cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0215563

Quality of postoperative pain management in Ethiopia: A prospective longitudinal study
Cited by: 30
Author(s): Million Tesfaye Eshete, Petra I. Baeumler, Matthias Siebeck, Markos Tesfaye, Abraham Haileamlak, Girma G. Michael, Yemane Ayele, Dominik Irnich
Software Mentions: 1
Published: over 5 years ago

10.3390/nu12020278

Gut Microbiota Profile of Obese Diabetic Women Submitted to Roux-en-Y Gastric Bypass and Its Association with Food Intake and Postoperative Diabetes Remission
Cited by: 44
Author(s): Karina Al Assal, Edi Prifti, Eugeni Belda, Priscila Sala, Karine Clément, Maria-Carlota Dao, Joël Doré, Florence Levenez, Carla Romano Taddei, Danielle Cristina Fonseca, Ilanna Marques Gomes da Rocha, Bianca Depieri Balmant, Andrew Maltez Thomas, Marco Aurélio Santo, Emmanuel Dias-Neto, João Carlos Setúbal, Jean-Daniel Zucker, G. Belarmino, Raquel Susana Torrinhas, Dan Linetzky Waitzberg
Software Mentions: 1
Published: almost 5 years ago

10.3390/brainsci11020260

Chronic Mild Unpredictable Stress and High-Fat Diet Given during Adolescence Impact Both Cognitive and Noncognitive Behaviors in Young Adult Mice
Cited by: 7
Author(s): Stephen L.P. Lippi
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pone.0240486

Potential application of Pseudomonas stutzeri W228 for removal of copper and lead from marine environments
Cited by: 7
Author(s): Carolina Coelho da Costa Waite, Guilherme Oliveira Andrade da Silva, José Augusto Pires Bitencourt, Luciana Pereira Torres Chequer, Simone Pennafirme, Diogo Jurelevicius, Lucy Seldin, Mírian Araújo Carlos Crapez
Software Mentions: 1
Published: about 4 years ago

10.3390/brainsci11060704

The Association between Difficulties with Speech Fluency and Language Skills in a National Age Cohort of Children with Down Syndrome
Cited by: 3
Author(s): K Naess, Egil Nygaard, Hilde Hofslundsengen, J. Scott Yaruss
Software Mentions: 1
Published: over 3 years ago

10.3390/nu13082543

One-Week High-Dose β-Alanine Loading Improves World Tour Cyclists’ Time-Trial Performance
Cited by: 1
Author(s): Vicente Ávila-Gandía, Antonio Torregrosa-García, Silvia Pérez-Piñero, Raquel Ortolano, María Salud Abellán-Ruiz, Francisco Javier López-Román
Software Mentions: 1
Published: over 3 years ago

10.1016/j.dib.2020.106336

Data on draft genome sequence of Caldanaerobacter sp. strain 1523vc, a thermophilic bacterium, isolated from a hot spring of Uzon Caldera, (Kamchatka, Russia)
Cited by: 2
Author(s): Aleksei A. Korzhenkov, Stepan V. Toshchakov, Olga A. Podosokorskaya, М. В. Патрушев, Ilya V. Kublanov
Software Mentions: 1
Published: about 4 years ago

10.3389/fnagi.2019.00293

Proteome Profiling of Cerebral Vessels in Rhesus Macaques: Dysregulation of Antioxidant Activity and Extracellular Matrix Proteins Contributes to Cerebrovascular Aging in Rhesus Macaques
Cited by: 8
Author(s): Xia Wang, Yifan Liu, Yangjie Jia, Haotian Liu, Xinjie Bao, Zhanlong He, Wei Ge
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0108651

Barcoding Beetles: A Regional Survey of 1872 Species Reveals High Identification Success and Unusually Deep Interspecific Divergences
Cited by: 146
Author(s): Mikko Pentinsaari, Paul D. N. Hebert, Marko Mutanen
Software Mentions: 1
Published: about 10 years ago

10.1186/s12864-019-6189-9

Capture of complete ciliate chromosomes in single sequencing reads reveals widespread chromosome isoforms
Cited by: 8
Author(s): Kelsi Lindblad, Jananan S. Pathmanathan, Sandrine Moreira, John R. Bracht, Robert Sebra, Elizabeth Hutton, Laura F. Landweber
Software Mentions: 1
Published: about 5 years ago

10.3389/fnagi.2020.576627

Graph Theory Analysis Reveals Resting-State Compensatory Mechanisms in Healthy Aging and Prodromal Alzheimer’s Disease
Cited by: 26
Author(s): Qumars Behfar, Stefan Kambiz Behfar, Boris von Reutern, Nils Richter, Julian Dronse, Ronja Fassbender, Gereon R. Fink, Oezguer A. Onur
Software Mentions: 1
Published: about 4 years ago

10.1007/s11682-016-9626-2

Associations between genetic risk, functional brain network organization and neuroticism
Cited by: 15
Author(s): Michelle N. Servaas, Linda Geerligs, Jojanneke A. Bastiaansen, Remco Renken, Jan-Bernard C Marsman, Ilja M. Nolte, Johan Ormel, André Alemán, Harriëtte Riese
Software Mentions: 1
Published: about 8 years ago

10.1007/s10928-019-09632-9

Development of visual predictive checks accounting for multimodal parameter distributions in mixture models
Cited by: 7
Author(s): Usman Arshad, Estelle Chasseloup, Rikard Nordgren, Mats O. Karlsson
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.6987

