Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: flexsurv

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/flexsurv

Flexible Parametric Survival and Multi-State Models
18 versions
Latest release: almost 2 years ago
43 dependent packages
5,606 downloads last month

Papers Mentioning flexsurv 39

10.1098/rspb.2021.0219
Collaboration enhances career progression in academic science, especially for female researchers
Cited by: 9
Author(s): Jessica E. M. van der Wal, Rose Thorogood, Nicholas P. C. Horrocks
Software Mentions: 13
Published: about 3 years ago
10.3389/fpsyt.2019.00345
Individualized Prediction of Transition to Psychosis in 1,676 Individuals at Clinical High Risk: Development and Validation of a Multivariable Prediction Model Based on Individual Patient Data Meta-Analysis
Cited by: 25
Author(s): Aaltsje Malda, Nynke Boonstra, Hans Barf, Steven de Jong, André Alemán, Jean Addington, Marita Pruessner, Dorien H. Nieman, Lieuwe de Haan, Anthony P. Morrison, Anita Riecher-Rössler, Erich Studerus, Stephan Ruhrmann, Frauke Schultze‐Lutter, Suk Kyoon An, Shinsuke Koike, Kiyoto Kasai, Barnaby Nelson, Patrick D. McGorry, Stephen Wood, Ashleigh Lin, Alison R. Yung, Magdalena Kotlicka-Antczak, Marco Armando, Stefano Vicari, Masahiro Katsura, Kazunori Matsumoto, Sarah Durston, Tim Ziermans, Lex Wunderink, Helga K. Ising, Mark van der Gaag, Paolo Fusar‐Poli, Gerdina H. M. Pijnenborg
Software Mentions: 10
Published: over 5 years ago
10.1002/ece3.7830
Optimizing noninvasive sampling of a zoonotic bat virus
Cited by: 10
Author(s): J. R. Giles, Alison J. Peel, Konstans Wells, Raina K. Plowright, Hamish McCallum, Olivier Restif
Software Mentions: 7
Published: about 3 years ago
10.1186/1471-2334-14-539
The distribution of incubation and relapse times in experimental human infections with the malaria parasite Plasmodium vivax
Cited by: 12
Author(s): Andrew A. Lover, Xiahong Zhao, Gengfeng Zheng, Richard Coker, Alex R. Cook
Software Mentions: 7
Published: about 10 years ago
10.1371/journal.pone.0189860
Survival analysis and classification methods for forest fire size
Cited by: 14
Author(s): Pier Olivier Tremblay, Thierry Duchesne, Steven G. Cumming
Software Mentions: 7
Published: almost 7 years ago
10.1371/journal.pbio.3000556
Parental breeding age effects on descendants’ longevity interact over 2 generations in matrilines and patrilines
Cited by: 26
Author(s): Zachariah Wylde, Foteini Spagopoulou, Amy K. Hooper, Alexei A. Maklakov, Russell Bonduriansky
Software Mentions: 6
Published: almost 5 years ago
10.1186/s12874-020-01192-8
Relaxing the assumption of constant transition rates in a multi-state model in hospital epidemiology
Cited by: 3
Author(s): Martha Hill, Paul C. Lambert, Michael J. Crowther
Software Mentions: 6
Published: almost 4 years ago
10.18632/oncotarget.20266
SLC2A2 (GLUT2) as a novel prognostic factor for hepatocellular carcinoma
Cited by: 58
Author(s): Yun Hak Kim, Dae Cheon Jeong, Kyoungjune Pak, Myoung‐Eun Han, Jiyoung Kim, Liangwen Liu, Hyun Jin Kim, Tae Woo Kim, Tae Hwa Kim, Dong Choon Hyun, Sae‐Ock Oh
Software Mentions: 6
Published: over 7 years ago
10.1177/0272989X16670617
Estimation of Survival Probabilities for Use in Cost-effectiveness Analyses: A Comparison of a Multi-state Modeling Survival Analysis Approach with Partitioned Survival and Markov Decision-Analytic Modeling
Cited by: 98
Author(s): Claire Williams, James Lewsey, Daniel Mackay, Andrew Briggs
Software Mentions: 5
Published: about 8 years ago
