cran: epiR | Projects | Ecosyste.ms: Papers

10.1186/s12885-021-08598-7

Cannabinoid exposure as a major driver of pediatric acute lymphoid Leukaemia rates across the USA: combined geospatial, multiple imputation and causal inference study
Cited by: 24
Author(s): Albert Stuart Reece, Gary Kenneth Hulse
Software Mentions: 15
Published: about 3 years ago

10.3390/pathogens9100841

Diverse Epidemiology of Leptospira Serovars Notified in New Zealand, 1999–2017
Cited by: 12
Author(s): Shahista Nisa, David A. Wilkinson, Olivia Angelin‐Bonnet, Shevaun Paine, Karen Weber Cullen, Jackie Wight, Michael G Baker, Jackie Benschop
Software Mentions: 14
Published: about 4 years ago

10.1186/s13071-017-2054-3

GIS-supported epidemiological analysis on canine Angiostrongylus vasorum and Crenosoma vulpis infections in Germany
Cited by: 41
Author(s): Pavlo Maksimov, Carlos Hermosilla, Anja Taubert, Christoph Staubach, Carola Sauter‐Louis, Franz Josef Conraths, Majda Globokar Vrhovec, Nikola Pantchev
Software Mentions: 12
Published: over 7 years ago

10.1200/PO.20.00158

Breakthrough Cancer Pain Clinical Features and Differential Opioids Response: A Machine Learning Approach in Patients With Cancer From the IOPS-MS Study
Cited by: 9
Author(s): Francesco Pantano, Tea Zeppola, Angelo Onorato, Michele Iuliani, Sonia Simonetti, Bruno Vincenzi, Daniele Santini, Sebastiano Mercadante, Paolo Marchetti, Arturo Cuomo, Augusto Caraceni, Rocco Domenico Mediati, Renato Vellucci, Massimo Mammucari, Silvia Natoli, Marzia Lazzari, Mario Dauri, Claudio Adile, Mario Airoldi, Giuseppe Azzarello, Livio Blasi, Bruno Chiurazzi, Daniela Degiovanni, Flavio Fusco, Vittorio Guardamagna, Simeone Liguori, Liana Palermo, Sergio Mameli, Francesco Masedu, Teresita Mazzei, Rita Maria Melotti, Valentino Menardo, Danilo Miotti, S. Moroso, Gaetano Pascoletti, Stefano De Santis, Remo Orsetti, Alfonso Papa, Sergio Ricci, E. Scelzi, Michele Sofia, Federica Aielli, Alessandro Valle, Giuseppe Tonini
Software Mentions: 12
Published: about 4 years ago

10.3389/fsufs.2020.561517

Predictive Models May Complement or Provide an Alternative to Existing Strategies for Assessing the Enteric Pathogen Contamination Status of Northeastern Streams Used to Provide Water for Produce Production
Cited by: 19
Author(s): Daniel Weller, Tanzy Love, Alexandra Belias, Martin Wiedmann
Software Mentions: 12
Published: about 4 years ago

10.1186/s40560-021-00531-1

Development and validation of an online model to predict critical COVID-19 with immune-inflammatory parameters
Cited by: 7
Author(s): Yue Gao, Lingxi Chen, Jianhua Chi, Shaoqing Zeng, Xikang Feng, Huayi Li, Dan Liŭ, Xiang Feng, Siyuan Wang, Ya Wang, Rui Yu, Yuan Yuan, Sen Xu, Chunrui Li, Wei Zhang, Shuai Cheng Li, Qinglei Gao
Software Mentions: 12
Published: almost 4 years ago

10.1017/S0950268820000746

Risk of bacteremia in patients presenting with shaking chills and vomiting - a prospective cohort study
Cited by: 2
Author(s): Madlene Holmqvist, Malin Inghammar, Lisa I. Påhlman, John H. Boyd, Per Åkesson, Adam Linder, Fredrik Kahn
Software Mentions: 10
Published: almost 5 years ago

10.1186/s12859-016-0997-6

Unaccounted uncertainty from qPCR efficiency estimates entails uncontrolled false positive rates
Cited by: 5
Author(s): Anders Ellern Bilgrau, Steffen Falgreen, Anders Petersen, Malene Krag Kjeldsen, Julie Støve Bødker, Hans Erik Johnsen, Karen Dybkær, Martin Bøgsted
Software Mentions: 10
Published: over 8 years ago