Help or hindrance? The evolutionary impact of whole‐genome duplication on immunogenetic diversity and parasite load
Cited by: 0
Author(s): Ellen Bell, Joanne Cable, Cláudio Oliveira, David S. Richardson, Levi Yant, Martin I. Taylor
Software Mentions: 1
Published: about 4 years ago

10.1093/braincomms/fcaa068

Progressive dysexecutive syndrome due to Alzheimer’s disease: a description of 55 cases and comparison to other phenotypes
Cited by: 68
Author(s): Ryan A. Townley, Jonathan Graff‐Radford, William G. Mantyh, Hugo Botha, Angelina J. Polsinelli, Scott A. Przybelski, Mary M. Machulda, Ahmed T Makhlouf, Matthew L. Senjem, Melissa E. Murray, R. Ross Reichard, Rodolfo Savica, Bradley F. Boeve, Daniel A. Drubach, Keith A. Josephs, David S. Knopman, Val J. Lowe, Clifford R. Jack, Ronald C. Petersen, David T. Jones
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pntd.0004315

Surveillance and Control of Aedes albopictus in the Swiss-Italian Border Region: Differences in Egg Densities between Intervention and Non-intervention Areas
Cited by: 22
Author(s): Tobias Suter, Eleonora Flacio, Begoña Feijoó Fariña, Lukas Engeler, Mauro Tonolla, Lêda Regis, Maria Angélica Borges dos Santos, Pie Müller
Software Mentions: 1
Published: almost 9 years ago

10.3389/fnbeh.2015.00355

Assessing Fear Following Retrieval + Extinction Through Suppression of Baseline Reward Seeking vs. Freezing
Cited by: 14
Author(s): Jason Shumake, Marie‐H. Monfils
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pntd.0004425

Exposure versus Susceptibility as Alternative Bases for New Approaches to Surveillance for Schistosoma japonicum in Low Transmission Environments
Cited by: 5
Author(s): Shuo Wang, Robert C. Spear
Software Mentions: 1
Published: over 8 years ago

10.1007/s10928-017-9550-0

Model selection and averaging of nonlinear mixed-effect models for robust phase III dose selection
Cited by: 26
Author(s): Yasunori Aoki, Daniel Röshammar, Bengt Hamrén, Andrew C. Hooker
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-13-703

Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture
Cited by: 66
Author(s): Long Zhou, Jason A. Holliday
Software Mentions: 1
Published: almost 13 years ago

10.1093/braincomms/fcab098

Updating beliefs beyond the here-and-now: the counter-factual self in anosognosia for hemiplegia
Cited by: 10
Author(s): Louise P. Kirsch, Christoph Mathys, Christina Papadaki, Penelope Talelli, Karl J. Friston, Valentina Moro, Aikaterini Fotopoulou
Software Mentions: 1
Published: over 3 years ago

10.1016/j.bbih.2021.100318

Microbially-derived short-chain fatty acids impact astrocyte gene expression in a sex-specific manner
Cited by: 20
Author(s): Simon Spichak, Francisco Donoso, Gerard M. Moloney, Eoin Gunnigle, Jillian R. Brown, Martín Gabriel Codagnone, Timothy G. Dinan, John F. Cryan
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pntd.0006607

Evaluation of the rSP03B sero-strip, a newly proposed rapid test for canine exposure to Phlebotomus perniciosus, vector of Leishmania infantum
Cited by: 9
Author(s): Laura Willen, Pascal Mertens, Petr Volf
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pntd.0007832

Field study of the improved rapid sand fly exposure test in areas endemic for canine leishmaniasis
Cited by: 8
Author(s): Laura Willen, Tereza Leštinová, Barbora Kalousková, Petra Sumová, Tatiana Spitzová, Rita Velez, E. Domenech, Ondřej Vaněk, Montserrat Gállego, Pascal Mertens, Petr Volf
Software Mentions: 1
Published: about 5 years ago

10.1016/j.bbi.2020.09.011

Inflammatory and cardiometabolic markers at presentation with first episode psychosis and long-term clinical outcomes: A longitudinal study using electronic health records
Cited by: 11
Author(s): Emanuele F. Osimo, Benjamin Ian Perry, Rudolf N. Cardinal, Mary-Ellen Lynall, Jonathan Lewis, Arti Kudchadkar, Graham K. Murray, Jesús Pérez, Peter B. Jones, Golam M. Khandaker
Software Mentions: 1
Published: almost 4 years ago

10.3389/fnbeh.2020.612313

The PEDtracker: An Automatic Staging Approach for Drosophila melanogaster Larvae
Cited by: 6
Author(s): Isabell Schumann, Tilman Triphan
Software Mentions: 1
Published: almost 4 years ago

10.1016/j.dib.2021.106759

Application of one-, three-, and seven-day forecasts during early onset on the COVID-19 epidemic dataset using moving average, autoregressive, autoregressive moving average, autoregressive integrated moving average, and naïve forecasting methods
Cited by: 5
Author(s): Christopher J. Lynch, Ross Gore
Software Mentions: 1
Published: over 3 years ago

