cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1186/s12866-021-02103-7

Age-related changes of microbiota in midlife associated with reduced saccharolytic potential: an in vitro study
Cited by: 14
Author(s): Junkui Chen, Xionge Pi, Wei Liu, Qianming Ding, Xin Wang, Weiguo Jia, Liying Zhu
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.660069

Zebrafish Cancer Predisposition Models
Cited by: 11
Author(s): Kim Kobar, Keon Collett, Sergey V. Prykhozhij, Jason N. Berman
Software Mentions: 1
Published: about 5 years ago

10.1186/s12866-020-01729-3

The mismatch repair system (mutS and mutL) in Acinetobacter baylyi ADP1
Cited by: 5
Author(s): Hua Zhou, Linyue Zhang, Qingye Xu, Linghong Zhang, Yunsong Yu, Xiaoting Hua
Software Mentions: 1
Published: over 6 years ago

10.3389/fcell.2020.616332

Genome-Scale CRISPR-Cas9 Transcriptional Activation Screening in Metformin Resistance Related Gene of Prostate Cancer
Cited by: 8
Author(s): Jiahong Chen, Yaqiang Huang, Zhenfeng Tang, Maozhang Li, Xuemei Ling, Jinxian Liao, Xiaobo Zhou, Shumin Fang, Haibo Zhao, Weide Zhong, Xia Yuan
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.632183

Transcriptome and DNA Methylation Profiles of Mouse Fetus and Placenta Generated by Round Spermatid Injection
Cited by: 4
Author(s): Haibo Zhu, Hao Sun, Daren Yu, Tianda Li, Hai Tang, Chao Liu, Ying Zhang, Yurong Chen, Xiangpeng Dai, Ziyi Li, Wei Li, Ruizhi Liu, Guihai Feng, Qi Zhou
Software Mentions: 1
Published: over 5 years ago

10.1186/s12866-016-0924-z

Nationwide molecular epidemiology of methicillin-resistant Staphylococcus aureus responsible for horse infections in France
Cited by: 19
Author(s): François Guérin, Marguerite Fines-Guyon, Pierrick Meignen, Géraldine Delente, Caroline Fondrinier, Nancy Bourdon, Vincent Cattoir, Albertine Léon
Software Mentions: 1
Published: about 9 years ago

10.3389/fcell.2020.601502

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer
Cited by: 5
Author(s): Hantao Wang, Junjie Xing, Wei Wang, Gui‐Fen Lv, Haiyan He, Yeqing Lu, Mei Sun, Haiyan Chen, Xu Li
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2020.618598

Secreted Phosphoprotein 1 Expression in Retinal Mononuclear Phagocytes Links Murine to Human Choroidal Neovascularization
Cited by: 20
Author(s): Anja Schlecht, Peipei Zhang, Julian Wolf, Adrian Thien, Dennis-Dominik Rosmus, Stefaniya Boneva, Günther Schlunck, Clemens Lange, Peter Wieghofer
Software Mentions: 1
Published: over 5 years ago

10.1186/s12866-020-01773-z

Profiling of koumiss microbiota and organic acids and their effects on koumiss taste
Cited by: 28
Author(s): Hongxiang Tang, Hongbing Ma, Qiangchuan Hou, Weicheng Li, Haiyan Xu, Wenjun Liu, Zhihong Sun, Halatu Haobisi, Bilige Menghe
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21165784

Predicting the Development of Anti-Drug Antibodies against Recombinant alpha-Galactosidase A in Male Patients with Classical Fabry Disease
Cited by: 7
Author(s): Sanne J. van der Veen, Wytze J. Vlietstra, Laura van Dussen, André B. P. Kuilenburg, Marcel G. W. Dijkgraaf, Malte Lenders, Eva Brand, Christoph Wanner, Derralynn Hughes, Perry Elliott, Carla E. M. Hollak, Mirjam Langeveld
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcell.2021.652466

And Then There Were Three…: Extreme Regeneration Ability of the Solitary Chordate Polycarpa mytiligera
Cited by: 14
Author(s): Tal Gordon, Arnav Kumar Upadhyay, Lucia Manni, Dorothée Huchon, Noa Shenkar
Software Mentions: 1
Published: about 5 years ago

10.18632/aging.103163

miR-125a-5p inhibits glycolysis by targeting hexokinase-II to improve pulmonary arterial hypertension
Cited by: 14
Author(s): Luo Lu, Lusheng Xiao, Guili Lian, Huajun Wang, Liangdi Xie
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21176222

Enantiomerization of Axially Chiral Biphenyls: Polarizable MD Simulations in Water and Butylmethylether
Cited by: 4
Author(s): Veronika Zeindlhofer, Phillip S. Hudson, Ádám Márk Pálvölgyi, M. Welsch, Mazin Almarashi, H. Lee Woodcock, Bernard R. Brooks, Katharina Bica-Schröder, Christian Schröder
Software Mentions: 1
Published: almost 6 years ago

10.18632/aging.202406

Modeling paraquat-induced lung fibrosis in C. elegans reveals KRIT1 as a key regulator of collagen gene transcription
Cited by: 5
Author(s): Guanghui Deng, Le Li, Yan‐Qiong Ouyang
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2021.671300

