton Luiz Almada, Alessandro Romano, Maria Guadalupe Dias Pestana Santos, Gilsa Aparecida Pimenta Rodrigues, Jannifer Oliveira Chiang, Juarez Antônio Simões Quaresma, Valéria Lima Carvalho, Pedro Fernando da Costa Vasconcelos
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijms22105183

Biophysical and Biochemical Comparison of Extracellular Vesicles Produced by Infective and Non-Infective Stages of Trypanosoma cruzi
Cited by: 16
Author(s): Lissette Retana Moreira, Alexa Prescilla-Ledezma, Alberto Cornet-Gómez, Fernando Gervilla Linares, Ana Belén Jódar-Reyes, Jorge I. González Fernández, Ana Karina Ibarrola Vannucci, Luis Miguel De Pablos, Antonio Osuna
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-53554-y

Membrane-bound Gaussia luciferase as a tool to track shedding of membrane proteins from the surface of extracellular vesicles
Cited by: 16
Author(s): Mikołaj Zaborowski, Pike See Cheah, Xuan Zhang, Isabella Bushko, Kyungheon Lee, Alessandro Sammarco, Valentina Zappulli, Sybren L. N. Maas, Ryan M. Allen, Purva Rumde, Bence György, Massimo Aufiero, Markus Schweiger, Charles P. Lai, Ralph Weissleder, Hakho Lee, Kasey C. Vickers, Bakhos A. Tannous, Xandra O. Breakefield
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12864-015-1536-y

A novel member of the let-7 microRNA family is associated with developmental transitions in filarial nematode parasites
Cited by: 26
Author(s): Alan D. Winter, Victoria Gillan, Kirsty Maitland, Richard D. Emes, Brett Roberts, Gillian McCormack, William Weir, Anna V. Protasio, Nancy Holroyd, Matthew Berriman, Collette Britton, Eileen Devaney
Software Mentions: 1
Published: over 11 years ago

10.3389/fphys.2020.615025

Regulation of Peroxisome Proliferator-Activated Receptor Pathway During Torpor in the Garden Dormouse, Eliomys quercinus
Cited by: 3
Author(s): A. Watts, Samantha M. Logan, Anna Kübber‐Heiss, Annika Posautz, Gabrielle Stalder, Johanna Painer, Kristina Gasch, Sylvain Giroud, Kenneth B. Storey
Software Mentions: 1
Published: almost 6 years ago

10.1097/GME.0000000000001816

Reproductive period and preclinical cerebrospinal fluid markers for Alzheimer disease: a 25-year study
Cited by: 5
Author(s): Jenna Najar, Tore Hällström, Anna Zettergren, Lena Johansson, Erik Joas, Madeleine Mellqvist Fässberg, Henrik Zetterberg, Kaj Blennow, Silke Kern, Ingmar Skoog
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.6987

Help or hindrance? The evolutionary impact of whole‐genome duplication on immunogenetic diversity and parasite load
Cited by: 0
Author(s): Ellen Bell, Joanne Cable, Cláudio Oliveira, David S. Richardson, Levi Yant, Martin I. Taylor
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13024-021-00478-9

Functional microRNA targetome undergoes degeneration-induced shift in the retina
Cited by: 10
Author(s): Joshua Chu-Tan, Adrian V. Cioanca, Zhiping Feng, Yvette Wooff, Ulrike Schümann, Riemke Aggio-Bruce, Hardip R. Patel, Matt Rutar, Katherine M. Hannan, Kostya I. Panov, Jan Provis, Riccardo Natoli
Software Mentions: 1
Published: about 5 years ago

10.12688/wellcomeopenres.10036.2

Pathogenic mycobacteria achieve cellular persistence by inhibiting the Niemann-Pick Type C disease cellular pathway
Cited by: 21
Author(s): Paul Fineran, Emyr Lloyd-Evans, Nathan A. Lack, Nick Platt, Lianne C. Davis, Anthony J. Morgan, Doris Höglinger, Raju V. V. Tatituri, Simon Clark, Ian M. Williams, Patricia W. Tynan, Nada Al Eisa, Evgeniya V. Nazarova, Ann Williams, Antony Galione, Daniel S. Ory, Gurdyal S. Besra, David G. Russell, Michael B. Brenner, Edith Sim, Frances M. Platt
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-019-53853-4

