cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1186/s12864-021-07779-9

Amino acid transporter (AAT) gene family in foxtail millet (Setaria italica L.): widespread family expansion, functional differentiation, roles in quality formation and response to abiotic stresses
Cited by: 8
Author(s): Yang Yang, Yongmao Chai, Jiayi Liu, Jie Zheng, Zhangchen Zhao, Aduragbemi Amo, Chunge Cui, Qiumei Lu, Liang Chen, Yin‐Gang Hu
Software Mentions: 1
Published: over 5 years ago

10.3389/fvets.2020.558793

Does the Use of Different Indicators to Benchmark Antimicrobial Use Affect Farm Ranking?
Cited by: 14
Author(s): Lorcan O’Neill, Maria Rodrigues da Costa, Finola C. Leonard, J. F. Gibbons, Julia Adriana Calderón Díaz, Gerard McCutcheon, Edgar García Manzanilla
Software Mentions: 1
Published: about 6 years ago

10.1097/GME.0000000000001816

Reproductive period and preclinical cerebrospinal fluid markers for Alzheimer disease: a 25-year study
Cited by: 5
Author(s): Jenna Najar, Tore Hällström, Anna Zettergren, Lena Johansson, Erik Joas, Madeleine Mellqvist Fässberg, Henrik Zetterberg, Kaj Blennow, Silke Kern, Ingmar Skoog
Software Mentions: 1
Published: over 5 years ago

10.1590/0074-02760180332

First isolation of West Nile virus in Brazil
Cited by: 30
Author(s): Livia Carício Martins, Eliana Vieira Pinto da Silva, Lívia Medeiros Neves Casseb, Sandro Patroca da Silva, Ana Cecília Ribeiro Cruz, Jamilla Augusta de Sousa Pantoja, Daniele Barbosa de Almeida Medeiros, Arnaldo Jorge Martins Filho, Ermelinda do Rosário Moutinho da Cruz, Marialva Tereza Ferreira de Araújo, Jedson Ferreira Cardoso, Marcos Antônio Correia Rodrigues da Cunha, Gilton Luiz Almada, Alessandro Romano, Maria Guadalupe Dias Pestana Santos, Gilsa Aparecida Pimenta Rodrigues, Jannifer Oliveira Chiang, Juarez Antônio Simões Quaresma, Valéria Lima Carvalho, Pedro Fernando da Costa Vasconcelos
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12983-020-00378-6

Remarkable metabolic reorganization and altered metabolic requirements in frog metamorphic climax
Cited by: 22
Author(s): Wei Zhu, Liming Chang, Tian Zhao, Bin Wang, Jianping Jiang
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-021-88285-6

High FIB4 index is an independent risk factor of diabetic kidney disease in type 2 diabetes
Cited by: 13
Author(s): Haruka Saito, Hayato Tanabe, Atsushi Kudo, Noritaka Machii, Moritake Higa, Satoshi Yamaguchi, Gulinu Maimaituxun, Kazumichi Abe, Atsushi Takahashi, Kenichi Tanaka, Koichi Asahi, Hiroaki Masuzaki, Hiromasa Ohira, Junichiro James Kazama, Michio Shimabukuro
Software Mentions: 1
Published: over 5 years ago

10.1186/s12983-019-0341-x

Characterizing the composition, metabolism and physiological functions of the fatty liver in Rana omeimontis tadpoles
Cited by: 19
Author(s): Wei Zhu, Meihua Zhang, Liming Chang, Wenbo Zhu, Cheng Li, Feng Xie, Huan Zhang, Tian Zhao, Jianping Jiang
Software Mentions: 1
Published: almost 7 years ago

10.1007/s00795-020-00277-z

Quantitative volumetric analysis of the Golgi apparatus following X-ray irradiation by super-resolution 3D-SIM microscopy
Cited by: 1
Author(s): Takahiro Oike, Yuki Uchihara, Tiara Bunga Mayang Permata, Soehartati Gondhowiardjo, Tatsuya Ohno, Atsushi Shibata
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.56893

Rho1 activation recapitulates early gastrulation events in the ventral, but not dorsal, epithelium of Drosophila embryos
Cited by: 18
Author(s): Ashley Rich, Richard G. Fehon, Michael Glotzer
Software Mentions: 1
Published: almost 6 years ago

10.3390/jpm11060549

Comparison of Postoperative Coronal Leg Alignment in Customized Individually Made and Conventional Total Knee Arthroplasty
Cited by: 2
Author(s): Felix Wunderlich, Maheen Azad, Ruben Westphal, Thomas Klonschinski, Patrick Belikan, Philipp Drees, Lukas Eckhard
Software Mentions: 1
Published: over 5 years ago

10.1111/1365-2435.13538

Multigenerational exposure to elevated temperatures leads to a reduction in standard metabolic rate in the wild
Cited by: 28
Author(s): Natalie Pilakouta, Shaun S. Killen, Bjarni K. Kristjánsson, Skúli Skúlason, Jan Lindström, Neil B. Metcalfe, Kevin J. Parsons
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-94963-2

