Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: epiR

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/epiR

Tools for the Analysis of Epidemiological Data
82 versions
Latest release: about 1 year ago
13 dependent packages
12,529 downloads last month

Papers Mentioning epiR 199

10.1111/irv.12345
Elevated transmission of upper respiratory illness among new recruits in military barracks in Thailand
Cited by: 10
Author(s): Jens Levy, Piraya Bhoomiboonchoo, Sriluck Simasathien, Henrik Salje, Angkana T. Huang, Ram Rangsin, Richard G. Jarman, Stefan Fernandez, Chonticha Klungthong, Kittinun Hussem, Robert V. Gibbons, In Kyu Yoon
Software Mentions: 2
Published: about 9 years ago
10.3390/insects11010028
Influence of Forest Disturbance on La Crosse Virus Risk in Southwestern Virginia
Cited by: 8
Author(s): M. Camille Hopkins, Steven D. Zink, Sally L. Paulson, Dana M. Hawley
Software Mentions: 2
Published: almost 5 years ago
10.1002/mnfr.201700537
Response of Red Blood Cell Folate to Supplementation in Nonpregnant Women is Predictable: A Proposal for Personalized Supplementation
Cited by: 2
Author(s): Rima Obeid, Christiane Schön, Manfred Wilhelm, Rajiv P. Shrestha, Stefan Pilz, Klaus Pietrzik
Software Mentions: 2
Published: almost 7 years ago
10.3390/v11070649
Evaluation of an Immunochromatographic Assay as a Canine Rabies Surveillance Tool in Goa, India
Cited by: 19
Author(s): Gowri Yale, Andrew D Gibson, Reeta Subramaniam Mani, Pulleri Kandi Harsha, Niceta Cunha Costa, Julie Corfmat, Ilona Otter, Nigel Otter, Ian Handel, Barend Mark de Clare Bronsvoort, Richard J. Mellanby, Santosh Desai, Vilas Naik, Luke Gamble, Stella Mazeri
Software Mentions: 2
Published: over 5 years ago
10.1186/s12889-016-2846-y
Midlife work ability and mobility limitation in old age among non-disability and disability retirees - a prospective study
Cited by: 15
Author(s): Monika E. von Bonsdorff, Taina Rantanen, Timo Törmäkangas, Jenni Kulmala, Timo Hinrichs, Jorma Seitsamo, Clas‐Håkan Nygård, Juhani Ilmarinen, Mikaela B. von Bonsdorff
Software Mentions: 2
Published: almost 9 years ago
10.1038/s41598-019-43634-4
Temporal escalation of Pyrethroid Resistance in the major malaria vector Anopheles coluzzii from Sahelo-Sudanian Region of northern Nigeria
Cited by: 19
Author(s): Sulaiman S. Ibrahim, Muhammad Mahmood Mukhtar, Jamila A. Datti, Helen Irving, Michael O. Kusimo, Williams Tchapga, Lawal Nura, Fatima I. Sambo, Charles S. Wondji
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-021-84594-y
Performance of the hematology analyzer XN-31 prototype in the detection of Plasmodium infections in an endemic region of Colombia
Cited by: 7
Author(s): Lina Zuluaga-Idárraga, Alexandra Ríos, Verónica Sierra-Cifuentes, Edwar Garzón, Alberto Tobón-Castaño, Ikki Takehara, Yuji Toya, Munehisa Izuka, Kinya Uchihashi, Tatiana M. Lopera-Mesa
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-021-87103-3
Functional traits linked to pathogen prevalence in wild bee communities
Cited by: 4
Author(s): Laura L. Figueroa, Sally Compton, Heather Grab, Scott H. McArt
Software Mentions: 2
Published: over 3 years ago
10.1186/1745-6215-14-253
Effect of periodontal treatment on the clinical parameters of patients with rheumatoid arthritis: study protocol of the randomized, controlled ESPERA trial
Cited by: 33
Author(s): Paul Monsarrat, Jean-Noël Vergnes, Alain Cantagrel, Nadège Algans, Sarah Cousty, Philippe Kémoun, Caroline Bertrand, Élise Arrivé, Christophe Bou, Cyril Sédarat, Thierry Schaeverbeke, Cathy Nabet, Michel Sixou
Software Mentions: 2
Published: almost 12 years ago
10.5588/ijtld.17.0492
Accuracy of an automated system for tuberculosis detection on chest radiographs in high-risk screening
Cited by: 21
Author(s): Jaime Melendez, Laurens Hogeweg, Clara I. Sánchez, Rick H. H. M. Philipsen, Robert W Aldridge, Andrew Hayward, Ibrahim Abubakar, Bram van Ginneken, Alistair Story
Software Mentions: 2
Published: over 6 years ago
10.3390/ijerph17051726
Utility of Human Papillomavirus Testing for Cervical Cancer Screening in Korea
Cited by: 4
Author(s): Mee-Seon Kim, Eun Hee Lee, Moon-il Park, Jae Seok Lee, Ki-Su Kim, Mee Sook Roh, Hyoun Wook Lee
Software Mentions: 2
Published: over 4 years ago
10.1002/jia2.25501
Drug level testing as a strategy to determine eligibility for drug resistance testing after failure of ART: a retrospective analysis of South African adult patients on second‐line ART
Cited by: 12
Author(s): Lucas E Hermans, Kim Steegen, Rob ter Heine, Rob Schuurman, Hugo Tempelman, Robert Moraba, Erik van Maarseveen, Monique Nijhuis, Taryn Pillay, Derryn Audrey Legg-E'Silva, Tracy Snyman, Jonathan Schapiro, David M. Burger, Sergio Carmona, Annemarie M. J. Wensing
Software Mentions: 2
Published: over 4 years ago
10.18632/oncotarget.20451