Geography is essential for reproductive isolation between florally diversified morning glory species from Amazon canga savannahs
Cited by: 2
Author(s): Elena Babiychuk, Juliana Galaschi Teixeira, Lourival Tyski, José Tasso Felix Guimarães, Luiza Araújo Romeiro, Edilson Freitas da Silva, Jorge Filipe dos Santos, Santelmo Vasconcelos, Delmo Fonseca da Silva, Alexandre Castilho, José Oswaldo Siqueira, Vera Lúcia Imperatriz-Fonseca, Sergeï Kushnir
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-54968-4

Vocal individuality of Holstein-Friesian cattle is maintained across putatively positive and negative farming contexts
Cited by: 23
Author(s): Alexandra Green, Cameron Clark, Livio Favaro, Sabrina Lomax, David Reby
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13007-020-00652-y

SILEX: a fast and inexpensive high-quality DNA extraction method suitable for multiple sequencing platforms and recalcitrant plant species
Cited by: 29
Author(s): Santiago Vilanova, David Alonso, Pietro Gramazio, Jaime Prohens, Edgar García‐Fortea, Paola Ferrante, Maximilian Schmidt, Maria José Díez, Björn Usadel, Giovanni Giuliano, Jaime Prohens
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-55026-9

Improved Visualization of the Necrotic Zone after Microwave Ablation Using Computed Tomography Volume Perfusion in an In Vivo Porcine Model
Cited by: 5
Author(s): Keno K. Bressem, Janis L. Vahldiek, Christoph Erxleben, Seyd Shnayien, Franz Poch, Beatrice Geyer, Kai S. Lehmann, Bernd Hamm, Stefan M. Niehues
Software Mentions: 1
Published: almost 7 years ago

10.3390/metabo11060358

The Metabolic Response of Brachypodium Roots to the Interaction with Beneficial Bacteria Is Affected by the Plant Nutritional Status
Cited by: 6
Author(s): Martino Schillaci, Cheka Kehelpannala, Federico Martinez‐Seidel, Penelope M. C. Smith, Borjana Arsova, Michelle Watt, Ute Roessner
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0177013

Leopard in a tea-cup: A study of leopard habitat-use and human-leopard interactions in north-eastern India
Cited by: 55
Author(s): Aritra Kshettry, Srinivas Vaidyanathan, Vidya Athreya
Software Mentions: 1
Published: over 9 years ago

10.3389/fphar.2021.713197

Comprehensive Analysis of Fecal Microbiome and Metabolomics in Hepatic Fibrosis Rats Reveal Hepatoprotective Effects of Yinchen Wuling Powder From the Host-Microbial Metabolic Axis
Cited by: 5
Author(s): Yumeng Zhang, Min Zhao, Xue Jiang, Qiaoyu Qiao, Tingting Liu, Chunjie Zhao, Miao Wang
Software Mentions: 1
Published: over 5 years ago

10.1186/s13007-019-0498-5

Spatially resolved transcriptomics reveals plant host responses to pathogens
Cited by: 15
Author(s): Michael Giolai, Walter Verweij, Ashleigh Lister, Darren Heavens, Iain C. Macaulay, Matt Clark
Software Mentions: 1
Published: about 7 years ago

10.1186/s13007-021-00766-x

Timber identification of Autranella, Baillonella and Tieghemella in the taxonomically challenging Sapotaceae family
Cited by: 4
Author(s): Victor Deklerck, Erin Price, Samuel Vanden Abeele, Kévin Liévens, Edgard O. Espinoza, Hans Beeckman
Software Mentions: 1
Published: over 5 years ago

10.1515/biol-2020-0077

In silico identification of Capsicum type III polyketide synthase genes and expression patterns in Capsicum annuum
Cited by: 2
Author(s): Delong Kan, Di Zhao, Pengfei Duan
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-55574-0