Apple Ripening Is Controlled by a NAC Transcription Factor
Cited by: 22
Author(s): Zoë Migicovsky, Trevor H. Yeats, Sophie Watts, Jun Song, Charles F. Forney, Karen Burgher-MacLellan, Daryl J. Somers, Yihui Gong, Zhaoqi Zhang, Julia Vrebalov, Robin van Velzen, James Giovannoni, Jocelyn K. C. Rose, Sean Myles
Software Mentions: 1
Published: almost 5 years ago

10.3389/fgene.2021.726211

Genome Size Doubling Arises From the Differential Repetitive DNA Dynamics in the Genus Heloniopsis (Melanthiaceae)
Cited by: 7
Author(s): Jaume Pellicer, P. Fernández, Michael F. Fay, Ester Michálková, Ilia J. Leitch
Software Mentions: 1
Published: almost 5 years ago

10.3389/fgene.2019.00782

Controlled Reduction of Genomic Heterozygosity in an Industrial Yeast Strain Reveals Wide Cryptic Phenotypic Variation
Cited by: 9
Author(s): Nádia Sampaio, Ruth A. Watson, Juan Lucas Argueso
Software Mentions: 1
Published: almost 7 years ago

10.3389/fgene.2021.658241

Comprehensive Analysis of the Expression Characteristics of the Enhancer of the Zeste Homolog 2 Gene in Pan-Cancer
Cited by: 3
Author(s): Yuanyuan Kang, Ying Zhang, Yan Sun
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12866-020-1707-0

Design of targeted primers based on 16S rRNA sequences in meta-transcriptomic datasets and identification of a novel taxonomic group in the Asgard archaea
Cited by: 13
Author(s): Ruyi Zhang, Bin Zou, Yonggang Yan, Che Ok Jeon, Meng Li, Mingwei Cai, Zhe‐Xue Quan
Software Mentions: 1
Published: over 6 years ago

10.3389/fnhum.2021.671464

Sweat the Fall Stuff: Physical Activity Moderates the Association of White Matter Hyperintensities With Falls Risk in Older Adults
Cited by: 0
Author(s): Rachel A. Crockett, Ryan S. Falck, Elizabeth Dao, Chun Liang Hsu, Roger Tam, Walid Alkeridy, Teresa Liu‐Ambrose
Software Mentions: 1
Published: about 5 years ago

10.3389/fnhum.2021.642680

Evaluation of Response Processes to the Danish Version of the Dutch Multifactor Fatigue Scale in Stroke Using the Three-Step Test-Interview
Cited by: 4
Author(s): Frederik Lehman Dornonville de la Cour, Anne Norup, Trine Schow, Tonny Elmose Andersen
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms21186872

Systematic Analysis of Cold Stress Response and Diurnal Rhythm Using Transcriptome Data in Rice Reveals the Molecular Networks Related to Various Biological Processes
Cited by: 7
Author(s): Woo‐Jong Hong, Jiang Xu, Hye Ryun Ahn, Juyoung Choi, Seong-Ryong Kim, Ki‐Hong Jung
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.708184

Dynamic Characteristic Analysis of Antibodies in Patients With COVID-19: A 13-Month Study
Cited by: 17
Author(s): Danrong Shi, Tian-Hao Weng, Jie Wu, Chen Dai, Ran Luo, Keda Chen, Miaojin Zhu, Xiangyun Lu, Linfang Cheng, Qiuqiang Chen, Fumin Liu, Zhigang Wu, Haibo Wu, Changzhong Jin, Miao Guo, Zhe Chen, Nanping Wu, Hang‐Ping Yao, Min Zheng
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2019.03040

Bombardier Enables Delivery of Short-Form Bomanins in the Drosophila Toll Response
Cited by: 13
Author(s): Samuel Lin, Amit Fulzele, Lianne B. Cohen, Eric J. Bennett, Steven A. Wasserman
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2021.622935

Intra-Abdominal Lipopolysaccharide Clearance and Inactivation in Peritonitis: Key Roles for Lipoproteins and the Phospholipid Transfer Protein
Cited by: 6
Author(s): Maxime Nguyen, G Pallot, Antoine Jalil, Annabelle Tavernier, Aloïs Dusuel, Naïg Le Guern, Laurent Lagrost, Jean‐Paul Pais de Barros, Hélène Choubley, Victoria Bergas, Pierre‐Grégoire Guinot, David Masson, Bélaïd Bouhemad, Thomas Gautier
Software Mentions: 1
Published: about 5 years ago

10.1186/s12874-019-0862-1

Validating a transnational fracture treatment registry using a standardized method
Cited by: 2
Author(s): Jasper Frese, Annalice Gode, Gerhard Heinrichs, Armin Will, Arndt P. Schulz
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2018.01011

Monitoring Extracellular Vesicle Cargo Active Uptake by Imaging Flow Cytometry
Cited by: 44
Author(s): Yifat Ofir-Birin, Paula Abou Karam, Ariel Rudik, Tal Giladi, Ziv Porat, Neta Regev‐Rudzki
Software Mentions: 1
Published: about 8 years ago

