cran: geepack | Projects | Ecosyste.ms: Papers

10.1186/s12889-021-11060-9

Identifying US County-level characteristics associated with high COVID-19 burden
Cited by: 9
Author(s): Daniel Li, Sheila M. Gaynor, Corbin Quick, Jarvis T. Chen, Briana Stephenson, Brent A. Coull, Xihong Lin
Software Mentions: 14
Published: over 3 years ago

10.1186/s13073-021-00869-z

Microbiota-associated risk factors for asymptomatic gut colonisation with multi-drug-resistant organisms in a Dutch nursing home
Cited by: 13
Author(s): Quinten R Ducarmon, Elisabeth M. Terveer, Sam Nooij, Michelle N Bloem, Karuna E W Vendrik, Monique A. A. Caljouw, Ingrid M J G Sanders, S.M. van Dorp, M.C. Wong, Romy D. Zwittink, Ed J. Kuijper
Software Mentions: 12
Published: over 3 years ago

10.3897/BDJ.6.e20760

spind: an R Package to Account for Spatial Autocorrelation in the Analysis of Lattice Data
Cited by: 7
Author(s): Gudrun Carl, Sam Levin, Ingolf Kühn
Software Mentions: 11
Published: almost 7 years ago

10.1007/s00228-020-03052-2

Potentially inappropriate prescribing in older hospitalized Dutch patients according to the STOPP/START criteria v2: a longitudinal study
Cited by: 9
Author(s): Birgit A. Damoiseaux-Volman, Stephanie Medlock, Kimmy Raven, Danielle Sent, Johannes A. Romijn, Nathalie van der Velde, Ameen Abu‐Hanna
Software Mentions: 10
Published: about 4 years ago

10.1371/journal.pntd.0007360

Seasonal patterns of dengue fever in rural Ecuador: 2009-2016
Cited by: 12
Author(s): Rachel Sippy, Diego Herrera, David Gaus, Ronald E. Gangnon, Jonathan A. Patz, Jorge E. Osorio
Software Mentions: 10
Published: over 5 years ago

10.1017/S0950268820000746

Risk of bacteremia in patients presenting with shaking chills and vomiting - a prospective cohort study
Cited by: 2
Author(s): Madlene Holmqvist, Malin Inghammar, Lisa I. Påhlman, John H. Boyd, Per Åkesson, Adam Linder, Fredrik Kahn
Software Mentions: 10
Published: almost 5 years ago

10.1080/0886022X.2021.1937220

Dynamics in perioperative neutrophil-to-lymphocyte*platelet ratio as a predictor of early acute kidney injury following cardiovascular surgery
Cited by: 11
Author(s): Yang Li, Zhouping Zou, Yunlu Zhang, Bowen Zhu, Yuping Ning, Bo Shen, Chunsheng Wang, Zhe Luo, Jiacheng Xu, Xiaoqiang Ding
Software Mentions: 9
Published: almost 4 years ago

10.1002/ece3.6190

Friend or foe? A parasitic wasp shifts the cost/benefit ratio in a nursery pollination system impacting plant fitness
Cited by: 2
Author(s): Carmen Villacañas de Castro, Thomas S. Hoffmeister
Software Mentions: 9
Published: over 4 years ago

10.1186/s40168-020-00887-w

Gut microbiota modulation with long-chain corn bran arabinoxylan in adults with overweight and obesity is linked to an individualized temporal increase in fecal propionate
Cited by: 73
Author(s): Nguyen K. Nguyen, Edward C. Deehan, Zhengxiao Zhang, Mingliang Jin, Nami Baskota, María Elisa Pérez-Muñoz, Janis Cole, Yunus E. Tunçil, Benjamin Seethaler, Ting Wang, Martine Laville, Nathalie M. Delzenne, Stephan C. Bischoff, Bruce R. Hamaker, Inés Martínez, Dan Knights, Jeffrey A. Bakal, Carla M. Prado, Jens Walter
Software Mentions: 9
Published: over 4 years ago

10.1186/1475-2875-11-374

Electric nets and sticky materials for analysing oviposition behaviour of gravid malaria vectors
Cited by: 22
Author(s): Sisay Dugassa, Jenny M. Lindh, Stephen J. Torr, Florence Oyieke, Steve W. Lindsay, Ulrike Fillinger
Software Mentions: 9
Published: about 12 years ago

10.1371/journal.pone.0151940

In-Hospital Disease Burden of Sarcoidosis in Switzerland from 2002 to 2012
Cited by: 30
Author(s): Susanne Pohle, Florent Baty, Martin Brutsche
Software Mentions: 8
Published: almost 9 years ago

10.1186/s12936-015-0768-2

Analysing the oviposition behaviour of malaria mosquitoes: design considerations for improving two-choice egg count experiments
Cited by: 18
Author(s): Michael N. Okal, Jenny M. Lindh, Stephen J. Torr, Elizabeth W Masinde, Benedict Orindi, Steve W. Lindsay, Ulrike Fillinger
Software Mentions: 8
Published: over 9 years ago

10.1371/journal.pone.0100570

LADES: A Software for Constructing and Analyzing Longitudinal Designs in Biomedical Research
Cited by: 0
Author(s): Alan Vázquez-Alcocer, Daniel Ladislao Garzón-Cortes, Rosa Sánchez‐Casas
Software Mentions: 8
Published: over 10 years ago