10.1093/aje/kwy121
Estimating an Individual’s Probability of Revision Surgery After Knee Replacement: A Comparison of Modeling Approaches Using a National Data Set
Cited by: 15
Author(s): Parham Aram, Lea Trela-Larsen, Adrian Sayers, A. Hills, Ashley W Blom, Eugène McCloskey, Visakan Kadirkamanathan, J. Mark Wilkinson
Software Mentions: 5
Published: over 6 years ago
10.1186/s12874-020-01090-z
Disease progression of cancer patients during COVID-19 pandemic: a comprehensive analytical strategy by time-dependent modelling
Cited by: 7
Author(s): Atanu Bhattacharjee, Gajendra K. Vishwakarma, Souvik Banerjee, Sharvari Shukla
Software Mentions: 4
Published: over 4 years ago
10.1007/s10340-016-0757-4
Drosophila suzukii population response to environment and management strategies
Cited by: 85
Author(s): Nik G. Wiman, David A. Dalton, G. Anfora, Antonio Biondi, Joanna C. Chiu, Kent M. Daane, Beverly S. Gerdeman, A. Gottardello, Kelly A. Hamby, Rufus Isaacs, A. Grassi, C. Ioriatti, Jana C. Lee, B. Miller, Marco Valerio Rossi Stacconi, Peter W. Shearer, Lynell K. Tanigoshi, Xingeng Wang, Vaughn M. Walton
Software Mentions: 3
Published: over 8 years ago
10.1186/s13690-021-00559-7
Socioeconomic status, well-being and mortality: a comprehensive life course analysis of panel data, Germany, 1984-2016
Cited by: 13
Author(s): Diego Montaño
Software Mentions: 3
Published: over 3 years ago
10.1186/s13690-021-00617-0
Accelerated failure-time model with weighted least-squares estimation: application on survival of HIV positives
Cited by: 1
Author(s): Yesuf Abdela Mustefa, Ding-Geng Chen
Software Mentions: 3
Published: over 3 years ago
10.1186/1756-3305-6-351
Modelling adult Aedes aegypti and Aedes albopictus survival at different temperatures in laboratory and field settings
Cited by: 347
Author(s): Oliver J. Brady, Michael A. Johansson, Carlos A. Guerra, Samir Bhatt, Nick Golding, David M. Pigott, Hélène Delatte, Marta G. Grech, Paul T. Leisnham, Rafael Maciel-de-Freitas, Linda M. Styer, David L. Smith, Thomas W. Scott, Peter W. Gething, Simon I. Hay
Software Mentions: 3
Published: almost 11 years ago
10.1371/journal.pcbi.1008190
Community-level impacts of spatial repellents for control of diseases vectored by Aedes aegypti mosquitoes
Cited by: 5
Author(s): Quirine A. ten Bosch, Joseph Wagman, Fanny Castro-Llanos, Nicole L. Achee, John P. Grieco, T. Alex Perkins
Software Mentions: 3
Published: about 4 years ago
10.1371/journal.pone.0236559
Understanding resource utilization and mortality in COPD to support policy making: A microsimulation study
Cited by: 0
Author(s): Elizabeth G. Bond, Lusine Abrahamyan, Mohammad Kaviul Anam Khan, Andrea S. Gershon, Murray Krahn, Ping Li, Rajibul Mian, Nicholas Mitsakakis, Mohsen Sadatsafavi, Teresa To, Petros Pechlivanoglou
Software Mentions: 3
Published: over 4 years ago
10.1002/ece3.2382
Models of Eucalypt phenology predict bat population flux
Cited by: 29
Author(s): J. R. Giles, Raina K. Plowright, Peggy Eby, Alison J. Peel, Hamish McCallum
Software Mentions: 3
Published: about 8 years ago
10.3389/fendo.2018.00245
Drosophila Insulin-Like Peptides DILP2 and DILP5 Differentially Stimulate Cell Signaling and Glycogen Phosphorylase to Regulate Longevity
Cited by: 65
Author(s): Stephanie Post, Galina Karashchuk, John D. Wade, Waseem Sajid, Pierre De Meyts, Marc Tatar
Software Mentions: 3
Published: over 6 years ago
10.3390/ijerph15061153
Factors Contributing to the Duration of Chemotherapy-Induced Severe Oral Mucositis in Oncopediatric Patients
