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Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: almost 3 years ago
4,921 dependent packages
2,865,232 downloads last month

Enhanced Analysis
Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu
Repository Activity:
Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses
  • +520 Educational commit emails
    26 contributors with educational email addresses
  • +18 Science terms in README
    9 scientific terms found in README
Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.1186/s12873-021-00495-3
Effects of the COVID-19 pandemic on trauma-related emergency medical service calls: a retrospective cohort study
Cited by: 7
Author(s): Michael Azbel, Mikko Heinänen, Mitja Lääperi, Markku Kuisma
Software Mentions: 1
Published: almost 5 years ago
10.3390/metabo11020100
Targeted Metabolomic Assessment of the Sub-Lethal Toxicity of Halogenated Acetic Acids (HAAs) to Daphnia magna
Cited by: 8
Author(s): Lisa M. Labine, Myrna J. Simpson
Software Mentions: 1
Published: over 5 years ago
10.3390/metabo10010023
Phytohormone and Transcriptomic Analysis Reveals Endogenous Cytokinins Affect Kiwifruit Growth under Restricted Carbon Supply
Cited by: 22
Author(s): Simona Nardozza, Janine M. Cooney, Helen Boldingh, Katrin G. Hewitt, Tania Trower, Dan Jones, Amali H. Thrimawithana, Andrew C. Allan, Annette Richardson
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.3150
Effects of online group exercises for older adults on physical, psychological and social wellbeing: a randomized pilot trial
Cited by: 42
Author(s): Marcos Báez, Iman Khaghani Far, Francisco Ibarra, Michela Ferron, Daniele Didino, Fabio Casati
Software Mentions: 1
Published: over 9 years ago
10.1002/ajb2.1402
Transgenerational impacts of herbivory and inbreeding on reproductive output in <i>Solanum carolinense</i>
Cited by: 13
Author(s): Chad T Nihranz, William S. Walker, Steven J Brown, Mark C. Mescher, Consuelo Μ. De Moraes, Andrew G. Stephenson
Software Mentions: 1
Published: over 6 years ago
10.1186/s12940-018-0376-z
Childhood and adolescent phenol and phthalate exposure and the age of menarche in Latina girls
Cited by: 50
Author(s): Alexandra M. Binder, Camila Corvalán, Antònia M. Calafat, Xiaoyun Ye, Verónica Mericq, Ana Pereira, Karin B. Michels
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-018-27785-4
Spatiotemporal disturbance characteristics determine functional stability and collapse risk of simulated microbial ecosystems
Cited by: 13
Author(s): Sara König, Anja Worrich, Thomas Banitz, Florian Centler, Hauke Harms, Matthias Kästner, Anja Miltner, Lukas Y. Wick, Martin Thullner, Karin Frank
Software Mentions: 1
Published: about 8 years ago
10.3390/plants10071367
Natural and Historical Heritage of the Lisbon Botanical Gardens: An Integrative Approach with Tree Collections
Cited by: 1
Author(s): Ana Raquel Cunha, Ana Luísa Soares, Miguel Brilhante, Pedro Arsénio, T. Vasconcelos, Dalila Espírito-Santo, Maria Cristina Duarte, Maria M. Romeiras
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0214013
Zooplankters’ nightmare: The fast and efficient catching basket of larval phantom midges (Diptera: Chaoborus)
Cited by: 11
Author(s): Sebastian Kruppert, Lisa Deussen, Linda C. Weiss, Martin Horstmann, Jonas Wolff, Thomas Kleinteich, Stanislav N. Gorb, Ralph Tollrian
Software Mentions: 1
Published: over 7 years ago
10.1161/CIRCINTERVENTIONS.115.002988
Quantification of the Effect of Pressure Wire Drift on the Diagnostic Performance of Fractional Flow Reserve, Instantaneous Wave-Free Ratio, and Whole-Cycle Pd/Pa
Cited by: 42
Author(s): Christopher Cook, Yousif Ahmad, Matthew Shun-Shin, Sukhjinder Nijjer, Ricardo Petraco, Rasha Al‐Lamee, Jamil Mayet, Dárrel P. Francis, Sayan Sen, Justin E. Davies
Software Mentions: 1
Published: over 10 years ago
10.3389/fmicb.2020.590035
Analysis of Microbial Water Contamination, Soil Microbial Community Structure, and Soil Respiration in a Collaborative First-Year Students as Scholars Program (SAS)
Cited by: 1
Author(s): Leah T. Stiemsma, Stephen D. Davis, Jay L. Brewster
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-018-28349-2
The epidemiological characteristics and molecular phylogeny of the dengue virus in Guangdong, China, 2015
Cited by: 11
Author(s): Jiufeng Sun, Huan Zhang, Qiqi Tan, Huiqiong Zhou, Dawei Guan, Xin Zhang, Duan Jinhua, Shumin Cai, Zhiqiang Peng, Jianfeng He, Changwen Ke, Junfen Lin, Tao Liu, De Wu
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-018-28116-3
Complex ecological interactions of Staphylococcus aureus in tampons during menstruation
Cited by: 13
Author(s): Isaline Jacquemond, Anaëlle Muggeo, G. Lamblin, Anne Tristan, Yves Gillet, Pierre Adrien Bolze, Michèle Bes, Claude Alexandre Gustave, Jean-Philippe Rasigade, François Golfier, Tristan Ferry, Audrey Dubost, Danis Abrouk, Samuel Barreto, Claire Prigent‐Combaret, Jean Thioulouse, Gérard Lina, Daniel Müller
