Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: factoextra

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/factoextra

Extract and Visualize the Results of Multivariate Data Analyses
5 versions
Latest release: over 4 years ago
39 dependent packages
67,486 downloads last month

Papers Mentioning factoextra 650

10.1371/journal.pone.0255838
Optimal distribution-preserving downsampling of large biomedical data sets (opdisDownsampling)
Cited by: 9
Author(s): Jörn Lötsch, Sebastian Malkusch, Alfred Ultsch
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0226616
Insights into fungal diversity of a shallow-water hydrothermal vent field at Kueishan Island, Taiwan by culture-based and metabarcoding analyses
Cited by: 25
Author(s): Ka−Lai Pang, Sheng−Yu Guo, I-An Chen, Gaëtan Burgaud, Zengwei Luo, Hans-Uwe Dahms, Jiang‐Shiou Hwang, Yi-Li Lin, Jian-Shun Huang, Tsz-Wai Ho, Ling Ming Tsang, Michael Chiang, Hyojung Cha
Software Mentions: 5
Published: almost 5 years ago
10.1371/journal.pone.0257949
Integrating additional factors into the TNM staging for cutaneous melanoma by machine learning
Cited by: 3
Author(s): Charles Yang, Huan Wang, Zhenqiu Liu, Matthew T. Hueman, Aadya Bhaskaran, Donald E. Henson, Li Sheng, Dechang Chen
Software Mentions: 5
Published: about 3 years ago
10.3389/fonc.2021.616576
LncRNA FENDRR in Carcinoma-Associated Fibroblasts Regulates the Angiogenesis of Oral Squamous Cell Carcinoma Through the PI3K/AKT Pathway
Cited by: 4
Author(s): Yuming Xu, Erhui Jiang, Zhang Shao, Zhengjun Shang
Software Mentions: 5
Published: over 3 years ago
10.1186/s12889-021-11760-2
Brazilian Longitudinal Study of Adult Health (ELSA-Brasil) participant’s profile regarding self-rated health: a multiple correspondence analysis
Cited by: 6
Author(s): Thaís Lopes de Oliveira, Raquel Vasconcellos Carvalhaes de Oliveira, Rosane Härter Griep, Arlinda B. Moreno, Maria da Conceição Chagas de Almeida, Ylva B. Almquist, Maria de Jesus Mendes da Fonseca
Software Mentions: 5
Published: about 3 years ago
10.1371/journal.pone.0228880
Spatio-temporal variation of Cerambycidae-host tree interaction networks
Cited by: 8
Author(s): Michelle Ramos‐Robles, Orthon Ricardo Vargas‐Cardoso, Angélica María Corona‐López, Alejandro Flores‐Palacios, Víctor Hugo Toledo‐Hernández
Software Mentions: 5
Published: almost 5 years ago
10.1371/journal.pone.0220692
Improving methodology in heart rate variability analysis for the premature infants: Impact of the time length
Cited by: 13
Author(s): Trang Nguyen Phuc Thu, Alfredo Hernández, Nathalie Costet, Hugues Patural, Vincent Pichot, Guy Carrault, Alain Beuchée
Software Mentions: 5
Published: over 5 years ago
10.1098/rsos.171532
Stable genetic structure and connectivity in pollution-adapted and nearby pollution-sensitive populations of<i>Fundulus heteroclitus</i>
Cited by: 1
Author(s): Joaquin C. B. Nunez, Leann M. Biancani, Patrick A. Flight, Diane Nacci, David M. Rand, Douglas L. Crawford, Marjorie F. Oleksiak
Software Mentions: 5
Published: over 6 years ago
10.3389/fonc.2021.745166
A Co-Expression Network Reveals the Potential Regulatory Mechanism of lncRNAs in Relapsed Hepatocellular Carcinoma
Cited by: 6
Author(s): Yuan Fang, Yang Yang, Xiaoli Zhang, Na Li, Bo Yuan, Li Jin, Sheng Bao, Mengge Li, Dan Zhao, Lingrui Li, Zhong Zeng, Hanfei Huang
Software Mentions: 5
Published: about 3 years ago
10.3390/ani10071164
Reproduction Indicators Related to Litter Size and Reproduction Cycle Length Among Sows of Breeds Considered Maternal and Paternal Components Kept on Medium-Size Farms
Cited by: 8
Author(s): Błażej Nowak, Anna Mucha, Magdalena Moska, Wojciech Kruszyński
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.ppat.1009313
Diverging patterns of introgression from Schistosoma bovis across S. haematobium African lineages
Cited by: 24
Author(s): Olivier Rey, Ève Toulza, Cristian Chaparro, Jean‐François Allienne, Julien Kincaid-Smith, Eglantine Mathieu‐Bégné, Fiona Allan, David Rollinson, Bonnie L. Webster, Jérôme Boissier
Software Mentions: 5
Published: almost 4 years ago
10.1038/s41598-017-08892-0
Development and assessment of a lysophospholipid-based deep learning model to discriminate geographical origins of white rice
Cited by: 14
Author(s): Nguyen Phuoc Long, Dong Kyu Lim, Changyeun Mo, Gi‐Young Kim, Sung Won Kwon