Cited by: 15
Author(s): Lecidâmia Cristina Leite Damascena, Nyellisonn Nando Nóbrega de Lucena, Isabella Lima Arrais Ribeiro, Tarciana Liberal Pereira de Araujo, Ricardo Dias de Castro, Paulo Rogério Ferreti Bonan, Eufrásio de Andrade Lima Neto, Luiz Medeiros de Araújo Lima Filho, Ana Maria Gondim Valença
Software Mentions: 3
Published: over 6 years ago
10.3390/jcm10132770
Effect of Hepatocellular Carcinoma Surveillance Programmes on Overall Survival in a Mixed Cirrhotic UK Population: A Prospective, Longitudinal Cohort Study
Cited by: 6
Author(s): Mohammad Inamul Haq, Thomas M Drake, Tee Lin Goh, Asma Ahmed, Ewan Forrest, Stephen T. Barclay, R Gillespie, Matthew Priest, Jeff Evans, Janet Graham, Stuart Ballantyne, Donald C. McMillan, Peter Hayes, Tom Bird, Adrian Stanley
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pntd.0006733
Estimating the effects of variation in viremia on mosquito susceptibility, infectiousness, and R0 of Zika in Aedes aegypti
Cited by: 33
Author(s): Blanka Tesla, Leah R. Demakovsky, Hannah S. Packiam, Erin A. Mordecai, Américo D. Rodríguez, Matthew H. Bonds, Melinda A. Brindley, Courtney C. Murdock
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0257569
Population level differences in overwintering survivorship of blue crabs (Callinectes sapidus): A caution on extrapolating climate sensitivities along latitudinal gradients
Cited by: 4
Author(s): Adelle I. Molina, Robert M. Cerrato, Janet A. Nye
Software Mentions: 2
Published: about 3 years ago
10.1016/j.ccell.2019.02.002
Undifferentiated Sarcomas Develop through Distinct Evolutionary Pathways
Cited by: 72
Author(s): Christopher D. Steele, Maxime Tarabichi, Dahmane Oukrif, A. D. B. Webster, Hongtao Ye, Matthew Fittall, Patrick Lombard, Iñigo Martincorena, Patrick Tarpey, Grace Collord, Kerstin Haase, Sandra J. Strauss, Fitim Berisha, Heli Vaikkinen, Pawan Dhami, Marnix Jansen, Sam Behjati, Maria Fernanda Amary, Roberto Tirabosco, Andrew Feber, Peter J. Campbell, Ludmil B. Alexandrov, Peter Van Loo, Adrienne M. Flanagan, Nischalan Pillay
Software Mentions: 2
Published: over 5 years ago
10.1111/acel.12737
The companion dog as a model for human aging and mortality
Cited by: 87
Author(s): Jessica M. Hoffman, Kate E. Creevy, Alexander Franks, Dan G. O’Neill, Daniel Promislow
Software Mentions: 2
Published: almost 7 years ago
10.1007/s10654-021-00774-0
Different approaches to quantify years of life lost from COVID-19
Cited by: 23
Author(s): Tamás Ferenci
Software Mentions: 2
Published: over 3 years ago
10.3389/fbioe.2021.677768
Rib Cortical Bone Fracture Risk as a Function of Age and Rib Strain: Updated Injury Prediction Using Finite Element Human Body Models
Cited by: 8
Author(s): Karl-Johan Larsson, Amanda Blennow, Johan Iraeus, Bengt Pipkorn, Nils Lübbe
Software Mentions: 2
Published: over 3 years ago
10.12688/wellcomeopenres.15849.3
COVID-19 – exploring the implications of long-term condition type and extent of multimorbidity on years of life lost: a modelling study
Cited by: 36
Author(s): Peter Hanlon, Fergus Chadwick, Anoop Shah, Rachael Wood, Jon Minton, Gerry McCartney, Colin Fischbacher, Frances S Mair, Dirk Husmeier, Jason Matthiopoulos, David McAllister
Software Mentions: 2
Published: over 3 years ago
10.1186/s13071-020-04276-y
Induction of long-lived potential aestivation states in laboratory An. gambiae mosquitoes
Cited by: 25
Author(s): Benjamin J Krajacich, Margery Sullivan, Roy Faiman, Laura Veru, Leland Graber, Tovi Lehmann