Development of a CNS-permeable reactivator for nerve agent exposure: an iterative, multi-disciplinary approach
Cited by: 5
Author(s): Brian J. Bennion, Michael Malfatti, Nicholas A. Be, Heather A. Enright, Saphon Hok, C. Linn Cadieux, Timothy S. Carpenter, Victoria Lao, Edward A. Kuhn, M. Windy McNerney, Felice C. Lightstone, Tin Nguyen, Carlos A. Valdez
Software Mentions: 1
Published: about 5 years ago

10.1007/s00403-019-02000-0

Molecular profiling of TOX-deficient neoplastic cells in cutaneous T cell lymphoma
Cited by: 4
Author(s): Jingkai Xu, He Huang, Shangshang Wang, Yanzhen Chen, Xueli Yin, Xuejun Zhang, Yaohua Zhang
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-021-95307-w

Identification and characterization of Piwi-interacting RNAs in human placentas of preeclampsia
Cited by: 2
Author(s): Jie He, Miaomiao Chen, Jiacheng Xu, Jie Fang, Zheng Liu, Hongbo Qi
Software Mentions: 1
Published: about 5 years ago

10.1007/s00018-020-03597-6

The functional characteristics of optogenetic gene therapy for vision restoration
Cited by: 8
Author(s): Moritz Lindner, Michael James Gilhooley, Stuart N. Peirson, Steven Hughes, Mark W. Hankins
Software Mentions: 1
Published: about 6 years ago

10.1186/s12864-020-06825-2

RNA-sequencing reveals positional memory of multipotent mesenchymal stromal cells from oral and maxillofacial tissue transcriptomes
Cited by: 10
Author(s): Satoru Onizuka, Yasuharu Yamazaki, Sung‐Joon Park, Tomosada Sugimoto, Yoshitsugu Sone, Sebastian Sjöqvist, Michihiko Usui, Akiko Takeda, Kenta Nakai, Keisuke Nakashima, Takanori Iwata
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.15236

Stat5 deficiency decreases transcriptional heterogeneity and supports emergence of hematopoietic sub-populations
Cited by: 2
Author(s): Zhengqi Wang, Kevin D. Bunting
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0110474

Flooding and Emergency Room Visits for Gastrointestinal Illness in Massachusetts: A Case-Crossover Study
Cited by: 39
Author(s): Timothy J. Wade, Cynthia J. Lin, Jyotsna S. Jagai, Elizabeth D. Hilborn
Software Mentions: 1
Published: about 12 years ago

10.1186/s12864-015-1678-y

Characterization of a second secologanin synthase isoform producing both secologanin and secoxyloganin allows enhanced de novo assembly of a Catharanthus roseus transcriptome
Cited by: 49
Author(s): Thomas Dugé de Bernonville, Emilien Foureau, Claire Parage, Arnaud Lanoue, Marc Clastre, Monica Arias Londono, Audrey Oudin, Benjamin Houillé, Nicolas Papon, Sébastien Besseau, Gaëlle Glévarec, Lucía Atehortúa, Nathalie Giglioli-Guivarc’h, Benoit St-Pierre, Vincenzo De Luca, Sarah E. O’Connor, Vincent Courdavault
Software Mentions: 1
Published: about 11 years ago

10.1534/g3.115.024299

Quantitative Trait Locus and Genetical Genomics Analysis Identifies Putatively Causal Genes for Fecundity and Brooding in the Chicken
Cited by: 13
Author(s): Martin Johnsson, Kenneth B. Jonsson, Leif Andersson, Per Jensen, I. A. Wright
Software Mentions: 1
Published: over 10 years ago

10.3390/cancers12010070

Integrated Analysis of Structural Variation and RNA Expression of FGFR2 and Its Splicing Modulator ESRP1 Highlight the ESRP1amp-FGFR2norm-FGFR2-IIIchigh Axis in Diffuse Gastric Cancer
Cited by: 12
Author(s): Sara Pinto Teles, Patrícia Oliveira, Marta Ferreira, Joana Carvalho, Pedro Ferreira, Carla Oliveíra
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2017.01726

In Silico Screening of the Human Gut Metaproteome Identifies Th17-Promoting Peptides Encrypted in Proteins of Commensal Bacteria
Cited by: 18
Author(s): Claudio Hidalgo-Cantabrana, Marco Antonio Moro-García, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Anália Lourenço, Rebeca Alonso-Arias, Borja Sánchez
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-021-83823-8

High diversity, inbreeding and a dynamic Pleistocene demographic history revealed by African buffalo genomes
Cited by: 8
Author(s): Deon de Jager, Brigitte Glanzmann, Marlo Möller, Eileen G. Hoal, Paul van Helden, Cindy Kim Harper, Paulette Bloomer
Software Mentions: 1
Published: over 5 years ago

10.1111/cpr.12724

Rbm14 maintains the integrity of genomic DNA during early mouse embryogenesis via mediating alternative splicing
Cited by: 7
Author(s): Jing Li, Chenxin Wang, Guihai Feng, Linlin Zhang, Guilai Chen, Hao Sun, Jiaqiang Wang, Ying Zhang, Qi Zhou, Wei Li
Software Mentions: 1
Published: almost 7 years ago