Software Mentions: 5
Published: over 7 years ago
10.7150/jca.50443
Six Novel Biomarkers for Diagnosis and Prognosis of Esophageal squamous cell carcinoma: validated by scRNA-seq and qPCR
Cited by: 24
Author(s): Liuhai Zheng, Linzhi Li, Jun Xie, Hai Jin, Nianyong Zhu
Software Mentions: 5
Published: almost 4 years ago
10.3390/jcm8010050
Efficacy of Integrating a Novel 16-Gene Biomarker Panel and Intelligence Classifiers for Differential Diagnosis of Rheumatoid Arthritis and Osteoarthritis
Cited by: 24
Author(s): Nguyen Phuoc Long, Seongoh Park, Nguyễn Hoàng Anh, Jung Eun Min, Sang Jun Yoon, Hyung Min Kim, Tran Diem Nghi, Dong Kyu Lim, Jeong Hill Park, Jong-Tae Lim, Sung Won Kwon
Software Mentions: 5
Published: almost 6 years ago
10.3389/fcell.2021.667852
Metabolic and Immunological Subtypes of Esophageal Cancer Reveal Potential Therapeutic Opportunities
Cited by: 8
Author(s): Ryan J. King, Fang Qiu, Fang Yu, Pankaj K. Singh
Software Mentions: 5
Published: over 3 years ago
10.1007/s13353-020-00569-1
Differential expression of lung adenocarcinoma transcriptome with signature of tobacco exposure
Cited by: 11
Author(s): Raneem Y Hammouz, Joanna Kostanek, Aleksandra Dudzisz, Piotr J Witas, Magdalena Orzechowska, Andrzej K. Bednarek
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pone.0248654
A comparative analysis of biogas production from tomato bio-waste in mesophilic batch and continuous anaerobic digestion systems
Cited by: 17
Author(s): Árpád Szilágyi, Attila Bodor, Norbert Tolvai, Kornél L. Kovács, László Bodai, Roland Wirth, Zoltán Bagi, Ágnes Szepesi, Viktória Markó, Balázs Kakuk, Naila Bounedjoum, Gábor Rákhely
Software Mentions: 5
Published: over 3 years ago
10.3389/fmicb.2021.661410
Short-Term Effect in Soil Microbial Community of Two Strategies of Recovering Degraded Area in Brazilian Savanna: A Pilot Case Study
Cited by: 1
Author(s): Priscila Jane Romano Gonçalves Selari, Luiz Ricardo Olchanheski, Almir José Ferreira, Tiago do Prado Paim, Guido Calgaro, Flávio Lopes Claudio, Estênio Moreira Alves, Darliane de Castro Santos, Welington Luiz Araújo, Fabiano Guimarães Silva
Software Mentions: 5
Published: over 3 years ago
10.1186/s12903-021-01587-z
A four-hypoxia-genes-based prognostic signature for oral squamous cell carcinoma
Cited by: 10
Author(s): Chenguang Zhao, Yingrui Zhou, Hongwei Ma, Jinhui Wang, Hongxu Guo, Hao Líu
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0201031
Salmonella spp. transmission in a vertically integrated poultry operation: Clustering and diversity analysis using phenotyping (serotyping, phage typing) and genotyping (MLVA)
Cited by: 18
Author(s): Helen Crabb, Joanne L. Allen, Joanne M. Devlin, Simon M. Firestone, C. R. Wilks, James R. Gilkerson
Software Mentions: 5
Published: over 6 years ago
10.3389/fcell.2021.655866
Proteomic Changes Associated With Sperm Fertilizing Ability in Meat-Type Roosters
Cited by: 4
Author(s): Anaïs Vitorino Carvalho, Laura Soler, Aurore Thélie, Isabelle Grasseau, Luiz Cordeiro, Daniel Tomas, Ana-Paula Teixeira-Gomes, Valérie Labas, Elisabeth Blesblois
Software Mentions: 5
Published: over 3 years ago
10.3389/fmicb.2019.02095
A Metabarcoding Analysis of the Mycobiome of Wheat Ears Across a Topographically Heterogeneous Field
Cited by: 13
Author(s): Gabriele Schiro, Pierluigi Colangeli, Marina Müller
Software Mentions: 5
Published: about 5 years ago
10.3390/ani10020356
Protection of Animals during Transport: Analysis of the Infringements Reported from 2009 to 2013 during On-Road Inspections in Italy
Cited by: 6
Author(s): Barbara Padalino, Roberta Barrasso, Daniele Tullio, Martina Zappaterra, Leonardo Nanni Costa, Giancarlo Bozzo
Software Mentions: 5
Published: over 4 years ago
10.3390/microorganisms9010006
Diversity and Colonization Strategies of Endolithic Cyanobacteria in the Cold Mountain Desert of Pamir
Cited by: 10
Author(s): Nataliia Khomutovska, Asunción de los Rı́os, Iwona Jasser
Software Mentions: 5
Published: almost 4 years ago
10.1371/journal.pone.0238924
Exploring the potential of comparative de novo transcriptomics to classify Saccharomyces brewing yeasts
Cited by: 1
Author(s): Jürgen Behr, Meike Kliche, Andreas Geißler, Rudi F. Vogel
Software Mentions: 5
Published: about 4 years ago
10.1371/journal.pone.0188842