10.1093/brain/awaa104

Distinctive binding properties of human monoclonal LGI1 autoantibodies determine pathogenic mechanisms
Cited by: 62
Author(s): Melanie Ramberger, Antonio Berretta, Jeanne M.M. Tan, Bo Sun, Sophia Michael, Tianrong Yeo, Jakob Theorell, Rachael Bashford-Rogers, Sofija Paneva, Victoria O’Dowd, Neesha Dedi, Sarfaraj Topia, Robert Griffin, Jorge Ramírez‐Franco, Oussama El Far, Stéphanie Baulac, Maria Isabel Leite, Arjune Sen, Alexander Jeans, David McMillan, Diane Marshall, Daniel C. Anthony, Daniel Lightwood, Patrick Waters, Sarosh R. Irani
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pntd.0005337

Intensive trapping of blood-fed Anopheles darlingi in Amazonian Peru reveals unexpectedly high proportions of avian blood-meals
Cited by: 36
Author(s): Marta Moreno, Marlon P. Saavedra, Sara A. Bickersmith, Catharine Prussing, Adrian Michalski, Carlos Tong Rios, Joseph M. Vinetz, Jan E. Conn
Software Mentions: 1
Published: almost 8 years ago

10.1007/s00259-019-04305-8

Cross-interaction of tau PET tracers with monoamine oxidase B: evidence from in silico modelling and in vivo imaging
Cited by: 65
Author(s): N. Murugan, Konstantinos Chiotis, Elena Rodriguez‐Vieitez, Laëtitia Lemoine, Hans Ågren, Agneta Nordberg
Software Mentions: 1
Published: over 5 years ago

10.1016/j.dib.2019.103757

Data on draft genome sequence of Bacillus sp. strain VKPM B-3276 isolated from Culex pipiens larvae
Cited by: 3
Author(s): V.V. Zinina, Aleksei A. Korzhenkov, A.V. Tepliuk, A.A. Kanikovskaja, М. В. Патрушев, Ilya V. Kublanov, Stepan V. Toshchakov
Software Mentions: 1
Published: over 5 years ago

10.1038/s41416-019-0565-8

Combined poly-ADP ribose polymerase and ataxia-telangiectasia mutated/Rad3-related inhibition targets ataxia-telangiectasia mutated-deficient lung cancer cells
Cited by: 33
Author(s): Nicholas Jette, Suraj Radhamani, Greydon Arthur, Ruiqiong Ye, Siddhartha Goutam, Anthony Bolyos, L. Petersen, Pinaki Bose, D. Gwyn Bebb, Susan P. Lees‐Miller
Software Mentions: 1
Published: about 5 years ago

10.1186/s12859-021-04034-6

PnB Designer: a web application to design prime and base editor guide RNAs for animals and plants
Cited by: 180
Author(s): Sebastian M. Siegner, Mehmet E. Karasu, Markus S. Schröder, Zacharias Kontarakis, Jacob E. Corn
Software Mentions: 1
Published: almost 4 years ago

10.3389/fbioe.2020.566984

Identification and Characterization of Circular RNA as a Novel Regulator and Biomarker in Preterm Birth
Cited by: 7
Author(s): Yuxin Ran, Ning Yin, Dongni Huang, Yangyu Zhao, Jing Yang, Hanwen Zhang, Hongbo Qi
Software Mentions: 1
Published: about 4 years ago

10.1016/j.dib.2019.104690

Dataset of plant community composition in the Zumwalt Prairie Preserve, Oregon, USA
Cited by: 2
Author(s): Bryan A. Endress, Joshua P. Averett
Software Mentions: 1
Published: about 5 years ago

10.1038/s41396-019-0445-5

Pyrethroid exposure alters internal and cuticle surface bacterial communities in Anopheles albimanus
Cited by: 39
Author(s): Nsa Dada, Juan C. Lol, Ana Cristina Benedict, Francisco López, Mili Sheth, Nicole Dzuris, Norma Padilla, Audrey Lenhart
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-015-1678-y

Characterization of a second secologanin synthase isoform producing both secologanin and secoxyloganin allows enhanced de novo assembly of a Catharanthus roseus transcriptome
Cited by: 49
Author(s): Thomas Dugé de Bernonville, Emilien Foureau, Claire Parage, Arnaud Lanoue, Marc Clastre, Monica Arias Londono, Audrey Oudin, Benjamin Houillé, Nicolas Papon, Sébastien Besseau, Gaëlle Glévarec, Lucía Atehortúa, Nathalie Giglioli-Guivarc’h, Benoit St-Pierre, Vincenzo De Luca, Sarah E. O’Connor, Vincent Courdavault
Software Mentions: 1
Published: over 9 years ago

10.1111/bdi.13016

Bipolar disorder: Trimodal age‐at‐onset distribution
Cited by: 25
Author(s): Sorcha Bolton, Jeremy Warner, Eli Harriss, John Geddes, Kate Saunders
Software Mentions: 1
Published: about 4 years ago

10.1186/s12859-021-04324-z

LLAMA: a robust and scalable machine learning pipeline for analysis of large scale 4D microscopy data: analysis of cell ruffles and filopodia
Cited by: 1
Author(s): James G. Lefevre, Yvette W. H. Koh, Adam A. Wall, Nicholas D. Condon, Jennifer L. Stow, Nicholas A. Hamilton
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pntd.0008325

Ultra-sensitive detection of Mycobacterium leprae: DNA extraction and PCR assays
Cited by: 15
Author(s): Fernanda Saloum de Neves Manta, Thyago Leal-Calvo, Suelen Justo Maria Moreira, B.L.C. Marques, Marcelo Ribeiro-Alves, Patrícia Sammarco Rosa, José A. C. Nery, Rita de Cássia Pontello Rampazzo, Alexandre Dias Tavares Costa, Marco Aurélio Krieger, Milton Ozório Moraes
Software Mentions: 1
Published: over 4 years ago