Immunohistochemistry cannot replace DNA analysis for evaluation of<i>BRAF</i>V600E mutations in papillary thyroid carcinoma
Cited by: 15
Author(s): Monika Szymonek, Artur Kowalik, Janusz Kopczyński, Danuta Gąsior-Perczak, Iwona Pałyga, Agnieszka Walczyk, Klaudia Gadawska-Juszczyk, Agnieszka Płusa, Ryszard Mężyk, Magdalena Chrapek, Stanisław Góźdż, Aldona Kowalska
Software Mentions: 2
Published: about 7 years ago
10.1186/s12879-021-06646-y
Prevalence estimates of genital Chlamydia trachomatis infection in Belgium: results from two cross-sectional studies
Cited by: 2
Author(s): Natalie Fischer, Ilse Peeters, Sofieke Klamer, Marion Montourcy, Vicky Cuylaerts, Dominique Van Beckhoven, Irith De Baetselier, Johan Van der Heyden, Wim Vanden Berghe
Software Mentions: 2
Published: about 3 years ago
10.1186/1756-0500-4-555
A novel mean-centering method for normalizing microRNA expression from high-throughput RT-qPCR data
Cited by: 59
Author(s): Dennis Wylie, Jeffrey Shelton, Ashish Choudhary, Alex Adai
Software Mentions: 2
Published: almost 13 years ago
10.1371/journal.pntd.0006277
Validation of rK39 immunochromatographic test and direct agglutination test for the diagnosis of Mediterranean visceral leishmaniasis in Spain
Cited by: 41
Author(s): Mathieu Bangert, María Flóres-Chávez, Ivonne Pamela Llanes-Acevedo, Carolina Arcones, Carmen Chicharro, E. Barbero García, Sergio Ortega, Javier Nieto, Israel Cruz
Software Mentions: 2
Published: over 6 years ago
10.1016/j.canep.2018.11.011
Colorectal cancer ascertainment through cancer registries, hospital episode statistics, and self-reporting compared to confirmation by clinician: A cohort study nested within the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS)
Cited by: 5
Author(s): Darren Thomas, Aleksandra Gentry‐Maharaj, Andy Ryan, Evangelia‐Ourania Fourkala, Sophia Apostolidou, Matthew Burnell, Wendy K. Alderton, Julie C. Barnes, John F. Timms, Usha Menon
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0218708
An exploratory investigation of geographic disparities of stroke prevalence in Florida using circular and flexible spatial scan statistics
Cited by: 5
Author(s): Shamarial Roberson, Rahel Dawit, Jaleesa Moore Moore, Agricola Odoi
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0256352
Clinical validation of an open-access SARS-COV-2 antigen detection lateral flow assay, compared to commercially available assays
Cited by: 12
Author(s): Christine Bachman, Benjamin D. Grant, Caitlin Anderson, Luis F. Alonzo, Spencer Garing, Sam A. Byrnes, Roberto Rivera, Stephen Burkot, Alexey Ball, James W. Stafford, Wenbo Wang, Dipayan Banik, Matthew D. Keller, David M. Cate, Kevin P. Nichols, Bernhard H. Weigl, Puneet Dewan
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0190612
Non-invasive assessment of cerebral oxygenation: A comparison of retinal and transcranial oximetry
Cited by: 5
Author(s): Karel Van Keer, Jan Van Keer, João Barbosa Breda, Vahid Nassiri, C. De Deyne, Cornelia Genbrugge, Luís Abegão Pinto, Ingeborg Stalmans, Evelien Vandewalle
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0183029
Optimal waist circumference threshold for diagnosing metabolic syndrome in African people living with HIV infection
Cited by: 2
Author(s): Kim Anh Nguyen, Nasheeta Peer, Anniza de Villiers, Barbara Mukasa, Tandi E. Matsha, Edward J. Mills, André Pascal Kengne
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0211483
Glycated haemoglobin threshold for dysglycaemia screening, and application to metabolic syndrome diagnosis in HIV-infected Africans
Cited by: 9
Author(s): Kim Anh Nguyen, Nasheeta Peer, Anniza de Villiers, Barbara Mukasa, Tandi E. Matsha, Edward J. Mills, André Pascal Kengne
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12936-021-03917-6
Performance evaluation of RDT, light microscopy, and PET-PCR for detecting Plasmodium falciparum malaria infections in the 2018 Zambia National Malaria Indicator Survey
Cited by: 5
Author(s): Mulenga Mwenda, Abebe A. Fola, Ilinca I. Ciubotariu, Conceptor Mulube, Brenda Mambwe, Rachael Kasaro, Hawela Moonga, Busiku Hamainza, John M. Miller, Giovanna Carpi, Daniel J. Bridges
Software Mentions: 2
Published: about 3 years ago
10.1186/s12936-019-2812-0
High Plasmodium infection and multiple insecticide resistance in a major malaria vector Anopheles coluzzii from Sahel of Niger Republic
Cited by: 12
Author(s): Sulaiman S. Ibrahim, Muhammad Mahmood Mukhtar, Helen Irving, Rabiou Labbo, Michael O. Kusimo, I Mahamadou, Charles S. Wondji
Software Mentions: 2
Published: over 5 years ago
10.1186/s12936-021-03905-w
The prevalence and density of asymptomatic Plasmodium falciparum infections among children and adults in three communities of western Kenya
Cited by: 3