Software Mentions: 1
Published: about 8 years ago
10.3389/fmicb.2019.00656
Archaeorhizomycetes Spatial Distribution in Soils Along Wide Elevational and Environmental Gradients Reveal Co-abundance Patterns With Other Fungal Saprobes and Potential Weathering Capacities
Cited by: 27
Author(s): Eric Pinto‐Figueroa, Emily Seddon, Erika Yashiro, Aline Buri, Hélène Niculita‐Hirzel, Jan Roelof van der Meer, Antoine Guisan
Software Mentions: 1
Published: over 7 years ago
10.7717/peerj.12121
A comprehensive review and call for studies on firefly larvae
Cited by: 7
Author(s): William B. Riley, Simone Policena Rosa, Luiz Felipe Lima da Silveira
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12862-021-01756-2
Care-giver identity impacts offspring development and performance in an annually social bumble bee
Cited by: 7
Author(s): Claudinéia Pereira Costa, Kenneth C. Fisher, Blanca M. Guillén, Naoaki Yamanaka, Guy Bloch, S. Hollis Woodard
Software Mentions: 1
Published: over 5 years ago
10.3390/metabo11060382
Dried Blood Spot (DBS) Methodology Study for Biomarker Discovery in Lysosomal Storage Disease (LSD)
Cited by: 7
Author(s): Corina-Marcela Rus, Sebastiano Di Bucchianico, Claudia Cozma, Ralf Zimmermann, Péter Bauer
Software Mentions: 1
Published: about 5 years ago
10.3389/fmicb.2019.01316
Micronutrient Requirements and Sharing Capabilities of the Human Gut Microbiome
Cited by: 95
Author(s): Dmitry A. Rodionov, Aleksandr A. Arzamasov, Matvei Khoroshkin, Stanislav N. Iablokov, Semen A. Leyn, Scott N. Peterson, Pavel S. Novichkov, Andrei L. Osterman
Software Mentions: 1
Published: about 7 years ago
10.1186/s12898-020-00301-x
Prevalence of monarch (Danaus plexippus) and queen (Danaus gilippus) butterflies in West Texas during the fall of 2018
Cited by: 3
Author(s): Matthew Z. Brym, Cassandra Henry, Shannon P. Lukashow-Moore, Brett J. Henry, Natasja van Gestel, Ronald J. Kendall
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-018-29559-4
Methodological bias associated with soluble protein recovery from soil
Cited by: 14
Author(s): Lucy M. Greenfield, Paul W. Hill, Eric Paterson, Elizabeth M. Baggs, Davey L. Jones
Software Mentions: 1
Published: about 8 years ago
10.1186/s12898-020-00334-2
Diversity of entomopathogenic fungi associated with Mediterranean fruit fly (Ceratitis capitata (Diptera: Tephritidae)) in Moroccan Argan forests and nearby area: impact of soil factors on their distribution
Cited by: 11
Author(s): Ayoub Hallouti, Mohamed Aït Hamza, A. Zahidi, Rachid Ait Hammou, Rachid Bouharroud, A. Ait Ben Aoumar, H. Boubaker
Software Mentions: 1
Published: over 5 years ago
10.3389/fimmu.2021.675146
A Standardized Analysis of Tertiary Lymphoid Structures in Human Melanoma: Disease Progression- and Tumor Site-Associated Changes With Germinal Center Alteration
Cited by: 24
Author(s): Franziska Werner, Christine Wagner, Martín Simón, Katharina Glatz, Kirsten D. Mertz, Heinz Läubli, Johannes Griss, Stephan N. Wagner
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-018-29825-5
Skeletal muscle cutoff values for sarcopenia diagnosis using T10 to L5 measurements in a healthy US population
Cited by: 259
Author(s): Brian A. Derstine, Sven A. Holcombe, Brian E. Ross, Nicholas Wang, Grace L. Su, Stewart C. Wang
Software Mentions: 1
Published: about 8 years ago
10.3390/e23050626
Impact of Coronavirus Outbreaks on Science and Society: Insights from Temporal Bibliometry of SARS and COVID-19
Cited by: 2
Author(s): Ramya Gupta, Abhishek N. Prasad, Suresh Babu, Gitanjali Yadav
Software Mentions: 1
Published: over 5 years ago
10.1007/s11306-019-1484-7
Metabolomic and lipidomic assessment of the metabolic syndrome in Dutch middle-aged individuals reveals novel biological signatures separating health and disease
Cited by: 36
Author(s): Izabella Surowiec, Raymond Noordam, Kate Bennett, Marian Beekman, P. Eline Slagboom, Torbjörn Lundstedt, Diana van Heemst
Software Mentions: 1
Published: over 7 years ago
10.1007/s11306-020-01740-9
Glycerophospholipid and detoxification pathways associated with small for gestation age pathophysiology: discovery metabolomics analysis in the SCOPE cohort
Cited by: 6
Author(s): Aude-Claire Morillon, Débora Farias Batista Leite, Shirish Yakkundi, Lee A. Gethings, Grace Thomas, Philip N. Baker, Louise C. Kenny, James English, Fergus P. McCarthy
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms22147578
Haplotype Analysis of BADH1 by Next-Generation Sequencing Reveals Association with Salt Tolerance in Rice during Domestication
Cited by: 8
Author(s): Myeong-Hyeon Min, Thant Zin Maung, Cheng Yuan, Rungnapa Phitaktansakul, Gang-Seob Lee, Sang-Ho Chu, Kyu‐Won Kim, Yong‐Jin Park
Software Mentions: 1
Published: about 5 years ago
10.7717/peerj.5007