10.1038/s42003-020-01174-y

Chemically induced mutations in a MutaMouse reporter gene inform mechanisms underlying human cancer mutational signatures
Cited by: 12
Author(s): Marc A. Beal, Matthew J. Meier, Danielle P. LeBlanc, Clotilde Maurice, Jason M. O’Brien, Carole L. Yauk, Francesco Marchetti
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pone.0219960

Early treated HIV-infected children remain at risk of growth retardation during the first five years of life: Results from the ANRS-PEDIACAM cohort in Cameroon
Cited by: 7
Author(s): Casimir Ledoux Sofeu, Mathurin Cyrille Tejiokem, Calixte Ida Penda, Camélia Protopopescu, Francis Atéba Ndongo, Suzie Tetang Ndiang, Georgette Guemkam, Josiane Warszawski, Albert Faye, Roch Giorgi
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0200565

Using social media to quantify spatial and temporal dynamics of nature-based recreational activities
Cited by: 60
Author(s): Francesca Mancini, George M. Coghill, David Lusseau
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pone.0120800

Seasonal Patterns of Hormones, Macroparasites, and Microparasites in Wild African Ungulates: The Interplay among Stress, Reproduction, and Disease
Cited by: 57
Author(s): Carrie A. Cizauskas, Wendy C. Turner, Neville Pitts, Wayne M. Getz
Software Mentions: 7
Published: over 9 years ago

10.1186/s12888-021-03501-x

Validation of case definitions of depression derived from administrative data against the CIDI-SF as reference standard: results from the PROspective Québec (PROQ) study
Cited by: 3
Author(s): Ana Paula Bruno Pena-Gralle, Denis Talbot, Xavier Trudel, Karine Aubé, Alain Lesage, Sophie Lauzier, Alain Milot, Chantal Brisson
Software Mentions: 7
Published: about 3 years ago

10.1038/srep34220

Widespread DNA hypomethylation and differential gene expression in Turner syndrome
Cited by: 99
Author(s): Christian Trolle, Morten Muhlig Nielsen, Anne Skakkebæk, Philippe Lamy, Søren Vang, Jakob Hedegaard, Iver Nordentoft, Torben F. Ørntoft, Jakob Skou Pedersen, Claus Højbjerg Gravholt
Software Mentions: 6
Published: about 8 years ago

10.1002/ece3.5202

Chemical defense of toad tadpoles under risk by four predator species
Cited by: 15
Author(s): Bálint Üveges, Márk Szederkényi, Katharina Mahr, Ágnes M. Móricz, Dániel Krüzselyi, Veronika Bókony, Herbert Hoi, Attila Hettyey
Software Mentions: 6
Published: over 5 years ago

10.1111/cea.13869

Association between nasal and nasopharyngeal bacterial colonization in early life and eczema phenotypes
Cited by: 2
Author(s): Chen Hu, Liesbeth Duijts, Evelien R. van Meel, Kirsten I M Looman, Jessica C. Kiefte–de Jong, Luba M. Pardo, Dirk Jan Hijnen, Suzanne G M A Pasmans, Johan C. de Jongste, Henriëtte A. Moll, Tamar Nijsten
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0063285

Comorbidities and Burden of COPD: A Population Based Case-Control Study
Cited by: 91
Author(s): Florent Baty, Paul Martin Putora, Bruno Isenring, Torsten Blum, Martin Brutsche
Software Mentions: 6
Published: over 11 years ago

10.1038/s41380-020-0669-9

Transcriptome of iPSC-derived neuronal cells reveals a module of co-expressed genes consistently associated with autism spectrum disorder
Cited by: 37
Author(s): Karina Griesi-Oliveira, Mariana Soares Fogo, Bruna G G Pinto, Aline Yasuda Alves, Adriano K. Suzuki, Andressa Gois Morales, Suzana Ezquina, Omar Sosa, Gavin J. Sutton, Daniele Yumi Sunaga-Franze, Ana Paula Silva Bueno, Gabriela Seabra, Luis Roberto Sardinha, Silvia Souza da Costa, Carla Rosenberg, Elaine Cristina Zachi, Andréa L. Sertié, Daniel Martins‐de‐Souza, Eduardo M. Reis, Irina Voineagu, Maria Rita Passos‐Bueno
Software Mentions: 6
Published: almost 5 years ago

10.1186/s13071-015-0860-z

Parasites and vectors of malaria on Rusinga Island, Western Kenya
Cited by: 24
Author(s): Evelyn A Olanga, Lawrence Okombo, LW Irungu, Wolfgang R Mukabana
Software Mentions: 6
Published: over 9 years ago

10.1371/journal.pone.0023024

Temporal Retinal Nerve Fiber Loss in Patients with Spinocerebellar Ataxia Type 1
Cited by: 56
Author(s): Sarah Stricker, Timm Oberwahrenbrock, Hanna Zimmermann, Jan Schroeter, Matthias Endres, Alexander U. Brandt, Friedemann Paul
Software Mentions: 5
Published: over 13 years ago