Markers of epithelial-to-mesenchymal transition reflect tumor biology according to patient age and Gleason score in prostate cancer
Cited by: 31
Author(s): Dorota Jędroszka, Magdalena Orzechowska, R. Hamouz, Karolina Górniak, Andrzej K. Bednarek
Software Mentions: 5
Published: almost 7 years ago
10.3390/microorganisms8081122
Fecal Pollution Drives Antibiotic Resistance and Class 1 Integron Abundance in Aquatic Environments of the Bolivian Andes Impacted by Mining and Wastewater
Cited by: 18
Author(s): Jorge Agramont, Sergio Gutiérrez-Cortez, Enrique Joffré, Åsa Sjöling, Carla Calderon Toledo
Software Mentions: 5
Published: over 4 years ago
10.3389/fmicb.2020.01212
Diverse Microbial Composition of Sourdoughs From Different Origins
Cited by: 50
Author(s): Andrea Comasio, Marko Verce, Simon Van Kerrebroeck, Luc De Vuyst
Software Mentions: 5
Published: over 4 years ago
10.3390/insects11100706
Effectiveness and Selectiveness of Traps and Baits for Catching the Invasive Hornet Vespa velutina
Cited by: 18
Author(s): Simone Lioy, Daniela Laurino, Michela Capello, Andrea Romanò, Aulo Manino, Marco Porporato
Software Mentions: 5
Published: about 4 years ago
10.1371/journal.pone.0233077
Comparative transcriptomics of Diuraphis noxia and Schizaphis graminum fed wheat plants containing different aphid-resistance genes
Cited by: 2
Author(s): Lina Aguirre Rojas, Erin D. Scully, Laramy Enders, Alicia E. Timm, Deepak K. Sinha, C. Michael Smith
Software Mentions: 5
Published: over 4 years ago
10.1186/s40168-020-00969-9
Associations between habitual diet, metabolic disease, and the gut microbiota using latent Dirichlet allocation
Cited by: 39
Author(s): Taylor A. Breuninger, Nina Wawro, Jakob Breuninger, Sandra Reitmeier, Thomas Clavel, Julia Six-Merker, Giulia Pestoni, Sabine Rohrmann, Wolfgang Rathmann, Annette Peters, Harald Grallert, Christa Meisinger, Dirk Haller, Jakob Linseisen
Software Mentions: 5
Published: over 3 years ago
10.1172/jci.insight.148694
Natural mucosal barriers and COVID-19 in children
Cited by: 113
Author(s): Carl A. Pierce, Sharlene Sy, Benjamin T. Galen, D. Yitzchak Goldstein, Erika P. Orner, Marla J. Keller, Kevan C. Herold, Betsy C. Herold
Software Mentions: 5
Published: over 3 years ago
10.1186/s40168-020-00823-y
Most dominant roles of insect gut bacteria: digestion, detoxification, or essential nutrient provision?
Cited by: 128
Author(s): Tianzhong Jing, Fenghui Qi, Zhiying Wang
Software Mentions: 5
Published: over 4 years ago
10.1186/s12864-021-07724-w
Transcriptomic and metabolomic characterization of post-hatch metabolic reprogramming during hepatic development in the chicken
Cited by: 4
Author(s): Heidi A. Van Every, Carl J. Schmidt
Software Mentions: 5
Published: over 3 years ago
10.3390/ijms22073735
Interplay between Histone and DNA Methylation Seen through Comparative Methylomes in Rare Mendelian Disorders
Cited by: 6
Author(s): Guillaume Velasco, Damien Ulveling, Sophie Rondeau, Pauline Marzin, Motoko Unoki, Valérie Cormier‐Daire, Claire Francastel
Software Mentions: 5
Published: over 3 years ago
10.1186/s13059-018-1602-2
RNA G-quadruplexes at upstream open reading frames cause DHX36- and DHX9-dependent translation of human mRNAs
Cited by: 107
Author(s): Pierre Murat, Giovanni Marsico, Barbara Herdy, Avazeh T. Ghanbarian, Guillem Portella, Shankar Balasubramanian
Software Mentions: 5
Published: almost 6 years ago
10.3390/ani9100733
Virulence Genes, Shiga Toxin Subtypes, Serogroups, and Clonal Relationship of Shiga Toxin-Producing Escherichia Coli Strains Isolated from Livestock and Companion Animals
Cited by: 15
Author(s): Nicolás Galarce, Beatriz Escobar, Francisco Javier Sierro Sánchez, Esteban Paredes-Osses, Raúl Alegría-Morán, César Borie
Software Mentions: 5
Published: about 5 years ago
10.3390/plants10061043
Genotypic Variability on Grain Yield and Grain Nutritional Quality Characteristics of Wheat Grown under Elevated CO2 and High Temperature
Cited by: 9
Author(s): Emilio L. Marcos-Barbero, Pilar Pérez Pérez, Rafael Martínez‐Carrasco, Juan B. Arellano, Rosa Morcuende
Software Mentions: 5
Published: over 3 years ago
10.3390/ijerph13111091
Arsenic and Heavy Metal Contamination in Soils under Different Land Use in an Estuary in Northern Vietnam
Cited by: 31
Author(s): Thinh Nguyen Van, Akinori Ozaki, Hoang Nguyen Tho, Anh Nguyen Duc, Yen Tran Thi, Kiyoshi Kurosawa