Evaluating the utility of the female-specific mitochondrialf-orfgene for population genetic, phylogeographic and systematic studies in freshwater mussels (Bivalvia: Unionida)
Cited by: 7
Author(s): Brent M. Robicheau, Emily Chase, Walter R. Hoeh, John L. Harris, Donald T. Stewart, Sophie Breton
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-018-30500-y
The Gpr1-regulated Sur7 family protein Sfp2 is required for hyphal growth and cell wall stability in the mycoparasite Trichoderma atroviride
Cited by: 24
Author(s): Lea Atanasova, Sabine Gruber, Alexander Lichius, Theresa Radebner, Leoni Abendstein, Martin Münsterkötter, Nancy Stralis‐Pavese, Paweł P. Łabaj, David P. Kreil, Susanne Zeilinger
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0256862
Pharmacokinetics of tulathromycin in pregnant ewes (Ovis aries) challenged with Campylobacter jejuni
Cited by: 5
Author(s): Michael J. Yaeger, Jonathan P. Mochel, Zhongliang Wu, Paul J. Plummer, Orhan Şahin, Joseph Wayne Smith, Melda Meral Öcal, Ashenafi Feyisa Beyi, Changyun Xu, Qijing Zhang, Ronald W. Griffith
Software Mentions: 1
Published: almost 5 years ago
10.3390/cancers11121904
Potent Antitumor Activity of Liposomal Irinotecan in an Organoid- and CRISPR-Cas9-Based Murine Model of Gallbladder Cancer
Cited by: 10
Author(s): Zulrahman Erlangga, Katharina Wolff, Tanja Poth, Alexander Peltzer, Sven Nahnsen, Steffi Spielberg, Kai Timrott, Norman Woller, Florian Kühnel, Michael P. Manns, Anna Saborowski, Arndt Vogel, Michael Saborowski
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-019-55800-9
Not all birds have a single dominantly expressed MHC-I gene: Transcription suggests that siskins have many highly expressed MHC-I genes
Cited by: 10
Author(s): Anna Drews, Helena Westerdahl
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.38594
Privatisation rescues function following loss of cooperation
Cited by: 21
Author(s): Sandra Breum Andersen, Melanie Ghoul, Rasmus Lykke Marvig, Zhuo‐Bin Lee, Søren Molin, Helle Krogh Johansen, Ashleigh S. Griffin
Software Mentions: 1
Published: over 7 years ago
10.1007/s11306-021-01806-2
Differential insulin sensitivity of NMR-based metabolomic measures in a two-step hyperinsulinemic euglycemic clamp study
Cited by: 0
Author(s): Wenyi Wang, Ko Willems van Dijk, Carolien A. Wijsman, Maarten P. Rozing, Simon P. Mooijaart, Marian Beekman, P. Eline Slagboom, J. Wouter Jukema, Raymond Noordam, Diana van Heemst
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0239492
Evaluation of pooled sample analysis strategy in expediting case detection in areas with emerging outbreaks of COVID-19: A pilot study
Cited by: 15
Author(s): Anirudh Singh, Ram Kumar Nema, Ankur Joshi, Prem Shankar, Shashwati Nema, Arun Raghuwanshi, Chitra Patankar, Bijina J. Mathew, Arti Shrivas, Ritu Pandey, Ranu Tripathi, Debasis Biswas, Sarman Singh
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-019-56476-x
High MAST2 mRNA expression and its role in diagnosis and prognosis of liver cancer
Cited by: 9
Author(s): Yan Jiao, Yanqing Li, Peiqiang Jiang, Zhuo Fu, Yahui Liu
Software Mentions: 1
Published: over 6 years ago
10.1177/2041669520958025
The Rotating Snakes Illusion Is a Straightforward Consequence of Nonlinearity in Arrays of Standard Motion Detectors
Cited by: 0
Author(s): Michael Bach, Lea Atala-Gérard
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12861-018-0171-7
Cell cycle accumulation of the proliferating cell nuclear antigen PCN-1 transitions from continuous in the adult germline to intermittent in the early embryo of C. elegans
Cited by: 7
Author(s): Zuzana Kocsisova, Kerry Kornfeld, Tim Schedl
Software Mentions: 1
Published: about 8 years ago
10.1093/aob/mcy127
The diversity and evolution of pollination systems in large plant clades: Apocynaceae as a case study
Cited by: 45
Author(s): Jeff Ollerton, Sigrid Liede‐Schumann, Mary E. Endress, Ulrich Meve, André Rodrigo Rech, Adam Shuttleworth, Héctor Alejandro Keller, Mark Fishbein, Leonardo O. Alvarado-Cárdenas, Felipe W. Amorim, Peter Bernhardt, Ferhat Celep, Yolanda Chirango, Fidel Chiriboga‐Arroyo, Laure Civeyrel, Andrea A. Cocucci, Louise Cranmer, Inara Carolina da Silva-Batista, Linde de Jager, Mariana Scaramussa Deprá, Arthur Domingos‐Melo, Courtney Dvorsky, Kayna Agostini, Leandro Freitas, Maria Cristina Gaglianone, Leonardo Galetto, M. G. Gilbert, Ixchel González-Ramírez, Pablo Gorostiague, D. J. Goyder, Leandro Hachuy‐Filho, Annemarie Heiduk, Aaron F. Howard, Gretchen M. Ionta, Sofia C. Islas-Hernández, Steven D. Johnson, Lize Joubert, Christopher N. Kaiser‐Bunbury, Susan R. Kephart, Aroonrat Kidyoo, Suzanne Koptur, Cristiana Koschnitzke, Ellen Lamborn, Tatyana Livshultz, Isabel Cristina Machado, Suani Giovanna Pacheco Marino, Lumi Mema, Ko Mochizuki, Leonor Patrícia Cerdeira Morellato, Chediel K. Mrisha, Evalyne W. Muiruri, Naoyuki Nakahama, Viviany Teixeira do Nascimento, Clive Nuttman, Paulo Eugênio Oliveira, Craig I. Peter, Sachin A. Punekar, Nicole E. Rafferty, Alessandro Rapini, Zong‐Xin Ren, Claudia I. Rodríguez-Flores, Liliana Rosero, Shoko Sakai, Marlies Sazima, Sandy–Lynn Steenhuisen, Ching Wen Tan, Carolina Torres, Kristian Trøjelsgaard, Atushi Ushimaru, Milene Faria Vieira, Ana Pía Wiemer, Tadashi Yamashiro, Tarcila de Lima Nadia, Joel Araújo Queiroz, Zelma Glebya Maciel Quirino