10.7717/peerj.11791

Associations of individual and joint expressions of ERCC6 and ERCC8 with clinicopathological parameters and prognosis of gastric cancer
Cited by: 2
Author(s): Jing Chen, Liang Li, Liping Sun, Yuan Yuan, Jingjing Jing
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.116.036350

Linkage Mapping and Comparative Genomics of Red Drum (Sciaenops ocellatus) Using Next-Generation Sequencing
Cited by: 6
Author(s): Christopher M. Hollenbeck, David S. Portnoy, Dana L. Wetzel, Tracy A. Sherwood, Paul B. Samollow, John R. Gold
Software Mentions: 1
Published: over 9 years ago

10.1534/g3.116.038596

An Induced Chromosomal Translocation in Soybean Disrupts a KASI Ortholog and Is Associated with a High-Sucrose and Low-Oil Seed Phenotype
Cited by: 34
Author(s): Austin Dobbels, Jean Michel Michno, Ben Campbell, Kamaldeep S. Virdi, Adrian O. Stec, Gary J. Muehlbauer, Seth L. Naeve, Robert M. Stupar
Software Mentions: 1
Published: over 9 years ago

10.1534/g3.116.038711

Evolution of Gene Expression Balance Among Homeologs of Natural Polyploids
Cited by: 21
Author(s): Jasdeep S. Mutti, Ramanjot K Bhullar, Kulvinder S. Gill
Software Mentions: 1
Published: over 9 years ago

10.3389/fnhum.2021.671464

Sweat the Fall Stuff: Physical Activity Moderates the Association of White Matter Hyperintensities With Falls Risk in Older Adults
Cited by: 0
Author(s): Rachel A. Crockett, Ryan S. Falck, Elizabeth Dao, Chun Liang Hsu, Roger Tam, Walid Alkeridy, Teresa Liu‐Ambrose
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0230141

Design of composite measure schemes for comparative severity assessment in animal-based neuroscience research: A case study focussed on rat epilepsy models
Cited by: 15
Author(s): Roelof Maarten van Dijk, Ines Koska, André Bleich, René Tolba, Isabel Seiffert, Christina Möller, Valentina Di Liberto, Steven R. Talbot, Heidrun Potschka
Software Mentions: 1
Published: over 6 years ago

10.1534/g3.117.041020

Reduced Protein Expression in a Virus Attenuated by Codon Deoptimization
Cited by: 20
Author(s): Benjamin R. Jack, Daniel R. Boutz, Matthew L. Paff, Bartram L Smith, James J. Bull, Claus O. Wilke
Software Mentions: 1
Published: about 9 years ago

10.3390/toxins12110734

Single-Dose Toxicity of Individual and Combined Sterigmatocystin and 5-Methoxysterigmatocistin in Rat Lungs
Cited by: 4
Author(s): Daniela Jakšić, Ida Ćurtović, Domagoj Kifer, Dubravka Rašić, Nevenka Kopjar, Vedran Micek, Maja Peraica, Maja Šegvić Klarić
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41398-020-00931-1

Testing relationships between multimodal modes of brain structural variation and age, sex and polygenic scores for neuroticism in children and adolescents
Cited by: 3
Author(s): Linn B. Norbom, Jaroslav Rokicki, Dennis van der Meer, Dag Alnæs, null Nhat Trung Doan, Torgeir Moberget, Tobias Kaufmann, Ole A. Andreassen, Lars T. Westlye, Christian K. Tamnes
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-021-84914-2

Long-term monitoring of SARS-CoV-2 RNA in wastewater of the Frankfurt metropolitan area in Southern Germany
Cited by: 92
Author(s): Shelesh Agrawal, Laura Orschler, Susanne Lackner
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.117.300338

Genomic Identification and Functional Characterization of Essential Genes in Caenorhabditis elegans
Cited by: 17
Author(s): Zhaozhao Qin, Robert Johnsen, Shicheng Yu, Jeffrey Shih-Chieh Chu, David L. Baillie, Nansheng Chen
Software Mentions: 1
Published: over 8 years ago

10.3389/fnhum.2021.642680

Evaluation of Response Processes to the Danish Version of the Dutch Multifactor Fatigue Scale in Stroke Using the Three-Step Test-Interview
Cited by: 4
Author(s): Frederik Lehman Dornonville de la Cour, Anne Norup, Trine Schow, Tonny Elmose Andersen
Software Mentions: 1
Published: over 5 years ago

10.18632/aging.103465

Systems biology approach to exploring the effect of cyclic stretching on cardiac cell physiology
Cited by: 0
Author(s): Chien Cheng Chen, Tai‐Chee Wong, Tzu Yun Chin, Wen Hsien Lee, Chan Yen Kuo, Yi Chiung Hsu
Software Mentions: 1
Published: about 6 years ago

10.18632/aging.103509

Circadian clock is associated with tumor microenvironment in kidney renal clear cell carcinoma
Cited by: 20
Author(s): Liangcheng Zhou, Zundu Luo, Zuwei Li, Qinying Huang
Software Mentions: 1
Published: over 6 years ago