Spatially Adjusted Time-varying Reproductive Numbers: Understanding the Geographical Expansion of Urban Dengue Outbreaks
Cited by: 19
Author(s): Ta-Chou Ng, Tzai‐Hung Wen
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-55825-0

Supplementation of live yeast based feed additive in early life promotes rumen microbial colonization and fibrolytic potential in lambs
Cited by: 25
Author(s): Frédérique Chaucheyras‐Durand, Aurélie Ameilbonne, Pauline Auffret, Mickaël Bernard, Marie-Madeleine Mialon, Lysiane Dunière, Evelyne Forano
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-55644-3

High Levels of Oxidative Stress and Skin Microbiome are Critical for Initiation and Development of Chronic Wounds in Diabetic Mice
Cited by: 41
Author(s): Jane H. Kim, Benjamin Yang, Amanda Tedesco, Elyson Gavin D. Lebig, Paul Ruegger, Karen Xu, James Borneman, Manuela Martins‐Green
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-019-55464-5

Insight into the biology of Mycobacterium mucogenicum and Mycobacterium neoaurum clade members
Cited by: 11
Author(s): Phani Rama Krishna Behra, B. M. Fredrik Pettersson, Malavika Ramesh, Santanu Dasgupta, Leif A. Kirsebom
Software Mentions: 1
Published: almost 7 years ago

10.1002/ece3.4158

Longevity and population age structure of the arroyo southwestern toad (Anaxyrus californicus) with drought implications
Cited by: 9
Author(s): Robert N. Fisher, Cheryl S. Brehme, Stacie A. Hathaway, Tim E. Hovey, Manna L. Warburton, Drew C. Stokes
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-019-55741-3

Sensitivity and specificity of metatranscriptomics as an arbovirus surveillance tool
Cited by: 23
Author(s): Jana Batovska, Peter T Mee, Stacey E. Lynch, Tim Sawbridge, Brendan Rodoni
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0159086

How to Fairly Allocate Scarce Medical Resources: Ethical Argumentation under Scrutiny by Health Professionals and Lay People
Cited by: 46
Author(s): Pius Krütli, Thomas Rosemann, Kjell Törnblom, Timo Smieszek
Software Mentions: 1
Published: over 10 years ago

10.12688/wellcomeopenres.16113.2

Pooled testing conserves SARS-CoV-2 laboratory resources and improves test turn-around time: experience on the Kenyan Coast
Cited by: 11
Author(s): Charles N. Agoti, Martin Mutunga, Arnold W. Lambisia, Domtila Kimani, Robinson Cheruiyot, Patience K. Kiyuka, Clement Lewa, Elijah Gicheru, Metrine Tendwa, Khadija Said Mohammed, Victor Osoti, Johnstone Makale, Brian Tawa, Calleb Odundo, Wesley Cheruiyot, Wilfred Nyamu, Wilson Gumbi, Jedidah Mwacharo, Lydia Nyamako, Edward Otieno, David Amadi, Janet Thoya, Angela Karani, Daisy Mugo, Jennifer Musyoki, Horace Gumba, Salim Mwarumba, Bonface M. Gichuki, Susan Njuguna, Debra Riako, Shadrack Mutua, John N. Gitonga, Yiakon Sein, Brian Bartilol, Shaban Mwangi, Donwilliams O. Omuoyo, John M. Morobe, Zaydah R. de Laurent, Philip Bejon, Lynette Isabella Ochola‐Oyier, Benjamin Tsofa
Software Mentions: 1
Published: over 5 years ago

10.3390/metabo11020100

Targeted Metabolomic Assessment of the Sub-Lethal Toxicity of Halogenated Acetic Acids (HAAs) to Daphnia magna
Cited by: 8
Author(s): Lisa M. Labine, Myrna J. Simpson
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2021.693167

Suppression of Inflammatory Cardiac Cytokine Network in Rats with Untreated Obesity and Pre-Diabetes by AT2 Receptor Agonist NP-6A4
Cited by: 7
Author(s): Madhavi P. Gavini, Abuzar Mahmood, Anthony Belenchia, Paige Beauparlant, Sumit Kumar, Sivakumar Ardhanari, Vincent G. DeMarco, Lakshmi Pulakat
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-67228-7