Software Mentions: 1
Published: about 8 years ago
10.3389/fimmu.2021.666543
Innate Immune Responses to Wildtype and Attenuated Sheeppox Virus Mediated Through RIG-1 Sensing in PBMC In-Vitro
Cited by: 2
Author(s): Tesfaye Rufael, Richard T. Kangethe, Francisco J. Berguido, Tirumala Bharani Kumar Settypalli, Yang Liu, Reingard Grabherr, Angelika Loitsch, Elena L. Sassu, Rudolf Pichler, Giovanni Cattoli, Adama Diallo, Viskam Wijewardana, Charles Euloge Lamien
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-019-56965-z
Thermotolerance experiments on active and desiccated states of Ramazzottius varieornatus emphasize that tardigrades are sensitive to high temperatures
Cited by: 30
Author(s): Ricardo Cardoso Neves, Lykke K. B. Hvidepil, Thomas L. Sørensen-Hygum, Robyn M. Stuart, Nadja Møbjerg
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pmed.1002514
The epidemiology of adolescents living with perinatally acquired HIV: A cross-region global cohort analysis
Cited by: 91
Author(s): Amy L. Slogrove, Michael Schomaker, Mary‐Ann Davies, Paige Williams, Suna Balkan, Jihane Ben‐Farhat, Nancy R. Calles, Kulkanya Chokephaibulkit, Charlotte Duff, Tanoh François Eboua, Adeodata Kekitiinwa‐Rukyalekere, Nicola Maxwell, Jorge Pinto, George R. Seage, Chloe A. Teasdale, Sebastian Wanless, Josiane Warszawski, Kara Wools‐Kaloustian, Marcel Yotebieng, Venessa Timmerman, Intira Jeannie Collins, Ruth Goodall, Colette Smith, Kunjal Patel, Mary E. Paul, Diana Gibb, Rachel C. Vreeman, Elaine J. Abrams, Rohan Hazra, Russell Van Dyke, Linda‐Gail Bekker, Lynne Mofenson, Marissa Vicari, Shaffiq Essajee, Martina Penazzato, Gabriel Anabwani, Edith Q. Mohapi, Peter N. Kazembe, Makhosazana Hlatshwayo, Mwita Lumumba, Tessa Goetghebuer, Claire Thorne, Luisa Galli, Annemarie M. C. van Rossum, Carlo Giaquinto, Magdalena Marczyńska, Laura Marquès, Filipa Prata, Luminiţa Ene, Liubov Okhonskaia, Pablo Rojo, Clàudia Fortuny, Lars Navér, Christoph Rudin, Sophie Le Cœur, Alla Volokha, Vanessa Rouzier, Regina C.M. Succi, Annette H. Sohn, Azar Kariminia, Andrew Edmonds, Patricia Lelo, Samuel Ayaya, Patricia Ong'wen, Laura Jefferys, Sam Phiri, Mwangelwa Mubiana‐Mbewe, Shobna Sawry, Lorna Renner, Mariam Sylla, Mark J. Abzug, Myron J. Levin, James M. Oleske, Miriam Chernoff, Shirley Traite, Murli Purswani, Ellen G. Chadwick, Ali Judd, Valériane Leroy
Software Mentions: 1
Published: over 8 years ago
10.1007/s11306-016-1104-8
Removing the bottlenecks of cell culture metabolomics: fast normalization procedure, correlation of metabolites to cell number, and impact of the cell harvesting method
Cited by: 55
Author(s): Caroline Muschet, Gabriele Möller, Cornelia Prehn, Martin Hrabé de Angelis, Jerzy Adamski, Janina Tokarz
Software Mentions: 1
Published: almost 10 years ago
10.1007/s11306-018-1388-y
Metabolomics reveals immunomodulation as a possible mechanism for the antibiotic effect of Persicaria capitata (Buch.-Ham. ex D. Don) H.Gross
Cited by: 6
Author(s): Pei Han, Yong Huang, Yumin Xie, Weichun Yang, Xiang Wenying, Peter J. Hylands, Cristina Legido‐Quigley
Software Mentions: 1
Published: about 8 years ago
10.3389/fimmu.2020.01652
Systematic Immunophenotyping Reveals Sex-Specific Responses After Painful Injury in Mice
Cited by: 18
Author(s): Vivianne L. Tawfik, Nolan A. Huck, Quentin Baca, Edward A. Ganio, Elena S. Haight, Anthony Culos, Sajjad Ghaemi, Thanaphong Phongpreecha, Martin S. Angst, James D. Clark, Nima Aghaeepour, Brice Gaudillière
Software Mentions: 1
Published: about 6 years ago
10.3390/mps2030062
Robust Normalization of Luciferase Reporter Data
Cited by: 5
Author(s): Andrea Repele, Manu Manu
Software Mentions: 1
Published: about 7 years ago
10.1038/s42003-018-0266-5
Field metabolic rates of teleost fishes are recorded in otolith carbonate
Cited by: 50
Author(s): Ming‐Tsung Chung, Clive N. Trueman, Jane Aanestad Godiksen, Mathias Engell Holmstrup, Peter Grønkjær
Software Mentions: 1
Published: over 7 years ago
10.14814/phy2.14869
Caffeine increases myoglobin expression via the cyclic AMP pathway in L6 myotubes
Cited by: 5
Author(s): Takumi Yokokawa, Takeshi Hashimoto, Nobumasa Iwanaka
Software Mentions: 1
Published: over 5 years ago
10.3390/cancers11081129
High Level Expression of MHC-II in HPV+ Head and Neck Cancers Suggests that Tumor Epithelial Cells Serve an Important Role as Accessory Antigen Presenting Cells
Cited by: 17
