cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1186/1475-2859-12-72

Metabolic engineering of Bacillus subtilis for growth on overflow metabolites
Cited by: 37
Author(s): Johannes Kabisch, Isabel Pratzka, Hanna Meyer, Dirk Albrecht, Michael Lalk, Armin Ehrenreich, Thomas Schweder
Software Mentions: 1
Published: about 13 years ago

10.1128/mSphere.00213-17

Gene Acquisition by a Distinct Phyletic Group within Streptococcus pneumoniae Promotes Adhesion to the Ocular Epithelium
Cited by: 8
Author(s): Irena Antic, Maureen Stolzer, Han Lai, Evan Powell, Rory Eutsey, Rolando Cuevas, Xinyu Miao, Regis P. Kowalski, Robert M. Q. Shanks, Dannie Durand, N. Luisa Hiller
Software Mentions: 1
Published: almost 9 years ago

10.3389/fonc.2021.671047

Association of the 12-Gene Breast DCIS Score® Assay With Local Recurrence in Patients With Ductal Carcinoma In Situ Treated on Accelerated Partial Breast Radiotherapy Protocols
Cited by: 0
Author(s): Charles E. Leonard, Shannon Tole, Michelle Turner, John P. Bennett, Kathryn Howell, Dennis L. Carter
Software Mentions: 1
Published: about 5 years ago

10.1186/s12934-021-01589-0

Evaluation of fecal microbiota transplantation in Parkinson's disease patients with constipation
Cited by: 62
Author(s): Xiaoyi Kuai, Xiaohan Yao, Lijuan Xu, Yuqing Zhou, Liping Zhang, Yi Liu, Shaofang Pei, Chunli Zhou
Software Mentions: 1
Published: over 5 years ago

10.3390/jpm11060549

Comparison of Postoperative Coronal Leg Alignment in Customized Individually Made and Conventional Total Knee Arthroplasty
Cited by: 2
Author(s): Felix Wunderlich, Maheen Azad, Ruben Westphal, Thomas Klonschinski, Patrick Belikan, Philipp Drees, Lukas Eckhard
Software Mentions: 1
Published: about 5 years ago

10.1093/jac/dkv400

Clinical implications of reduced susceptibility to fluoroquinolones in paediatricShigella sonneiandShigella flexneriinfections
Cited by: 11
Author(s): Corinne N. Thompson, Nga Tran Vu Thieu, Phat Voong Vinh, Anh Nguyen Duc, Marcel Wolbers, Ha Vinh, James I. Campbell, Dung Tran Thi Ngoc, Nguyễn Văn Minh Hoàng, Tuyen Ha Thanh, To Nguyen Thi Nguyen, Nguyen Phu Huong Lan, Christopher M. Parry, Nguyễn Văn Vĩnh Châu, Guy Thwaites, Duy Pham Thanh, Stephen Baker
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2020.539540

Analyses of the Bacterial Contamination on Belgian Broiler Carcasses at Retail Level
Cited by: 8
Author(s): Yining Zhu, Marie Joossens, Kurt Houf
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms22062824

Refining Genotypes and Phenotypes in KCNA2-Related Neurological Disorders
Cited by: 15
Author(s): Jan Henje Döring, Julian Schröter, Jerome Jüngling, Saskia Biskup, Kerstin Alexandra Klotz, Thomas Bast, T. Dietel, Georg Christoph Korenke, Sophie Christoph, Heiko Brennenstuhl, Guido Rubboli, Rikke S. Møller, Gaëtan Lesca, Yves Chaix, Stefan Kölker, Georg F. Hoffmann, Johannes R. Lemke, Steffen Syrbe
Software Mentions: 1
Published: over 5 years ago

10.1128/mSphereDirect.00027-19

Antibody Biomarkers Associated with Sterile Protection Induced by Controlled Human Malaria Infection under Chloroquine Prophylaxis
Cited by: 24
Author(s): Joshua M. Obiero, Joseph J. Campo, Anja Scholzen, Arlo Randall, Else M. Bijker, Meta Roestenberg, Cornelus C. Hermsen, Andy Teng, Aarti Jain, D. Huw Davies, Robert W. Sauerwein, Philip L. Felgner
Software Mentions: 1
Published: over 7 years ago

10.1111/1365-2656.12953

A multi‐faceted approach testing the effects of previous bacterial exposure on resistance and tolerance
Cited by: 12
Author(s): Megan A. M. Kutzer, Joachim Kurtz, Sophie A. O. Armitage
Software Mentions: 1
Published: over 7 years ago

10.1155/2020/9602942

Temporal Trends in X-Ray Exposure during Coronary Angiography and Percutaneous Coronary Intervention
Cited by: 6
Author(s): Cedric Davidsen, Kirsten Bolstad, Ellisif Nygaard, Kjell Vikenes, Svein Rotevatn, Vegard Tuseth
Software Mentions: 1
Published: almost 6 years ago

10.1111/eva.12430

Sockeye salmon repatriation leads to population re‐establishment and rapid introgression with native kokanee
Cited by: 22
Author(s): Andrew J. Veale, Michael A. Russello
Software Mentions: 1
Published: almost 10 years ago

10.1128/mSphere.00506-19

Recovirus NS1-2 Has Viroporin Activity That Induces Aberrant Cellular Calcium Signaling To Facilitate Virus Replication
Cited by: 16
Author(s): Alicia C. Strtak, Jacob L. Perry, Mark N. Sharp, Alexandra L. Chang‐Graham, Tibor Farkas, Joseph M. Hyser
Software Mentions: 1
Published: almost 7 years ago