10.1016/j.dib.2020.106519

Prothrombotic hemostasis disturbances in patients with severe COVID-19: Individual daily data
Cited by: 18
Author(s): Michaël Hardy, Isabelle Michaux, Sarah Lessire, Jonathan Douxfils, Jean‐Michel Dogné, Marion Bareille, Geoffrey Horlait, Pierre Bulpa, Céline Chapelle, Silvy Laporte, Sophie Testa, Hugues Jacqmin, T. Lecompte, Alain Dive, François Mullier
Software Mentions: 1
Published: about 4 years ago

10.3390/ani10111953

Integrative Analysis of Energy Partition Patterns and Plasma Metabolomics Profiles of Modern Growing Pigs Raised at Different Ambient Temperatures
Cited by: 6
Author(s): Shuai Zhang, Hang Gao, Xiongkun Yuan, Junjun Wang, Jianjun Zang
Software Mentions: 1
Published: about 4 years ago

10.1186/s12864-019-6355-0

A ligation-based single-stranded library preparation method to analyze cell-free DNA and synthetic oligos
Cited by: 46
Author(s): Christopher J. Troll, Joshua D. Kapp, Varsha Rao, Kelly M. Harkins, Charles N. Cole, Colin Naughton, Joe P. Morgan, Beth Shapiro, Edward Green
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-016-3081-8

Exome genotyping, linkage disequilibrium and population structure in loblolly pine (Pinus taeda L.)
Cited by: 43
Author(s): Mi Lu, Konstantin V. Krutovsky, C. Dana Nelson, Tomasz E. Koralewski, Thomas D. Byram, Carol A. Loopstra
Software Mentions: 1
Published: about 8 years ago

10.3389/fbioe.2019.00365

Prediction of circRNAs Based on the DNA Methylation-Mediated Feature Sponge Function in Breast Cancer
Cited by: 8
Author(s): Yue Gu, Ce Ci, Xingda Zhang, Mu Chun Su, Wenhua Lv, Chuangeng Chen, Liu Hui, Dongwei Zhang, Shumei Zhang, Yan Zhang
Software Mentions: 1
Published: about 5 years ago

10.3389/fbioe.2020.530067

Changes in Bacterial Community Structure and Enriched Functional Bacteria Associated With Turfgrass Monoculture
Cited by: 3
Author(s): Chang-Wook Jeon, Da-Ran Kim, Eun‐Ji Bae, Youn‐Sig Kwak
Software Mentions: 1
Published: almost 4 years ago

10.1186/s13068-019-1479-7

Genetic variation of biomass recalcitrance in a natural Salix viminalis (L.) population
Cited by: 16
Author(s): Jonas Ohlsson, Henrik R. Hallingbäck, Mohamed Jebrane, Anne E. Harman‐Ware, Todd Shollenberger, Stephen R. Decker, Mats Sandgren, Ann Christin Rönnberg‐Wästljung
Software Mentions: 1
Published: over 5 years ago

10.1186/s13068-020-01757-1

Time-resolved multi-omics analysis reveals the role of nutrient stress-induced resource reallocation for TAG accumulation in oleaginous fungus Mortierella alpina
Cited by: 24
Author(s): Hengqian Lu, Haiqin Chen, Xin Tang, Qin Yang, Hao Zhang, Yong Q. Chen, Wei Chen
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pntd.0006495

Atypical pharmacology of schistosome TRPA1-like ion channels
Cited by: 17
Author(s): Swarna Bais, Corbett T. Berry, Xiaohong Liu, Gordon Ruthel, Bruce D. Freedman, Robert M. Greenberg
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-020-6557-5

Comparison of the performance of an amplicon sequencing assay based on Oxford Nanopore technology to real-time PCR assays for detecting bacterial biodefense pathogens
Cited by: 16
Author(s): Robert A. Player, Kathleen Verratti, Andrea Staab, Christopher Bradburne, Sarah L. Grady, Bruce G. Goodwin, Shanmuga Sozhamannan
Software Mentions: 1
Published: almost 5 years ago

10.1016/j.dib.2018.09.103

Integrated dataset on acute phase protein response in chicken challenged with Escherichia coli lipopolysaccharide endotoxin
Cited by: 10
Author(s): Anita Horvatić, Nicolas Guillemin, Haider Tuma Kaab, Dorothy McKeegan, Emily O'Reilly, M. Bain, Josipa Kuleš, P.D. Eckersall
Software Mentions: 1
Published: about 6 years ago

10.3389/fbioe.2019.00271

MoCloFlex: A Modular Yet Flexible Cloning System
Cited by: 6
Author(s): Carlo Klein, Leonie Emde, Aaron Kuijpers, Patrick Sobetzko
Software Mentions: 1
Published: about 5 years ago

10.1186/s13068-019-1443-6

Effects of H2:CO2 ratio and H2 supply fluctuation on methane content and microbial community composition during in-situ biological biogas upgrading
Cited by: 67
Author(s): Radziah Wahid, Daniel Girma Mulat, John Christian Gaby, Svein Jarle Horn
Software Mentions: 1
Published: over 5 years ago