Analyzing trend and forecasting of rainfall changes in India using non-parametrical and machine learning approaches
Cited by: 183
Author(s): Bushra Praveen, Swapan Talukdar, . Shahfahad, Susanta Mahato, Jayanta Mondal, Pritee Sharma, Abu Reza Md. Towfiqul Islam, Atiqur Rahman
Software Mentions: 1
Published: over 6 years ago

10.1002/ece3.5444

Nonconsumptive predator effects modify crayfish‐induced bioturbation as mediated by limb loss: Field and mesocosm experiments
Cited by: 4
Author(s): Luc A. Dunoyer, Dakota Coomes, Philip H. Crowley
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-020-67224-x

The speed of FtsZ treadmilling is tightly regulated by membrane binding
Cited by: 10
Author(s): Daniela A. García‐Soriano, Tamara Heermann, Ana Raso, Germán Rivas, Petra Schwille
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-67158-4

Climate drives intraspecific differentiation in the expression of growth-defence trade-offs in a long-lived pine species
Cited by: 17
Author(s): Carla Vázquez‐González, Luís Sampedro, Vicente Rozas, Rafael Zas
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2021.626766

A Review of the Dose Justification of Phase 3 Trials to Regulatory Authorities for Drugs Intended for the Treatment of Type 2 Diabetes in Europe
Cited by: 0
Author(s): Jeroen V. Koomen, Jasper Stevens, Margje H. Monster‐Simons, Hiddo J.L. Heerspink, Peter G. M. Mol
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2019.01508

Combined Use of Astragalus Polysaccharide and Berberine Attenuates Insulin Resistance in IR-HepG2 Cells via Regulation of the Gluconeogenesis Signaling Pathway
Cited by: 19
Author(s): Zhu Mao, Min Lin, Xin Zhang, Lu Ping Qin
Software Mentions: 1
Published: almost 7 years ago

10.3390/metabo10010023

Phytohormone and Transcriptomic Analysis Reveals Endogenous Cytokinins Affect Kiwifruit Growth under Restricted Carbon Supply
Cited by: 22
Author(s): Simona Nardozza, Janine M. Cooney, Helen Boldingh, Katrin G. Hewitt, Tania Trower, Dan Jones, Amali H. Thrimawithana, Andrew C. Allan, Annette Richardson
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0251625

Effects of experimental warming on Betula nana epidermal cell growth tested over its maximum climatological growth range
Cited by: 4
Author(s): Fabian E.Z. Ercan, Juha Mikola, Tarja Silfver, Kristiina Myller, Elina Vainio, Sandra Słowińska, Michael Słowiński, Mariusz Lamentowicz, Daan Blok, Friederike Wagner-Cremer
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-67563-9

Immunosuppressive properties of cytochalasin B-induced membrane vesicles of mesenchymal stem cells: comparing with extracellular vesicles derived from mesenchymal stem cells
Cited by: 31
Author(s): Marina O. Gomzikova, Alexander Aimaletdinov, Oksana V. Bondar, И. Г. Старостина, Natalya Gorshkova, Olga Neustroeva, Sevindzh K. Kletukhina, Sirina V. Kurbangaleeva, V. V. Vorobev, Ekaterina Garanina, Jenny L. Persson, Jennie N. Jeyapalan, Nigel P. Mongan, Svetlana Khaiboullina, Albert A. Rizvanov
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2020.01036

Kuijieyuan Decoction Improved Intestinal Barrier Injury of Ulcerative Colitis by Affecting TLR4-Dependent PI3K/AKT/NF-κB Oxidative and Inflammatory Signaling and Gut Microbiota
Cited by: 69
Author(s): Baohai Liu, Xuehua Piao, Wei Niu, Qingyu Zhang, Chi Ma, Tong Wu, QiChang Gu, Tingfang Cui, Shuangdi Li
Software Mentions: 1
Published: over 6 years ago

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