10.1007/s10928-019-09632-9

Development of visual predictive checks accounting for multimodal parameter distributions in mixture models
Cited by: 7
Author(s): Usman Arshad, Estelle Chasseloup, Rikard Nordgren, Mats O. Karlsson
Software Mentions: 1
Published: over 7 years ago

10.1128/mSphere.00334-19

Validating DNA Extraction Protocols for Bentonite Clay
Cited by: 11
Author(s): Katja Engel, Sara Coyotzi, Melody A. Vachon, Jennifer McKelvie, Josh D. Neufeld
Software Mentions: 1
Published: almost 7 years ago

10.1128/mSphere.00601-19

Stability of Microbial Community Profiles Associated with Compacted Bentonite from the Grimsel Underground Research Laboratory
Cited by: 8
Author(s): Katja Engel, Sian E. Ford, Sara Coyotzi, Jennifer McKelvie, Nikitas Diomidis, G. F. Slater, Josh D. Neufeld
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0155046

A European Mitochondrial Haplotype Identified in Ancient Phoenician Remains from Carthage, North Africa
Cited by: 23
Author(s): Elizabeth Matisoo-Smith, Anna L. Gosling, James Boocock, Olga Kardailsky, Yara Kurumilian, Sihem Roudesli‐Chebbi, Leila Badre, Jean-Paul Morel, Leïla Ladjimi Sebaï, Pierre Zalloua
Software Mentions: 1
Published: about 10 years ago

10.15252/embj.2019102140

Plant photoreceptors and their signaling components compete for <scp>COP</scp> 1 binding via VP peptide motifs
Cited by: 94
Author(s): Kelvin Lau, Roman Podolec, Richard Chappuis, Roman Ulm, Michael Hothorn
Software Mentions: 1
Published: about 7 years ago

10.1002/ece3.4461

Are Ponto-Caspian species able to cross salinity barriers? A case study of the gammaridPontogammarus maeoticus
Cited by: 8
Author(s): Nora‐Charlotte Pauli, Filipa Paiva, Elizabeta Briski
Software Mentions: 1
Published: almost 8 years ago

10.1007/s10928-017-9550-0

Model selection and averaging of nonlinear mixed-effect models for robust phase III dose selection
Cited by: 26
Author(s): Yasunori Aoki, Daniel Röshammar, Bengt Hamrén, Andrew C. Hooker
Software Mentions: 1
Published: almost 9 years ago

10.1111/joa.13091

Human biological variation in sesamoid bone prevalence: the curious case of the fabella
Cited by: 26
Author(s): Michael A. Berthaume, Anthony M.J. Bull
Software Mentions: 1
Published: almost 7 years ago

10.3390/cells10081910

Two Sides to Every Question: Attempts to Activate Chicken Innate Immunity in 2D and 3D Hepatic Cell Cultures
Cited by: 5
Author(s): Csilla Sebők, Patrik Tráj, Júlia Vörösházi, Máté Mackei, Márton Papp, P. Gálfi, Zsuzsanna Neogrády, Gábor Mátis
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0202756

Comparisons between context-specific and beverage-specific quantity frequency instruments to assess alcohol consumption indices: Individual and sample level analysis
Cited by: 4
Author(s): Polathep Vichitkunakorn, Karnsunaphat Balthip, Alan Geater, Sawitri Assanangkornchai
Software Mentions: 1
Published: about 8 years ago

10.1016/j.jacc.2018.09.073

His Resynchronization Versus Biventricular Pacing in Patients With Heart Failure and Left Bundle Branch Block
Cited by: 167
Author(s): Ahran Arnold, Matthew Shun-Shin, Daniel Keene, James P. Howard, S.M. Afzal Sohaib, Ian Wright, Graham D. Cole, Norman Qureshi, David Lefroy, Michael Koa‐Wing, Nick Linton, Phang Boon Lim, Nicholas S. Peters, D. Wyn Davies, Amal Muthumala, Mark Tanner, Kenneth A. Ellenbogen, Prapa Kanagaratnam, Dárrel P. Francis, Zachary I. Whinnett
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.01767

Differential Localization of Chemotactic Signaling Arrays during the Lifecycle of Vibrio parahaemolyticus
Cited by: 14
Author(s): Jan Heering, Simon Ringgaard
Software Mentions: 1
Published: almost 10 years ago

10.1016/j.mex.2020.100977

Optimizing pollencounter for high throughput phenotyping of pollen quality in tomatoes
Cited by: 4
Author(s): Mathieu Anatole Tele Ayenan, Agyemang Danquah, Charles Ampomah‐Dwamena, Peter Hanson, Isaac Asante, Eric Danquah
Software Mentions: 1
Published: over 6 years ago

10.1128/mSphere.00090-20

Restricted Sequence Variation in Streptococcus pyogenes Penicillin Binding Proteins
Cited by: 16
Author(s): Andrew Hayes, Jake A. Lacey, Jacqueline M Morris, Mark R. Davies, Steven Y. C. Tong
Software Mentions: 1
Published: over 6 years ago