10.3389/fimmu.2021.625712

Expansion of Functional Myeloid-Derived Suppressor Cells in Controlled Human Malaria Infection
Cited by: 9
Author(s): Carlos Lamsfus Calle, Rolf Fendel, Anurag Singh, Thomas L. Richie, Stephen L. Hoffman, Peter G. Kremsner, Benjamin Mordmüller
Software Mentions: 1
Published: about 5 years ago

10.1186/s12874-020-01128-2

Spie charts for quantifying treatment effectiveness and safety in multiple outcome network meta-analysis: a proof-of-concept study
Cited by: 6
Author(s): Caitlin Daly, Lawrence Mbuagbaw, Lehana Thabane, Sharon E. Straus, Jemila S Hamid
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2018.00655

Diverse Epitope Specificity, Immunodominance Hierarchy, and Functional Avidity of Effector CD4 T Cells Established During Priming Is Maintained in Lung After Influenza A Virus Infection
Cited by: 6
Author(s): Katherine A. Richards, Anthony DiPiazza, Ajitanuj Rattan, Zackery A. G. Knowlden, Hongmei Yang, Andrea J. Sant
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms21218218

Defining Metaniches in the Oral Cavity According to Their Microbial Composition and Cytokine Profile
Cited by: 15
Author(s): Corinna L Seidel, Roman G. Gerlach, Patrick Wiedemann, Matthias Weider, Gabriele Rodrian, Michael Häder, Benjamin Frey, Udo S. Gaipl, Aline Bözec, Fabian Cieplik, Christian Kirschneck, Christian Bogdan, Lina Gölz
Software Mentions: 1
Published: over 5 years ago

10.1186/s12874-016-0241-0

www.common-metrics.org: a web application to estimate scores from different patient-reported outcome measures on a common scale
Cited by: 17
Author(s): Felix Fischer, Matthias Rose
Software Mentions: 1
Published: over 9 years ago

10.3389/fimmu.2019.00116

Ultra-Sensitive CSF3R Deep Sequencing in Patients With Severe Congenital Neutropenia
Cited by: 12
Author(s): Maksim Klimiankou, Murat Uenalan, Siarhei Kandabarau, R. Nustede, I. Steiert, Sabine Mellor-Heineke, Cornelia Zeidler, Julia Skokowa, Karl Welte
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2021.674871

Keratinocyte-Immune Cell Crosstalk in a STAT1-Mediated Pathway: Novel Insights Into Rosacea Pathogenesis
Cited by: 13
Author(s): Zhili Deng, Fangfen Liu, Mengting Chen, Chuchu Huang, Wenqin Xiao, Sini Gao, Dan Jian, Yuyan Ouyang, San Xu, Jinmao Li, Shi Qian, Hongfu Xie, Guohong Zhang, Ji Li
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12874-018-0559-x

Appropriate statistical methods for analysing partially nested randomised controlled trials with continuous outcomes: a simulation study
Cited by: 28
Author(s): Jane Candlish, M. Dawn Teare, Munyaradzi Dimairo, Laura Flight, Laura Mandefield, Stephen J. Walters
Software Mentions: 1
Published: over 7 years ago

10.1186/s12874-019-0839-0

Multi-cohort modeling strategies for scalable globally accessible prostate cancer risk tools
Cited by: 5
Author(s): Johanna Tolksdorf, Michael W. Kattan, Stephen A. Boorjian, Stephen J. Freedland, Karim Saba, Cédric Poyet, Lourdes Guerrios-Rivera, Amanda M. De Hoedt, Michael A. Liss, Robin J. Leach, Javier Hernández, Emily Vertosick, Andrew Vickers, Donna P. Ankerst
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms21228578

Succinic Semialdehyde Dehydrogenase Deficiency: In Vitro and In Silico Characterization of a Novel Pathogenic Missense Variant and Analysis of the Mutational Spectrum of ALDH5A1
Cited by: 3
Author(s): Heiko Brennenstuhl, Miroslava Didiášová, Birgit Assmann, Mariarita Bertoldi, Gianluca Molla, Sabine Jung-Klawitter, Oya Kuseyri Hübschmann, Julian Schröter, Thomas Opladen, Ritva Tikkanen
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2020.01360

Inhibiting DNA Methylation Improves Survival in Severe Sepsis by Regulating NF-κB Pathway
Cited by: 26
Author(s): Luxi Cao, Tingting Zhu, Xiabing Lang, Jingquan Sha, Yi Yang, Chaohong Zhu, Yucheng Wang, Shi Feng, Cuili Wang, Ping Zhang, Jianghua Chen, Hong Jiang
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2020.01652

Systematic Immunophenotyping Reveals Sex-Specific Responses After Painful Injury in Mice
Cited by: 18
Author(s): Vivianne L. Tawfik, Nolan A. Huck, Quentin Baca, Edward A. Ganio, Elena S. Haight, Anthony Culos, Sajjad Ghaemi, Thanaphong Phongpreecha, Martin S. Angst, James D. Clark, Nima Aghaeepour, Brice Gaudillière
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12920-018-0354-x

HLA and proteasome expression body map
Cited by: 67
Author(s): Sebastian Boegel, Martin Löwer, Thomas Bukur, Patrick Sorn, John C. Castle, Uğur Şahin
Software Mentions: 1
Published: about 8 years ago