10.1186/s12889-016-2893-4

Intimate partner violence norms cluster within households: an observational social network study in rural Honduras
Cited by: 32
Author(s): Holly B. Shakya, Dominic Hughes, Derek Stafford, Nicholas A. Christakis, James H. Fowler, Jay G. Silverman
Software Mentions: 5
Published: almost 9 years ago

10.3389/fpsyg.2018.02296

Validation of the Substance Use Risk Profile Scale (SURPS) With Bulgarian Substance Dependent Individuals
Cited by: 13
Author(s): Elizabeth C. Long, Svetla Milcheva, Elena Psederska, Georgi Vasilev, Kiril Bozgunov, Dimitar Nedelchev, Nathan A. Gillespie, Jasmin Vassileva
Software Mentions: 5
Published: about 6 years ago

10.1186/s12890-018-0668-7

Heparin-binding protein in sputum as a marker of pulmonary inflammation, lung function, and bacterial load in children with cystic fibrosis
Cited by: 11
Author(s): Gisela Hovold, Victoria Palmcrantz, Fredrik Kahn, Arne Egesten, Lisa I. Påhlman
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0121954

Perinatal Overnutrition Exacerbates Adipose Tissue Inflammation Caused by High-Fat Feeding in C57BL/6J Mice
Cited by: 25
Author(s): Brandon D. Kayser, Michael I. Goran, Sébastien G. Bouret
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pmed.1003151

Impact of physicians’ participation in non-interventional post-marketing studies on their prescription habits: A retrospective 2-armed cohort study in Germany
Cited by: 4
Author(s): Cora Koch, Jörn Schleeff, Franka Techen, Daniel Wollschläger, Gisela Schott, Ralf Kölbel, Klaus Lieb
Software Mentions: 5
Published: over 4 years ago

10.1038/s41598-018-34619-w

A multiscale study of fungal endophyte communities of the foliar endosphere of native rubber trees in Eastern Amazon
Cited by: 28
Author(s): Aline B. M. Vaz, Paula Luize Camargos Fonseca, Fernanda Badotti, Demetra Skaltsas, Luiz Marcelo Ribeiro Tomé, Allefi C. Silva, Mayara C. Cunha, Marco A. Soares, Vera Lúcia dos Santos, Guilherme Oliveira, Priscilla Chaverri, Aristóteles Goés-Neto
Software Mentions: 5
Published: about 6 years ago

10.1186/s12889-019-6565-z

Socioeconomic and environmental factors associated with malaria hotspots in the Nanoro demographic surveillance area, Burkina Faso
Cited by: 30
Author(s): Toussaint Rouamba, Seydou Nakanabo‐Diallo, Karim Derra, Eli Rouamba, Adama Kazienga, Yasuko Inoue, Ernest Ouédraogo, Moussa Waongo, Sokhna Dieng, Abdoulaye Guindo, Boukary Ouédraogo, Kankoé Sallah, Seydou Barro, Pascal Yaka, Fati Kirakoya‐Samadoulougou, Halidou Tinto, Jean Gaudart
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0164865

Effects of Secondary Hyperparathyroidism Treatment on Improvement in Anemia: Results from the MBD-5D Study
Cited by: 23
Author(s): Motoko Tanaka, Kazuki Yoshida, Shingo Fukuma, Kazuko Ito, Kazutaka Matsushita, Masafumi Fukagawa, Shunichi Fukuhara, Tadao Akizawa
Software Mentions: 5
Published: about 8 years ago

10.1186/s12862-017-0916-0

Spatial turnover in host-plant availability drives host-associated divergence in a South African leafhopper (Cephalelus uncinatus)
Cited by: 9
Author(s): Willem J. Augustyn, Bruce Anderson, Jeroen F. van der Merwe, Allan G. Ellis
Software Mentions: 5
Published: almost 8 years ago

10.1186/s13063-021-05543-8

Analysis of contamination in cluster randomized trials of malaria interventions
Cited by: 5
Author(s): Lea Multerer, Tracy R. Glass, Fiona Vanobberghen, T. Smith
Software Mentions: 5
Published: over 3 years ago

10.1093/rheumatology/keaa497

Identification and prediction of novel classes of long-term disease trajectories for patients with juvenile dermatomyositis using growth mixture models
Cited by: 5
Author(s): Claire T. Deakin, Charalampia Papadopoulou, Liza McCann, Neil Martin, Muthana Al-Obaidi, Sandrine Compeyrot-Lacassagne, Clarissa Pilkington, Sarah Tansley, Neil McHugh, Lucy R. Wedderburn, Bianca L De Stavola
Software Mentions: 5
Published: about 4 years ago

10.1038/s42003-018-0041-7

Ecology determines how low antibiotic concentration impacts community composition and horizontal transfer of resistance genes
Cited by: 65
Author(s): Johannes Cairns, Lasse Ruokolainen, Jenni Hultman, Manu Tamminen, Marko Virta, Teppo Hiltunen
Software Mentions: 5
Published: over 6 years ago