Software Mentions: 5
Published: about 8 years ago
10.3390/metabo11010020
Identifying Personalized Metabolic Signatures in Breast Cancer
Cited by: 8
Author(s): Priyanka Baloni, Wikum Dinalankara, John C. Earls, Theo Knijnenburg, Donald Geman, Luigi Marchionni, Nathan D. Price
Software Mentions: 5
Published: almost 4 years ago
10.1186/s12864-019-5561-0
In silico analysis of fungal small RNA accumulation reveals putative plant mRNA targets in the symbiosis between an arbuscular mycorrhizal fungus and its host plant
Cited by: 42
Author(s): Alessandro Silvestri, Valentina Fiorilli, Laura Miozzi, G. P. Accotto, Massimo Turina, Luisa Lanfranco
Software Mentions: 5
Published: over 5 years ago
10.2196/16077
Personalized Web-Based Cognitive Rehabilitation Treatments for Patients with Traumatic Brain Injury: Cluster Analysis
Cited by: 11
Author(s): Alejandro García-Rudolph, Alberto García-Molina, Eloy Opisso, Jose Maria Tormos Muñoz
Software Mentions: 5
Published: about 4 years ago
10.1186/s13046-021-02031-4
Elesclomol-induced increase of mitochondrial reactive oxygen species impairs glioblastoma stem-like cell survival and tumor growth
Cited by: 35
Author(s): Mariachiara Buccarelli, Quintino Giorgio D’Alessandris, Paola Matarrese, Cristiana Mollinari, Michele Signore, Andrea Cappannini, Maurizio Martini, Pierluigi D’Aliberti, Gabriele De Luca, Francesca Pedini, Alessandra Boe, Mauro Biffoni, Roberto Pallini, Lucia Ricci‐Vitiani
Software Mentions: 5
Published: over 3 years ago
10.3390/metabo11090626
Metabolic Reprogramming of Mammary Epithelial Cells during TGF-β-Induced Epithelial-to-Mesenchymal Transition
Cited by: 5
Author(s): Hua Wang, Sarantos Kostidis, Oleg A. Mayboroda, Martin Giera, Marten Hornsveld, Peter ten Dijke
Software Mentions: 5
Published: about 3 years ago
10.1186/s13007-019-0444-6
Combining self-organizing maps and biplot analysis to preselect maize phenotypic components based on UAV high-throughput phenotyping platform
Cited by: 6
Author(s): Huagen Liang, Guijun Yang, Huayang Dai, Hao Yang, Bo Xu, Heli Li, Long Huang, Zhenhai Li, Xiaodong Yang, Chunjiang Zhao
Software Mentions: 5
Published: over 5 years ago
10.7717/peerj.11836
Potential oxygen consumption and community composition of sediment bacteria in a seasonally hypoxic enclosed bay
Cited by: 4
Author(s): Fumiaki Mori, Yu Umezawa, Ryou Kondo, Gregory N. Nishihara, Mitsuru Wada
Software Mentions: 5
Published: over 3 years ago
10.1534/g3.119.400968
Multi-trait Genomic Prediction Model Increased the Predictive Ability for Agronomic and Malting Quality Traits in Barley (<i>Hordeum vulgare</i> L.)
Cited by: 54
Author(s): Madhav Bhatta, Lucı́a Gutiérrez, Lorena Cammarota, Fernanda Cardozo, Silvia Germán, Blanca Gómez-Guerrero, María Fernanda Pardo, Valeria Lanaro, Mercedes Sayas, Ariel J. Castro
Software Mentions: 5
Published: over 4 years ago
10.3389/fimmu.2019.01629
Sonic Hedgehog Is a Determinant of γδ T-Cell Differentiation in the Thymus
Cited by: 12
Author(s): Konstantinos Mengrelis, Ching‐In Lau, Jasmine Rowell, Anisha Solanki, S. Norris, Scott R. Ross, M. Ono, Susan V. Outram, Tessa Crompton
Software Mentions: 5
Published: over 5 years ago
10.3389/fpsyg.2021.667173
Dimensions and Clusters of Aesthetic Emotions: A Semantic Profile Analysis
Cited by: 4
Author(s): Ursula Beermann, Georg Hosoya, Ines Schindler, Klaus R. Scherer, Michael Eid, Valentin Wagner, Winfried Menninghaus
Software Mentions: 5
Published: over 3 years ago
10.1186/s12885-020-07473-1
A gene-based survival score for lung adenocarcinoma by multiple transcriptional datasets analysis
Cited by: 4
Author(s): Yanlu Xiong, Jie Lei, Jinbo Zhao, Qiang Lü, Yangbo Feng, Tianyun Qiao, Shaowei Xin, Han Ye, Tao Jiang
Software Mentions: 5
Published: about 4 years ago
10.1038/s41598-021-96633-9
Spatio-seasonal variation of water quality influenced by land use and land cover in Lake Muhazi
Cited by: 15
Author(s): Edovia Dufatanye Umwali, Alishir Kurban, Alain Isabwe, Richard Mind’je, Hossein Azadi, Zengkun Guo, Madeleine Udahogora, Anathalie Nyirarwasa, Jeanine Umuhoza, Vincent Nzabarinda, Aboubakar Gasirabo, Gulnur Sabirhazi
Software Mentions: 5
Published: about 3 years ago
10.1007/s00122-021-03828-9
Genome-wide association mapping of sodium and potassium concentration in rice grains and shoots under alternate wetting and drying and continuously flooded irrigation