10.1371/journal.pone.0254394

Claims-based algorithms for common chronic conditions were efficiently constructed using machine learning methods
Cited by: 0
Author(s): Kozo Hara, Yasuki Kobayashi, Jun Tomio, Yuki Ito, Thomas Svensson, Ryo Ikesu, Ung‐il Chung, Akiko Kishi Svensson
Software Mentions: 10
Published: about 3 years ago

10.3390/v13060962

Evaluation of Dried Blood Spot Testing for SARS-CoV-2 Serology Using a Quantitative Commercial Assay
Cited by: 15
Author(s): Davor Brinc, Mia J Biondi, Daniel Li, Hao Sun, Camelia Capraru, David Smookler, Muhammad Atif Zahoor, Joseph R. Casey, Vathany Kulasingam, Jordan J. Feld
Software Mentions: 9
Published: over 3 years ago

10.1186/s13071-017-2394-z

West Nile virus host-vector-pathogen interactions in a colonial raptor
Cited by: 6
Author(s): Zoltán Soltész, Károly Erdélyi, Tamás Bakonyi, Mónika Barna, Katalin Szentpáli-Gavallér, Szabolcs Solt, Éva Horváth, Péter Palatitz, László Kotymán, Ádám Dán, Lâszlö Papp, Andrea Harnos, Péter Fehérvári
Software Mentions: 9
Published: about 7 years ago

10.1136/bmjopen-2020-040132

Prediction of perinatal death using machine learning models: a birth registry-based cohort study in northern Tanzania
Cited by: 27
Author(s): Innocent B. Mboya, Michael Johnson Mahande, Mohanad Mohammed, Joseph Obure, Henry Mwambi
Software Mentions: 8
Published: about 4 years ago

10.1128/mBio.01018-16

Looking for a Signal in the Noise: Revisiting Obesity and the Microbiome
Cited by: 396
Author(s): Marc A. Sze, Patrick D. Schloss
Software Mentions: 8
Published: about 8 years ago

10.3390/microorganisms9020227

Use of Network Analysis and Spread Models to Target Control Actions for Bovine Tuberculosis in a State from Brazil
Cited by: 4
Author(s): Nicolás Céspedes Cárdenas, Pilar Pozo, Francisco Paulo Nunes Lopes, José Henrique Hildebrand Grisi-Filho, Julio Álvarez
Software Mentions: 7
Published: almost 4 years ago

10.1186/s12888-021-03501-x

Validation of case definitions of depression derived from administrative data against the CIDI-SF as reference standard: results from the PROspective Québec (PROQ) study
Cited by: 3
Author(s): Ana Paula Bruno Pena-Gralle, Denis Talbot, Xavier Trudel, Karine Aubé, Alain Lesage, Sophie Lauzier, Alain Milot, Chantal Brisson
Software Mentions: 7
Published: about 3 years ago

10.1186/s40425-018-0326-x

Measuring multiple parameters of CD8+ tumor-infiltrating lymphocytes in human cancers by image analysis
Cited by: 67
Author(s): Keith Steele, Tze Heng Tan, R Korn, Karma Dacosta, Charles O. Brown, Michael Kuziora, Johannes Zimmermann, Brian Laffin, Moritz Widmaier, Lorenz Rognoni, Rubén Cárdenes, Katrin Schneider, Anmarie Boutrin, Philip Martin, Jiping Zha, Tobias Wiestler
Software Mentions: 7
Published: over 6 years ago

10.3390/jcm8081128

NEWS2 is Superior to qSOFA in Detecting Sepsis with Organ Dysfunction in the Emergency Department
Cited by: 60
Author(s): Lisa Mellhammar, Adam Linder, Jonas Tverring, Bértil Christensson, John H. Boyd, Parham Sendi, Per Åkesson, Fredrik Kahn
Software Mentions: 7
Published: over 5 years ago

10.1038/s41431-020-0675-z

Evaluation of CNV detection tools for NGS panel data in genetic diagnostics
Cited by: 63
Author(s): José Marcos Moreno-Cabrera, Jesús Del Valle, Elisabeth Castellanos, Lídia Feliubadaló, Marta Pineda, Joan Brunet, Eduard Serra, Gabriel Capellá, Conxi Lázaro, Bernat Gel
Software Mentions: 7
Published: over 4 years ago