10.3389/fimmu.2021.666543

Innate Immune Responses to Wildtype and Attenuated Sheeppox Virus Mediated Through RIG-1 Sensing in PBMC In-Vitro
Cited by: 2
Author(s): Tesfaye Rufael, Richard T. Kangethe, Francisco J. Berguido, Tirumala Bharani Kumar Settypalli, Yang Liu, Reingard Grabherr, Angelika Loitsch, Elena L. Sassu, Rudolf Pichler, Giovanni Cattoli, Adama Diallo, Viskam Wijewardana, Charles Euloge Lamien
Software Mentions: 1
Published: about 5 years ago

10.1186/s12881-020-01089-9

Mutant POLQ and POLZ/REV3L DNA polymerases may contribute to the favorable survival of patients with tumors with POLE mutations outside the exonuclease domain
Cited by: 2
Author(s): Fangjin Huang, Hisashi Tanaka, Beatrice S. Knudsen, Joanne L. Rutgers
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2350-11-9

Impact of gene variants on sex-specific regulation of human Scavenger receptor class B type 1 (SR-BI) expression in liver and association with lipid levels in a population-based study
Cited by: 28
Author(s): Ornit Chiba‐Falek, Marshall Nichols, Sunil Suchindran, John R. Guyton, Geoffrey S. Ginsburg, Elizabeth Barrett‐Connor, Jeanette McCarthy
Software Mentions: 1
Published: over 16 years ago

10.1186/s12881-019-0909-5

Copy number variation is highly correlated with differential gene expression: a pan-cancer study
Cited by: 151
Author(s): Xin Shao, Ning Lv, Jie Liao, Jinbo Long, Rui Xue, Ai Ni, Donghang Xu, Xiaohui Fan
Software Mentions: 1
Published: over 6 years ago

10.1186/s12909-021-02576-0

Willingness to volunteer and readiness to practice of undergraduate medical students during the COVID-19 pandemic: a cross-sectional survey in Indonesia
Cited by: 39
Author(s): Gilbert Lazarus, Ardi Findyartini, Azis Muhammad Putera, Nico Gamalliel, David Nugraha, Imam Adli, Jason Phowira, Lyanna Azzahra, Bagas Ariffandi, Indah Suci Widyahening
Software Mentions: 1
Published: over 5 years ago

10.1186/s12909-018-1331-y

The Next Generation Scientist program: capacity-building for future scientific leaders in low- and middle-income countries
Cited by: 16
Author(s): Goonaseelan Pillai, Kelly Chibale, Edwin C. Constable, Akiko Nathalie Keller, Marcelo M. Gutierrez, Fareed Mirza, Christian Sengstag, Collen Masimirembwa, Paolo Denti, Gary Maartens, Michèle Ramsay, Bernhards Ogutu, Eyasu Makonnen, Richard K. Gordon, Carlos Gil Ferreira, F.A. Goldbaum, Wim Degrave, J. Michael Spector, Brigitta Tadmor, Hedwig J. Kaiser
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2021.675146

A Standardized Analysis of Tertiary Lymphoid Structures in Human Melanoma: Disease Progression- and Tumor Site-Associated Changes With Germinal Center Alteration
Cited by: 24
Author(s): Franziska Werner, Christine Wagner, Martín Simón, Katharina Glatz, Kirsten D. Mertz, Heinz Läubli, Johannes Griss, Stephan N. Wagner
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12909-020-1984-1

Assessment of third-year medical students’ comfort and preparedness for navigating challenging clinical scenarios with patients, peers, and supervisors
Cited by: 1
Author(s): Anna R. Kahkoska, Tracy M. Deselm, Laura Young
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.00118

Western Indian Rural Gut Microbial Diversity in Extreme Prakriti Endo-Phenotypes Reveals Signature Microbes
Cited by: 59
Author(s): Nar Singh Chauhan, Rajesh Pandey, Anupam Mondal, Shashank Gupta, Manoj Kumar Verma, Sweta Jain, Vasim Ahmed, Rutuja Patil, Dhiraj Agarwal, Bhushan Girase, Ankita Shrivastava, Fauzul Mobeen, Vikas Sharma, Tulika Srivastava, Sanjay Juvekar, Bhavana Prasher, Mitali Mukerji, Debasis Dash
Software Mentions: 1
Published: over 8 years ago

10.1186/1741-7015-11-35

A low-cost method to assess the epidemiological importance of individuals in controlling infectious disease outbreaks
Cited by: 38
Author(s): Timo Smieszek, Marcel Salathé
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2018.02204

A New Freshwater Cyanosiphovirus Harboring Integrase
Cited by: 22
Author(s): Xu Zhong, Curtis A. Suttle, Anne‐Claire Baudoux, Évelyne Derelle, Jonathan Colombet, Anna Cho, Jessica Caleta, Christophe Six, Stéphan Jacquet
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms21238950