10.3233/JAD-190132

Low Serum High-Density Lipoprotein Cholesterol Levels Associate with the C9orf72 Repeat Expansion in Frontotemporal Lobar Degeneration Patients
Cited by: 13
Author(s): Olli Jääskeläinen, Eino Solje, Anette Hall, Kasper Katisko, Ville Korhonen, Mika Tiainen, Antti J. Kangas, Seppo Helisalmi, Maria Pikkarainen, Anne M. Koivisto, Päivi Hartikainen, Mikko Hiltunen, Mika Ala‐Korpela, Hilkka Soininen, Pasi Soininen, Annakaisa Haapasalo, Anne M. Remes, Sanna‐Kaisa Herukka
Software Mentions: 1
Published: almost 7 years ago

10.1021/acs.jafc.0c06279

Xylooligosaccharides Increase Bifidobacteria and Lachnospiraceae in Mice on a High-Fat Diet, with a Concomitant Increase in Short-Chain Fatty Acids, Especially Butyric Acid
Cited by: 40
Author(s): Karin Berger, Stephen Burleigh, Maria Lindahl, Abhishek Bhattacharya, Prachiti Patil, Henrik Stålbrand, Eva Nordberg Karlsson, Frida Fåk Hållenius, Margareta Nyman, Patrick Adlercreutz
Software Mentions: 1
Published: over 5 years ago

10.1172/jci.insight.147474

The effect of low-dose IL-2 and Treg adoptive cell therapy in patients with type 1 diabetes
Cited by: 76
Author(s): Shen Dong, Kamir J Hiam-Galvez, Cody T. Mowery, Kevan C. Herold, Stephen E. Gitelman, Jonathan H. Esensten, Weihong Liu, Angela Lares, Ashley S. Leinbach, Michael Lee, Vinh Nguyen, Stanley Tamaki, Whitney Tamaki, Courtney M. Tamaki, Morvarid Mehdizadeh, Amy Putnam, Matthew H. Spitzer, Chun Jimmie Ye, Qizhi Tang, Jeffrey A. Bluestone
Software Mentions: 1
Published: almost 5 years ago

10.3390/cells10092400

Tissue of Origin, but Not XCI State, Influences Germ Cell Differentiation from Human Pluripotent Stem Cells
Cited by: 5
Author(s): Yolanda W. Chang, Arend W. Overeem, Celine M. Roelse, Xueying Fan, Christian Freund, Susana M. Chuva de Sousa Lopes
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0203048

1H-NMR and MALDI-TOF MS as metabolomic quality control tests to classify platelet derived medium additives for GMP compliant cell expansion procedures
Cited by: 2
Author(s): Francesco Agostini, Marta Ruzza, Davide Corpillo, Luca Biondi, Elena Acquadro, Barbara Canepa, Alessandra Viale, Monica Battiston, Fabrizio Serra, Silvio Aime, M. Mazzucato
Software Mentions: 1
Published: almost 8 years ago

10.1016/j.mex.2019.12.004

MITAS: A model for assessing the time-dependent risk of sequential applications of pesticides for soil organisms by consideration of exposure, degradation and mixture toxicity
Cited by: 1
Author(s): Alexandra Sybertz, Martina Roß-Nickoll, Andreas Schäffer, Björn Scholz-Starke, Benjamin Daniels, Andreas Schäffer
Software Mentions: 1
Published: over 6 years ago

10.3390/mps4030050

A Multistep Workflow to Evaluate Newly Generated iPSCs and Their Ability to Generate Different Cell Types
Cited by: 29
Author(s): Carol X.-Q. Chen, Narges Abdian, Gilles Maussion, Rhalena A. Thomas, Iveta Demirova, Eddie Cai, Mahdieh Tabatabaei, Lenore K. Beitel, Jason Karamchandani, Edward A. Fon, Thomas M. Durcan
Software Mentions: 1
Published: about 5 years ago

10.3390/mps2030062

Robust Normalization of Luciferase Reporter Data
Cited by: 5
Author(s): Andrea Repele, Manu Manu
Software Mentions: 1
Published: about 7 years ago

10.1002/ece3.3316

Behavior and season affect crayfish detection and density inference using environmental <scp>DNA</scp>
Cited by: 57
Author(s): Nicholas Dunn, Victoria Priestley, Alba Herraiz, Richard Arnold, Vincent Savolainen
Software Mentions: 1
Published: almost 9 years ago

10.1007/s11306-018-1388-y

Metabolomics reveals immunomodulation as a possible mechanism for the antibiotic effect of Persicaria capitata (Buch.-Ham. ex D. Don) H.Gross
Cited by: 6
Author(s): Pei Han, Yong Huang, Yumin Xie, Weichun Yang, Xiang Wenying, Peter J. Hylands, Cristina Legido‐Quigley
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0197760

Multiple recombination events between two cytochrome P450 loci contribute to global pyrethroid resistance in Helicoverpa armigera
Cited by: 49
Author(s): Tom Walsh, Nicole Joußen, Kai Tian, Angela McGaughran, C. A. Anderson, Xinghui Qiu, Seung‐Joon Ahn, Lisa J. Bird, Nena Pavlidi, John Vontas, Jaeeun Ryu, Akhtar Rasool, Isabella Barony Macedo, Wee Tek Tay, Yongjun Zhang, Mary Whitehouse, Pierre Silvie, Sharon Downes, Lori Nemec, David G. Heckel
Software Mentions: 1
Published: almost 8 years ago