10.1186/s13148-018-0588-7

Analysis of repeated leukocyte DNA methylation assessments reveals persistent epigenetic alterations after an incident myocardial infarction
Cited by: 18
Author(s): Cavin Ward‐Caviness, Golareh Agha, Brian H. Chen, Liliane Pfeiffer, Rory Wilson, Peter Wolf, Christian Gieger, Joel Schwartz, Pantel Vokonas, Lifang Hou, Allan C. Just, Stefania Bandinelli, Dena G. Hernandez, Andrew B. Singleton, Holger Prokisch, Thomas Meitinger, Gabi Kastenmüller, Luigi Ferrucci, Andrea A. Baccarelli, Mélanie Waldenberger, Annette Peters
Software Mentions: 5
Published: about 6 years ago

10.1038/srep43323

Development of a pipeline for automated, high-throughput analysis of paraspeckle proteins reveals specific roles for importin α proteins
Cited by: 6
Author(s): Andrew T. Major, Yoichi Miyamoto, Camden Lo, David A. Jans, Kate Loveland
Software Mentions: 5
Published: almost 8 years ago

10.3389/fped.2020.599638

Digital Simulation Improves, Maintains, and Helps Transfer Health-Care Providers' Neonatal Resuscitation Knowledge
Cited by: 6
Author(s): Simran K. Ghoman, Maria Cutumisu, Georg M. Schmölzer
Software Mentions: 4
Published: almost 4 years ago

10.3389/fnins.2021.546312

Clear and Consistent Imaging of Hippocampal Internal Architecture With High Resolution Multiple Image Co-registration and Averaging (HR-MICRA)
Cited by: 6
Author(s): Lawrence Ver Hoef, Hrishikesh Deshpande, Joel K. Curé, Goutham Selladurai, Julia Fleming Beattie, Richard E. Kennedy, Robert C. Knowlton, Jerzy P. Szaflarski
Software Mentions: 4
Published: almost 4 years ago

10.3389/fphys.2020.00522

Ambient Temperature Cycles Affect Daily Torpor and Hibernation Patterns in Malagasy Tenrecs
Cited by: 6
Author(s): Kathrin H. Dausmann, Danielle L. Levesque, Jens Wein, Julia Nowack
Software Mentions: 4
Published: over 4 years ago

10.1186/s12974-016-0720-6

MOG-IgG in NMO and related disorders: a multicenter study of 50 patients. Part 4: Afferent visual system damage after optic neuritis in MOG-IgG-seropositive versus AQP4-IgG-seropositive patients
Cited by: 197
Author(s): Florence Pache, Hanna Zimmermann, Janine Mikolajczak, Stefan Schumacher, Anna Lacheta, Frederike Cosima Oertel, Judith Bellmann‐Strobl, Sven Jarius, Brigitte Wildemann, Markus Reindl, Amy Waldman, Kerstin Soelberg, Nasrin Asgari, Marius Ringelstein, Orhan Aktaş, Nikolai Gross, Mathias Buttmann, Thomas Ach, Klemens Ruprecht, Friedemann Paul, Alexander U. Brandt
Software Mentions: 4
Published: about 8 years ago

10.1186/s40168-015-0089-2

Linear growth faltering in infants is associated with Acidaminococcus sp. and community-level changes in the gut microbiota
Cited by: 101
Author(s): Ethan Gough, David A. Stephens, Erica E. M. Moodie, Andrew J. Prendergast, Rebecca J. Stoltzfus, Jean H. Humphrey, Amee R. Manges
Software Mentions: 4
Published: over 9 years ago

10.1007/s13592-019-00716-6

Assessing virulence of Varroa destructor mites from different honey bee management regimes
Cited by: 9
Author(s): Travis L. Dynes, Jennifer A. Berry, Keith S. Delaplane, Jacobus C. de Roode, Berry J. Brosi
Software Mentions: 4
Published: about 5 years ago

10.1186/s12891-018-2006-x

No difference in the functional improvements between unilateral and bilateral total knee replacements
Cited by: 16
Author(s): Yao-Ming Huang, Chin Lin, Jung-Mou Yang, Leou-Chyr Lin, Chih-Yuan Mou, Kwo-Tsao Chiang, Man-Gang Lee, Hsin‐An Chang, Hsueh-Lu Chang, Wan‐Fu Su, Shih-Jen Yeh, Hung Chang, Chih‐Chien Wang, Sui-Lung Su
Software Mentions: 4
Published: over 6 years ago

10.3390/ijerph18168602

Using Latent Class Analysis to Identify Health Lifestyle Profiles and Their Association with Suicidality among Adolescents in Benin
Cited by: 2
Author(s): Fanny Hoogstoel, Lucresse Corine Fassinou, Sékou Samadoulougou, Céline Mahieu, Yves Coppieters, Fati Kirakoya‐Samadoulougou
Software Mentions: 4
Published: over 3 years ago

10.3390/ijerph18136934

A Latent Class Analysis of Health Lifestyles in Relation to Suicidality among Adolescents in Mauritius
Cited by: 6
Author(s): Fanny Hoogstoel, Sékou Samadoulougou, Vincent Lorant, Fati Kirakoya‐Samadoulougou
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0243422

Socioeconomic and behavioral determinants of cardiovascular diseases among older adults in Belgium and France: A longitudinal analysis from the SHARE study
Cited by: 6
Author(s): Hamid Yimam Hassen, Hilde Bastiaens, Kathleen Van Royen, Steven Abrams
Software Mentions: 4
Published: about 4 years ago