Author(s): Christina Salgado, George Ayodo, Michael D. Macklin, Meetha P. Gould, Srinivas Nallandhighal, Eliud O. Odhiambo, Andrew Obala, Wendy Prudhomme O’Meara, Chandy C. John, Tuan M. Tran
Software Mentions: 2
Published: about 3 years ago
10.1371/journal.pone.0139545
Place of Residence Moderates the Risk of Infant Death in Kenya: Evidence from the Most Recent Census 2009
Cited by: 9
Author(s): Oliver Gruebner, Sven Lautenbach, Mobarak Hossain Khan, Samuel Kipruto, Michael Epprecht, Sandro Galea
Software Mentions: 2
Published: about 9 years ago
10.3390/cancers13081848
The Effects of In-Plane Spatial Resolution on CT-Based Radiomic Features’ Stability with and without ComBat Harmonization
Cited by: 29
Author(s): Abdalla Ibrahim, Sergey Primakov, Bruno Barufaldi, Raymond J. Acciavatti, R. Granzier, Roland Hustinx, Felix M. Mottaghy, Henry C. Woodruff, Joachim E. Wildberger, Philippe Lambin, Andrew D. A. Maidment
Software Mentions: 2
Published: over 3 years ago
10.3390/cancers12061650
Safety of BRAF+MEK Inhibitor Combinations: Severe Adverse Event Evaluation
Cited by: 16
Author(s): Tomer Meirson, Nethanel Asher, David Bomze, Gal Markel
Software Mentions: 2
Published: over 4 years ago
10.3390/microorganisms9091834
Comparison of Quantification Methods to Estimate Farm-Level Usage of Antimicrobials in Medicated Feed in Dairy Farms from Québec, Canada
Cited by: 1
Author(s): Hélène Lardé, David Francoz, Jean-Philippe Roy, Marie Archambault, Jonathan Massé, Marie-Ève Paradis, Simon Dufour
Software Mentions: 2
Published: about 3 years ago
10.3390/microorganisms9050919
Widespread Infection with Hemotropic Mycoplasmas in Free-Ranging Dogs and Wild Foxes Across Six Bioclimatic Regions of Chile
Cited by: 5
Author(s): Sophia Di Cataldo, Aitor Cevidanes, C Ulloa-Contreras, Carlos Sacristán, Diego Peñaloza-Madrid, Juliana A. Vianna, Daniel González‐Acuña, Nicole Sallaberry‐Pincheira, Javier Cabello, Constanza Napolitano, Ezequiel Hidalgo‐Hermoso, Gerardo Acosta‐Jamett, Javier Millán
Software Mentions: 2
Published: over 3 years ago
10.1016/j.jviromet.2020.113975
Evaluation of the diagnostic accuracy of an affordable rapid diagnostic test for African Swine Fever antigen detection in Lao People’s Democratic Republic
Cited by: 5
Author(s): Nina Matsumoto, Jarunee Siengsanan-Lamont, Laurence J. Gleeson, Bounlom Douangngeun, Watthana Theppangna, Syseng Khounsy, Phouvong Phommachanh, Tariq Hisham Beshara Halasa, R. D. Bush, Stuart D. Blacksell
Software Mentions: 1
Published: almost 4 years ago
10.4269/ajtmh.18-0992
Clinical Evaluation of a Multiplex PCR for the Detection of Salmonella enterica Serovars Typhi and Paratyphi A from Blood Specimens in a High-Endemic Setting
Cited by: 13
Author(s): Stéphane Pouzol, Arif Mohammad Tanmoy, Dilruba Ahmed, Farhana Khanam, W. Abdullah Brooks, Golam Sarower Bhuyan, Laëtitia Fabre, Juliet E. Bryant, Marie Paule Gustin, Philippe Vanhems, Bill Carman, François‐Xavier Weill, Firdausi Qadri, Samir K. Saha, Hubert P. Endtz
Software Mentions: 1
Published: about 5 years ago
10.1128/AEM.00337-16
Use of Colistin and Other Critical Antimicrobials on Pig and Chicken Farms in Southern Vietnam and Its Association with Resistance in Commensal Escherichia coli Bacteria
Cited by: 133
Author(s): Nhung T. Nguyen, Hoa M. Nguyen, Cuong Nguyen, Trung Vu Nguyen, Men T. Nguyen, Hieu Q. Thai, Mai H. Ho, Guy Thwaites, Ngo Thi Hoa, Stephen Baker, Juan Carrique-Mas
Software Mentions: 1
Published: over 8 years ago
10.1186/s12879-021-06327-w
Cutaneous Leishmaniasis in Pakistan: a neglected disease needing one health strategy
Cited by: 9
Author(s): Behzad Kayani, Shakera Sadiq, Hamad Bin Rashid, Naseer Ahmed, Altaf Mahmood, Muhammad Shakeel Khaliq, Rubab Maqsood, Haroon Rashid, Saima Hasan, Muhammad Mushtaq, Ubaid-ur-Rehman Zia, Mamoona Chaudhry
Software Mentions: 1
Published: over 3 years ago
10.1186/s12916-019-1436-0
Accuracy in detecting inadequate research reporting by early career peer reviewers using an online CONSORT-based peer-review tool (COBPeer) versus the usual peer-review process: a cross-sectional diagnostic study
Cited by: 25
Author(s): Anthony Chauvin, Philippe Ravaud, David Moher, David L. Schriger, Sally Hopewell, Daniel Shanahan, Sabina Alam, Gabriel Baron, Jean-Philippe Régnaux, Perrine Créquit, Valéria Martinez, Carolina Riveros, L. Le Cléach, Alessandro Recchioni, Douglas G. Altman, Isabelle Boutron
Software Mentions: 1
Published: about 5 years ago
10.1186/s12891-017-1799-3
Diagnostic validity and triage concordance of a physiotherapist compared to physicians’ diagnoses for common knee disorders
Cited by: 20
Author(s): Simon Décary, Michel Fallaha, B. Pelletier, Pierre Frémont, Johanne Martel‐Pelletier, J.-P. Pelletier, Debbie Ehrmann Feldman, Marie‐Pierre Sylvestre, Pascal‐André Vendittoli, François Desmeules
Software Mentions: 1
Published: about 7 years ago