10.1194/jlr.M092486

Comparative quantitative systems pharmacology modeling of anti-PCSK9 therapeutic modalities in hypercholesterolemia
Cited by: 17
Author(s): В. В. Соколов, Gabriel Helmlinger, Carin Nilsson, Kirill Zhudenkov, Stanko Skrtic, Bengt Hamrén, Kirill Peskov, Eva Hurt-Camejo, Rasmus Jansson‐Löfmark
Software Mentions: 1
Published: almost 7 years ago

10.1128/mSphere.01245-20

DeORFanizing Candida albicans Genes using Coexpression
Cited by: 11
Author(s): Teresa R. O’Meara, Matthew J. O’Meara
Software Mentions: 1
Published: over 5 years ago

10.1111/eva.12804

Natural Wolbachia infections are common in the major malaria vectors in Central Africa
Cited by: 38
Author(s): Diégo Ayala, Ousman Akone‐Ella, Nil Rahola, Pierre Kengne, Marc F. Ngangue, Fabrice Mezeme, Boris Makanga, Martha Nigg, Carlo Costantini, Frédéric Simard, Franck Prugnolle, Benjamín Roche, Olivier Duron, Christophe Paupy
Software Mentions: 1
Published: about 7 years ago

10.3762/bjoc.14.284

Repurposing the anticancer drug cisplatin with the aim of developing novel Pseudomonas aeruginosa infection control agents
Cited by: 22
Author(s): Mingjun Yuan, Song Lin Chua, Yang Liu, Daniela I. Drautz–Moses, Joey Kuok Hoong Yam, Thet Tun Aung, Roger W. Beuerman, May Margarette Santillan Salido, Stephan C. Schuster, Choon‐Hong Tan, Michael Givskov, Liang Yang, Thomas E. Nielsen
Software Mentions: 1
Published: over 7 years ago

10.1128/mSphere.00290-21

Lsr2 and Its Novel Paralogue Mediate the Adjustment of Mycobacterium smegmatis to Unfavorable Environmental Conditions
Cited by: 7
Author(s): Marta Kołodziej, Tomasz Łebkowski, Przemysław Płociński, Joanna Hołówka, Mariola Paściak, Bartosz Wojtaś, Katarzyna Bury, Igor Konieczny, Jarosław Dziadek, Jolanta Zakrzewska‐Czerwińska
Software Mentions: 1
Published: about 5 years ago

10.1007/s11306-016-1104-8

Removing the bottlenecks of cell culture metabolomics: fast normalization procedure, correlation of metabolites to cell number, and impact of the cell harvesting method
Cited by: 55
Author(s): Caroline Muschet, Gabriele Möller, Cornelia Prehn, Martin Hrabé de Angelis, Jerzy Adamski, Janina Tokarz
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijms21165784

Predicting the Development of Anti-Drug Antibodies against Recombinant alpha-Galactosidase A in Male Patients with Classical Fabry Disease
Cited by: 7
Author(s): Sanne J. van der Veen, Wytze J. Vlietstra, Laura van Dussen, André B. P. Kuilenburg, Marcel G. W. Dijkgraaf, Malte Lenders, Eva Brand, Christoph Wanner, Derralynn Hughes, Perry Elliott, Carla E. M. Hollak, Mirjam Langeveld
Software Mentions: 1
Published: about 6 years ago

10.1128/mSphere.01208-20

Case Study of the Response of N 6 -Methyladenine DNA Modification to Environmental Stressors in the Unicellular Eukaryote Tetrahymena thermophila
Cited by: 11
Author(s): Yalan Sheng, Bo Pan, Wei Fan, Yuanyuan Wang, Shan Gao
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.00611

Signal Disruption Leads to Changes in Bacterial Community Population
Cited by: 20
Author(s): Michael Schwab, Céline Bergonzi, Jonathan K. Sakkos, Christopher Staley, Qian Zhang, Michael J. Sadowsky, Mikael Elias
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0195510

Emergence of highly prevalent CA-MRSA ST93 as an occupational risk in people working on a pig farm in Australia
Cited by: 13
Author(s): Shafi Sahibzada, Marta Hernández‐Jover, David Jordan, Peter Thomson, Jane Heller
Software Mentions: 1
Published: over 8 years ago

10.1007/s11306-021-01806-2

Differential insulin sensitivity of NMR-based metabolomic measures in a two-step hyperinsulinemic euglycemic clamp study
Cited by: 0
Author(s): Wenyi Wang, Ko Willems van Dijk, Carolien A. Wijsman, Maarten P. Rozing, Simon P. Mooijaart, Marian Beekman, P. Eline Slagboom, J. Wouter Jukema, Raymond Noordam, Diana van Heemst
Software Mentions: 1
Published: about 5 years ago

10.3762/bjoc.16.248

Secondary metabolites of Bacillus subtilis impact the assembly of soil-derived semisynthetic bacterial communities
Cited by: 15
Author(s): Heiko T. Kiesewalter, Carlos N. Lozano-Andrade, Mikael Lenz Strube, Ákos T. Kovács
Software Mentions: 1
Published: over 5 years ago

10.1242/dmm.032383

A novel zebrafish intestinal tumor model reveals a role for cyp7a1-dependent tumor-liver crosstalk in tumor's adverse effects on host
Cited by: 25
Author(s): Sora Enya, Koichi Kawakami, Yutaka Suzuki, Shinpei Kawaoka
Software Mentions: 1
Published: over 8 years ago