10.1038/s41598-020-77160-5

Pupillary light reflex in ethambutol-induced optic neuropathy
Cited by: 0
Author(s): Yung Ju Yoo, Jeong Min Hwang, Hee Kyung Yang
Software Mentions: 4
Published: about 4 years ago

10.1038/s41598-020-72296-w

Sex-related impacts on clinical outcomes after percutaneous coronary intervention
Cited by: 6
Author(s): Hyun Woo Park, Seungbong Han, Gyung‐Min Park, Soe Hee Ann, Jon Suh, Yong-Giun Kim, Seung-Whan Lee
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-019-46251-3

In vivo structural and functional assessment of optic nerve damage in neuromyelitis optica spectrum disorders and multiple sclerosis
Cited by: 28
Author(s): Marco Vabanesi, Marco Pisa, Simone Guerrieri, Lucia Moiola, Marta Radaelli, S. Medaglini, Vittorio Martinelli, Gıancarlo Comı, Letizia Leocani
Software Mentions: 4
Published: over 5 years ago

10.1002/sim.7334

Missing binary outcomes under covariate-dependent missingness in cluster randomised trials
Cited by: 7
Author(s): Anower Hossain, Karla Díaz-Ordaz, Jonathan Bartlett
Software Mentions: 4
Published: over 7 years ago

10.1017/S1469440918003643

Persistence and gender differences in protection against severe fever with thrombocytopaenia syndrome virus with natural infection: a 4-year follow-up and mathematical prediction study
Cited by: 3
Author(s): Rui Qi, Yu Huang, Xue Jie Yu
Software Mentions: 4
Published: almost 6 years ago

10.1186/1471-2350-12-151

Disorder-specific effects of polymorphisms at opposing ends of the Insulin Degrading Enzymegene
Cited by: 10
Author(s): Jasmin Bartl, Claus‐Jürgen Scholz, Margareta Hinterberger, Susanne Jungwirth, Ildiko Wichart, Michael Rainer, Susanne Kneitz, W Danielczyk, Karl Heinz Tragl, Peter Fischer, Peter Riederer, Edna Grünblatt
Software Mentions: 4
Published: about 13 years ago

10.1371/journal.pntd.0007963

Effects of improved water, sanitation, and hygiene and improved complementary feeding on environmental enteric dysfunction in children in rural Zimbabwe: A cluster-randomized controlled trial
Cited by: 18
Author(s): Ethan Gough, Lawrence H. Moulton, Kuda Mutasa, Robert Ntozini, Rebecca J. Stoltzfus, Florence D Majo, Laura E. Smith, Gordana Panić, Natasa Giallourou, Mark Jamell, Peter Kosek, Jonathan R. Swann, Jean H. Humphrey, Andrew J. Prendergast
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pmed.1003336

Antibiotic prescribing for lower UTI in elderly patients in primary care and risk of bloodstream infection: A cohort study using electronic health records in England
Cited by: 16
Author(s): Laura Shallcross, Patrick Rockenschaub, Ruth Blackburn, Irwin Nazareth, Nick Freemantle, Andrew Hayward
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0164330

Response of Two Mytilids to a Heatwave: The Complex Interplay of Physiology, Behaviour and Ecological Interactions
Cited by: 32
Author(s): Celia Olabarria, Ignácio Gestoso, Fernando P. Lima, Elsa Vázquez, Luc A. Comeau, Filipe Veloso Gomes, Rui Seabra, José M. F. Babarro
Software Mentions: 4
Published: about 8 years ago

10.1371/journal.pone.0216286

Reduced density and visually complex apiaries reduce parasite load and promote honey production and overwintering survival in honey bees
Cited by: 28
Author(s): Travis L. Dynes, Jennifer A. Berry, Keith S. Delaplane, Berry J. Brosi, Jacobus C. de Roode
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0228849

Prevalence and correlates of anal intercourse among female sex workers in eSwatini
Cited by: 3
Author(s): Branwen Nia Owen, Mathieu M-Giroux, Sindy Matse, Zandile Mnisi, Stefan Baral, Sosthenes Ketende, Rebecca F. Baggaley, Marie Claude Boily
Software Mentions: 4
Published: almost 5 years ago

10.7717/peerj.2575

Monte Carlo simulation of OLS and linear mixed model inference of phenotypic effects on gene expression
Cited by: 1
Author(s): Jeffrey A. Walker
Software Mentions: 4
Published: about 8 years ago

10.3390/pathogens10030309

Impact of Annual Albendazole versus Four-Monthly Test-and-Treat Approach of Intestinal Parasites on Children Growth—A Longitudinal Four-Arm Randomized Parallel Trial during Two Years of a Community Follow-Up in Bengo, Angola
Cited by: 2
Author(s): Carolina Gasparinho, Aguinaldo Kanjungo, Félix Zage, Isabel Clemente, Ana Santos-Reis, Miguel Brito, José Carlos Sousa-Figueiredo, Filomeno Fortes, Luzia Gonçalves
Software Mentions: 4
Published: almost 4 years ago

10.1186/s13071-018-2891-8

Laboratory studies on the oviposition stimuli of Culicoides stellifer (Diptera: Ceratopogonidae), a suspected vector of Orbiviruses in the United States
Cited by: 17
Author(s): Dinesh Erram, Nathan D. Burkett‐Cadena
Software Mentions: 4
Published: over 6 years ago