10.1534/g3.118.200415

Genomic Selection in Preliminary Yield Trials in a Winter Wheat Breeding Program
Cited by: 64
Author(s): Vikas Belamkar, Mary J. Guttieri, Waseem Hussain, Diego Jarquín, Ibrahim S. Elbasyoni, Jesse Poland, Aaron J. Lorenz, P. S. Baenziger
Software Mentions: 1
Published: about 8 years ago

10.1534/g3.118.200376

A Missense Mutation in the Vacuolar Protein Sorting 11 (VPS11) Gene Is Associated with Neuroaxonal Dystrophy in Rottweiler Dogs
Cited by: 15
Author(s): Katherine L Lucot, Peter J. Dickinson, Carrie J. Finno, Tamer Mansour, Anna Letko, Katie M. Minor, James R. Mickelson, Cord Drögemüller, C. Titus Brown, Danika L. Bannasch
Software Mentions: 1
Published: about 8 years ago

10.7717/peerj.7341

Epidemiological analysis of respiratory and intestinal infectious diseases in three counties of Sichuan: the baseline survey of Disaster Mitigation Demonstration Area in western China
Cited by: 3
Author(s): Zhiqiang Xue, Zongrui Yang, Huanhuan Sun, Ren JingHuan, Mengzi Sun, Jiagen Li, Anning Zhang, Pingping Zheng, Pan Pan, Jing Dou, Li Shen, Chen Yang, Kexin Li, Tianyu Feng, Yaogai Lv, Chunli Bi, Lina Jin, Zhe Wang, Yan Yao
Software Mentions: 1
Published: over 7 years ago

10.7759/cureus.13636

When Multidrug-Resistant Organism (MDRO)-Positive ICU Patient Isolation and Cohorting Is Not Feasible, What Comes Next?
Cited by: 0
Author(s): Stelios Iordanou, Lakis Palazis, Chrystalla Timiliotou‐Matsentidou, Michalis Mendris, Vasilios Raftopoulos
Software Mentions: 1
Published: over 5 years ago

10.1002/acn3.50867

The NIH Toolbox for cognitive surveillance in Duchenne muscular dystrophy
Cited by: 11
Author(s): Mathula Thangarajh, Aaron J. Kaat, Genila Bibat, Jennifer Mansour, Katherine Summerton, Anthony Gioia, Carly Berger, Kristina K. Hardy, Kathryn R. Wagner
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.42951

Regulator of G protein signaling 12 enhances osteoclastogenesis by suppressing Nrf2-dependent antioxidant proteins to promote the generation of reactive oxygen species
Cited by: 30
Author(s): Andrew Ng, Ziqing Li, Megan M. Jones, Shuting Yang, Chunyi Li, Chuanyun Fu, Chengjian Tu, Merry Jo Oursler, Jun Qu, Shuying Yang
Software Mentions: 1
Published: about 7 years ago

10.1007/s00253-014-6199-0

Bacillus subtilis as heterologous host for the secretory production of the non-ribosomal cyclodepsipeptide enniatin
Cited by: 49
Author(s): Sophia Zobel, Jana Kumpfmüller, Roderich D. Süssmuth, Thomas Schweder
Software Mentions: 1
Published: almost 12 years ago

10.1038/ismej.2017.88

Nitrogen cost minimization is promoted by structural changes in the transcriptome of N-deprived Prochlorococcus cells
Cited by: 25
Author(s): Robert W. Read, Paul M. Berube, Steven J. Biller, Iva Neveux, Andrés Cubillos-Ruiz, Sallie W. Chisholm, Joseph J. Grzymski
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.10476

Determinants of behavioural and biological risk factors for cardiovascular diseases from state level STEPS survey (2017–19) in Madhya Pradesh
Cited by: 2
Author(s): Arun Kokane, Rajnish Joshi, Ashwin Kotnis, Anirban Chatterjee, Krishna Kumar Yadav, G Revadi, Ankur Joshi, Abhijit Pakhare
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0156147

Near-Bottom Hypoxia Impacts Dynamics of Bacterioplankton Assemblage throughout Water Column of the Gulf of Finland (Baltic Sea)
Cited by: 8
Author(s): Peeter Laas, Elina Šatova, Inga Lips, Urmas Lips, Jaak Simm, Veljo Kisand, Madis Metsis
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2020.571913

Complex Internal Microstructure of Feather Follicles on Chicken Skin Promotes the Bacterial Cross-Contamination of Carcasses During the Slaughtering Process
Cited by: 8
Author(s): Xibin Zhang, Zong‐Gen Peng, Peng Li, Yanwei Mao, Ru Shen, Rui Tao, Diao Xiu-guo, Longhai Liu, Yuzhong Zhao, Xin Luo
Software Mentions: 1
Published: about 6 years ago

10.1097/MD.0000000000015804

Prognostic nomogram for adult patients with acute myeloid leukemia
Cited by: 5
Author(s): Cunte Chen, Peipei Wang, Caixia Wang
Software Mentions: 1
Published: over 7 years ago