Author(s): Steven F. Gameiro, Farhad Ghasemi, John W. Barrett, Anthony C. Nichols, Joe S. Mymryk
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-020-57859-1
Exploring Patterns of Dynamic Size Changes of Lesions after Hepatic Microwave Ablation in an In Vivo Porcine Model
Cited by: 6
Author(s): Keno K. Bressem, Janis L. Vahldiek, Christoph Erxleben, Franz Poch, Seyd Shnaiyen, Beatrice Geyer, Kai S. Lehmann, Bernd Hamm, Stefan M. Niehues
Software Mentions: 1
Published: over 6 years ago
10.1016/j.chest.2020.10.077
The Value of Hemodynamic Measurements or Cardiac MRI in the Follow-up of Patients With Idiopathic Pulmonary Arterial Hypertension
Cited by: 16
Author(s): Cathelijne E. van der Bruggen, M. Louis Handoko, Harm Jan Bogaard, Johannes Timotheus Marcus, Franciscus Petrus Theodorus Oosterveer, Lilian J. Meijboom, Berend E. Westerhof, Anton Vonk‐Noordegraaf, Frances S. de Man
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-57564-z
Preventing traditional management can cause grassland loss within 30 years in southern Brazil
Cited by: 22
Author(s): Rafael Barbizan Sühs, Eduardo Luís Hettwer Giehl, Nivaldo Peroni
Software Mentions: 1
Published: over 6 years ago
10.3390/mps4030050
A Multistep Workflow to Evaluate Newly Generated iPSCs and Their Ability to Generate Different Cell Types
Cited by: 29
Author(s): Carol X.-Q. Chen, Narges Abdian, Gilles Maussion, Rhalena A. Thomas, Iveta Demirova, Eddie Cai, Mahdieh Tabatabaei, Lenore K. Beitel, Jason Karamchandani, Edward A. Fon, Thomas M. Durcan
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pgen.1005881
Liver-Enriched Gene 1, a Glycosylated Secretory Protein, Binds to FGFR and Mediates an Anti-stress Pathway to Protect Liver Development in Zebrafish
Cited by: 18
Author(s): Minjie Hu, Yun Bai, Chun Xia Zhang, Feng Liu, Zongbin Cui, Jun Chen, Jinrong Peng
Software Mentions: 1
Published: over 10 years ago
10.7717/peerj.1270
Improved estimates of age, growth and reproduction for the regionally endemic Galapagos sailfin grouper<i>Mycteroperca olfax</i>(Jenyns, 1840)
Cited by: 13
Author(s): Paolo Usseglio, Alan M. Friedlander, Edward E. DeMartini, Anna Schuhbauer, Eva Schemmel, Pelayo Salinas de León
Software Mentions: 1
Published: almost 11 years ago
10.1177/2041669520983339
No Evidence That Hormonal Contraceptives Affect Chemosensory Perception
Cited by: 3
Author(s): Martin Schaefer, Behzad Iravani, Artin Arshamian, Johan N. Lundström
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pgen.1002170
Genome-Wide Association Study Identifies HLA-DP as a Susceptibility Gene for Pediatric Asthma in Asian Populations
Cited by: 118
Author(s): Emiko Noguchi, Hiromi Sanada, Tomomitsu Hirota, Kaori Ochiai, Yoshimasa Imoto, Masafumi Sakashita, Fumitake Kurosaka, Akira Akasawa, Shigemi Yoshihara, Noriko Kanno, Yumi Yamada, Naoki Shimojo, Yoichi Kohno, Yôichi Suzuki, Mi Jin Kang, Ji Won Kwon, Soo Jong Hong, Ken Inoue, Yu Ichi Goto, Fumio Yamashita, Takashi Asada, Hiroshi Hara, Ikuo Saito, Shigeharu Fujieda, Nobuyuki Hizawa, Terufumi Sakamoto, Hironori Masuko, Yusuke Nakamura, Ichiro Nomura, Mayumi Tamari, Tadao Arinami, Teruhiko Yoshida, Hirohisa Saito, Kenji Matsumoto
Software Mentions: 1
Published: about 15 years ago
10.1038/s41598-020-58556-9
Cold-water coral (Lophelia pertusa) response to multiple stressors: High temperature affects recovery from short-term pollution exposure
Cited by: 13
Author(s): Alexis M. Weinnig, Carlos E. Gómez, Adam Hallaj, Erik E. Cordes
Software Mentions: 1
Published: over 6 years ago
10.1016/j.mex.2019.12.004
MITAS: A model for assessing the time-dependent risk of sequential applications of pesticides for soil organisms by consideration of exposure, degradation and mixture toxicity
Cited by: 1
Author(s): Alexandra Sybertz, Martina Roß-Nickoll, Andreas Schäffer, Björn Scholz-Starke, Benjamin Daniels, Andreas Schäffer
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pgen.1003495
High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates
Cited by: 239
Author(s): Gaurav Dugar, Alexander Herbig, Konrad U. Förstner, Nadja Heidrich, Richard Reinhardt, Kay Nieselt, Cynthia M. Sharma
Software Mentions: 1
Published: over 13 years ago
10.1038/s41598-020-58257-3
Effect of immediate cold formalin fixation on phosphoprotein IHC tumor biomarker signal in liver tumors using a cold transport device
Cited by: 4
Author(s): Melissa Lerch, Heidi L. Kenerson, David Chafin, Maria Westerhoff, Abbey Theiss, Michael Otter, Raymond S. Yeung, Geoffrey S. Baird
Software Mentions: 1
Published: over 6 years ago
10.1038/emi.2017.42
Humoral cross-reactivity between Zika and dengue viruses: implications for protection and pathology
Cited by: 83
Author(s): Lalita Priyamvada, William Henry Hudson, Rafi Ahmed, Jens Wrammert
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0221200
Covariates of diarrhoea among under-five children in India: Are they level dependent?