Exploring the Interaction between the SWI/SNF Chromatin Remodeling Complex and the Zinc Finger Factor CTCF
Cited by: 11
Author(s): Mariangela Valletta, Rosita Russo, Ilaria Baglivo, Veronica Russo, Sara Ragucci, Annamaria Sandomenico, Emanuela Iaccarino, Menotti Ruvo, Italia De Feis, Claudia Angelini, Sara Iachettini, Annamaria Biroccio, Paolo V. Pedone, Angela Chambery
Software Mentions: 1
Published: over 5 years ago

10.1186/s12916-018-1214-4

Fitness to practise sanctions in UK doctors are predicted by poor performance at MRCGP and MRCP(UK) assessments: data linkage study
Cited by: 14
Author(s): Richard Wakeford, Kasia Ludka, Katherine Woolf, I. C. McManus
Software Mentions: 1
Published: over 7 years ago

10.1186/s12916-016-0764-6

Characteristics and knowledge synthesis approach for 456 network meta-analyses: a scoping review
Cited by: 64
Author(s): Wasifa Zarin, Areti Angeliki Veroniki, Vera Nincic, Afshin Vafaei, Emily Reynen, Sanober S. Motiwala, Jesmin Antony, Shannon Sullivan, Patricia Rios, Caitlin Daly, Joycelyne Ewusie, Μαρία Πετροπούλου, Adriani Nikolakopoulou, Anna Chaimani, Georgia Salanti, Sharon E. Straus, Andrea C. Tricco
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2020.539540

Analyses of the Bacterial Contamination on Belgian Broiler Carcasses at Retail Level
Cited by: 8
Author(s): Yining Zhu, Marie Joossens, Kurt Houf
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2016.01767

Differential Localization of Chemotactic Signaling Arrays during the Lifecycle of Vibrio parahaemolyticus
Cited by: 14
Author(s): Jan Heering, Simon Ringgaard
Software Mentions: 1
Published: over 9 years ago

10.18632/aging.103223

MiR-16-5p regulates postmenopausal osteoporosis by directly targeting VEGFA
Cited by: 28
Author(s): Tao Yu, Xiaomeng You, Haichao Zhou, Wenbao He, Zihua Li, Bing Li, Xia Jiang, Hongying Zhu, Youguang Zhao, Guangrong Yu, Yuan Xiong, Yunfeng Yang
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2020.00839

Population Genomic Analysis Reveals a Highly Conserved Mitochondrial Genome in Fusarium asiaticum
Cited by: 13
Author(s): Meixin Yang, Hao Zhang, Theo A. J. van der Lee, C. Waalwijk, Anne D. van Diepeningen, Feng Jing, Balázs Brankovics, Wanquan Chen
Software Mentions: 1
Published: about 6 years ago

10.1186/s12916-020-01859-5

The global, regional, and national burden of pancreatitis in 195 countries and territories, 1990–2017: a systematic analysis for the Global Burden of Disease Study 2017
Cited by: 56
Author(s): Guoqing Ouyang, Guangdong Pan, Qiang Liu, Yongrong Wu, Zhen Liu, Wuchang Lu, Shuai Li, Zhihan Zhou, Yu Wen
Software Mentions: 1
Published: over 5 years ago

10.1186/s12916-020-01703-w

Circulating bilirubin levels and risk of colorectal cancer: serological and Mendelian randomization analyses
Cited by: 27
Author(s): Nazlisadat Seyed Khoei, Mazda Jenab, Neil Murphy, Barbara L. Banbury, Robert Carreras‐Torres, Vivian Viallon, Tilman Kühn, Bas Bueno‐de‐Mesquita, Krasimira Aleksandrova, Amanda J. Cross, Elisabete Weiderpass, Magdalena Stępień, Andrew Cameron Bulmer, Anne Tjønneland, Marie Christine Boutron-Ruault, Gianluca Severi, Franck Carbonnel, Verena Katzke, Heiner Boeing, Michael Bergmann, Antonia Trichopoulou, Anna Karakatsani, Georgia Martimianaki, Domenico Palli, Giovanna Tagliabue, Salvatore Panico, Rosario Tumino, Carlotta Sacerdote, Guri Skeie, Susana Merino, Catalina Bonet, Miguel Rodríguez‐Barranco, Leire Gil, María Dolores Chirlaque, Eva Ardanaz, Robin Myte, Johan Hultdin, Aurora Pérez-Cornago, Dagfinn Aune, Konstantinos K. Tsilidis, Demetrius Albanês, John A. Baron, Sonja I. Berndt, Stéphane Bézieau, Hermann Brenner, Peter T. Campbell, Graham Casey, Andrew T. Chan, Jenny Chang‐Claude, Stephen J. Chanock, Michelle Cotterchio, Steven Gallinger, Stephen B. Gruber, Robert W. Haile, Jochen Hampe, Michael Hoffmeister, John L. Hopper, Li Hsu, Jeroen R. Huyghe, Mark A. Jenkins, Amit D. Joshi, Ellen Kampman, Susanna C. Larsson, Loı̈c Le Marchand, Christopher I. Li, Li Li, Annika Lindblom, Noralane M. Lindor, Vicente Martín, Vı́ctor Moreno, Polly A. Newcomb, Kenneth Offit, Shuji Ogino, Patrick S. Parfrey, Paul D.P. Pharoah, Gad Rennert, Lori C. Sakoda, Clemens Schafmayer, Stephanie L. Schmit, Robert E. Schoen, Martha L. Slattery, Stephen N. Thibodeau, Cornelia M. Ulrich, Fränzel J.B. van Duijnhoven, Korbinian Weigl, Stephanie J. Weinstein, Emily White, Alicja Wolk, Michael O. Woods, Anna H. Wu, Xuehong Zhang, Pietro Ferrari, Gabriele Anton, Annette Peters, Ulrike Peters, Marc J. Gunter, Karl‐Heinz Wagner, Heinz Freisling
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12879-019-4093-1