10.1186/s12887-020-1919-3
Rapid brain MRI protocols reduce head computerized tomography use in the pediatric emergency department
Cited by: 22
Author(s): Sriram Ramgopal, Sabrina A. Karim, Subramanian Subramanian, Andre D. Furtado, Jennifer R. Marin
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12889-021-10812-x
Development and evaluation of a new measure of children’s play: the Children’s Play Scale (CPS)
Cited by: 8
Author(s): Helen F. Dodd, Rachel J. Nesbit, Laura R. Maratchi
Software Mentions: 1
Published: over 3 years ago
10.1186/s12889-017-4881-8
The MATEX cohort – a Finnish population register birth cohort to study health effects of prenatal exposures
Cited by: 4
Author(s): Isabell Rumrich, Kirsi Vähäkangas, Matti Viluksela, Mika Gissler, Heljä‐Marja Surcel, Hanna de Ruyter, Jukka Jokinen, Otto Hänninen
Software Mentions: 1
Published: about 7 years ago
10.1186/1471-2458-14-46
The importance of providing counselling and financial support to patients receiving treatment for multi-drug resistant TB: mixed method qualitative and pilot intervention studies
Cited by: 67
Author(s): Sushil Baral, Yeshoda Aryal, Rekha Bhattrai, Rebecca King, James Newell
Software Mentions: 1
Published: almost 11 years ago
10.1186/s13104-019-4107-5
Multilocus sequence typing (MLST), porA and flaA typing of Campylobacter jejuni isolated from cats attending a veterinary clinic
Cited by: 2
Author(s): Vathsala Mohan, Ihab Habib
Software Mentions: 1
Published: almost 6 years ago
10.1186/1746-6148-7-50
Improved specificity for detection of Mycobacterium bovis in fresh tissues using IS6110 real-time PCR
Cited by: 42
Author(s): Tyler C. Thacker, Beth Harris, Mitchell V. Palmer, W. Ray Waters
Software Mentions: 1
Published: almost 14 years ago
10.1155/2019/3295781
Genetic Variants in Group-Specific Component (GC) Gene Are Associated with Breast Cancer Risk among Chinese Women
Cited by: 2
Author(s): Fuxing Chen, Zheng Zhu, Fränzel J.B. van Duijnhoven, Meihua Dong, Yun Qian, Hong‐Ren Yu, Jie Yang, Lan Cui, Renqiang Han, Jian Su, Wei‐Dong Du, Jinyi Zhou, Ming Wu
Software Mentions: 1
Published: about 5 years ago
10.1111/bjd.15021
Incidence, prevalence and mortality of patients with psoriasis: a U.K. population-based cohort study
Cited by: 155
Author(s): David A. Springate, Rosa Parisi, Evangelos Kontopantelis, David Reeves, C.E.M. Griffiths, Darren M. Ashcroft
Software Mentions: 1
Published: almost 8 years ago
10.4317/medoral.21611
Impact of early childhood caries and its treatment under general anesthesia on orofacial function and quality of life : A prospective comparative study
Cited by: 20
Author(s): Valérie Collado, Hélène Pichot, Caroline Delfosse, Caroline Eschevins, Emmanuel Naline, Martine Hennequin
Software Mentions: 1
Published: almost 8 years ago
10.3390/microorganisms9081700
Reduced Relative Sensitivity of the Elecsys SARS-CoV-2 Antigen Assay in Saliva Compared to Nasopharyngeal Swabs
Cited by: 9
Author(s): Annette Audigé, Jürg Böni, Peter W. Schreiber, Thomas Scheier, Roberto Buonomano, Alain Rudiger, Dominique L Braun, Gerhard Eich, Dagmar I. Keller, Barbara Hasse, Christoph Berger, Huldrych F. Günthard, Amapola Manrique, Alexandra Trkola, Michael Huber
Software Mentions: 1
Published: over 3 years ago
10.3390/microorganisms9051105
Isolation Procedure for CP E. coli from Caeca Samples under Review towards an Increased Sensitivity
Cited by: 0
Author(s): Natalie Pauly, Yvonne Klaar, Tanja Skladnikiewicz-Ziemer, Katharina Juraschek, Mirjam Grobbel, Jens A. Hammerl, Lukas Hemmers, Annemarie Käsbohrer, Štefan Schwarz, Diana Meemken, Bernd‐Alois Tenhagen, Alexandra Irrgang
Software Mentions: 1
Published: over 3 years ago
10.3390/molecules25184175
Analytical and Clinical Assessment of a Portable, Isothermal Recombinase Polymerase Amplification (RPA) Assay for the Molecular Diagnosis of Urogenital Schistosomiasis
Cited by: 17
Author(s): John Archer, Rebecca Barksby, Tom Pennance, Penelope Rostron, Faki Bakar, Stefanie Knopp, Fiona Allan, Fatma Kabole, Said M. Ali, M. Shaali, David Rollinson, Bonnie L. Webster
Software Mentions: 1
Published: about 4 years ago
10.1186/s12985-018-1028-1
Enzyme-linked immunosorbent assay using recombinant envelope protein 2 antigen for diagnosis of Chikungunya virus
Cited by: 18
Author(s): Marcílio Jorge Fumagalli, William Marciel de Souza, Danillo Lucas Alves Espósito, Karla Angélica Silva do Nascimento, Marília Farignoli Romeiro, Edson Zangiacomi Martinez, Benedito Antônio Lopes da Fonseca, Luíz Tadeu Moraes Figueiredo
Software Mentions: 1
Published: over 6 years ago
10.1186/s12985-021-01516-0
Performance of BioFire array or QuickVue influenza A + B test versus a validation qPCR assay for detection of influenza A during a volunteer A/California/2009/H1N1 challenge study
Cited by: 3