10.3389/fgene.2019.00447

Leveraging Fecal Bacterial Survey Data to Predict Colorectal Tumors
Cited by: 11
Author(s): Bangzhou Zhang, Shuaimei Xu, Wei Xu, Qiongyun Chen, Zhangran Chen, Changsheng Yan, Yanyun Fan, Huangkai Zhang, Qi Liu, Jie Yang, Jinfeng Yang, Chuanxing Xiao, Hui Xu, Jianlin Ren
Software Mentions: 6
Published: over 5 years ago

10.3390/tropicalmed6030169

Hantaviruses in Agricultural and Forestry Workers: Knowledge, Attitudes and Practices in Italian Physicians
Cited by: 5
Author(s): Matteo Riccò, Pietro Ferraro, Simona Peruzzi, Federica Balzarini, Silvia Ranzieri
Software Mentions: 6
Published: about 3 years ago

10.3390/tropicalmed6030116

Public Perceptions on Non-Pharmaceutical Interventions for West Nile Virus Infections: A Survey from an Endemic Area in Northern Italy
Cited by: 9
Author(s): Matteo Riccò, Simona Peruzzi, Federica Balzarini
Software Mentions: 6
Published: over 3 years ago

10.3390/tropicalmed6020061

Epidemiology of West Nile Virus Infections in Humans, Italy, 2012–2020: A Summary of Available Evidences
Cited by: 22
Author(s): Matteo Riccò, Simona Peruzzi, Federica Balzarini
Software Mentions: 6
Published: over 3 years ago

10.3389/fonc.2021.698198

Interactions Between Adiponectin-Pathway Polymorphisms and Obesity on Postmenopausal Breast Cancer Risk Among African American Women: The WHI SHARe Study
Cited by: 3
Author(s): Gina Nam, Zuo-Feng Zhang, Jianyu Rao, Hua Zhou, Su Yon Jung
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0254366

A clinical prediction model to identify children at risk for revisits with serious illness to the emergency department: A prospective multicentre observational study
Cited by: 5
Author(s): Ruud Nijman, Dorine H. Borensztajn, Joany M Zachariasse, Carine Hajema, Paulo Freitas, Susanne Greber‐Platzer, Frank J Smit, Claudio F. Alves, Johan van der Lei, Ewout W. Steyerberg, Ian Maconochie, Henriëtte A. Moll
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pmed.1003084

Quantification of glucose-6-phosphate dehydrogenase activity by spectrophotometry: A systematic review and meta-analysis
Cited by: 29
Author(s): Daniel Pfeffer, Benedikt Ley, Rosalind E. Howes, Patrick Adu, Mohammad Shafiul Alam, Pooja Bansil, Yap Boum, Marcelo Augusto Mota Brito, Pimlak Charoenkwan, Archie Clements, Liwang Cui, Zeshuai Deng, OJ Egesie, Fe Esperanza Espino, Michael E. von Fricken, Muzamil Mahdi Abdel Hamid, Yongshu He, Gisela Henriques, Wasif Ali Khan, Nimol Khim, Saorin Kim, Marcus Lacerda, Chanthap Lon, Asrat Hailu Mekuria, Didier Ménard, Wuelton Marcelo Monteiro, François Nosten, Nwe Nwe Oo, Sampa Pal, Duangdao Palasuwan, Sunil Parikh, Ayodhia Pitaloka Pasaribu, Jeanne Rini Poespoprodjo, David J. Price, Arantxa Roca-Feltrer, Michelle E. Roh, David Saunders, Michele Spring, Inge Sutanto, Kamala Ley-Thriemer, Thomas A. Weppelmann, Lorenz von Seidlein, Ari Winasti Satyagraha, Germana Bancone, Gonzalo J. Domingo, Ric Price
Software Mentions: 6
Published: over 4 years ago

10.1186/s12890-021-01391-z

Development and validation of a nomogram to predict pulmonary function and the presence of chronic obstructive pulmonary disease in a Korean population
Cited by: 2
Author(s): Sang Chul Lee, Chansik An, Jongha Yoo, Sungho Park, Donggyo Shin, Chang Hoon Han
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-019-41103-6

Reconstructing foot-and-mouth disease outbreaks: a methods comparison of transmission network models
Cited by: 30
Author(s): Simon M. Firestone, Yoko Hayama, Richard Bradhurst, Takehisa Yamamoto, Toshiyuki Tsutsui, Mark Stevenson
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0235660

Transmission network reconstruction for foot-and-mouth disease outbreaks incorporating farm-level covariates
Cited by: 12
Author(s): Simon M. Firestone, Yoko Hayama, Max S. Y. Lau, Takehisa Yamamoto, Tatsuya Nishi, Richard Bradhurst, Haydar Demirhan, Mark Stevenson, Toshiyuki Tsutsui
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pntd.0005223