In vitro activities of Eravacycline against 336 isolates collected from 2012 to 2016 from 11 teaching hospitals in China
Cited by: 15
Author(s): Chunjiang Zhao, Xiaojuan Wang, Yawei Zhang, Ruobing Wang, Qi Wang, Henan Li, Hui Wang
Software Mentions: 1
Published: about 7 years ago

10.1186/s12879-015-1072-z

Syphilis in the economic center of South China: results from a real-time, web-based surveillance program
Cited by: 8
Author(s): Wangjian Zhang, Zhicheng Du, Shaokai Tang, Pi Guo, Xingdong Ye
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2019.01069

Microevolution and Adaptive Strategy of Psychrophilic Species Flavobacterium bomense sp. nov. Isolated From Glaciers
Cited by: 38
Author(s): Qing Liu, Hong‐Can Liu, Yu‐Guang Zhou, Yu‐Hua Xin
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2020.01801

Evaluation of a Potential Bacteriophage Cocktail for the Control of Shiga-Toxin Producing Escherichia coli in Food
Cited by: 20
Author(s): Nicola Mangieri, Claudia Picozzi, Riccardo Cocuzzi, Roberto Foschino
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.00847

Dietary Energy Level Promotes Rumen Microbial Protein Synthesis by Improving the Energy Productivity of the Ruminal Microbiome
Cited by: 37
Author(s): Zhongyan Lu, Zhihui Xu, Zongzhuan Shen, Yuanchun Tian, Hong Shen
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2019.03024

Comprehensive and Durable Modulation of Growth, Development, Lifespan and Fecundity in Anopheles stephensi Following Larval Treatment With the Stress Signaling Molecule and Novel Antimalarial Abscisic Acid
Cited by: 3
Author(s): Dean M Taylor, Cassandra Olds, Reagan S Haney, Brandi K. Torrevillas, Shirley Luckhart
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.00591

The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species
Cited by: 13
Author(s): Clara Atterby, Evangelos Mourkas, Guillaume Méric, Ben Pascoe, Helen Wang, Jonas Waldenström, Samuel K. Sheppard, Björn Olsén, Josef D. Järhult, Patrik Ellström
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2020.00454

“In situ similis” Culturing of Plant Microbiota: A Novel Simulated Environmental Method Based on Plant Leaf Blades as Nutritional Pads
Cited by: 10
Author(s): Rahma A. Nemr, Mohamed A. Khalil, Mohamed S. Sarhan, Mohamed Abbas, Hend Elsawey, Hanan H. Youssef, M. Hamza, Ahmed Morsi, Mahmoud El-Tahan, M. B. E. Fayez, Sascha Patz, Katja Witzel, Silke Ruppel, K. F. El-Sahhar, N. A. Hegazi
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2334-14-460

The frequency of tetracycline resistance genes co-detected with respiratory pathogens: a database mining study uncovering descriptive trends throughout the United States
Cited by: 1
Author(s): Matthew Huff, David Weisman, John S. Adams, Song Li, Jessica Green, Leslie Malone, Scott Clemmons
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12879-018-3248-9

Prevalence of human anelloviruses in Romanian healthy subjects and patients with common pathologies
Cited by: 22
Author(s): Sonia Spandole-Dinu, Dănuţ Cimponeriu, Anne-Marie Crăciun, I Radu, Silvia Nica, Mihai Toma, Oana Andrada Alexiu, Corneliu Sorin Iorga, Lavinia-Mariana Berca, Remus Nica
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2172-12-11

Ketamine inhibits tumor necrosis factor secretion by RAW264.7 murine macrophages stimulated with antibiotic-exposed strains of community-associated, methicillin-resistant Staphylococcus aureus
Cited by: 17
Author(s): Thomas Spentzas, Rebekah K H Shapley, Carlos Acuna Aguirre, Elizabeth Meals, Linda F. Lazar, Mark Rayburn, Brett S. Walker, B. Keith English
Software Mentions: 1
Published: over 15 years ago

10.3390/ijms22020539

Inflammation in the Human Periodontium Induces Downregulation of the α1- and β1-Subunits of the sGC in Cementoclasts
Cited by: 3
Author(s): Yüksel Korkmaz, Behrus Puladi, Kerstin M. Galler, Peer W. Kämmerer, Agnes Schröder, Lina Gölz, Tim Sparwasser, Wilhelm Bloch, Andreas Friebe, James Deschner
Software Mentions: 1
Published: over 5 years ago