10.3389/fbioe.2020.00662

Mendelian Randomization Analysis Reveals a Causal Effect of Urinary Sodium/Urinary Creatinine Ratio on Kidney Function in Europeans
Cited by: 2
Author(s): Yuemiao Zhang, Jie Zheng, Tom R. Gaunt, Hong Zhang
Software Mentions: 1
Published: over 4 years ago

10.1186/s12864-017-3484-1

Diet, gonadal sex, and sex chromosome complement influence white adipose tissue miRNA expression
Cited by: 38
Author(s): Jenny Link, Yehudit Hasin-Brumshtein, Rita M. Cantor, Xuqi Chen, Arthur P. Arnold, Aldons J. Lusis, Karen Reue
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pntd.0005624

Radiological evolution of porcine neurocysticercosis after combined antiparasitic treatment with praziquantel and albendazole
Cited by: 7
Author(s): Carla Cangalaya, Javier A. Bustos, Juan Calcina, Ana Vargas-Calla, Javier Mamani, Diego Suarez, Gianfranco Arroyo, Armando E. González, Juan Chacaltana, Cristina Guerra‐Giraldez, Siddhartha Mahanty, Theodore E. Nash, Héctor H. Garcı́a
Software Mentions: 1
Published: over 7 years ago

10.1186/s13068-020-01770-4

Carbon migration and metagenomic characteristics during anaerobic digestion of rice straw
Cited by: 7
Author(s): Dadi Chen, Xiaoyu Zuo, Juan Li, Xitong Wang, Jie Liu
Software Mentions: 1
Published: over 4 years ago

10.3390/bios11080286

In Vitro Anticancer Drug Sensitivity Sensing through Single-Cell Raman Spectroscopy
Cited by: 7
Author(s): Jingkai Wang, Kaicheng Lin, Huijie Hu, Xingwang Qie, Wei E. Huang, Zhisong Cui, Yan Gong, Yizhi Song
Software Mentions: 1
Published: over 3 years ago

10.3389/fcvm.2021.697737

Aortography Keypoint Tracking for Transcatheter Aortic Valve Implantation Based on Multi-Task Learning
Cited by: 3
Author(s): Viacheslav V. Danilov, K. Yu. Klyshnikov, Olga Gerget, Igor P. Skirnevsky, Anton G. Kutikhin, А. А. Шилов, Vladimir Ganyukov, Е. А. Овчаренко
Software Mentions: 1
Published: over 3 years ago

10.7554/eLife.65420

A common 1.6 mb Y-chromosomal inversion predisposes to subsequent deletions and severe spermatogenic failure in humans
Cited by: 14
Author(s): Pille Hallast, Laura Kibena, Margus Punab, Elena Arciero, Siiri Rootsi, Marina Grigorova, Rodrigo Flores, Mark A. Jobling, Olev Poolamets, Kristjan Pomm, Paul Korrovits, Kristiina Rull, Yali Xue, Chris Tyler‐Smith, Maris Laan
Software Mentions: 1
Published: over 3 years ago

10.1016/j.dib.2019.105104

Dataset of plant composition change over seven years at the Zumwalt Prairie Preserve, Oregon, USA
Cited by: 0
Author(s): Joshua P. Averett, Lesley R. Morris, Bryan A. Endress
Software Mentions: 1
Published: over 4 years ago

10.1002/ece3.2399

Heterotrophy mitigates the response of the temperate coral <i>Oculina arbuscula</i> to temperature stress
Cited by: 25
Author(s): Hannah E. Aichelman, Joseph E. Townsend, Travis A. Courtney, Justin H. Baumann, Sarah W. Davies, Karl D. Castillo
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pntd.0007874

Immune responses to O-specific polysaccharide (OSP) in North American adults infected with Vibrio cholerae O1 Inaba
Cited by: 11
Author(s): Md. Imam Hossain, Kamrul Islam, Meagan Kelly, Leslie M. Smith, Richelle C. Charles, Ana A. Weil, Taufiqur Rahman Bhuiyan, Pavol Kòváč, Peng Xu, Stephen B. Calderwood, Jakub K. Simon, Wilbur H. Chen, Michael Lock, Caroline E. Lyon, Beth D. Kirkpatrick, Mitchell B. Cohen, Myron M. Levine, Marc Gurwith, Daniel T. Leung, Andrew S. Azman, Jason B. Harris, Firdausi Qadri, Edward T. Ryan
Software Mentions: 1
Published: about 5 years ago

10.1186/s40880-017-0225-4

Exploring the potential confounder of nitrogen fertilizers in the relationship between pesticide exposures and risk of leukemia: a Poisson regression with two-way fixed-effects analysis
Cited by: 2
Author(s): Keith Fluegge, Keith Fluegge
Software Mentions: 1
Published: over 7 years ago

10.2196/jmir.6371

Self-Monitoring Utilization Patterns Among Individuals in an Incentivized Program for Healthy Behaviors
Cited by: 32
Author(s): Ju Young Kim, Nathan E. Wineinger, Michael Taitel, Jennifer M Radin, Osayi E Akinbosoye, Jenny Jiang, Nima Nikzad, Gregory Orr, Eric J. Topol, Steven R. Steinhubl
Software Mentions: 1
Published: about 8 years ago

10.2196/25409

Why #WeAreNotWaiting—Motivations and Self-Reported Outcomes Among Users of Open-source Automated Insulin Delivery Systems: Multinational Survey
Cited by: 33
Author(s): Katarina Braune, Katarzyna Anna Gajewska, Axel Thieffry, Dana Lewis, Timothée Froment, Shane O’Donnell, Jane Speight, Christel Hendrieckx, Jasmine Schipp, Timothy Skinner, Henriette Langstrup, Adrian Tappe, Klemens Raile, Bryan Cleal
Software Mentions: 1
Published: over 3 years ago