10.1186/1471-2105-12-273

Gene set analysis for longitudinal gene expression data
Cited by: 11
Author(s): Ke Zhang, Haiyan Wang, Arne C. Bathke, Solomon W. Harrar, Hans‐Peter Piepho, Youping Deng
Software Mentions: 4
Published: over 13 years ago

10.1371/journal.pone.0071145

Optic Neuritis Is Associated with Inner Nuclear Layer Thickening and Microcystic Macular Edema Independently of Multiple Sclerosis
Cited by: 100
Author(s): Falko Kaufhold, Hanna Zimmermann, Eric Schneider, Klemens Ruprecht, Friedemann Paul, Timm Oberwahrenbrock, Alexander U. Brandt
Software Mentions: 4
Published: over 11 years ago

10.1186/s12889-019-7521-7

Methods for detecting seasonal influenza epidemics using a school absenteeism surveillance system
Cited by: 9
Author(s): Madeline A. Ward, Anu Stanley, Lorna E. Deeth, Rob Deardon, Zeny Feng, Lise A. Trotz-Williams
Software Mentions: 4
Published: over 5 years ago

10.3390/insects11060381

Suitability and Profitability of a Cereal Aphid for the Parasitoid Aphidius platensis in the Context of Conservation Biological Control of Myzus persicae in Orchards
Cited by: 6
Author(s): Jeniffer K. Alvarez-Baca, Armando Alfaro-Tapia, Blas Lavandero, Cécile Le Lann, Joan van Baaren
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2017.00955

Campylobacter coli in Organic and Conventional Pig Production in France and Sweden: Prevalence and Antimicrobial Resistance
Cited by: 36
Author(s): Isabelle Kempf, Annaëlle Kérouanton, Stéphanie Bougeard, Bérengère Nagard, Valérie Rose, Gwénaëlle Mourand, Julia Österberg, Martine Denis, Björn Bengtsson
Software Mentions: 3
Published: over 7 years ago

10.2196/27610

Initial Outcomes of Transdiagnostic Internet-Delivered Cognitive Behavioral Therapy Tailored to Public Safety Personnel: Longitudinal Observational Study
Cited by: 14
Author(s): Heather D. Hadjistavropoulos, Hugh C. McCall, David Thiessen, Ziyin Huang, R. Nicholas Carleton, Blake F. Dear, Nickolai Titov
Software Mentions: 3
Published: over 3 years ago

10.1098/rsob.170153

The <i>NDE1</i> genomic locus can affect treatment of psychiatric illness through gene expression changes related to microRNA-484
Cited by: 12
Author(s): Nicholas J. Bradshaw, Liisa Ukkola-Vuoti, Maiju Pankakoski, Amanda B Zheutlin, Alfredo Ortega‐Alonso, Minna Holm, Vishal Sinha, Sebastian Therman, Tiina Paunio, Jaana Suvisaari, Jouko Lönnqvist, Tyrone D. Cannon, Jari Haukka, William Hennah
Software Mentions: 3
Published: about 7 years ago

10.1007/s00227-014-2422-x

Factors affecting the foraging behaviour of the European shag: implications for seabird tracking studies
Cited by: 21
Author(s): Louise Soanes, John P. Y. Arnould, Stephen Dodd, G. C. Milligan, Jonathan A. Green
Software Mentions: 3
Published: over 10 years ago

10.3390/jof7040261

A Medium-Term Field Experiment to Study the Effect of Managing Soil Chemical Properties on Fusarium Wilt in Banana (Musa AAA)
Cited by: 8
Author(s): Rafael A Segura M, J.J. Stoorvogel, Fabio A Blanco R, Jorge A Sandoval F
Software Mentions: 3
Published: over 3 years ago

10.1186/s40942-020-00209-0

Topographic analysis of macular choriocapillaris flow deficits in diabetic retinopathy using swept–source optical coherence tomography angiography
Cited by: 17
Author(s): Isaac Gendelman, A. Yasin Alibhai, Eric M. Moult, Emily S. Levine, Phillip X. Braun, Nihaal Mehta, Yi Zhao, Akihiro Ishibazawa, Osama Sorour, Caroline R. Baumal, André J. Witkin, Elias Reichel, James G. Fujimoto, Jay S. Duker, Nadia K. Waheed
Software Mentions: 3
Published: almost 5 years ago

10.1002/ece3.3396

Survival of a specialist natural enemy experiencing resource competition with an omnivorous predator when sharing the invasive prey <i>Tuta absoluta</i>
Cited by: 16
Author(s): Anaïs Chailleux, Anthony Droui, Philippe Béarez, Nicolas Desneux
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0136337

An Analysis of Factors Affecting Genotyping Success from Museum Specimens Reveals an Increase of Genetic and Morphological Variation during a Historical Range Expansion of a European Spider
Cited by: 15
Author(s): Henrik Krehenwinkel, Stanislav Pekár
Software Mentions: 3
Published: over 9 years ago