Cited by: 6
Author(s): Caijin Chen, Anthony J. Travis, Mahmud Hossain, Rafiqul Islam, Adam H. Price, Gareth J. Norton
Software Mentions: 5
Published: over 3 years ago
10.3389/fimmu.2021.639965
Inflammatory Determinants of Differential Tuberculosis Risk in Pre-Adolescent Children and Young Adults
Cited by: 7
Author(s): Richard Baguma, Stanley Kimbung Mbandi, Miguel Rodo, Mzwandile Erasmus, Jonathan Day, Lebohang Makhethe, Marwou de Kock, Michele van Rooyen, Lynnett Stone, Nicole Bilek, Marcia Steyn, Hadn Africa, Fatoumatta Darboe, Novel N. Chegou, Gerard Tromp, Gerhard Walzl, Mark Hatherill, Adam Penn-Nicholson, Thomas J. Scriba
Software Mentions: 5
Published: over 3 years ago
10.3389/fimmu.2020.575488
Integrated Analysis of Transcriptome and Secretome From Umbilical Cord Mesenchymal Stromal Cells Reveal New Mechanisms for the Modulation of Inflammation and Immune Activation
Cited by: 18
Author(s): Mónica Cruz-Barrera, Nathalia Flórez-Zapata, Nicolás Lemus-Diaz, Carlos O. Medina, Cristian Camilo Galindo, Lorena-Xiomara González-Acero, Luz Correa, Bernardo Camacho, Jens Gruber, Gustavo Salguero
Software Mentions: 5
Published: about 4 years ago
10.1038/s41598-021-96378-5
Biogeography of acoustic biodiversity of NW Mediterranean coralligenous reefs
Cited by: 13
Author(s): Lucia Di Iorio, Manon Audax, Julie Déter, Florian Holon, Julie Lossent, Cédric Gervaise, Pierre Boissery
Software Mentions: 5
Published: over 3 years ago
10.1002/ece3.6273
Cones structure and seed traits of four species of large‐seeded pines: Adaptation to animal‐mediated dispersal
Cited by: 1
Author(s): Manyu Zhang, Chang-Xiang Su, Changhu Lu
Software Mentions: 5
Published: over 4 years ago
10.3390/v13061172
Comprehensive Evolutionary Analysis of Complete Epstein–Barr Virus Genomes from Argentina and Other Geographies
Cited by: 7
Author(s): Ana Catalina Blazquez, Ariel Berenstein, Carolina Torres, Agustín Izquierdo, Carol Lezama, Guillermo Moscatelli, Elena Noemí de Matteo, Mario Alejandro Lorenzetti, María Victoria Preciado
Software Mentions: 5
Published: over 3 years ago
10.3389/fpls.2021.636652
Non-target Site Herbicide Resistance Is Conferred by Two Distinct Mechanisms in Black-Grass (Alopecurus myosuroides)
Cited by: 25
Author(s): S. Franco Ortega, Alina Goldberg-Cavalleri, Andrew Walker, Melissa Brazier‐Hicks, Nawaporn Onkokesung, Robert Edwards
Software Mentions: 5
Published: over 3 years ago
10.1038/s41598-020-77284-8
Lung squamous cell carcinoma and lung adenocarcinoma differential gene expression regulation through pathways of Notch, Hedgehog, Wnt, and ErbB signalling
Cited by: 34
Author(s): Dorota Anusewicz, Magdalena Orzechowska, Andrzej K. Bednarek
Software Mentions: 5
Published: almost 4 years ago
10.3389/fimmu.2021.614246
Reduced Placental Transfer of Antibodies Against a Wide Range of Microbial and Vaccine Antigens in HIV-Infected Women in Mozambique
Cited by: 10
Author(s): Selena Alonso, Marta Vidal, Gemma Ruiz‐Olalla, Raquel González, Maria Nélia Manaca, Chenjerai Jairoce, Miquel Vázquez-Santiago, Reyes Balcells, Anifa Valá, Maria Rosario, Pau Cisteró, Laura Fuente-Soro, Marta Cova, Evelina Angov, Arsénio Nhacolo, Esperança Sevene, John J. Aponte, Eusébio Macete, Ruth Aguilar, Alfredo Mayor, Clara Menéndez, Carlota Dobaño, Gemma Moncunill
Software Mentions: 5
Published: over 3 years ago
10.3389/fpls.2019.00511
Activity in the Arbuscular Mycorrhizal Hyphosphere Warning Neighbouring Plants
Cited by: 8
Author(s): Carmina Cabral, Bernd Wollenweber, Carla António, Sabine Ravnskov
Software Mentions: 5
Published: over 5 years ago
10.1007/s00125-021-05485-5
Comparison between data-driven clusters and models based on clinical features to predict outcomes in type 2 diabetes: nationwide observational study
Cited by: 15
Author(s): Moa Lugner, Soffia Guðbjörnsdóttir, Naveed Sattar, Ann‐Marie Svensson, Mervete Miftaraj, Katarina Eeg‐Olofsson, Björn Eliasson, Stefan Franzén
Software Mentions: 5
Published: over 3 years ago
10.1038/s41598-020-72511-8
Burn resuscitation strategy influences the gut microbiota-liver axis in swine
Cited by: 11
Author(s): Wayne Muraoka, Jose C. Granados, Belinda I. Gómez, Susannah E. Nicholson, Kevin K. Chung, Jeffrey W. Shupp, James A. Bynum, Michael A. Dubick, David M. Burmeister
Software Mentions: 5
Published: about 4 years ago