10.18632/aging.202639

The age pattern of the male-to-female ratio in mortality from COVID-19 mirrors that of cardiovascular disease in the general population
Cited by: 10
Author(s): Ila Nimgaonkar, Linda Valeri, Ezra Süsser, Sabiha Hussain, Jag Sunderram, Abraham Aviv
Software Mentions: 1
Published: over 5 years ago

10.1007/s13258-019-00855-1

Comparative genomic and functional analysis of Akkermansia muciniphila and closely related species
Cited by: 30
Author(s): Juyuan Xing, Xiaobo Li, Yingjiao Sun, Juanjuan Zhao, Shaohua Miao, Qin Xiong, Yonggang Zhang, Guishan Zhang
Software Mentions: 1
Published: about 7 years ago

10.1002/dvg.23387

A novel<scp>Axin2</scp>knock‐in mouse model for visualization and lineage tracing of<scp>WNT</scp>/<scp>CTNNB1</scp>responsive cells
Cited by: 13
Author(s): Anoeska Agatha Alida van de Moosdijk, Yorick Bernardus Cornelis van de Grift, Saskia Madelon Ada de Man, Amber L. Zeeman, Renée van Amerongen
Software Mentions: 1
Published: over 6 years ago

10.1097/MD.0000000000023390

Clinical effect of catgut implantation at acupoints for the treatment of simple obesity
Cited by: 3
Author(s): Xia Chen, Wei Huang, Dan Wei, De-Guang Ding, Jiao Yang, Hong-Ling Pan, Yingxue Jin, Yi-Wei Zheng, Yanji Zhang, Yingrong Zhang, Yiran Liu, Zhongyu Zhou
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.cub.2021.02.028

AGC kinases and MAB4/MEL proteins maintain PIN polarity by limiting lateral diffusion in plant cells
Cited by: 24
Author(s): Matouš Glanc, Kasper van Gelderen, Lukas Hoermayer, Shutang Tan, Satoshi Naramoto, Xixi Zhang, David Domjan, Ludmila Včelařová, Robert Hauschild, Alexander Johnson, Edward de Koning, Maritza van Dop, Eike H. Rademacher, Stef Janson, Xiaoyu Wei, Gergely Molnár, Matyáš Fendrych, Bert De Rybel, Remko Offringa, Jiřı́ Friml
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0185972

Assessing climate change-robustness of protected area management plans—The case of Germany
Cited by: 6
Author(s): Juliane Geyer, Stefan Kreft, Florian Jeltsch, Pierre L. Ibisch
Software Mentions: 1
Published: about 9 years ago

10.1038/s41436-020-0923-1

A longitudinal footprint of genetic epilepsies using automated electronic medical record interpretation
Cited by: 21
Author(s): Shiva Ganesan, Peter D. Galer, Katherine L. Helbig, Sarah McKeown, Margaret O’Brien, Alexander K. Gonzalez, Alex Felmeister, Pouya Khankhanian, Colin A Ellis, Ingo Helbig
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.cub.2020.05.048

Axis Specification in Zebrafish Is Robust to Cell Mixing and Reveals a Regulation of Pattern Formation by Morphogenesis
Cited by: 38
Author(s): Timothy Fulton, Vikas Trivedi, Andrea Attardi, Kerim Anlaş, Chaitanya Dingare, Alfonso Martínez Arias, Benjamin Steventon
Software Mentions: 1
Published: about 6 years ago

10.1038/s41388-021-01917-z

The newly identified MEK1 tyrosine phosphorylation target MACC1 is druggable by approved MEK1 inhibitors to restrict colorectal cancer metastasis
Cited by: 6
Author(s): Dennis Kobelt, Daniel Hernández, Claudia Fleuter, Mathias Dahlmann, Fabian Zincke, Janice Smith, Rebekka Migotti, Oliver Popp, Susen Burock, Wolfgang Walther, Gunnar Dittmar, Philipp Mertins, Ulrike Stein
Software Mentions: 1
Published: over 5 years ago

10.3390/ani11030786

Housing, Husbandry and Welfare of a “Classic” Fish Model, the Paradise Fish (Macropodus opercularis)
Cited by: 4
Author(s): Anita Rácz, Gábor Adorján, Erika Fodor, Boglárka Sellyei, Mohammed Essa Marghany Tolba, Ádám Miklósi, Máté Varga
Software Mentions: 1
Published: over 5 years ago

10.1128/AEM.01113-20

Multiple Drug-Induced Stress Responses Inhibit Formation of Escherichia coli Biofilms
Cited by: 4
Author(s): N. A. Teteneva, S. V. Mart’yanov, María Esteban-López, Jörg Kahnt, Timo Glatter, А.И. Нетрусов, В. К. Плакунов, Victor Sourjik
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0156926

Universal HbA1c Measurement in Early Pregnancy to Detect Type 2 Diabetes Reduces Ethnic Disparities in Antenatal Diabetes Screening: A Population-Based Observational Study
Cited by: 13
Author(s): Ruth Hughes, Jonathan Williman, Joanna Gullam
Software Mentions: 1
Published: over 10 years ago