10.1128/mSystems.00128-16

Integrated Role of Bifidobacterium animalis subsp. lactis Supplementation in Gut Microbiota, Immunity, and Metabolism of Infant Rhesus Monkeys
Cited by: 19
Author(s): Xuan He, Carolyn M. Slupsky, James Dekker, Neill W. Haggarty, Bo Lönnerdal
Software Mentions: 1
Published: over 9 years ago

10.1007/s11306-020-01740-9

Glycerophospholipid and detoxification pathways associated with small for gestation age pathophysiology: discovery metabolomics analysis in the SCOPE cohort
Cited by: 6
Author(s): Aude-Claire Morillon, Débora Farias Batista Leite, Shirish Yakkundi, Lee A. Gethings, Grace Thomas, Philip N. Baker, Louise C. Kenny, James English, Fergus P. McCarthy
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.00839

Population Genomic Analysis Reveals a Highly Conserved Mitochondrial Genome in Fusarium asiaticum
Cited by: 13
Author(s): Meixin Yang, Hao Zhang, Theo A. J. van der Lee, C. Waalwijk, Anne D. van Diepeningen, Feng Jing, Balázs Brankovics, Wanquan Chen
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0252580

Genetically modified food and consumer risk responsibility: The effect of regulatory design and risk type on cognitive information processing
Cited by: 2
Author(s): Ashkan Pakseresht, Anna Kristina Edenbrandt, Carl Johan Lagerkvist
Software Mentions: 1
Published: about 5 years ago

10.3389/fonc.2021.674731

Lung Function After Stereotactic Body Radiation Therapy for Early-Stage Non-Small Cell Lung Cancer, Changes and Predictive Markers
Cited by: 7
Author(s): Janna Berg, Christina Ramberg, Jon Olav Sulheim Haugstvedt, May‐Bente Bengtson, Anne-Marie Gabrielsen, Odd Terje Brustugun, Ann Rita Halvorsen, Åslaug Helland
Software Mentions: 1
Published: about 5 years ago

10.1007/s11306-019-1484-7

Metabolomic and lipidomic assessment of the metabolic syndrome in Dutch middle-aged individuals reveals novel biological signatures separating health and disease
Cited by: 36
Author(s): Izabella Surowiec, Raymond Noordam, Kate Bennett, Marian Beekman, P. Eline Slagboom, Torbjörn Lundstedt, Diana van Heemst
Software Mentions: 1
Published: over 7 years ago

10.1016/j.eclinm.2020.100720

The effect of early treatment with ivermectin on viral load, symptoms and humoral response in patients with non-severe COVID-19: A pilot, double-blind, placebo-controlled, randomized clinical trial
Cited by: 143
Author(s): Carlos Chaccour, Aina Casellas, Andrés Blanco-Di Matteo, Iñigo Pineda, Alejandro Fernández-Montero, Paula Ruiz-Castillo, Mary-Ann Richardson, Mariano Rodríguez-Mateos, Carlota Jordán-Iborra, Joe Brew, Francisco Carmona-Torre, Miriam Giráldez, Ester Laso, Juan C. Gabaldón-Figueira, Carlota Dobaño, Gemma Moncunill, José Ramón Yuste, J.L. del Pozo, N. Regina Rabinovich, Verena Schöning, Felix Hammann, Gabriel Reina, Belén Sádaba, Mirian Fernández-Alonso
Software Mentions: 1
Published: over 5 years ago

10.1172/jci.insight.136533

Humoral immune responses mediate the development of a restrictive phenotype of chronic lung allograft dysfunction
Cited by: 13
Author(s): Keizo Misumi, David Wheeler, Yoshiro Aoki, M.P. Combs, Russell R. Braeuer, Ryuji Higashikubo, Wenjun Li, Daniel Kreisel, Ragini Vittal, Jeffrey L. Myers, Amir Lagstein, Neff Walker, Carol Farver, Vibha N. Lama
Software Mentions: 1
Published: over 5 years ago

10.1186/s13073-018-0542-5

Simple paired heavy- and light-chain antibody repertoire sequencing using endoplasmic reticulum microsomes
Cited by: 10
Author(s): Praneeth Reddy Devulapally, Jörg Bürger, Thorsten Mielke, Zoltán Konthur, Hans Lehrach, Marie–Laure Yaspo, Jörn Glökler, Hans-Jörg Warnatz
Software Mentions: 1
Published: over 8 years ago

10.1093/gbe/evaa270

Long-Read Genome Assemblies Reveal Extraordinary Variation in the Number and Structure of MHC Loci in Birds
Cited by: 37
Author(s): Ke He, Piotr Minias, Peter O. Dunn
Software Mentions: 1
Published: over 5 years ago

10.1093/gbe/evaa203

The Genetic Architecture of Emerging Fungicide Resistance in Populations of a Global Wheat Pathogen
Cited by: 23
Author(s): Daniel Pereira, Bruce A. McDonald, Daniel Croll
Software Mentions: 1
Published: almost 6 years ago

10.1111/eva.13133

Dispersal ability predicts spatial genetic structure in native mammals persisting across an urbanization gradient
Cited by: 14
Author(s): Jonathan L. Richardson, Sozos Michaelides, Matthew Combs, Mihajla Djan, Lianne Bisch, Kerry Barrett, Georgianna Silveira, Justin Butler, Than Thar Aye, Jason Munshi‐South, Michael DiMatteo, Charles H. Brown, Thomas J. McGreevy
Software Mentions: 1
Published: almost 6 years ago