Author(s): David R. McIlwain, Han Chen, Maria Apkarian, Melton B. Affrime, Bonnie Bock, Kenneth Kim, Nilanjan Mukherjee, Garry P. Nolan, Monica McNeal
Software Mentions: 1
Published: over 3 years ago
10.3390/v12030358
Genetic Strain Diversity of Multi-Host RNA Viruses that Infect a Wide Range of Pollinators and Associates is Shaped by Geographic Origins
Cited by: 15
Author(s): Jana Dobelmann, Antoine Felden, Philip J. Lester
Software Mentions: 1
Published: over 4 years ago
10.3390/v13091749
Serological Surveillance of Influenza D Virus in Ruminants and Swine in West and East Africa, 2017–2020
Cited by: 9
Author(s): Idrissa Nonmon Sanogo, Casimir Kouakou, Komla Batawui, Fidélia Djegui, Denis K. Byarugaba, Rachidatou Adjin, Komlan Adjabli, Fred Wabwire‐Mangen, Bernard Erima, Gladys Atim, Qouilazoni A. Ukuli, Titus Tugume, Koffi Dogno, Wolali Go-Maro, Emmanuel Couacy‐Hymann, Ghazi Kayali, Pamela McKenzie, Richard J. Webby, Mariette Ducatez
Software Mentions: 1
Published: about 3 years ago
10.1186/s13071-018-2963-9
Multiplexed-tandem PCR (MT-PCR) assay to detect and differentiate gastrointestinal nematodes of alpacas
Cited by: 9
Author(s): Mohammed H. Rashid, Hagos Gebrekidan, Abdul Jabbar
Software Mentions: 1
Published: over 6 years ago
10.3390/pathogens10040489
Seroprevalence and Risk Factors Associated with Chlamydia abortus Infection in Sheep and Goats in Eastern Saudi Arabia
Cited by: 6
Author(s): Mahmoud Fayez, Ahmed Elmoslemany, Mohammed Alorabi, Mohamed Alkafafy, Ibrahim Qasim, Theeb Al-Marri, Ibrahim Elsohaby
Software Mentions: 1
Published: over 3 years ago
10.3390/pathogens9110973
Occurrence and Antimicrobial Susceptibility Profiles of Multidrug-Resistant Aeromonads Isolated from Freshwater Ornamental Fish in Chiang Mai Province
Cited by: 18
Author(s): Banthita Saengsitthisak, Wasana Chaisri, Veerasak Punyapornwithaya, Raktham Mektrirat, Srikanjana Klayraung, J.K. Bernard, Surachai Pikulkaew
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pntd.0008402
Trypanosoma cruzi loop-mediated isothermal amplification (Trypanosoma cruzi Loopamp) kit for detection of congenital, acute and Chagas disease reactivation
Cited by: 19
Author(s): S Besuschio, Albert Picado, Arturo Muñoz-Calderón, Diana Patricia Wehrendt, Marisa Fernández, Alejandro Francisco Benatar, Zoraida Díaz-Bello, Cecilia Irurtia, Israel Cruz, Joseph Mathu Ndung’u, María Luisa Cafferata, Graciela Montenegro, Sérgio Sosa Estani, Raúl Horacio Lucero, Belkisyolé Alarcón de Noya, Silvia Andrea Longhi, Alejandro G. Schijman
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pntd.0009223
Clinical and immunological characteristics of tegumentary leishmaniasis cases in Bolivia
Cited by: 7
Author(s): Cristina Ballart, Mary Cruz Torrico, Gisela Vidal, Faustino Torrico, Daniel Lozano, Montserrat Gállego, Lilian Pinto, Ernesto Rojas, Ruth Aguilar, Carlota Dobaño, Sonia Ares-Gómez, Albert Picado
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0068419
Procalcitonin Guidance to Reduce Antibiotic Treatment of Lower Respiratory Tract Infection in Children and Adolescents (ProPAED): A Randomized Controlled Trial
Cited by: 88
Author(s): Gurli Baer, Philipp Baumann, Michael Buettcher, Ulrich Heininger, G Bérthet, Juliane Schäfer, Heiner C. Bucher, Daniel Trachsel, Jacques Schneider, Muriel Gambon, Diana Reppucci, Jessica M. Bonhoeffer, Jody Stähelin-Massik, Philipp Schuetz, Beat Müeller, Gabor Szinnai, Urs B. Schaad, Jan Bonhoeffer
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0182688
Assessment of WHO criteria for identifying ART treatment failure in Vietnam from 2007 to 2011
Cited by: 6
Author(s): Nicole K. Le, Emilia Riggi, Gaetano Marrone, Tam Van Vu, Ricardo Izurieta, Chuc Kim Thi Nguyen, Mattias Larsson, Cuong Duy
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0155366
House Sparrows Do Not Constitute a Significant Salmonella Typhimurium Reservoir across Urban Gradients in Flanders, Belgium
Cited by: 7
Author(s): Lieze Rouffaer, Luc Lens, Roel Haesendonck, Aimeric Teyssier, Noraine Salleh Hudin, Diederik Strubbe, Freddy Haesebrouck, Frank Pasmans, An Martel
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0077842
Exposure of Wild Boar to Mycobacterium tuberculosis Complex in France since 2000 Is Consistent with the Distribution of Bovine Tuberculosis Outbreaks in Cattle
Cited by: 40
Author(s): Céline Richomme, Mariana Boadella, Aurélie Courcoul, Benoı̂t Durand, Antoine Drapeau, Yannick Corde, Jean Hars, Ariane Payne, Alexandre Fediaevsky, María Laura Boschiroli
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0257581
Drivers of exit and outcomes for Thoroughbred racehorses participating in the 2017–2018 Australian racing season
Cited by: 5
Author(s): Kshitiz Shrestha, James R. Gilkerson, Mark Stevenson, M L Flash
Software Mentions: 1
Published: about 3 years ago