Software Mentions: 2
Published: over 4 years ago
10.1007/s40273-019-00853-x
How Uncertain is the Survival Extrapolation? A Study of the Impact of Different Parametric Survival Models on Extrapolated Uncertainty About Hazard Functions, Lifetime Mean Survival and Cost Effectiveness
Cited by: 24
Author(s): Benjamin Kearns, John Stevens, Shijie Ren, Alan Brennan
Software Mentions: 2
Published: almost 5 years ago
10.1177/0272989X20973201
Extrapolating Parametric Survival Models in Health Technology Assessment: A Simulation Study
Cited by: 20
Author(s): Daniel Gallacher, Peter K. Kimani, Nigel Stallard
Software Mentions: 2
Published: almost 4 years ago
10.1186/s12913-019-4678-9
Estimating the effectiveness and cost-effectiveness of establishing additional endovascular Thrombectomy stroke Centres in England: a discrete event simulation
Cited by: 11
Author(s): Peter McMeekin, Darren Flynn, Michael Allen, Diarmuid Coughlan, Gary A. Ford, Hannah Lumley, Joyce S. Balami, Martin James, Ken Stein, David Burgess, Phil White
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0047804
A Flexible Alternative to the Cox Proportional Hazards Model for Assessing the Prognostic Accuracy of Hospice Patient Survival
Cited by: 18
Author(s): Branko Miladinović, Amit Kumar, Rahul Mhaskar, Sehwan Kim, Ronald S. Schonwetter, Benjamin Djulbegović
Software Mentions: 1
Published: about 12 years ago
10.1186/s12879-021-06750-z
Risk factors associated with severe hospital burden of COVID-19 disease in Regione Lombardia: a cohort study
Cited by: 7
Author(s): Anne M. Presanis, Kevin Kunzmann, Francesca Grosso, Christopher Jackson, Alice Corbella, Giacomo Grasselli, Marco Salmoiraghi, Maria Gramegna, Daniela De Angelis, Danilo Cereda
Software Mentions: 1
Published: about 3 years ago
10.1186/s41512-018-0026-5
The current application of the Royston-Parmar model for prognostic modeling in health research: a scoping review
Cited by: 20
Author(s): Ryan Ng, Kathy Kornas, Rinku Sutradhar, Walter P. Wodchis, Laura Rosella
Software Mentions: 1
Published: almost 7 years ago
10.1186/s13613-020-00749-6
Biased and unbiased estimation of the average length of stay in intensive care units in the Covid-19 pandemic
Cited by: 20
Author(s): Nathanaël Lapidus, Xianlong Zhou, Fabrice Carrat, Bruno Riou, Yan Zhao, Gilles Hejblum
Software Mentions: 1
Published: about 4 years ago
10.1186/s12889-021-11669-w
Decreasing hospital burden of COVID-19 during the first wave in Regione Lombardia: an emergency measures context
Cited by: 12
Author(s): Francesca Grosso, Anne M. Presanis, Kevin Kunzmann, Chris Jackson, Alice Corbella, Giacomo Grasselli, Aida Andreassi, Annalisa Bodina, Maria Gramegna, Silvana Castaldi, Danilo Cereda, Daniela De Angelis, Ambra Castrofino, Gabriele Del Castillo, Lucia Crottogini, Marcello Tirani, Alberto Zanella, Marco Salmoiraghi
Software Mentions: 1
Published: about 3 years ago
10.1371/journal.pcbi.1007989
Dynamic interactions of influenza viruses in Hong Kong during 1998-2018
Cited by: 21
Author(s): Wan Yang, Eric H. Y. Lau, Benjamin J. Cowling
Software Mentions: 1
Published: over 4 years ago
10.1007/s10198-021-01303-2
Economic evaluation of orphan drug Lutetium-Octreotate vs. Octreotide long-acting release for patients with an advanced midgut neuroendocrine tumour in the Netherlands
Cited by: 0
Author(s): Marije Hagendijk, Simon van der Schans, Cornelis Boersma, Maarten J. Postma, S. Pol
Software Mentions: 1
Published: over 3 years ago