10.18632/oncotarget.23687

Inferring modes of evolution from colorectal cancer with residual polyp of origin
Cited by: 2
Author(s): Min‐Soo Kim, Brooke R. Druliner, Nikolaos Vasmatzis, Taejeong Bae, Nicholas Chia, Alexej Abyzov, Lisa A. Boardman
Software Mentions: 1
Published: almost 9 years ago

10.3389/fmicb.2021.711377

Genomic Diversity of the Ostreid Herpesvirus Type 1 Across Time and Location and Among Host Species
Cited by: 10
Author(s): Benjamín Morga, Maude Jacquot, Camille Pelletier, Germain Chevignon, Lionel Dégremont, Antoine Biétry, Jean-François Pépin, Serge Heurtebise, Jean-Michel Escoubas, Tim P. Bean, Umberto Rosani, Changming Bai, Tristan Renault, Jean‐Baptiste Lamy
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0186433

Integrated mRNA and microRNA transcriptome analyses reveal regulation of thermal acclimation in Gymnocypris przewalskii: A case study in Tibetan Schizothoracine fish
Cited by: 14
Author(s): Cunfang Zhang, Chao Tong, Fei Tian, Kai Zhao
Software Mentions: 1
Published: about 9 years ago

10.1186/s12711-016-0244-7

Assessing accuracy of imputation using different SNP panel densities in a multi-breed sheep population
Cited by: 45
Author(s): Ricardo Vieira Ventura, Stephen Miller, K. G. Dodds, B. Auvray, Michael A. Lee, Matthew J. Bixley, Shannon Clarke, John C. McEwan
Software Mentions: 1
Published: about 10 years ago

10.3390/v13091731

Rapid Extraction and Detection of African Swine Fever Virus DNA Based on Isothermal Recombinase Polymerase Amplification Assay
Cited by: 10
Author(s): Arianna Ceruti, Rea Maja Kobialka, Judah Ssekitoleko, Julius Boniface Okuni, Sandra Blome, Ahmed Abd El Wahed, Uwe Truyen
Software Mentions: 1
Published: about 5 years ago

10.1186/s12711-019-0462-x

Accurate sequence variant genotyping in cattle using variation-aware genome graphs
Cited by: 27
Author(s): Danang Crysnanto, Christine Wurmser, Hubert Pausch
Software Mentions: 1
Published: over 7 years ago

10.1186/s12711-020-00564-4

A genome-wide analysis of copy number variation in Murciano-Granadina goats
Cited by: 7
Author(s): Dailu Guan, Alejandro Martínez, Anna Castelló, V. Landi, María Gracia Luigi-Sierra, Javier Fernández‐Álvarez, Betlem Cabrera, Juan Vicente Delgado, X. Such, J. Jordana, Marcel Amills
Software Mentions: 1
Published: about 6 years ago

10.1038/s41396-018-0325-4

Nitric oxide production and antioxidant function during viral infection of the coccolithophore Emiliania huxleyi
Cited by: 19
Author(s): Brittany Schieler, Megha V. Soni, Christopher M. Brown, Marco J. L. Coolen, Helen F. Fredricks, Benjamin A. S. Van Mooy, Donald J. Hirsh, Kay D. Bidle
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0080347

First Partial Skeleton of a 1.34-Million-Year-Old Paranthropus boisei from Bed II, Olduvai Gorge, Tanzania
Cited by: 135
Author(s): Manuel Domı́nguez-Rodrigo, Travis Rayne Pickering, Enrique Baquedano, Audax Mabulla, Darren F. Mark, Charles M. Musiba, Henry T. Bunn, David Uribelarrea, Vicki Smith, Fernando Diéz Martín, Alfredo Pérez‐González, Policarpo Sánchez, Manuel Santonja, Doris Barboni, Agness Gidna, Gail M. Ashley, José Yravedra, Jason L. Heaton, María Carmen Arriaza
Software Mentions: 1
Published: almost 13 years ago

10.7554/eLife.61287

Characterization of the mechanism by which the RB/E2F pathway controls expression of the cancer genomic DNA deaminase APOBEC3B
Cited by: 22
Author(s): Pieter A. Roelofs, Chai Yeen Goh, Boon Haow Chua, Matthew C. Jarvis, Teneale A. Stewart, John D. McCann, Rebecca M. McDougle, Michael A. Carpenter, John W.M. Martens, Paul N. Span, Dennis Kappei, Reuben S. Harris
Software Mentions: 1
Published: about 6 years ago

10.1534/genetics.117.300502

Fine-Scale Recombination Maps of Fungal Plant Pathogens Reveal Dynamic Recombination Landscapes and Intragenic Hotspots
Cited by: 58
Author(s): Eva H. Stukenbrock, Julien Dutheil
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-021-84911-5

ABA signalling and metabolism are not essential for dark-induced stomatal closure but affect response speed
Cited by: 11
Author(s): Ashley J. Pridgeon, Alistair M. Hetherington
Software Mentions: 1
Published: over 5 years ago

10.1016/j.dib.2019.104812

Zebrafish (Danio rerio) embryo-larvae locomotor activity data analysis: Evaluating anxiolytic effects of the antidepressant compound citalopram
Cited by: 4
Author(s): Johannes Pohl
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.dib.2020.106006