10.1186/s12877-020-01850-y

Cross-sectoral inter-rater reliability of the clinical frailty scale – a Danish translation and validation study
Cited by: 23
Author(s): Søren Kabell Nissen, Anders Vestergaard Fournaise, Jørgen Lauridsen, Jesper Ryg, Christian H. Nickel, Claire Gudex, Mikkel Brabrand, Karen Andersen‐Ranberg
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.01815

Heterotrophic Carbon Fixation in a Salamander-Alga Symbiosis
Cited by: 11
Author(s): John A. Burns, Ryan Kerney, Solange Duhamel
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12864-017-4283-4

Phylogenetic and recombination analysis of the herpesvirus genus varicellovirus
Cited by: 26
Author(s): Aaron W. Kolb, Andrew C. Lewin, Ralph Trane, Gillian J. McLellan, Curtis R. Brandt
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-015-2155-3

High transcript abundance, RNA editing, and small RNAs in intergenic regions within the massive mitochondrial genome of the angiosperm Silene noctiflora
Cited by: 36
Author(s): Zhiqiang Wu, James D. Stone, Helena Štorchová, Daniel B. Sloan
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2021.683266

RNA-Based Analysis Reveals High Diversity of Plant-Associated Active Fungi in the Atmosphere
Cited by: 1
Author(s): Yan Chen, Xishen Zhu, Ziqiong Hou, Yi Wang, Zhou Yang, Ling Wang, Lin Liu, Jingrong Duan, Sauban Musa Jibril, Chengyun Li
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2020.00376

Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f
Cited by: 3
Author(s): Michael L. Chen, Eric D. Becraft, Maria Pachiadaki, Julia Brown, Jessica K. Jarett, Josep M. Gasol, Nikolai V. Ravin, Duane P. Moser, Takuro Nunoura, Gerhard J. Herndl, Tanja Woyke, Ramunas Stepanauskas
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.01615

Origin and Evolution of H1N1/pdm2009: A Codon Usage Perspective
Cited by: 7
Author(s): Fucheng Guo, Jian Yang, Junbin Pan, Xianghui Liang, Xuejuan Shen, David M. Irwin, Ruiai Chen, Yongyi Shen
Software Mentions: 1
Published: almost 6 years ago

10.18632/aging.101639

ZNF185 is a p53 target gene following DNA damage
Cited by: 9
Author(s): Artem Smirnov, Angela Cappello, Anna Maria Lena, Lucia Anemona, Alessandro Mauriello, Nicola Di Daniele, Margherita Annicchiarico-Petruzzelli, Gerry Melino, Eleonora Candi
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.01185

The First Temporal and Spatial Assessment of Vibrio Diversity of the Surrounding Seawater of Coral Reefs in Ishigaki, Japan
Cited by: 26
Author(s): Arshia Amin, Feng Gao, Nurhidayu Al‐saari, Pedro Milet Meirelles, Yasushi Yamazaki, Sayaka Mino, Fabiano L. Thompson, Toko Sawabe, Tomoo Sawabe
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2020.608856

Comparative Decomposition of Humans and Pigs: Soil Biogeochemistry, Microbial Activity and Metabolomic Profiles
Cited by: 8
Author(s): Jennifer M. DeBruyn, Katharina M. Hoeland, Lois S. Taylor, Jessica D. Stevens, Michelle A. Moats, Sreejata Bandopadhyay, Stephen P. Dearth, Hector F. Castro, Kaitlin K. Hewitt, Shawn R. Campagna, Angela Dautartas, Giovanna M. Vidoli, Amy Z. Mundorff, Dawnie Wolfe Steadman
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-021-07779-9

Amino acid transporter (AAT) gene family in foxtail millet (Setaria italica L.): widespread family expansion, functional differentiation, roles in quality formation and response to abiotic stresses
Cited by: 8
Author(s): Yang Yang, Yongmao Chai, Jiayi Liu, Jie Zheng, Zhangchen Zhao, Aduragbemi Amo, Chunge Cui, Qiumei Lu, Liang Chen, Yin‐Gang Hu
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2019.00611

Signal Disruption Leads to Changes in Bacterial Community Population
Cited by: 20
Author(s): Michael Schwab, Céline Bergonzi, Jonathan K. Sakkos, Christopher Staley, Qian Zhang, Michael J. Sadowsky, Mikael Elias
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2018.02759

Diazotrophs and N2-Fixation Associated With Particles in Coastal Estuarine Waters
Cited by: 32
Author(s): Jeppe N. Pedersen, Deniz Bombar, Ryan W. Paerl, Lasse Riemann
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-020-06825-2

RNA-sequencing reveals positional memory of multipotent mesenchymal stromal cells from oral and maxillofacial tissue transcriptomes
Cited by: 10
Author(s): Satoru Onizuka, Yasuharu Yamazaki, Sung‐Joon Park, Tomosada Sugimoto, Yoshitsugu Sone, Sebastian Sjöqvist, Michihiko Usui, Akiko Takeda, Kenta Nakai, Keisuke Nakashima, Takanori Iwata
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2164-14-136