10.1371/journal.pone.0114479
School-Located Influenza Vaccination Reduces Community Risk for Influenza and Influenza-Like Illness Emergency Care Visits
Cited by: 25
Author(s): Cuc H. Tran, Jonathan D. Sugimoto, Juliet R. C. Pulliam, Kathleen A. Ryan, Paul Myers, Joan B. Castleman, Randell E. Doty, Jackie Johnson, Jim Stringfellow, Nadia Kovacevich, Joe Brew, Lai Ling Cheung, Brad Caron, Gloria Lipori, Christopher A. Harle, Charles E. Alexander, Yang Yang, Ira M. Longini, M. Elizabeth Halloran, J. Glenn Morris, Parker A. Small
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0174434
Sports-related sudden cardiac deaths in the young population of Switzerland
Cited by: 23
Author(s): Babken Asatryan, Cristina Vital, Christoph Kellerhals, Argelia Medeiros-Domingo, Christoph Gräni, Lukas Trachsel, Christian Schmied, Ardan M. Saguner, Prisca Eser, David Herzig, Stephan A. Bolliger, Katarzyna Michaud, Matthias Wilhelm
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0241246
Coxiella burnetii in slaughterhouses in Brazil: A public health concern
Cited by: 12
Author(s): Mateus de Souza Ribeiro Mioni, Francisco Borges Costa, Bruna Letícia Devidé Ribeiro, Wanderson Sirley Reis Teixeira, Vanessa Cristina Pelícia, Marcelo Bahia Labruna, Élodie Rousset, Karim Sidi-Boumedine, Richard Thiéry, Jane Megid
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0104383
Epidemiological Investigation of Bovine Tuberculosis Herd Breakdowns in Spain 2009/2011
Cited by: 41
Author(s): Sintayehu Guta, Jordi Domènech Casal, Sebastián Napp, José Luis Sáez, Ariadna García-Saenz, Bernat Pérez de Val, Beatriz Romero, Julio Álvarez, Alberto Allepuz
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0035284
The Influence of Meteorology on the Spread of Influenza: Survival Analysis of an Equine Influenza (A/H3N8) Outbreak
Cited by: 37
Author(s): Simon M. Firestone, Naomi Cogger, Michael P. Ward, Jenny‐Ann L.M.L. Toribio, Barbara Moloney, Navneet K. Dhand
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0041901
Empirical Validation of Pooled Whole Genome Population Re-Sequencing in Drosophila melanogaster
Cited by: 85
Author(s): Yuan Zhu, Alan O. Bergland, Josefa González, Dmitri A. Petrov
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0053524
Risk Factors and Characteristics of Low Pathogenic Avian Influenza Virus Isolated from Commercial Poultry in Tunisia
Cited by: 31
Author(s): Wafa Tombari, Mathilde Paul, Jihène Bettaieb, Imen Larbi, Jihene Nsiri, Imen Elbehi, Latifa Gribâa, Abdeljelil Ghram
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0070157
Prevalence of the Crayfish Plague Pathogen Aphanomyces astaci in Populations of the Signal Crayfish Pacifastacus leniusculus in France: Evaluating the Threat to Native Crayfish
Cited by: 58
Author(s): Lenka Filipová, Adam Petrusek, Klára Matasová, Carine Delaunay, Frédéric Grandjean
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0254156
Field evaluation of a prototype tuberculosis lipoarabinomannan lateral flow assay on HIV-positive and HIV-negative patients
Cited by: 3
Author(s): John T. Connelly, Alfred Andama, Benjamin D. Grant, Alexey Ball, Sandra Mwebe, Lucy Asege, Martha Nakaye, Brianda Barrios Lopez, Helen Hsieh, David Katumba, Job Mukwatamundu, Mayimuna Nalubega, Victoria M. Hunt, Stephen Burkot, Harisha Ramachandraiah, Alok Choudhary, Lech Ignatowicz, Bernhard H. Weigl, Christine Bachman, Jerry Mulondo, Fred C. Semitala, William Worodria, Abraham Pinter, Beston Hamasur, David Bell, Adithya Cattamanchi, Ákos Somoskövi
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0251147
The application of a workflow integrating the variable reproducibility and harmonizability of radiomic features on a phantom dataset
Cited by: 23
Author(s): Abdalla Ibrahim, Ralph T.H. Leijenaar, Sergey Primakov, Roland Hustinx, Felix M. Mottaghy, Henry C. Woodruff, Andrew D. A. Maidment, Philippe Lambin
Software Mentions: 1
Published: over 3 years ago
10.7759/cureus.13326
Failure to Clear Intermediate Lactate Levels in Ward Patients With Admission Blood Cultures Did Not Increase the Risk of Intensive Care Unit Transfer or In-Hospital Mortality: A Retrospective Cohort Study
Cited by: 0
Author(s): Roman Dudaryk, Jose R Navas-Blanco, Tanira Ferreira, Richard H. Epstein
Software Mentions: 1
Published: almost 4 years ago
10.3390/diagnostics10110967
A Preliminary Study on the Safety of Elastography during Pregnancy: Hypoacusia, Anthropometry, and Apgar Score in Newborns
Cited by: 3
Author(s): Paloma Massó, Juan Melchor, Guillermo Rus, Francisca S. Molina
Software Mentions: 1
Published: about 4 years ago
10.3390/diagnostics11030386
Diagnosis of COVID-19 in Patients with Negative Nasopharyngeal Swabs: Reliability of Radiological and Clinical Diagnosis and Accuracy Versus Serology
Cited by: 6