10.1093/gbe/evaa064

piRNA Clusters Need a Minimum Size to Control Transposable Element Invasions
Cited by: 19
Author(s): Robert Kofler
Software Mentions: 1
Published: over 6 years ago

10.1093/gbe/evz221

Deciphering Ancestral Sex Chromosome Turnovers Based on Analysis of Male Mutation Bias
Cited by: 9
Author(s): Armando Acosta, Mónica Martínez-Pacheco, Karina Díaz-Barba, Niccole Porras, Mariana Gutiérrez-Mariscal, Diego Cortez
Software Mentions: 1
Published: almost 7 years ago

10.3389/fonc.2021.608641

Correlation Between Prognostic Biomarker SLC1A5 and Immune Infiltrates in Various Types of Cancers Including Hepatocellular Carcinoma
Cited by: 17
Author(s): Junsheng Zhao, Zhongli Yang, Mingmin Tu, Meng Wang, Hainv Gao, Ming D. Li, Lanjuan Li
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms22052246

Potential Neuroprotective Mechanisms of Methamphetamine Treatment in Traumatic Brain Injury Defined by Large-Scale IonStar-Based Quantitative Proteomics
Cited by: 3
Author(s): Shichen Shen, Ming Zhang, Min Ma, Sailee Rasam, David J. Poulsen, Jun Qu
Software Mentions: 1
Published: over 5 years ago

10.1002/ece3.3908

Usnic acid, as a biotic factor, changes the ploidy level in mosses
Cited by: 14
Author(s): Michal Goga, Dajana Ručová, Vladislav Kolarčik, Marko S. Sabovljević, Martin Bačkor, Ingeborg Lang
Software Mentions: 1
Published: over 8 years ago

10.1093/gbe/evy256

Insights into the Evolution of the New World Diploid Cottons (Gossypium, SubgenusHouzingenia) Based on Genome Sequencing
Cited by: 34
Author(s): Corrinne E. Grover, Mark A. Arick, Adam Thrash, Justin L. Conover, William S. Sanders, Daniel G. Peterson, James Frelichowski, Jodi A. Scheffler, Brian E. Scheffler, Jonathan F. Wendel
Software Mentions: 1
Published: over 7 years ago

10.3389/fonc.2019.00575

Impact of Taxanes, Endocrine Therapy, and Deleterious Germline BRCA Mutations on Anti-müllerian Hormone Levels in Early Breast Cancer Patients Treated With Anthracycline- and Cyclophosphamide-Based Chemotherapy
Cited by: 38
Author(s): Matteo Lambertini, Nathalie Olympios, Justine Lequesne, Céline Calbrix, Maxime Fontanilles, Agnès Loeb, Marianne Leheurteur, Isabelle Demeestere, Frédéric Di Fiore, A. Perdrix, Florian Clatot
Software Mentions: 1
Published: about 7 years ago

10.1093/gbe/evy255

Genome Reduction in the Mosquito SymbiontAsaia
Cited by: 16
Author(s): Diego Peres Alonso, Maria Vittoria Mancini, Claudia Damiani, Alessia Cappelli, Irene Ricci, Marcus Vinícius Niz Alvarez, Claudio Bandi, Paulo Eduardo Martins Ribolla, Guido Favia
Software Mentions: 1
Published: over 7 years ago

10.1007/s12311-020-01130-w

Investigation of Visual System Involvement in Spinocerebellar Ataxia Type 14
Cited by: 1
Author(s): Thomas Ihl, Ella Maria Kadas, Timm Oberwahrenbrock, Matthias Endres, Thomas Klockgether, Jan Schroeter, Alexander U. Brandt, Friedemann Paul, Martina Minnerop, Sarah Doss, Tanja Schmitz‐Hübsch, Hanna Zimmermann
Software Mentions: 1
Published: over 6 years ago

10.1016/j.cmet.2017.09.003

Citrobacter rodentium Subverts ATP Flux and Cholesterol Homeostasis in Intestinal Epithelial Cells In Vivo
Cited by: 59
Author(s): Cédric N. Berger, Valérie F. Crepin, Theodoros I. Roumeliotis, James C. Wright, Danielle Carson, Meirav Pevsner‐Fischer, R. Christopher D. Furniss, Gordon Dougan, Mally Dori-Bachash, Lu Yu, Abigail Clements, James W. Collins, Eran Elinav, Gérald Larrouy-Maumus, Jyoti S. Choudhary, Gad Frankel
Software Mentions: 1
Published: almost 9 years ago

10.1111/eva.13289

Larval development in the Pacific oyster and the impacts of ocean acidification: Differential genetic effects in wild and domesticated stocks
Cited by: 5
Author(s): Evan Durland, Pierre De Wit, Eli Meyer, Chris Langdon
Software Mentions: 1
Published: almost 5 years ago

10.1111/eva.13183

Heterogeneity of a dwarf phenotype in Dutch traditional chicken breeds revealed by genomic analyses
Cited by: 7
Author(s): Zhou Wu, Chiara Bortoluzzi, Martijn F.L. Derks, Langqing Liu, Mirte Bosse, S.J. Hiemstra, M.A.M. Groenen, R.P.M.A. Crooijmans
Software Mentions: 1
Published: over 5 years ago