A Drosophila functional evaluation of candidates from human genome-wide association studies of type 2 diabetes and related metabolic traits identifies tissue-specific roles for dHHEX
Cited by: 38
Author(s): Jay Pendse, Prasanna Venkatesh Ramachandran, Jianbo Na, Narisu Narisu, Jill L. Fink, Ross L. Cagan, Francis S. Collins, Thomas J. Baranski
Software Mentions: 1
Published: over 13 years ago

10.3389/fmicb.2019.00564

Microbial Profile and Genetic Polymorphism of Predominant Species in Some Traditional Fermented Seafoods of the Hainan Area in China
Cited by: 14
Author(s): Shuaiming Jiang, Chenchen Ma, Qingyun Peng, Dongxue Huo, Wu Li, Jiachao Zhang
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2020.00575

Integrative Proteome and Acetylome Analyses of Murine Responses to Cryptococcus neoformans Infection
Cited by: 10
Author(s): Hailong Li, Yanjian Li, Tianshu Sun, Wei Du, Zhijie Zhang, Dancheng Li, Chen Ding
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms22041830

Exploitation of Tolerance of Wheat Kernel Weight and Shape-Related Traits from Aegilops tauschii under Heat and Combined Heat-Drought Stresses
Cited by: 10
Author(s): Gamila Mohamed Idris Elhadi, Nasrein Mohamed Kamal, Yasir Serag Alnor Gorafi, Yuji Yamasaki, Kanenori Takata, Izzat S. A. Tahir, Michael Itam, Hiroyuki Tanaka, Hisashi Tsujimoto
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.648915

Repulsive Guidance Molecule b Deficiency Induces Gut Microbiota Dysbiosis and Increases the Susceptibility to Intestinal Inflammation in Mice
Cited by: 11
Author(s): Ying Shi, Lina Zhong, Yuting Li, Yanfang Chen, Shufen Feng, Min Wang, Yin Xia, Shaohui Tang
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-016-3062-y

Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes
Cited by: 4
Author(s): Kátia de Paiva Lopes, Francisco J. Campos‐Laborie, Ricardo Assunção Vialle, José Miguel Ortega, Javier De Las Rivas
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2017.00770

Microbial Population Dynamics and Ecosystem Functions of Anoxic/Aerobic Granular Sludge in Sequencing Batch Reactors Operated at Different Organic Loading Rates
Cited by: 104
Author(s): Enikö Barbara Szabo, Raquel Liébana, Malte Hermansson, Oskar Modin, Frank Persson, Britt‐Marie Wilén
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-021-07569-3

Removal of beneficial insertion effects prevent the long-term persistence of transposable elements within simulated asexual populations
Cited by: 2
Author(s): Christopher L. Butler, Ellen Bell, Martin I. Taylor
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.637656

Genomic Insights Into Last-Line Antimicrobial Resistance in Multidrug-Resistant Staphylococcus and Vancomycin-Resistant Enterococcus
Cited by: 16
Author(s): Adrianna M. Turner, Jean Lee, Claire L. Gorrie, Benjamin P Howden, Glen P. Carter
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2017.01380

Amplicon Sequencing of the slpH Locus Permits Culture-Independent Strain Typing of Lactobacillus helveticus in Dairy Products
Cited by: 8
Author(s): Aline Moser, Daniel Wüthrich, Rémy Bruggmann, Elisabeth Eugster‐Meier, Léo Meile, Stefan Irmler
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2019.02838

Composition and Diversity of CRISPR-Cas13a Systems in the Genus Leptotrichia
Cited by: 20
Author(s): Shinya Watanabe, Bintao Cui, Kotaro Kiga, Yoshifumi Aiba, Xin-Ee Tan, Yusuke Sato’o, Moriyuki Kawauchi, Tanit Boonsiri, Kanate Thitiananpakorn, Yusuke Taki, Fengyu Li, Aa Haeruman Azam, Yumi Nakada, Teppei Sasahara, Longzhu Cui
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2019.02852

Increasing Prevalence of ESBL-Producing Multidrug Resistance Escherichia coli From Diseased Pets in Beijing, China From 2012 to 2017
Cited by: 41
Author(s): Yanyun Chen, Zhihai Liu, Yaru Zhang, Zhenbiao Zhang, Lei Lei, Zhaofei Xia
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-021-07822-9

Integrative analysis of histomorphology, transcriptome and whole genome resequencing identified DIO2 gene as a crucial gene for the protuberant knob located on forehead in geese
Cited by: 4
Author(s): Yan Deng, Shiyan Hu, Chenglong Luo, Qingyuan Ouyang, Li Li, Jiaming Ma, Zhenping Lin, Junpeng Chen, Hehe Liu, Jiwei Hu, Guohong Chen, Dingming Shu, Yuxuan Pan, Bo Hu, Hua He, Hao Qu, Jiwen Wang
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2019.01001

Genome Analysis of Coxsackievirus A4 Isolates From Hand, Foot, and Mouth Disease Cases in Shandong, China
Cited by: 11
Author(s): Min Wang, Juan Li, Mingxiao Yao, Yawei Zhang, Tao Hu, Michael J. Carr, Sebastián Duchêne, Xing-Cheng Zhang, Zhenjie Zhang, Hong Zhou, Yigang Tong, Shujun Ding, Xianjun Wang, Weifeng Shi
Software Mentions: 1
Published: about 7 years ago

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