Author(s): Antonio Mirijello, Michele Zarrelli, Giuseppe Miscio, Angela de Matthaeis, Pamela Piscitelli, Cristiano Carbonelli, Annabella Di Giorgio, Michele Inglese, Gianluca Ciliberti, Carmen Marciano, Cristina Borelli, Doriana Vergara, Giulia Castorani, Grazia Vittoria Orciulo, Lazzaro Di Mauro, Massimo Carella, Annalisa Simeone, Massimiliano Copetti, Maurizio Leone, Salvatore De Cosmo, the CSS-COVID-Group
Software Mentions: 1
Published: over 3 years ago
10.1017/S0950268816002831
Staff exchange within and between nursing homes in The Netherlands and potential implications for MRSA transmission
Cited by: 5
Author(s): Van Gaalen, Hopman Ha, Anja Haenen, Van Den Dool C
Software Mentions: 1
Published: almost 8 years ago
10.3389/fcimb.2020.00351
High-Throughput Multiparallel Enteropathogen Detection via Nano-Liter qPCR
Cited by: 6
Author(s): Jessica A. Grembi, Koshlan Mayer-Blackwell, Stephen P. Luby, Alfred M. Spormann
Software Mentions: 1
Published: over 4 years ago
10.3389/fgene.2021.663449
Associations Between Sleep Quality and Health Span: A Prospective Cohort Study Based on 328,850 UK Biobank Participants
Cited by: 8
Author(s): Muhammed Lamin Sambou, Xiaoyu Zhao, Tongtong Hong, Jingyi Fan, Til Bahadur Basnet, Meng Zhu, Cheng Wang, Dong Hang, Jiang Yue, Juncheng Dai
Software Mentions: 1
Published: over 3 years ago
10.3389/fpubh.2021.675065
Estimated Dissemination Ratio—A Practical Alternative to the Reproduction Number for Infectious Diseases
Cited by: 0
Author(s): Francisco J. Pérez‐Reche, Nick Taylor, Christopher McGuigan, Philip Conaglen, Ken J. Forbes, Norval James Colin Strachan, Naomi Honhold
Software Mentions: 1
Published: over 3 years ago
10.3389/fvets.2020.00259
Risk Factors for Outbreaks of Lumpy Skin Disease and the Economic Impact in Cattle Farms of Nakuru County, Kenya
Cited by: 23
Author(s): Samuel Kipruto Kiplagat, P. Kitala, Joshua Orungo Onono, Philippa M. Beard, Nicholas A. Lyons
Software Mentions: 1
Published: over 4 years ago
10.1111/irv.12777
Severe and moderate seasonal influenza epidemics among Italian healthcare workers: A comparison of the excess of absenteeism
Cited by: 5
Author(s): Maria Michela Gianino, Omar Kakaa, Gianfranco Politano, Antonio Scarmozzino, Alfredo Benso, Carla Maria Zotti
Software Mentions: 1
Published: over 4 years ago
10.1001/jamanetworkopen.2020.0202
Tumor Mutational Burden From Tumor-Only Sequencing Compared With Germline Subtraction From Paired Tumor and Normal Specimens
Cited by: 31
Author(s): Kaushal Parikh, Robert Huether, Kevin P. White, Derick Hoskinson, Nike Beaubier, Haidong Dong, Alex A. Adjei, Aaron S. Mansfield
Software Mentions: 1
Published: over 4 years ago
10.1001/jamanetworkopen.2021.20040
Detection of Leptomeningeal Disease Using Cell-Free DNA From Cerebrospinal Fluid
Cited by: 21
Author(s): Michael White, Robert H. Klein, Brian Shaw, Albert Kim, Megha Subramanian, Joana L. Mora, Anita Giobbie‐Hurder, Deepika Nagabhushan, Aarushi Jain, Mohini Singh, Benjamin M. Kuter, Naema Nayyar, Mia Bertalan, Jackson H. Stocking, Samuel C. Markson, Matthew Lastrapes, Christopher Alvarez‐Breckenridge, Daniel P. Cahill, Gregory Gydush, Justin Rhoades, Denisse Rotem, Viktor A. Adalsteinsson, Maura Mahar, Alexander Kaplan, Kevin Oh, Ryan J. Sullivan, Elizabeth R. Gerstner, Scott L. Carter, Priscilla K. Brastianos
Software Mentions: 1
Published: over 3 years ago
10.1007/s00432-020-03326-3
Risk factors and treatment outcomes of 239 patients with testicular granulosa cell tumors: a systematic review of published case series data
Cited by: 20
Author(s): Josias Bastian Grogg, Kym Schneider, Peter-Karl Bode, Benedikt Kranzbühler, Daniel Eberli, Tullio Sulser, Jörg Beyer, Anja Lorch, Thomas Hermanns, Christian Daniel Fankhauser
Software Mentions: 1
Published: over 4 years ago
10.1128/JCM.01834-13
Evaluation of GeneXpert MTB/RIF for Diagnosis of Tuberculous Meningitis
Cited by: 171
Author(s): Nguyen Thi Quynh Nhu, Dorothee Heemskerk, Do Dang Anh Thu, Tran Thi Hong Chau, Nguyen Thi Hoang, Ho Dang Trung Nghia, Pham Phu Loc, Đặng Thị Minh Hà, Laura Merson, Tran Thi Van Thinh, Jeremy Day, Nguyễn Văn Vĩnh Châu, Marcel Wolbers, Jeremy Farrar, Maxine Caws
Software Mentions: 1
Published: almost 11 years ago
10.1098/rspb.2017.0715
The persistence of multiple strains of avian influenza in live bird markets
Cited by: 7
Author(s): Amy Pinsent, Kim M. Pepin, Hua Zhu, Yi Guan, Michael T. White, Steven Riley
Software Mentions: 1
Published: almost 7 years ago
10.1186/s13014-020-01514-6
Deep convolutional neural networks for automated segmentation of brain metastases trained on clinical data
Cited by: 62
Author(s): Khaled Bousabarah, Maximilian I. Ruge, Julia-Sarita Brand, Mauritius Hoevels, Daniel Rueß, Jan Borggrefe, Nils Große Hokamp, Veerle Visser‐Vandewalle, David Maintz, Harald Treuer, Martin Köcher