10.1186/s11658-021-00261-0

β-elemene alleviates airway stenosis via the ILK/Akt pathway modulated by MIR143HG sponging miR-1275
Cited by: 6
Author(s): Guoying Zhang, Cheng Xue, Yiming Zeng
Software Mentions: 1
Published: about 5 years ago

10.1515/biol-2020-0077

In silico identification of Capsicum type III polyketide synthase genes and expression patterns in Capsicum annuum
Cited by: 2
Author(s): Delong Kan, Di Zhao, Pengfei Duan
Software Mentions: 1
Published: almost 6 years ago

10.1007/s10911-020-09461-4

Protocol: Adeno-Associated Virus-Mediated Gene Transfer in Ex Vivo Cultured Embryonic Mammary Gland
Cited by: 3
Author(s): Qiang Lan, Marja L. Mikkola
Software Mentions: 1
Published: almost 6 years ago

10.1002/ece3.3738

Feather mite abundance varies but symbiotic nature of mite‐host relationship does not differ between two ecologically dissimilar warblers
Cited by: 10
Author(s): Alix E. Matthews, Jeffery L. Larkin, Douglas W. Raybuck, Morgan C. Slevin, Scott H. Stoleson, Than J. Boves
Software Mentions: 1
Published: over 8 years ago

10.1002/ece3.5206

Interactions between ecological factors in the developmental environment modulate pupal and adult traits in a polyphagous fly
Cited by: 22
Author(s): Binh Nguyen, Fleur Ponton, Anh The Than, Phillip W. Taylor, Toni A. Chapman, Juliano Morimoto
Software Mentions: 1
Published: over 7 years ago

10.1093/gbe/evy224

Assessing genomic admixture between cryptic Plutella moth species following secondary contact
Cited by: 3
Author(s): Christopher Ward, Simon W. Baxter
Software Mentions: 1
Published: almost 8 years ago

10.3390/metabo11060382

Dried Blood Spot (DBS) Methodology Study for Biomarker Discovery in Lysosomal Storage Disease (LSD)
Cited by: 7
Author(s): Corina-Marcela Rus, Sebastiano Di Bucchianico, Claudia Cozma, Ralf Zimmermann, Péter Bauer
Software Mentions: 1
Published: about 5 years ago

10.1007/s00018-020-03597-6

The functional characteristics of optogenetic gene therapy for vision restoration
Cited by: 8
Author(s): Moritz Lindner, Michael James Gilhooley, Stuart N. Peirson, Steven Hughes, Mark W. Hankins
Software Mentions: 1
Published: about 6 years ago

10.1186/s13227-016-0040-z

Developmental basis of phenotypic integration in two Lake Malawi cichlids
Cited by: 31
Author(s): Pierre Le Pabic, W. James Cooper, Thomas F. Schilling
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0186499

Determinants of site of tuberculosis disease: An analysis of European surveillance data from 2003 to 2014
Cited by: 28
Author(s): Giovanni Sotgiu, Dennis Falzon, Vahur Hollo, Csaba Ködmön, Nicolas Lefèbvre, Andrei Dadu, Marieke van der Werf
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0256862

Pharmacokinetics of tulathromycin in pregnant ewes (Ovis aries) challenged with Campylobacter jejuni
Cited by: 5
Author(s): Michael J. Yaeger, Jonathan P. Mochel, Zhongliang Wu, Paul J. Plummer, Orhan Şahin, Joseph Wayne Smith, Melda Meral Öcal, Ashenafi Feyisa Beyi, Changyun Xu, Qijing Zhang, Ronald W. Griffith
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2017.01726

In Silico Screening of the Human Gut Metaproteome Identifies Th17-Promoting Peptides Encrypted in Proteins of Commensal Bacteria
Cited by: 18
Author(s): Claudio Hidalgo-Cantabrana, Marco Antonio Moro-García, Aitor Blanco-Míguez, Florentino Fdez-Riverola, Anália Lourenço, Rebeca Alonso-Arias, Borja Sánchez
Software Mentions: 1
Published: almost 9 years ago

10.3389/fonc.2021.626605

Transcriptome Analysis of Ivosidenib-Mediated Inhibitory Functions on Non-Small Cell Lung Cancer
Cited by: 1
Author(s): Juan Wu, Ru Chen, Huiqing Shen, Ting Yan, Yu Qian, Yaping Zhang, Zhuo-Ya Huang, Ping Kong, Min Pang, Xinri Zhang
Software Mentions: 1
Published: over 5 years ago

10.1080/19336950.2021.1965422

A pan-cancer analysis revealed the role of the SLC16 family in cancer
Cited by: 16
Author(s): Jun Li, Jiaheng Xie, Dan Wu, Liang Chen, Zixuan Gong, Rui Wu, Y. Hu, Jiangning Zhao, Yetao Xu
Software Mentions: 1
Published: over 5 years ago

10.1128/mSystems.00226-20

Tracking the Dairy Microbiota from Farm Bulk Tank to Skimmed Milk Powder
Cited by: 37
Author(s): Aoife J. McHugh, Conor Feehily, Mark A. Fenelon, David Gleeson, Colin Hill, Paul D. Cotter
Software Mentions: 1
Published: over 6 years ago

10.1136/bmjopen-2017-016866

Effect of weekend admission on process of care and clinical outcomes for the management of acute coronary syndromes: a retrospective analysis of three UK centres
Cited by: 13
Author(s): Glen P. Martin, Tim Kinnaird, Matthew Sperrin, Richard Anderson, Amr Gamal, Avais Jabbar, Chun Shing Kwok, Diane Barker, Grant Heatlie, Azfar Zaman, Mamas A. Mamas
Software Mentions: 1
Published: almost 9 years ago