10.1186/s12864-019-6248-2

Promising prospects of nanopore sequencing for algal hologenomics and structural variation discovery
Cited by: 11
Author(s): Thomas Sauvage, William E. Schmidt, Hwan Su Yoon, Valerie J. Paul, Suzanne Fredericq
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pntd.0006627

Systematic literature review of Rift Valley fever virus seroprevalence in livestock, wildlife and humans in Africa from 1968 to 2016
Cited by: 60
Author(s): M. L. Clark, George M. Warimwe, Antonello Di Nardo, Nicholas A. Lyons, Simon Gubbins
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pntd.0006130

A comparative analysis of preservation techniques for the optimal molecular detection of hookworm DNA in a human fecal specimen
Cited by: 37
Author(s): Marina Papaiakovou, Nils Pilotte, Benjamin S. Baumer, Jessica R. Grant, Kristjana Ásbjörnsdóttir, Fabian Schaer, Yan Hu, Raffi V. Aroian, Judd L. Walson, Steven A. Williams
Software Mentions: 1
Published: almost 7 years ago

10.3389/fcvm.2021.650278

Metabolism and Chronic Inflammation: The Links Between Chronic Heart Failure and Comorbidities
Cited by: 23
Author(s): Zhiwei Li, Hongmei Zhao, Jing Wang
Software Mentions: 1
Published: over 3 years ago

10.7554/eLife.62668

Virtual conferences raise standards for accessibility and interactions
Cited by: 79
Author(s): Sarvenaz Sarabipour
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pntd.0007753

Loss of pyrethroid resistance in newly established laboratory colonies of Aedes aegypti
Cited by: 12
Author(s): Farah Z. Vera-Maloof, Karla Saavedra-Rodríguez, Rosa Patricia Penilla-Navarro, Américo David Rodríguez-Ramírez, Felipe Dzul, Pablo Manrique-Saide, William C. Black
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pntd.0008605

In target areas where human mosquito-borne diseases are diagnosed, the inclusion of the pre-adult mosquito aquatic niches parameters will improve the integrated mosquito control program
Cited by: 2
Author(s): Swapan Kumar Ghosh, Dipanjan Podder, Atanu Kumar Panja, Sabyasachi Mukherjee
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pntd.0006981

Human antibody reaction against recombinant salivary proteins of Phlebotomus orientalis in Eastern Africa
Cited by: 9
Author(s): Petra Sumová, Michal Šíma, Tatiana Spitzová, Maha E. Osman, Anderson B. Guimarães-Costa, Fabiano Oliveira, Dia-Eldin A. Elnaiem, Asrat Hailu, Alon Warburg, Jesús G. Valenzuela, Petr Volf
Software Mentions: 1
Published: almost 6 years ago

10.1038/ismej.2017.88

Nitrogen cost minimization is promoted by structural changes in the transcriptome of N-deprived Prochlorococcus cells
Cited by: 25
Author(s): Robert W. Read, Paul M. Berube, Steven J. Biller, Iva Neveux, Andrés Cubillos-Ruiz, Sallie W. Chisholm, Joseph J. Grzymski
Software Mentions: 1
Published: over 7 years ago

10.3389/fcell.2021.660069

Zebrafish Cancer Predisposition Models
Cited by: 11
Author(s): Kim Kobar, Keon Collett, Sergey V. Prykhozhij, Jason N. Berman
Software Mentions: 1
Published: over 3 years ago

10.1042/BSR20204421

Traditional Chinese medicine Bu-Shen-Jian-Pi-Fang attenuates glycolysis and immune escape in clear cell renal cell carcinoma: results based on network pharmacology
Cited by: 11
Author(s): Jinzhou Zheng, Wenhao Xu, Wangrui Liu, Haijia Tang, Jin-Gen Lu, Kyeong-Nam Yu, Xianrang Song, Feng Li, Yu Wang, Rui Wang, Lili Chen, Ye Zhang, Yunhua Qiu, Gaomeng Wei, Xiqiu Zhou, Jianfeng Yang
Software Mentions: 1
Published: over 3 years ago

10.18632/aging.103884

Global variability of the human IgG glycome
Cited by: 35
Author(s): Jerko Štambuk, Natali Nakić, Frano Vučković, Maja Pučić‐Baković, Genadij Razdorov, Irena Trbojević‐Akmačić, Mislav Novokmet, Toma Keser, Marija Vilaj, Tamara Štambuk, Ivan Gudelj, Mirna Šimurina, Manshu Song, Hao Wang, Marijana Peričić Salihović, Harry Campbell, Igor Rudan, Ivana Kolčić, Leigh Anne Eller, Paul McKeigue, Merlin L. Robb, Jonas Halfvarson, Metin Kurtoğlu, Vito Annese, Tatjana Škarić‐Jurić, Mariam Molokhia, Ozren Polašek, Caroline Hayward, Hannah Kibuuka, Kujtim Thaqi, Dragan Primorac, Christian Gieger, Sorachai Nitayaphan, Tim D. Spector, Youxin Wang, Therese Tillin, Nish Chaturvedi, James F. Wilson, Moses S. Schanfield, М. Л. Филипенко, Wei Wang, Gordan Lauc
Software Mentions: 1
Published: over 4 years ago