Airfreight data from Memanbetsu airport correlated to fish and scallop catch in okhotsk subprefecture, Hokkaido, Japan
Cited by: 0
Author(s): Hiroshi Matsumura, Tomohisa Ueda, Yoshimasa Sagane
Software Mentions: 1
Published: about 6 years ago

10.1186/gb-2010-11-11-r109

A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres
Cited by: 86
Author(s): Simon R. Ellwood, Zhaohui Liu, Robert A. Syme, Zhibing Lai, James K. Hane, Felicity J. Keiper, Caroline S. Moffat, Richard P. Oliver, Timothy L. Friesen
Software Mentions: 1
Published: almost 16 years ago

10.1016/j.dib.2019.01.042

Whole genome sequencing data and analyses of the underlying SUP35 transcriptional regulation for a Saccharomyces cerevisiae nonsense suppressor mutant
Cited by: 1
Author(s): Andrew G. Matveenko, Polina Drozdova, Svetlana E. Moskalenko, О. В. Тарасов, Galina A. Zhouravleva
Software Mentions: 1
Published: over 7 years ago

10.1016/j.dib.2018.11.115

A proteomic profiling dataset of recombinant Chinese hamster ovary cells showing enhanced cellular growth following miR-378 depletion
Cited by: 4
Author(s): Orla Coleman, Alan Costello, Michael Henry, Nga T. Lao, Niall Barron, Martin Clynes
Software Mentions: 1
Published: almost 8 years ago

10.1016/j.dib.2019.105104

Dataset of plant composition change over seven years at the Zumwalt Prairie Preserve, Oregon, USA
Cited by: 0
Author(s): Joshua P. Averett, Lesley R. Morris, Bryan A. Endress
Software Mentions: 1
Published: over 6 years ago

10.1016/j.dib.2018.09.103

Integrated dataset on acute phase protein response in chicken challenged with Escherichia coli lipopolysaccharide endotoxin
Cited by: 10
Author(s): Anita Horvatić, Nicolas Guillemin, Haider Tuma Kaab, Dorothy McKeegan, Emily O'Reilly, M. Bain, Josipa Kuleš, P.D. Eckersall
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0157912

Assessing the Complex and Evolving Relationship between Charges and Payments in US Hospitals: 1996 – 2012
Cited by: 13
Author(s): Hannah Hamavid, Maxwell Birger, Anne Bulchis, Liya Lomsadze, Jonathan Joseph, Ranju Baral, Anthony L. Bui, Cody Horst, Elizabeth Johnson, Joseph L Dieleman
Software Mentions: 1
Published: over 10 years ago

10.1016/j.dib.2020.106519

Prothrombotic hemostasis disturbances in patients with severe COVID-19: Individual daily data
Cited by: 18
Author(s): Michaël Hardy, Isabelle Michaux, Sarah Lessire, Jonathan Douxfils, Jean‐Michel Dogné, Marion Bareille, Geoffrey Horlait, Pierre Bulpa, Céline Chapelle, Silvy Laporte, Sophie Testa, Hugues Jacqmin, T. Lecompte, Alain Dive, François Mullier
Software Mentions: 1
Published: almost 6 years ago

10.3389/fimmu.2021.708184

Dynamic Characteristic Analysis of Antibodies in Patients With COVID-19: A 13-Month Study
Cited by: 17
Author(s): Danrong Shi, Tian-Hao Weng, Jie Wu, Chen Dai, Ran Luo, Keda Chen, Miaojin Zhu, Xiangyun Lu, Linfang Cheng, Qiuqiang Chen, Fumin Liu, Zhigang Wu, Haibo Wu, Changzhong Jin, Miao Guo, Zhe Chen, Nanping Wu, Hang‐Ping Yao, Min Zheng
Software Mentions: 1
Published: over 5 years ago

10.1016/j.dib.2019.104690

Dataset of plant community composition in the Zumwalt Prairie Preserve, Oregon, USA
Cited by: 2
Author(s): Bryan A. Endress, Joshua P. Averett
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12966-020-00944-5

Recent changes in the Dutch foodscape: socioeconomic and urban-rural differences
Cited by: 33
Author(s): Maria Gabriela Matias de Pinho, Joreintje D. Mackenbach, Nicolette R. den Braver, Joline W.J. Beulens, Johannes Brug, Jeroen Lakerveld
Software Mentions: 1
Published: over 6 years ago

10.3390/ma13173802

Margin Integrity of Bulk-Fill Composite Restorations in Primary Teeth
Cited by: 14
Author(s): Alina Paganini, Thomas Attin, Tobias T. Tauböck
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms21165784

Predicting the Development of Anti-Drug Antibodies against Recombinant alpha-Galactosidase A in Male Patients with Classical Fabry Disease
Cited by: 7
Author(s): Sanne J. van der Veen, Wytze J. Vlietstra, Laura van Dussen, André B. P. Kuilenburg, Marcel G. W. Dijkgraaf, Malte Lenders, Eva Brand, Christoph Wanner, Derralynn Hughes, Perry Elliott, Carla E. M. Hollak, Mirjam Langeveld
Software Mentions: 1
Published: about 6 years ago