Cited by: 8
Author(s): Mala Ramanathan, Bevin Vijayan
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-020-59234-6
Characterization of HIV-1 diversity in various compartments at the time of primary infection by ultradeep sequencing
Cited by: 2
Author(s): Géraldine Gaube, Alix Armero, Maud Salmona, Marie-Laure Néré, Nadia Mahjoub, Caroline Lascoux-Combe, Audrey Gabassi, Sébastien Gallien, Ali Amara, Jean Michel Molina, Constance Delaugerre, Marie‐Laure Chaix
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-59579-y
Identification of flocculant wine yeast strains with improved filtration-related phenotypes through application of high-throughput sedimentation rate assays
Cited by: 7
Author(s): Cristián Varela, Caroline Bartel, Damian Espinase Nandorfy, Anthony R. Borneman, Simon A. Schmidt, Chris Curtin
Software Mentions: 1
Published: over 6 years ago
10.1186/s12885-018-5254-0
Programmed cell death ligand 1 (PD-L1, CD274) in cholangiocarcinoma – correlation with clinicopathological data and comparison of antibodies
Cited by: 28
Author(s): Mark Kriegsmann, Stephanie Roessler, Katharina Kriegsmann, Marcus Renner, Rémi Longuespée, Thomas Albrecht, M. Loeffler, Stephan Singer, Arianeb Mehrabi, Monika Vogel, Anita Pathil, Bruno Köhler, Christoph Springfeld, Christian Rupp, Karl Heinz Weiss, Benjamin Goeppert
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0032146
Human Platelet-Rich Plasma- and Extracellular Matrix-Derived Peptides Promote Impaired Cutaneous Wound Healing In Vivo
Cited by: 56
Author(s): Tatiana N. Demidova-Rice, Lindsey N. Wolf, Jeffry Deckenback, Michael R. Hamblin, Ira M. Herman
Software Mentions: 1
Published: over 14 years ago
10.1080/22221751.2020.1780949
<i>Clostridioides difficile</i> ribotypes 001 and 126 were predominant in Tehran healthcare settings from 2004 to 2018: a 14-year-long cross-sectional study
Cited by: 21
Author(s): Masoumeh Azimirad, Marcela Krutova, Abbas Yadegar, Shabnam Shahrokh, Meysam Olfatifar, Hamid Asadzadeh Aghdaei, Warren N. Fawley, Mark H. Wilcox, Mohammad Reza Zali
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-59839-x
Genomic scan of selective sweeps in Djallonké (West African Dwarf) sheep shed light on adaptation to harsh environments
Cited by: 15
Author(s): Isabel Álvarez, Amadou Traoré, L. Pérez‐Pardal, Nuria A. Menéndez‐Arias, F. Goyache
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.62668
Virtual conferences raise standards for accessibility and interactions
Cited by: 79
Author(s): Sarvenaz Sarabipour
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0211544
Understanding the prevalence of bear part consumption in Cambodia: A comparison of specialised questioning techniques
Cited by: 25
Author(s): Elizabeth Davis, Brian Crudge, Thona Lim, D.A. O'Connor, Vichet Roth, Matt Hunt, Jenny Anne Glikman
Software Mentions: 1
Published: over 7 years ago
10.1186/s13007-020-00677-3
A heat-shock inducible system for flexible gene expression in cereals
Cited by: 5
Author(s): Sophie A Harrington, Anna E Backhaus, Samantha Fox, Christian Rogers, Philippa Borrill, Cristóbal Uauy, Annis Richardson
Software Mentions: 1
Published: almost 6 years ago
10.1016/j.mex.2020.100977
Optimizing pollencounter for high throughput phenotyping of pollen quality in tomatoes
Cited by: 4
Author(s): Mathieu Anatole Tele Ayenan, Agyemang Danquah, Charles Ampomah‐Dwamena, Peter Hanson, Isaac Asante, Eric Danquah
Software Mentions: 1
Published: over 6 years ago
10.1038/s41426-018-0109-y
Swine influenza viruses in Northern Vietnam in 2013–2014
Cited by: 19
Author(s): Eugénie Baudon, Daniel K.W. Chu, Tung Duy Dao, Pham Thi Quynh Nga, Hoang Vu Mai Phuong, Nguyễn Lê Khánh Hằng, Le Thị Thanh, Nguyễn Thanh Thủy, Nguyễn Công Khanh, Lê Quynh, Nguyen Viet Khong, Benjamin J. Cowling, Marisa Peyre, Malik Peiris
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-020-60101-7
Toxicological response of the model fungus Saccharomyces cerevisiae to different concentrations of commercial graphene nanoplatelets
Cited by: 11
Author(s): María Suárez-Diez, Santiago Porras, Felix Laguna-Teno, Peter J. Schaap, Juan Antonio Tamayo-Ramos
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-60440-5
Clinical significance of circulating soluble immune checkpoint proteins in sorafenib-treated patients with advanced hepatocellular carcinoma