10.1016/j.dib.2018.11.115

A proteomic profiling dataset of recombinant Chinese hamster ovary cells showing enhanced cellular growth following miR-378 depletion
Cited by: 4
Author(s): Orla Coleman, Alan Costello, Michael Henry, Nga T. Lao, Niall Barron, Martin Clynes
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pntd.0007818

High-throughput genotyping of a full voltage-gated sodium channel gene via genomic DNA using target capture sequencing and analytical pipeline MoNaS to discover novel insecticide resistance mutations
Cited by: 15
Author(s): Kentaro Itokawa, Tsuyoshi Sekizuka, Yoshihide Maekawa, Koji Yatsu, Osamu Komagata, Masaaki Sugiura, Takehiro Sasaki, Takashi Tomita, Makoto Kuroda, Kyoko Sawabe, Shinji Kasai
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pmed.1002514

The epidemiology of adolescents living with perinatally acquired HIV: A cross-region global cohort analysis
Cited by: 91
Author(s): Amy L. Slogrove, Michael Schomaker, Mary‐Ann Davies, Paige Williams, Suna Balkan, Jihane Ben‐Farhat, Nancy R. Calles, Kulkanya Chokephaibulkit, Charlotte Duff, Tanoh François Eboua, Adeodata Kekitiinwa‐Rukyalekere, Nicola Maxwell, Jorge Pinto, George R. Seage, Chloe A. Teasdale, Sebastian Wanless, Josiane Warszawski, Kara Wools‐Kaloustian, Marcel Yotebieng, Venessa Timmerman, Intira Jeannie Collins, Ruth Goodall, Colette Smith, Kunjal Patel, Mary E. Paul, Diana Gibb, Rachel C. Vreeman, Elaine J. Abrams, Rohan Hazra, Russell Van Dyke, Linda‐Gail Bekker, Lynne Mofenson, Marissa Vicari, Shaffiq Essajee, Martina Penazzato, Gabriel Anabwani, Edith Q. Mohapi, Peter N. Kazembe, Makhosazana Hlatshwayo, Mwita Lumumba, Tessa Goetghebuer, Claire Thorne, Luisa Galli, Annemarie M. C. van Rossum, Carlo Giaquinto, Magdalena Marczyńska, Laura Marquès, Filipa Prata, Luminiţa Ene, Liubov Okhonskaia, Pablo Rojo, Clàudia Fortuny, Lars Navér, Christoph Rudin, Sophie Le Cœur, Alla Volokha, Vanessa Rouzier, Regina C.M. Succi, Annette H. Sohn, Azar Kariminia, Andrew Edmonds, Patricia Lelo, Samuel Ayaya, Patricia Ong'wen, Laura Jefferys, Sam Phiri, Mwangelwa Mubiana‐Mbewe, Shobna Sawry, Lorna Renner, Mariam Sylla, Mark J. Abzug, Myron J. Levin, James M. Oleske, Miriam Chernoff, Shirley Traite, Murli Purswani, Ellen G. Chadwick, Ali Judd, Valériane Leroy
Software Mentions: 1
Published: almost 7 years ago

10.3390/ani9100852

Effects of Partial Replacment of Dietary Forage Using Kelp Powder (Thallus laminariae) on Ruminal Fermentation and Lactation Performances of Dairy Cows
Cited by: 12
Author(s): Fuguang Xue, Fuyu Sun, Linshu Jiang, Dengke Hua, Yue Wang, Xuemei Nan, Yiguang Zhao, Benhai Xiong
Software Mentions: 1
Published: about 5 years ago

10.3390/nu13082688

Flavonoid-Modifying Capabilities of the Human Gut Microbiome—An In Silico Study
Cited by: 17
Author(s): Tobias Goris, Rafael R. C. Cuadrat, Annett Braune
Software Mentions: 1
Published: over 3 years ago

10.1042/BSR20193271

Impairment of cell adhesion and migration by inhibition of protein disulphide isomerases in three breast cancer cell lines
Cited by: 9
Author(s): Henry S Young, Lucy M McGowan, Katy A. Jepson, Josephine C. Adams
Software Mentions: 1
Published: about 4 years ago

10.3389/fcell.2020.616332

Genome-Scale CRISPR-Cas9 Transcriptional Activation Screening in Metformin Resistance Related Gene of Prostate Cancer
Cited by: 8
Author(s): Jiahong Chen, Yaqiang Huang, Zhenfeng Tang, Maozhang Li, Xuemei Ling, Jinxian Liao, Xiaobo Zhou, Shumin Fang, Haibo Zhao, Weide Zhong, Xia Yuan
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pgen.1005881

Liver-Enriched Gene 1, a Glycosylated Secretory Protein, Binds to FGFR and Mediates an Anti-stress Pathway to Protect Liver Development in Zebrafish
Cited by: 18
Author(s): Minjie Hu, Yun Bai, Chun Xia Zhang, Feng Liu, Zongbin Cui, Jun Chen, Jinrong Peng
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pgen.1002170