10.3390/ijerph17124275

Longitudinal Association of Built Environment Pattern with Physical Activity in a Community-Based Cohort of Elderly Hong Kong Chinese: A Latent Profile Analysis
Cited by: 6
Author(s): Jing Lin, Faye Ya-Fen Chan, Jason Leung, Blanche Yu, Zhonghua Lu, Jean Woo, Timothy Kwok, Kevin Ka-Lun Lau
Software Mentions: 3
Published: over 4 years ago

10.7554/eLife.58435

Light-induced engagement of microglia to focally remodel synapses in the adult brain
Cited by: 20
Author(s): Carla Cangalaya, Stoyan Stoyanov, Klaus–Dieter Fischer, Alexander Dityatev
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-021-93104-z

Bat aggregational response to pest caterpillar emergence
Cited by: 10
Author(s): J. Blažek, Adam Konečný, Tomáš Bartonička
Software Mentions: 3
Published: over 3 years ago

10.3390/s21134353

Whole-Body Movements Increase Arm Use Outcomes of Wrist-Worn Accelerometers in Stroke Patients
Cited by: 10
Author(s): G. Ruben H. Regterschot, Ruud W. Selles, Gerard M. Ribbers, Johannes B. J. Bussmann
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-020-74077-x

Early trajectories of benthic coral reef communities following the 2015/16 coral bleaching event at remote Aldabra Atoll, Seychelles
Cited by: 20
Author(s): Anna Koester, Valentina Migani, Nancy Bunbury, Amanda K. Ford, Cheryl Sanchez, Christian Wild
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0247157

An adapted smoking-cessation intervention for Turkish-speaking migrants in Switzerland: Predictors of smoking outcomes at one-year follow-up
Cited by: 1
Author(s): Raquel Paz Castro, Michael P Schaub, Corina Salis Gross
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-017-07509-w

Natural enemies partially compensate for warming induced excess herbivory in an organic growth system
Cited by: 6
Author(s): Beleznai Orsolya, Jean-Luc Dreyer, Zoltán Tóth, Ferenc Samu
Software Mentions: 3
Published: over 7 years ago

10.1136/bmj.n1743

Terminal decline in objective and self-reported measures of motor function before death: 10 year follow-up of Whitehall II cohort study
Cited by: 14
Author(s): Benjamin Landré, Aurore Fayossé, Céline Ben Hassen, Marcos D Machado‐Fragua, Julien Dumurgier, Mika Kivimäki, Séverine Sabia, Archana Singh‐Manoux
Software Mentions: 3
Published: over 3 years ago

10.1186/s12894-016-0147-5

The diagnostic accuracy of urine-based tests for bladder cancer varies greatly by patient
Cited by: 31
Author(s): Ajay Gopalakrishna, Thomas A. Longo, Joseph J. Fantony, Richmond Owusu, Wen‐Chi Foo, Rajesh Dash, Brant A. Inman
Software Mentions: 3
Published: over 8 years ago

10.1186/s12898-014-0027-3

Gastrointestinal helminths may affect host susceptibility to anthrax through seasonal immune trade-offs
Cited by: 27
Author(s): Carrie A. Cizauskas, Wendy C. Turner, Bettina Wagner, Martina Küsters, Russell E. Vance, Wayne M. Getz
Software Mentions: 3
Published: about 10 years ago

10.1186/s13063-017-2248-1

Estimating relative risks in multicenter studies with a small number of centers — which methods to use? A simulation study
Cited by: 27
Author(s): Claudia Pedroza, Van Thi Thanh Truong
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pbio.2001549

Accurate predictions of population-level changes in sequence and structural properties of HIV-1 Env using a volatility-controlled diffusion model
Cited by: 21
Author(s): Orlando DeLeon, Hagit Hodis, Yunxia O’Malley, Jacklyn Johnson, Hamid Salehiniya, Yinjie Zhai, Elizabeth M. Winter, Claire Remec, Noah Eichelberger, Brandon Van Cleave, Ramya Puliadi, Robert D. Harrington, Jack T. Stapleton, Hillel Haim
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0232397

Correlation between musculoskeletal structure of the hand and primate locomotion: Morphometric and mechanical analysis in prehension using the cross- and triple-ratios
Cited by: 6
Author(s): Toshihiro Tamagawa, Torbjörn Lundh, Kenji Shigetoshi, Norihisa Nitta, Noritoshi Ushio, Toshiro Inubushi, Akihiko Shiino, Anders Karlsson, Takayuki Inoue, Yutaka Mera, Kodai Hino, Masaharu Komori, Shigehiro Morikawa, Shuji Sawajiri, Shigeyuki Naka, Satoru Honma, Tomoko Kimura, Yasuhiro Uchimura, Shunsuke Imai, Naoko Egi, Hiroki Otani, Jun Udagawa
Software Mentions: 3
Published: over 4 years ago

10.1001/jamanetworkopen.2021.10268

Comparison of Adverse Events Among Home- vs Facility-Administered Biologic Infusions, 2007-2017
Cited by: 5
Author(s): Matthew Baker, Yingjie Weng, Robert Fairchild, Neera Ahuja, Nidhi Rohatgi
Software Mentions: 3
Published: over 3 years ago

10.1111/1365-2664.12678

Avoidance of wind farms by harbour seals is limited to pile driving activities
Cited by: 48
Author(s): Debbie J. F. Russell, Gordon D. Hastie, David Thompson, Vincent M. Janik, Philip S. Hammond, Lindesay Scott‐Hayward, Jason Matthiopoulos, Esther Lane Jones, Bernie McConnell
Software Mentions: 3
Published: over 8 years ago