Cited by: 38
Author(s): Minh Phuong Dong, Masaru Enomoto, Lê Thị Thanh Thủy, Hai Hoang, Vu Ngoc Hieu, Dinh Viet Hoang, Ayako Iida‐Ueno, Naoshi Odagiri, Yuga Amano-Teranishi, Atsushi Hagihara, Hideki Fujii, Sawako Uchida‐Kobayashi, Norifumi Kawada
Software Mentions: 1
Published: over 6 years ago
10.3389/fimmu.2020.01360
Inhibiting DNA Methylation Improves Survival in Severe Sepsis by Regulating NF-κB Pathway
Cited by: 26
Author(s): Luxi Cao, Tingting Zhu, Xiabing Lang, Jingquan Sha, Yi Yang, Chaohong Zhu, Yucheng Wang, Shi Feng, Cuili Wang, Ping Zhang, Jianghua Chen, Hong Jiang
Software Mentions: 1
Published: about 6 years ago
10.4269/ajtmh.18-0018
Impact of Ivermectin Mass Drug Administration for Lymphatic Filariasis on Scabies in Eight Villages in Kongwa District, Tanzania
Cited by: 19
Author(s): Diana L. Martin, Ryan E. Wiegand, Brook Goodhew, Patrick J. Lammie, Harran Mkocha, Mabula Kasubi
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-020-60269-y
Cell surface GRP78 promotes stemness in normal and neoplastic cells
Cited by: 29
Author(s): Clay Conner, Tyson W. Lager, Ian H. Guldner, Min-Zu Wu, Yuriko Hishida, Tomoaki Hishida, Sergio Ruíz, Amanda E. Yamasaki, Robert Christopher Gilson, Juan Carlos Izpisúa Belmonte, Peter C. Gray, Jonathan A. Kelber, Siyuan Zhang, Athanasia D. Panopoulos
Software Mentions: 1
Published: over 6 years ago
10.1186/s12885-021-07837-1
Novel immune-related genes in the tumor microenvironment with prognostic value in breast cancer
Cited by: 7
Author(s): Wen Tan, Maomao Liu, Liangshan Wang, Yang Guo, Chunhong Wei, Shuqi Zhang, Chengyu Luo, Nan Liu
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-60565-7
Type 2 diabetes mellitus compromises the survival of diffuse large B-cell lymphoma patients treated with (R)-CHOP – the PLRG report
Cited by: 9
Author(s): Joanna Drozd-Sokołowska, Jan Maciej Zaucha, Przemysław Biecek, Agnieszka Giza, Katarzyna Kobylińska, Monika Joks, Tomasz Wróbel, Beata Kumiega, Wanda Knopińska‐Posłuszny, Wojciech Spychałowicz, Joanna Romejko‐Jarosińska, Joanna Fischer, W Wiktor-Jedrzejczak, Monika Długosz‐Danecka, Sebastian Giebel, Wojciech Jurczak
Software Mentions: 1
Published: over 6 years ago
10.7717/peerj.8079
Identification of novel genes associated with litter size of indigenous sheep population in Xinjiang, China using specific-locus amplified fragment sequencing technology
Cited by: 9
Author(s): Haijun Ma, Chao Fang, Lingling Liu, Qiong Wang, Jueken Aniwashi, Yiming Sulaiman, Kezierkailedi Abudilaheman, Wujun Liu
Software Mentions: 1
Published: over 6 years ago
10.1186/s12934-021-01589-0
Evaluation of fecal microbiota transplantation in Parkinson's disease patients with constipation
Cited by: 62
Author(s): Xiaoyi Kuai, Xiaohan Yao, Lijuan Xu, Yuqing Zhou, Liping Zhang, Yi Liu, Shaofang Pei, Chunli Zhou
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-60505-5
A Markov chain method for counting and modelling migraine attacks
Cited by: 6
Author(s): Mathias Barra, Fredrik A. Dahl, Kjersti Grøtta Vetvik, Anne MacGregor
Software Mentions: 1
Published: over 6 years ago
10.1186/1475-2859-12-72
Metabolic engineering of Bacillus subtilis for growth on overflow metabolites
Cited by: 37
Author(s): Johannes Kabisch, Isabel Pratzka, Hanna Meyer, Dirk Albrecht, Michael Lalk, Armin Ehrenreich, Thomas Schweder
Software Mentions: 1
Published: about 13 years ago
10.7554/eLife.65420
A common 1.6 mb Y-chromosomal inversion predisposes to subsequent deletions and severe spermatogenic failure in humans
Cited by: 14
Author(s): Pille Hallast, Laura Kibena, Margus Punab, Elena Arciero, Siiri Rootsi, Marina Grigorova, Rodrigo Flores, Mark A. Jobling, Olev Poolamets, Kristjan Pomm, Paul Korrovits, Kristiina Rull, Yali Xue, Chris Tyler‐Smith, Maris Laan
Software Mentions: 1
Published: over 5 years ago
10.7717/peerj.5149
Hi-MC: a novel method for high-throughput mitochondrial haplogroup classification
Cited by: 10
Author(s): Sandra P. Smieszek, Sabrina L. Mitchell, Eric Farber‐Eger, Olivia J. Veatch, Nicholas R. Wheeler, Robert Goodloe, Quinn S. Wells, Deborah G. Murdock, Dana C. Crawford
Software Mentions: 1
Published: about 8 years ago
10.1007/s00248-020-01586-7
16S rRNA Gene Copy Number Normalization Does Not Provide More Reliable Conclusions in Metataxonomic Surveys