Genome-Wide Association Study Identifies HLA-DP as a Susceptibility Gene for Pediatric Asthma in Asian Populations
Cited by: 118
Author(s): Emiko Noguchi, Hiromi Sanada, Tomomitsu Hirota, Kaori Ochiai, Yoshimasa Imoto, Masafumi Sakashita, Fumitake Kurosaka, Akira Akasawa, Shigemi Yoshihara, Noriko Kanno, Yumi Yamada, Naoki Shimojo, Yoichi Kohno, Yôichi Suzuki, Mi Jin Kang, Ji Won Kwon, Soo Jong Hong, Ken Inoue, Yu Ichi Goto, Fumio Yamashita, Takashi Asada, Hiroshi Hara, Ikuo Saito, Shigeharu Fujieda, Nobuyuki Hizawa, Terufumi Sakamoto, Hironori Masuko, Yusuke Nakamura, Ichiro Nomura, Mayumi Tamari, Tadao Arinami, Teruhiko Yoshida, Hirohisa Saito, Kenji Matsumoto
Software Mentions: 1
Published: over 13 years ago

10.3389/fcell.2021.632183

Transcriptome and DNA Methylation Profiles of Mouse Fetus and Placenta Generated by Round Spermatid Injection
Cited by: 4
Author(s): Haibo Zhu, Hao Sun, Daren Yu, Tianda Li, Hai Tang, Chao Liu, Ying Zhang, Yurong Chen, Xiangpeng Dai, Ziyi Li, Wei Li, Ruizhi Liu, Guihai Feng, Qi Zhou
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pgen.1003495

High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates
Cited by: 239
Author(s): Gaurav Dugar, Alexander Herbig, Konrad U. Förstner, Nadja Heidrich, Richard Reinhardt, Kay Nieselt, Cynthia M. Sharma
Software Mentions: 1
Published: over 11 years ago

10.1038/s41396-018-0325-4

Nitric oxide production and antioxidant function during viral infection of the coccolithophore Emiliania huxleyi
Cited by: 19
Author(s): Brittany Schieler, Megha V. Soni, Christopher M. Brown, Marco J. L. Coolen, Helen F. Fredricks, Benjamin A. S. Van Mooy, Donald J. Hirsh, Kay D. Bidle
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pgen.1009420

A conserved role of the duplicated Masculinizer gene in sex determination of the Mediterranean flour moth, Ephestia kuehniella
Cited by: 12
Author(s): Sako Visser, Anna Voleníková, Petr Nguyen, Eveline C. Verhulst, František Marec
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pgen.1009001

Excess crossovers impede faithful meiotic chromosome segregation in C. elegans
Cited by: 19
Author(s): Jeremy Hollis, Marissa L. Glover, Aleesa J. Schlientz, Cori K. Cahoon, Bruce Bowerman, Sarah M. Wignall, Diana E. Libuda
Software Mentions: 1
Published: about 4 years ago

10.2196/15597

Analysis of Collective Human Intelligence for Diagnosis of Pigmented Skin Lesions Harnessed by Gamification Via a Web-Based Training Platform: Simulation Reader Study
Cited by: 11
Author(s): Claus Rinner, Harald Kittler, Cliff Rosendahl, Philipp Tschandl
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pgen.1007913

Dissecting the pathways coordinating patterning and growth by plant boundary domains
Cited by: 27
Author(s): Aude Maugarny-Calès, Millán Cortizo, Bernard Adroher, Néro Borrega, Beatriz Gonçalves, Géraldine Brunoud, Teva Vernoux, Nicolas Arnaud, Patrick Laufs
Software Mentions: 1
Published: almost 6 years ago

10.1007/s00259-021-05266-7

Equivalent tumor detection for early and late FAPI-46 PET acquisition
Cited by: 28
Author(s): Justin Ferdinandus, Lukas Kessler, Nader Hirmas, Marija Trajkovic‐Arsic, Rainer Hamacher, Lale Umutlu, Michael Nader, Fadi Zarrad, Manuel Weber, Wolfgang P. Fendler
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pgen.1007897

A specialized MreB-dependent cell wall biosynthetic complex mediates the formation of stalk-specific peptidoglycan in Caulobacter crescentus
Cited by: 29
Author(s): Maria Billini, Jacob Biboy, Juliane Kühn, Waldemar Vollmer, Martin Thanbichler
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcell.2020.601502

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer
Cited by: 5
Author(s): Hantao Wang, Junjie Xing, Wei Wang, Gui‐Fen Lv, Haiyan He, Yeqing Lu, Mei Sun, Haiyan Chen, Xu Li
Software Mentions: 1
Published: almost 4 years ago

10.3389/fcell.2020.618598

Secreted Phosphoprotein 1 Expression in Retinal Mononuclear Phagocytes Links Murine to Human Choroidal Neovascularization
Cited by: 20
Author(s): Anja Schlecht, Peipei Zhang, Julian Wolf, Adrian Thien, Dennis-Dominik Rosmus, Stefaniya Boneva, Günther Schlunck, Clemens Lange, Peter Wieghofer
Software Mentions: 1
Published: almost 4 years ago

10.1042/BSR20190482

High-throughput sequencing analysis of genes encoding the B-lymphocyte receptor heavy-chain CDR3 in renal and peripheral blood of IgA nephropathy
Cited by: 4
Author(s): Dapeng Chen, Zheng Zhang, Yue Yang, Quan Hong, Wenge Li, Zhuo Li
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pgen.1008920

Developmental loss of neurofibromin across distributed neuronal circuits drives excessive grooming in Drosophila
Cited by: 11
Author(s): Lanikea B. King, Tamara Boto, Valentina Botero, Ari Aviles, Breanna M. Jomsky, Chevara Joseph, James A. Walker, Seth M. Tomchik
Software Mentions: 1
Published: over 4 years ago

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