10.1186/s13071-016-1312-0

New approaches to measuring anthelminthic drug efficacy: parasitological responses of childhood schistosome infections to treatment with praziquantel
Cited by: 28
Author(s): Martin Walker, Tarub S. Mabud, Piero Olliaro, Jean T. Coulibaly, Charles H. King, Giovanna Raso, Alexandra U. Scherrer, J. Russell Stothard, José Carlos Sousa-Figueiredo, Katarina Stete, Jürg Utzinger, Marı́a-Gloria Basáñez
Software Mentions: 3
Published: almost 9 years ago

10.1371/journal.pone.0126165

An Assessment of the Effectiveness of High Definition Cameras as Remote Monitoring Tools for Dolphin Ecology Studies
Cited by: 6
Author(s): Estênio Guimarães Paiva, Chandra Salgado Kent, Marthe Monique Gagnon, Iain Parnum, Robert D. McCauley
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0104468

Characteristics of Fishing Operations, Environment and Life History Contributing to Small Cetacean Bycatch in the Northeast Atlantic
Cited by: 12
Author(s): Susie L. Brown, David G. Reid, Emer Rogan
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0081931

Habitat Hydrology and Geomorphology Control the Distribution of Malaria Vector Larvae in Rural Africa
Cited by: 33
Author(s): Andrew Hardy, Javier G. P. Gamarra, Dónall Eoin Cross, Mark G. Macklin, Mark W. Smith, Japhet Kihonda, Gerry F. Killeen, George N. Ling'ala, Christopher Thomas
Software Mentions: 3
Published: about 11 years ago

10.1111/irv.12437

Origin, distribution, and potential risk factors associated with influenza A virus in swine in two production systems in Guatemala
Cited by: 12
Author(s): Ana S. González-Reiche, Ana L. Ramírez, María L. Müller, David Orellana, Silvia M. Sosa, Pablo Ola, Jorge Paniagua, Lucía Ortiz, Jorge A. Hernández, Celia Cordón-Rosales, Daniel R. Pérez
Software Mentions: 3
Published: almost 8 years ago

10.1007/s12263-014-0408-4

Genetic associations with micronutrient levels identified in immune and gastrointestinal networks
Cited by: 12
Author(s): Melissa J. Morine, Jacqueline Pontes Monteiro, Carolyn Wise, Candee H. Teitel, Lisa Pence, Anna-leila Williams, Baitang Ning, Beverly McCabe‐Sellers, Catherine M. Champagne, J. Rick Turner, Beatrice Shelby, Margaret L. Bogle, Richard D. Beger, Corrado Priami, Jim Kaput
Software Mentions: 3
Published: over 10 years ago

10.3389/fnins.2021.708700

Foveal Remodeling of Retinal Microvasculature in Parkinson’s Disease
Cited by: 12
Author(s): Ane Murueta‐Goyena, Maitane Barrenechea, Asier Erramuzpe, Sara Teijeira-Portas, Marta Pengo, Unai Ayala, David Romero-Bascones, Marian Acera, Rocío Del Pino, Juan Carlos Gómez‐Esteban, Iñigo Gabilondo
Software Mentions: 2
Published: over 3 years ago

10.1186/s40164-017-0065-6

A randomized exploratory phase 2 study in patients with chemotherapy-related peripheral neuropathy evaluating whole-body vibration training as adjunct to an integrated program including massage, passive mobilization and physical exercises
Cited by: 40
Author(s): Stefan S. Schönsteiner, Heidi Bauder Mißbach, Axel Benner, Silja Mack, Thomas Hamel, Michael Orth, G. Bernhard Landwehrmeyer, Sigurd D. Süßmuth, Carolin Geitner, Regine Mayer-Steinacker, Anneliese Riester, Andrea Prokein, Elfriede Erhardt, Jelena Kunecki, Anna Maria Eisenschink, Rainer Rawer, Hartmut Döhner, E Kirchner, Richard F. Schlenk
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2018.00256

Prevalence and Genetic Basis of Antimicrobial Resistance in Non-aureus Staphylococci Isolated from Canadian Dairy Herds
Cited by: 50
Author(s): Diego Nobrega, Sohail Naushad, Syed Ali Raza Naqvi, Larissa Anuska Zeni Condas, Vipin Saini, John P. Kastelic, Christopher D. Luby, Jeroen De Buck, Herman W. Barkema
Software Mentions: 2
Published: almost 7 years ago

10.3389/fneur.2020.499910

Differences in Advanced Magnetic Resonance Imaging in MOG-IgG and AQP4-IgG Seropositive Neuromyelitis Optica Spectrum Disorders: A Comparative Study
Cited by: 12
Author(s): Felix Schmidt, Claudia Chien, Joseph Kuchling, Judith Bellmann‐Strobl, Klemens Ruprecht, Nadja Siebert, Susanna Asseyer, Sven Jarius, Alexander U. Brandt, Michael Scheel, Friedemann Paul
Software Mentions: 2
Published: about 4 years ago

Projects: cran: geepack

Papers Mentioning geepack 255