Cited by: 40
Author(s): Robert M. Starke, Victor Satler Pylro, Daniel Morais
Software Mentions: 1
Published: almost 6 years ago
10.1007/s00248-017-0996-9
An 18S rRNA Workflow for Characterizing Protists in Sewage, with a Focus on Zoonotic Trichomonads
Cited by: 30
Author(s): Julia M. Maritz, Krysta H. Rogers, Tara M. Rock, Nicole Liu, Susan Joseph, Kirkwood M. Land, Jane M. Carlton
Software Mentions: 1
Published: about 9 years ago
10.3389/fimmu.2021.674871
Keratinocyte-Immune Cell Crosstalk in a STAT1-Mediated Pathway: Novel Insights Into Rosacea Pathogenesis
Cited by: 13
Author(s): Zhili Deng, Fangfen Liu, Mengting Chen, Chuchu Huang, Wenqin Xiao, Sini Gao, Dan Jian, Yuyan Ouyang, San Xu, Jinmao Li, Shi Qian, Hongfu Xie, Guohong Zhang, Ji Li
Software Mentions: 1
Published: about 5 years ago
10.3389/fimmu.2019.00116
Ultra-Sensitive CSF3R Deep Sequencing in Patients With Severe Congenital Neutropenia
Cited by: 12
Author(s): Maksim Klimiankou, Murat Uenalan, Siarhei Kandabarau, R. Nustede, I. Steiert, Sabine Mellor-Heineke, Cornelia Zeidler, Julia Skokowa, Karl Welte
Software Mentions: 1
Published: over 7 years ago
10.3390/ijms22158140
Monitoring Human Milk β-Casein Phosphorylation and O-Glycosylation Over Lactation Reveals Distinct Differences between the Proteome and Endogenous Peptidome
Cited by: 18
Author(s): Kelly A. Dingess, Inge Gazi, Henk W. P. van den Toorn, Marko Mank, Bernd Stahl, Karli R. Reiding, Albert J. R. Heck
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-020-61050-x
Highly regional population structure of Spondyliosoma cantharus depicted by nuclear and mitochondrial DNA data
Cited by: 3
Author(s): Ana Neves, Alberto Vieira, Vera Sequeira, Rafaela Barros Paiva, Leonel Serrano Gordo, Octávio S. Paulo
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0186499
Determinants of site of tuberculosis disease: An analysis of European surveillance data from 2003 to 2014
Cited by: 28
Author(s): Giovanni Sotgiu, Dennis Falzon, Vahur Hollo, Csaba Ködmön, Nicolas Lefèbvre, Andrei Dadu, Marieke van der Werf
Software Mentions: 1
Published: almost 9 years ago
10.1080/22221751.2020.1791737
Shotgun proteomics analysis of SARS-CoV-2-infected cells and how it can optimize whole viral particle antigen production for vaccines
Cited by: 60
Author(s): Lucia Grenga, Fabrice Gallais, Olivier Pible, Jean Charles Gaillard, Duarte Gouveia, Hélène Batina, Niza Bazaline, Sylvie Ruat, Karen Culotta, Guylaine Miotello, Stéphanie Debroas, Marie Anne Roncato, Gérard Steinmetz, Charlotte Foissard, Anne Desplan, Béatrice Alpha-Bazin, Christine Almunia, Fabienne Gas, Laurent Bellanger, Jean Armengaud
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-60504-6
Western gorilla space use suggests territoriality
Cited by: 10
Author(s): Robin E. Morrison, Jacob C. Dunn, Germán Illera, Peter Walsh, Magdalena Bermejo
Software Mentions: 1
Published: over 6 years ago
10.1186/s12885-021-08108-9
Multi gene mutation signatures in colorectal cancer patients: predict for the diagnosis, pathological classification, staging and prognosis
Cited by: 19
Author(s): Yan Zhuang, Hailong Wang, Da Jiang, Ying Liu, Lixia Feng, Caijuan Tian, Mingyu Pu, Xiaowei Wang, Jiangyan Zhang, Y. Hu, Pengfei Liu
Software Mentions: 1
Published: over 5 years ago
10.18632/aging.202322
Identification of novel SNPs associated with coronary artery disease and birth weight using a pleiotropic cFDR method
Cited by: 1
Author(s): Xinrui Wu, Xu Lin, Qi Li, Zun Wang, Na Zhang, Mengyuan Tian, Xiaolei Wang, Hong‐Wen Deng, Hongzhuan Tan
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms7120616
Changes of Root Endophytic Bacterial Community Along a Chronosequence of Intensively Managed Lei Bamboo (Phyllostachys praecox) Forests in Subtropical China
Cited by: 8
Author(s): Xiaoping Zhang, Zheke Zhong, Xu Gai, Xuhua Du, Fangyuan Bian, Cunjian Yang, Guibin Gao, Wen Xing
Software Mentions: 1
Published: over 6 years ago
10.3389/fimmu.2018.00655
Diverse Epitope Specificity, Immunodominance Hierarchy, and Functional Avidity of Effector CD4 T Cells Established During Priming Is Maintained in Lung After Influenza A Virus Infection
Cited by: 6
Author(s): Katherine A. Richards, Anthony DiPiazza, Ajitanuj Rattan, Zackery A. G. Knowlden, Hongmei Yang, Andrea J. Sant
Software Mentions: 1
Published: over 8 years ago