10.3389/fgene.2020.560546
Identification of Driver Genes Regulating the T-Cell–Infiltrating Levels in Hepatocellular Carcinoma
Cited by: 3
Author(s): Yi Cai, Ying Tian, Jianchu Wang, Wei Wang, Qianli Tang, Libai Lu, Zongjiang Luo, Wenchuan Li, Yuan Lü, Jian Pu, Zhengxia Yang
Software Mentions: 5
Published: almost 4 years ago
10.1038/s41598-020-66599-1
Metabolic reprogramming related to whole-chromosome instability in models for Hürthle cell carcinoma
Cited by: 8
Author(s): Ruben D. Addie, Sarantos Kostidis, Willem E. Corver, Jan Oosting, Sepideh Aminzadeh-Gohari, René G. Feichtinger, Barbara Kofler, Mehtap Derya Aydemirli, Martin Giera, Hans Morreau
Software Mentions: 5
Published: over 4 years ago
10.1016/j.jcmgh.2021.06.004
Impaired Luminal Control of Intestinal Macrophage Maturation in Patients With Ulcerative Colitis During Remission
Cited by: 7
Author(s): Lujain Maasfeh, Anetta Härtlová, Stefan Isaksson, Johanna Sundin, Georgios Mavroudis, Otto Savolainen, Hans Strid, Lena Öhman, Maria K. Magnusson
Software Mentions: 5
Published: almost 4 years ago
10.1038/s41598-020-67782-0
Elongating maize root: zone-specific combinations of polysaccharides from type I and type II primary cell walls
Cited by: 27
Author(s): Liudmila Kozlova, Alsu Nazipova, Oleg Gorshkov, Anna A. Petrova, Т. А. Горшкова
Software Mentions: 5
Published: over 4 years ago
10.3389/fonc.2020.567931
A Ten-N6-Methyladenosine (m6A)-Modified Gene Signature Based on a Risk Score System Predicts Patient Prognosis in Rectum Adenocarcinoma
Cited by: 10
Author(s): Wei Huang, Gen Li, Zihang Wang, Lin Zhou, Xin Yin, Tianshu Yang, Pei Wang, Xu Teng, Yajuan Feng, Hefen Yu
Software Mentions: 4
Published: almost 4 years ago
10.1007/s00395-021-00862-y
Fibroblast GATA-4 and GATA-6 promote myocardial adaptation to pressure overload by enhancing cardiac angiogenesis
Cited by: 29
Author(s): Gesine M. Dittrich, Natali Froese, Xue Wang, Hannah Kröger, Honghui Wang, Malgorzata Szaroszyk, Mona Malek Mohammadi, Julio Cordero, Merve Keles, Mortimer Korf‐Klingebiel, Kai C. Wollert, Robert Geffers, Manuel Mayr, Simon J. Conway, Gergana Dobreva, Johann Bauersachs, Joerg Heineke
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-018-32670-1
Aphid infestation in the phyllosphere affects primary metabolic profiles in the arbuscular mycorrhizal hyphosphere
Cited by: 10
Author(s): Carmina Cabral, Bernd Wollenweber, Carla António, Ana Margarida Rodrigues, Sabine Ravnskov
Software Mentions: 4
Published: about 6 years ago
10.3389/fonc.2020.01549
Inference of Subpathway Activity Profiles Reveals Metabolism Abnormal Subpathway Regions in Glioblastoma Multiforme
Cited by: 0
Author(s): Xudong Han, Donghua Wang, Ping Zhao, Chonghui Liu, Yilong Hao, Lulu Chang, Jian Zhao, Wei Zhao, Lili Mu, Jinghua Wang, Hulun Li, Qingfei Kong, Junwei Han
Software Mentions: 4
Published: about 4 years ago
10.3389/fcell.2021.648925
Multi-Factor Clustering Incorporating Cell Motility Predicts T Cell Expansion Potential
Cited by: 1
Author(s): Joanne H. Lee, Shuai Shao, Michelle Kim, Stacey M. Fernandes, Jennifer R. Brown, Lance C. Kam
Software Mentions: 4
Published: over 3 years ago
10.3390/molecules24213942
A Chemometric Analysis of Deep-Sea Natural Products
Cited by: 16
Author(s): Lisa I. Pilkington
Software Mentions: 4
Published: about 5 years ago
10.1038/s41598-018-29932-3
Poultry and beef meat as potential seedbeds for antimicrobial resistant enterotoxigenic Bacillus species: a materializing epidemiological and potential severe health hazard
Cited by: 24
Author(s): Kamelia M. Osman, Anthony D. Kappell, Ahmed Orabi, Khalid S. Almaary, Ayman Mubarak, Turki M. Dawoud, Hassan A. Hemeg, Ihab M. Moussa, Ashgan M. Hessain, Hend M. Y. Yousef, Krassimira R. Hristova
Software Mentions: 4
Published: over 6 years ago
10.1038/s41598-019-42190-1
Changes in the Canine Plasma Lipidome after Short- and Long-Term Excess Glucocorticoid Exposure
Cited by: 15
Author(s): Nadja S Sieber-Ruckstuhl, Bo Burla, Susanne Spoerel, Florence Daniela Schmid, Claudio Venzin, Amaury Cazenave-Gassiot, Anne K. Bendt, Federico Torta, Markus R. Wenk, Felicitas S Boretti
Software Mentions: 4
Published: over 5 years ago
10.1186/s12284-020-00404-5
Phenotyping Root Systems in a Set of Japonica Rice Accessions: Can Structural Traits Predict the Response to Drought?