10.1016/j.ophtha.2015.03.018

Increasing Prevalence of Myopia in Europe and the Impact of Education
Cited by: 316
Author(s): Katie Williams, Geir Bertelsen, Phillippa Cumberland, Christian Wolfram, Virginie J M Verhoeven, Eleftherios Anastasopoulos, Gabriëlle H.S. Buitendijk, Audrey Cougnard‐Grégoire, Catherine Creuzot‐Garcher, Maja Gran Erke, Ruth Hogg, René Höhn, Pirro G. Hysi, Anthony P. Khawaja, Jean‐François Korobelnik, Janina S. Ried, Johannes R. Vingerling, Alain M. Bron, Jean‐François Dartigues, Astrid Fletcher, Albert Hofman, Robert W A M Kuijpers, Robert Luben, Konrad Oxele, Fotis Topouzis, Therese von Hanno, Alireza Mirshahi, Paul J. Foster, Cornelia M. van Duijn, Norbert Pfeiffer, Cécile Delcourt, Caroline C.W. Klaver, Jugnoo S Rahi, Christopher J. Hammond
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0221689

Reference values for psychoacoustic tests on Polish school children 7–10 years old
Cited by: 5
Author(s): Elżbieta Włodarczyk, Agata Szkiełkowska, Henryk Skarżyńśki, Beata Miaśkiewicz, Henryk Skarżyńśki
Software Mentions: 1
Published: almost 7 years ago

10.3390/metabo10010023

Phytohormone and Transcriptomic Analysis Reveals Endogenous Cytokinins Affect Kiwifruit Growth under Restricted Carbon Supply
Cited by: 22
Author(s): Simona Nardozza, Janine M. Cooney, Helen Boldingh, Katrin G. Hewitt, Tania Trower, Dan Jones, Amali H. Thrimawithana, Andrew C. Allan, Annette Richardson
Software Mentions: 1
Published: over 6 years ago

10.1186/s13059-020-02079-z

The origins and genomic diversity of American Civil War Era smallpox vaccine strains
Cited by: 22
Author(s): Ana T. Duggan, Jennifer Klunk, Ashleigh F. Porter, Anna Dhody, R. D. Hicks, Geoffrey L. Smith, Margaret Humphreys, Andrea M. McCollum, Whitni Davidson, Kimberly Wilkins, Yu Liu, Amanda Burke, Hanna Polasky, Lowell Flanders, Debi Poinar, Amogelang R. Raphenya, Tammy T. Y. Lau, Brian Alcock, Andrew G McArthur, G. Brian Golding, Edward C. Holmes, Hendrik N. Poinar
Software Mentions: 1
Published: about 6 years ago

10.1155/2012/760281

Reconstruction of Exposure tom-Xylene from Human Biomonitoring Data Using PBPK Modelling, Bayesian Inference, and Markov Chain Monte Carlo Simulation
Cited by: 31
Author(s): Kevin McNally, Richard Cotton, John Cocker, Kate Jones, Mike Bartels, David L. Rick, Paul S. Price, George Loizou
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0148266

Simvastatin Sodium Salt and Fluvastatin Interact with Human Gap Junction Gamma-3 Protein
Cited by: 3
Author(s): Andrew Marsh, Katherine Casey-Green, Fay Probert, David M. Withall, Daniel A. Mitchell, Suzanne J. Dilly, Sean James, Wade R. Dimitri, Sweta Ladwa, Paul C. Taylor, Donald R. J. Singer
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0254678

Integrative bioinformatics approaches to map key biological markers and therapeutic drugs in Extramammary Paget’s disease of the scrotum
Cited by: 12
Author(s): Nosheen Fatima, Muhammad Hamzah Saleem, Jen‐Tsung Chen, Muhammad Rizwan Javed, Wafa Abdullah I. Al-Megrin, Sidra Aslam
Software Mentions: 1
Published: about 5 years ago

10.1186/s13059-019-1707-2

Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight
Cited by: 116
Author(s): Mark T.W. Ebbert, Tanner D. Jensen, Karen Jansen-West, Jonathon P. Sens, Joseph S. Reddy, Perry G. Ridge, John S. K. Kauwe, Véronique V. Belzil, Luc Pregent, Minerva M. Carrasquillo, Dirk Keene, Eric B. Larson, Paul K. Crane, Yan W. Asmann, Nilüfer Ertekin-Taner, Steven G. Younkin, Owen A. Ross, Rosa Rademakers, Leonard Petrucelli, John Denis Fryer
Software Mentions: 1
Published: over 7 years ago

10.3390/diagnostics11081357

Postmortem Cardiopulmonary Pathology in Patients with COVID-19 Infection: Single-Center Report of 12 Autopsies from Lausanne, Switzerland
Cited by: 8
Author(s): Sabina Berezowska, Karine Lefort, Kalliopi Ioannidou, Daba-Rokhya Ndiaye, Damien Maison, Constantinos Petrovas, Samuel Rotman, Nathalie Piazzon, Dina Milowich, Nathalie Sala, Chun‐Yi Tsai, Eléonore Multone, Pierre‐Yves Bochud, Mauro Oddo, Bettina Bisig, Laurence de Leval
Software Mentions: 1
Published: about 5 years ago

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