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-017-13496-9
Environmental and behavioral changes may influence the exposure of an Arctic apex predator to pathogens and contaminants
Cited by: 67
Author(s): Todd C. Atwood, Colleen Duncan, Kelly A. Patyk, Pauline Nol, Jack C. Rhyan, Matthew McCollum, Melissa A. McKinney, Andrew M. Ramey, Camila K. Cerqueira‐Cézar, O. C. H. Kwok, J. P. Dubey, Steven G. Hennager
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-019-40072-0
Comparison of self-reported and register-based hospital medical data on comorbidities in women
Cited by: 11
Author(s): Peh Joo Ho, Chuen Seng Tan, Shajedur Rahman Shawon, Mikael Eriksson, Li Min Lim, Hui Miao, Eileen Png, Kee Seng Chia, Mikael Hartman, Jonas F. Ludvigsson, Kamila Czene, Per Hall, Jingmei Li
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-019-47642-2
Pyrosequencing versus methylation-specific PCR for assessment of MGMT methylation in tumor and blood samples of glioblastoma patients
Cited by: 21
Author(s): Anna Estival, Carolina Sanz, José Luis Ramirez, J.M. Velarde, Marta Doménech, Cristina Carrato, R. de las Peñas, Miguel Gil-Gil, Juan Manuel Sepúlveda, Roser García Armengol, I. Cardiel, A. Berrocal, Raquel Luque, Ana Herrero, Carmen Balañá
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-019-51548-4
Complications associated with perioperative use of tyrosine kinase inhibitor in cytoreductive nephrectomy
Cited by: 3
Author(s): Filipe Carvalho, Cheng Zheng, Kenneth Witmer, John O’Neill, John H. Lynch, Keith Kowalczyk
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-021-83365-z
Systematic evaluation of multiple qPCR platforms, NanoString and miRNA-Seq for microRNA biomarker discovery in human biofluids
Cited by: 23
Author(s): Lewis Z. Hong, Lihan Zhou, Ruiyang Zou, Chin Meng Khoo, Adeline Lai San Chew, Chih‐Liang Chin, Shian-Jiun Shih
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-021-89340-y
Elevated transaminases and hypoalbuminemia in Covid-19 are prognostic factors for disease severity
Cited by: 20
Author(s): Jason Wagner, Victor Garcia-Rodriguez, Abraham Yu, Barbara E. Dutra, Scott Larson, Brooks D. Cash, Andrew Dupont, A. Farooq
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-021-98460-4
Clinical features, epidemiology, autoantibody status, HLA haplotypes and genetic mechanisms of type 1 diabetes mellitus among children in Qatar
Cited by: 6
Author(s): Basma Haris, Ikhlak Ahmed, Najeeb Syed, Hakeem Almabrazi, Saras Saraswathi, Sara Al‐Khawaga, Amira Saeed, Shihab Mundekkadan, Idris Mohammed, Sanaa Sharari, Iman Hawari, Noor Hamed, Houda Afyouni, Tasneem Abdel-Karim, Shayma Mohammed, Amal Khalifa, Maryam Al-Maadheed, Mahmoud Zyoud, Ahmed Shamekh, Ahmed Elawwa, Mohammed Yousuf Karim, Fawziya Al‐Khalaf, Zohreh Tatari-Calderone, Goran Petrovski, Khalid Hussain
Software Mentions: 1
Published: about 3 years ago
10.3390/s21062083
Deep Learning Automated Segmentation for Muscle and Adipose Tissue from Abdominal Computed Tomography in Polytrauma Patients
Cited by: 18
Author(s): Leanne L.G.C. Ackermans, Leroy Volmer, Leonard Wee, Ralph Brecheisen, Patricia Sánchez-González, Alexander P. Seiffert, Enrique J. Gómez, André Dekker, Jan A. Ten Bosch, Steven W. M. Olde Damink, Taco J. Blokhuis
Software Mentions: 1
Published: over 3 years ago
10.3390/tropicalmed6020051
Improved Detection of Intestinal Helminth Infections with a Formalin Ethyl-Acetate-Based Concentration Technique Compared to a Crude Formalin Concentration Technique
Cited by: 3
Author(s): Tobias Brummaier, Laypaw Archasuksan, Dorn Watthanakulpanich, Daniel Paris, Jürg Utzinger, Rose McGready, Stéphane Proux, François Nosten
Software Mentions: 1
Published: over 3 years ago
10.1186/s12939-021-01454-x
“The devil is in the detail”: geographical inequalities of femicides in Ecuador
Cited by: 2
Author(s): Osvaldo Fonseca-Rodríguez, Miguel San Sebastián
Software Mentions: 1
Published: over 3 years ago
10.1007/s00264-020-04552-7
Improved pre-operative diagnostic accuracy for low-grade prosthetic joint infections using second-generation multiplex Polymerase chain reaction on joint fluid aspirate
Cited by: 19
Author(s): Christian Suren, Susanne Feihl, Sabrina Cabric, Ingo J. Banke, Bernhard Haller, Andrej Trampuž, Rüdiger von Eisenhart-Rothe, Peter Michael Prodinger
Software Mentions: 1
Published: over 4 years ago
10.1208/s12248-012-9440-8
External Validation of the Bilirubin–Atazanavir Nomogram for Assessment of Atazanavir Plasma Exposure in HIV-1-Infected Patients
Cited by: 1
Author(s): Dinko Rekić, Daniel Röshammar, Martin Bergstrand, Joel Tärning, Andrea Calcagno, Antonio D’Avolio, Vidar Ormaasen, Marie Vigan, Aurélie Barrail-Tran, Michael Ashton, Magnus Gisslén, Angela Äbelö
Software Mentions: 1
Published: almost 12 years ago