Cited by: 15
Author(s): P. H. R. Guimarães, Isabela Pereira de Lima, Adriano Pereira de Castro, Anna Cristina Lanna, P. G. S. Melo, Marcel De Raı̈ssac
Software Mentions: 4
Published: about 4 years ago
10.3389/fneur.2020.575953
Cerebrovascular Senescence Is Associated With Tau Pathology in Alzheimer's Disease
Cited by: 39
Author(s): Annie Bryant, Miwei Hu, Becky C. Carlyle, Steven E. Arnold, Matthew P. Frosch, Sudeshna Das, Bradley T. Hyman, Rachel E. Bennett
Software Mentions: 4
Published: about 4 years ago
10.3390/molecules24193629
Level of Biogenic Amines in Red and White Wines, Dietary Exposure, and Histamine-Mediated Symptoms upon Wine Ingestion
Cited by: 27
Author(s): Francesco Esposito, Paolo Montuori, M. Schettino, Salvatore Velotto, Tommaso Stasi, Raffaele Romano, Teresa Cirillo
Software Mentions: 4
Published: about 5 years ago
10.1371/journal.pone.0219980
Identification of pathological RA endotypes using blood-based biomarkers reflecting tissue metabolism. A retrospective and explorative analysis of two phase III RA studies
Cited by: 10
Author(s): Joseph Blair, Cecilie L. Bager, Adam Platt, Morten A. Karsdal, Anne‐Christine Bay‐Jensen
Software Mentions: 4
Published: over 5 years ago
10.1186/s12870-020-2268-y
Modulation of volatile compound metabolome and transcriptome in grape berries exposed to sunlight under dry-hot climate
Cited by: 24
Author(s): Lei He, Xiaoqing Xu, Yu Wang, Wei-Kai Chen, Ruonan Sun, Guodong Cheng, Bin Liu, Changyong Wu, Chang‐Qing Duan, Jun Wang, Qiu-Hong Pan
Software Mentions: 4
Published: almost 5 years ago
10.3389/fcimb.2017.00235
In vitro Increased Respiratory Activity of Selected Oral Bacteria May Explain Competitive and Collaborative Interactions in the Oral Microbiome
Cited by: 9
Author(s): Emma Hernandez-Sanabria, Vera Slomka, Esteban Rodríguez Herrero, Frederiek‐Maarten Kerckhof, Lynette Zaidel, Wim Teughels, Nico Boon
Software Mentions: 4
Published: over 7 years ago
10.1371/journal.pone.0230071
The microbiome of modern microbialites in Bacalar Lagoon, Mexico
Cited by: 15
Author(s): Alfredo Yanez-Montalvo, Selene Gómez-Acata, Bernardo Águila, Héctor A. Hernández‐Arana, Luisa I. Falcón
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.ppat.1009697
Listeria monocytogenes infection rewires host metabolism with regulatory input from type I interferons
Cited by: 3
Author(s): Duygu Demiröz, Ekaterini Platanitis, Marsha Bryant, Philipp Fischer, Michaela Prchal-Murphy, Alexander Lercher, Caroline Lassnig, Manuela Baccarini, Mathias Müller, Andréas Bergthaler, Veronika Sexl, Marlies Dolezal, Thomas Decker
Software Mentions: 4
Published: over 3 years ago
10.1093/aobpla/plaa047
Difference between emergent aquatic and terrestrial monocotyledonous herbs in relation to the coordination of leaf stomata with vein traits
Cited by: 6
Author(s): Wanli Zhao, Pei‐Li Fu, Guolan Liu, Ping Zhao
Software Mentions: 4
Published: about 4 years ago
10.3389/fmicb.2018.02494
Altered Gut Microbiota and Compositional Changes in Firmicutes and Proteobacteria in Mexican Undernourished and Obese Children
Cited by: 90
Author(s): Eder Orlando Méndez-Salazar, Marı́a Guadalupe Ortiz-López, Marı́a de los Ángeles Granados-Silvestre, Berenice Palacios‐González, Mészáros Márta
Software Mentions: 4
Published: about 6 years ago
10.1038/s41598-019-42570-7
Stage-specific transcriptome of Bursaphelenchus xylophilus reveals temporal regulation of effector genes and roles of the dauer-like stages in the lifecycle
Cited by: 22
Author(s): Shino Tanaka, Mehmet Dayı, Y. Maeda, Isheng Jason Tsai, Ryusei Tanaka, Mark W. Bligh, Yuko Takeuchi-Kaneko, Kenji Fukuda, Natsumi Kanzaki, Taisei Kikuchi
Software Mentions: 4
Published: over 5 years ago
10.1371/journal.pone.0242354
Characterization of commercial poultry farms in Mexico: Towards a better understanding of biosecurity practices and antibiotic usage patterns
Cited by: 6
Author(s): Erika Ornelas-Eusebio, Gary Garcı́a-Espinosa, Karine Laroucau, Gina Zanella
Software Mentions: 4
Published: almost 4 years ago
10.1186/s12887-020-02272-w
Breastfeeding patterns in cohort infants at a high-risk fetal, neonatal and child referral center in Brazil: a correspondence analysis
Cited by: 4
Author(s): Maíra Domingues Bernardes Silva, Raquel de Vasconcellos Carvalhaes de Oliveira, José Ueleres Braga, João Aprígio Guerra de Almeida, Enirtes Caetano Prates Melo