10.1016/j.dib.2019.103757

Data on draft genome sequence of Bacillus sp. strain VKPM B-3276 isolated from Culex pipiens larvae
Cited by: 3
Author(s): V.V. Zinina, Aleksei A. Korzhenkov, A.V. Tepliuk, A.A. Kanikovskaja, М. В. Патрушев, Ilya V. Kublanov, Stepan V. Toshchakov
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0190345

Bioenergetics modeling of the annual consumption of zooplankton by pelagic fish feeding in the Northeast Atlantic
Cited by: 24
Author(s): Eneko Bachiller, Kjell Rong Utne, Teunis Jansen, Geir Huse
Software Mentions: 1
Published: almost 9 years ago

10.1186/s13059-015-0754-6

Small-scale gene duplications played a major role in the recent evolution of wheat chromosome 3B
Cited by: 61
Author(s): Natasha Glover, Josquin Daron, Lise Pingault, Klaas Vandepoele, Etienne Paux, Catherine Feuillet, Frédéric Choulet
Software Mentions: 1
Published: about 11 years ago

10.1186/s13059-015-0788-9

Genome-wide mapping reveals single-origin chromosome replication in Leishmania, a eukaryotic microbe
Cited by: 44
Author(s): Catarina A. Marques, Nicholas J. Dickens, Daniel Paape, Samantha J Campbell, Richard McCulloch
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-021-91505-8

DNA degradation in human teeth exposed to thermal stress
Cited by: 7
Author(s): Diego Lozano-Peral, Leticia Rubio, Ignacio Santos, María Jesús Gaitán, Enrique Viguera, Stella Martín‐de‐las‐Heras
Software Mentions: 1
Published: over 5 years ago

10.3390/ma12233932

Biocompatibility Investigation of Hybrid Organometallic Polymers for Sub-Micron 3D Printing via Laser Two-Photon Polymerisation
Cited by: 6
Author(s): Evaldas Balčiūnas, Nadežda Dreižė, Monika Grubliauskaitė, Silvija Urnikytė, Egidijus Šimoliūnas, Virginija Bukelskienė, Mindaugas Valius, Sara J. Baldock, John G. Hardy, Daiva Baltriukienė
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.dib.2021.106759

Application of one-, three-, and seven-day forecasts during early onset on the COVID-19 epidemic dataset using moving average, autoregressive, autoregressive moving average, autoregressive integrated moving average, and naïve forecasting methods
Cited by: 5
Author(s): Christopher J. Lynch, Ross Gore
Software Mentions: 1
Published: over 5 years ago

10.1016/j.dib.2020.106336

Data on draft genome sequence of Caldanaerobacter sp. strain 1523vc, a thermophilic bacterium, isolated from a hot spring of Uzon Caldera, (Kamchatka, Russia)
Cited by: 2
Author(s): Aleksei A. Korzhenkov, Stepan V. Toshchakov, Olga A. Podosokorskaya, М. В. Патрушев, Ilya V. Kublanov
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms21176222

Enantiomerization of Axially Chiral Biphenyls: Polarizable MD Simulations in Water and Butylmethylether
Cited by: 4
Author(s): Veronika Zeindlhofer, Phillip S. Hudson, Ádám Márk Pálvölgyi, M. Welsch, Mazin Almarashi, H. Lee Woodcock, Bernard R. Brooks, Katharina Bica-Schröder, Christian Schröder
Software Mentions: 1
Published: about 6 years ago

10.1186/s13059-016-1083-0

Transcriptome-wide effects of inverted SINEs on gene expression and their impact on RNA polymerase II activity
Cited by: 20
Author(s): Mansoureh Tajaddod, Andrea Tanzer, Konstantin Licht, Michael T. Wolfinger, Stefan Badelt, Florian Huber, Oliver Pusch, Sandy Schopoff, Michael Janisiw, Ivo L. Hofacker, Michael F. Jantsch
Software Mentions: 1
Published: about 10 years ago

10.3389/fmicb.2019.01670

Structural Basis of the Subcellular Topology Landscape of Escherichia coli
Cited by: 22
Author(s): Maria S Loos, Reshmi Ramakrishnan, Wim Vranken, Alexandra Tsirigotaki, Evrydiki-Pandora Tsare, Valentina Zorzini, Jozefien De Geyter, Biao Yuan, Ioannis Tsamardinos, Maria Klappa, Joost Schymkowitz, Frédéric Rousseau, Spyridoula Karamanou, Anastassios Economou
Software Mentions: 1
Published: over 7 years ago

10.1093/aobpla/plx054

Low temperature limits for root growth in alpine species are set by cell differentiation
Cited by: 23
Author(s): Sebastian Nagelmüller, Erika Hiltbrunner, Christian Körner
Software Mentions: 1
Published: about 9 years ago

Projects: cran: ggplot2

Enhanced Analysis

Science Score: 100/100

Bonuses:

Papers Mentioning ggplot2 11,441