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pone.0212359
Rosellinia necatrix infection induces differential gene expression between tolerant and susceptible avocado rootstocks
Cited by: 16
Author(s): Adela Zumaquero, Elsa Martínez-Ferri, Antonio J. Matas, Bianca Reeksting, Nicholas Abraham Olivier, Fernando Pliego‐Alfaro, Araceli Barceló, Noëlani van den Berg, Clara Pliego
Software Mentions: 4
Published: almost 6 years ago
10.1186/s12866-020-02026-9
A longitudinal study on morpho-genetic diversity of pathogenic Rhizoctonia solani from sugar beet and dry beans of western Nebraska
Cited by: 4
Author(s): Saurav Das, T. Plyler-Harveson, Dipak K. Santra, Bijesh Maharjan, Kathy A. Nielson, Robert M. Harveson
Software Mentions: 4
Published: about 4 years ago
10.3389/fmicb.2021.619112
Impact of Processed Food (Canteen and Oil Wastes) on the Development of Black Soldier Fly (Hermetia illucens) Larvae and Their Gut Microbiome Functions
Cited by: 31
Author(s): Thomas Klammsteiner, Andreas Walter, Tajda Bogataj, Carina Desirée Heussler, Blaž Stres, Florian M. Steiner, Birgit C. Schlick‐Steiner, Heribert Insam
Software Mentions: 4
Published: almost 4 years ago
10.1111/1365-2656.13293
Urbanization can increase the invasive potential of alien species
Cited by: 31
Author(s): Piatã Santana Marques, Luisa Resende Manna, Therese C. Frauendorf, Eugênia Zandonà, Rosana Mazzoni, Rana W. El‐Sabaawi
Software Mentions: 4
Published: over 4 years ago
10.1371/journal.pone.0239827
Impact of a candidate vaccine on the dynamics of salmon lice (Lepeophtheirus salmonis) infestation and immune response in Atlantic salmon (Salmo salar L.)
Cited by: 16
Author(s): Jaya Kumari Swain, Yamila Carpio, Lill-Heidi Johansen, Janet Velázquez, Liz Hernández, Yeny Leal, Ajey Kumar, Mario Pablo Estrada
Software Mentions: 4
Published: about 4 years ago
10.1371/journal.pone.0212577
Developmental fluoxetine exposure in zebrafish reduces offspring basal cortisol concentration via life stage-dependent maternal transmission
Cited by: 15
Author(s): Rubén Martínez, Marilyn N. Vera-Chang, Majd Haddad, J.B.A. van Zon, Laia Navarro‐Martín, Vance L. Trudeau, Jan A. Mennigen
Software Mentions: 4
Published: over 5 years ago
10.3389/fmicb.2021.684903
Periphytic Biofilm Formation on Natural and Artificial Substrates: Comparison of Microbial Compositions, Interactions, and Functions
Cited by: 15
Author(s): Lingzhan Miao, Chengqian Wang, Tanveer M. Adyel, Jiaqi Zhao, Ning Yan, Jun Wu, Jun Hou
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0206361
Genetic diversity assessed by genotyping by sequencing (GBS) and for phenological traits in blueberry cultivars
Cited by: 19
Author(s): Ana Čampa, Juan José Ferreira Fernández
Software Mentions: 4
Published: about 6 years ago
10.3389/fcell.2021.568660
Transcriptional Repression of MFG-E8 Causes Disturbance in the Homeostasis of Cell Cycle Through DOCK/ZP4/STAT Signaling in Buffalo Mammary Epithelial Cells
Cited by: 5
Author(s): Arvind Verma, Syed Azmal Ali, Parul Singh, Sanjay Kumar, Ashok Kumar Mohanty
Software Mentions: 4
Published: over 3 years ago
10.1038/hortres.2016.45
Comparative analysis of Cucurbita pepo metabolism throughout fruit development in acorn squash and oilseed pumpkin
Cited by: 19
Author(s): Lindsay E. Wyatt, Susan R. Strickler, Lukas A. Mueller, Michael Mazourek
Software Mentions: 4
Published: about 8 years ago
10.1371/journal.pgen.1007216
The INO80 chromatin remodeler sustains metabolic stability by promoting TOR signaling and regulating histone acetylation
Cited by: 20
Author(s): Sean L. Beckwith, Erich Schwartz, Pablo E. García-Nieto, D. A. King, Graeme J. Gowans, Ka Man Wong, Tessa L. Eckley, Alexander P. Paraschuk, Egan Peltan, Laura R. Lee, Wei Yao, Ashby J. Morrison
Software Mentions: 4
Published: almost 7 years ago
10.1371/journal.pgen.1009448
Recent loss of the Dim2 DNA methyltransferase decreases mutation rate in repeats and changes evolutionary trajectory in a fungal pathogen
Cited by: 27
Author(s): Mareike Möller, Michael Habig, Cécile Lorrain, Alice Feurtey, Janine Haueisen, Wagner C. Fagundes, A. Alizadeh, Michael Freitag, Eva H. Stukenbrock
Software Mentions: 4
Published: over 3 years ago