MLST-Based Population Genetic Analysis in a Global Context Reveals Clonality amongst Cryptococcus neoformans var. grubii VNI Isolates from HIV Patients in Southeastern Brazil
Cited by: 55
Author(s): Kennio Ferreira‐Paim, Leonardo Andrade-Silva, Fernanda Machado Fonseca, Thatiana Bragine Ferreira, Delio José Mora, Juliana Andrade-Silva, Aziza Khan, Aiken Dao, Eduardo C. Reis, Margarete Teresa Gottardo de Almeida, André Luiz Maltos, R. Virmondes, Luciana Trilles, Volker Rickerts, Ariya Chindamporn, Jane E. Sykes, Massimo Cogliati, Kirsten Nielsen, Teun Boekhout, Matthew C. Fisher, June Kwon‐Chung, David M. Engelthaler, Márcia dos Santos Lazéra, Wieland Meyer, Mário León Silva-Vergara
Software Mentions: 5
Published: almost 8 years ago

10.1371/journal.pone.0242879

Validation of models using basic parameters to differentiate intestinal tuberculosis from Crohn’s disease: A multicenter study from Asia
Cited by: 9
Author(s): Julajak Limsrivilai, Choon Kin Lee, Piyapan Prueksapanich, Kamin Harinwan, Asawin Sudcharoen, Natcha Cheewasereechon, Satimai Aniwan, Pimsiri Sripongpan, Panu Wetwittayakhlang, Ananya Pongpaibul, Anapat Sanpavat, Nonthalee Pausawasdi, Phunchai Charatcharoenwitthaya, Peter Higgins, Siew C. Ng
Software Mentions: 5
Published: almost 4 years ago

10.1186/s12917-017-1145-x

Estimation of the sensitivity and specificity of two serum ELISAs and one fecal qPCR for diagnosis of paratuberculosis in sub-clinically infected young-adult French sheep using latent class Bayesian modeling
Cited by: 20
Author(s): Yoann Mathevon, Gilles Foucras, Rémy Falguières, Fabien Corbière
Software Mentions: 5
Published: over 7 years ago

10.1186/s12879-016-1702-0

The role of hand hygiene in controlling norovirus spread in nursing homes
Cited by: 21
Author(s): Rania Assab, Laura Temime
Software Mentions: 5
Published: over 8 years ago

10.1186/s12916-014-0120-7

The association between the ratio of monocytes:lymphocytes at age 3 months and risk of tuberculosis (TB) in the first two years of life
Cited by: 74
Author(s): Vivek Naranbhai, Soyeon Kim, Helen A. Fletcher, Mark F. Cotton, Avy Violari, Charles D. Mitchell, Sharon Nachman, George McSherry, Helen McShane, Adrian V. S. Hill, Shabir А. Madhi
Software Mentions: 5
Published: over 10 years ago

10.2807/1560-7917.ES.2019.24.49.1900220

Estimating the effect of the 2005 change in BCG policy in England: a retrospective cohort study, 2000 to 2015
Cited by: 3
Author(s): Sam Abbott, Hannah Christensen, Nicky J Welton, Ellen Brooks-Pollock
Software Mentions: 5
Published: almost 5 years ago

10.1155/2018/8236575

The Role of Polymorphonuclear Leukocyte Counts from Urethra, Cervix, and Vaginal Wet Mount in Diagnosis of Nongonococcal Lower Genital Tract Infection
Cited by: 3
Author(s): Ivana Randjelovic, Amir Moghaddam, Birgitte Freiesleben de Blasio, Harald Moi
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0229800

Pre-/analytical factors affecting whole blood and plasma glucose concentrations in loggerhead sea turtles (Caretta caretta)
Cited by: 7
Author(s): P Kunze, Justin R. Perrault, Yu‐Mei Chang, Charles A. Manire, Samantha Clark, Nicole I. Stacy
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0106381

Diagnostic Accuracy of Computer-Aided Detection of Pulmonary Tuberculosis in Chest Radiographs: A Validation Study from Sub-Saharan Africa
Cited by: 71
Author(s): Marianne Breuninger, Bram van Ginneken, Rick H. H. M. Philipsen, Francis Mhimbira, Jerry Hella, Fred Lwilla, Jan van den Hombergh, Amanda Ross, Levan Jugheli, Dirk Wagner, Klaus Reither
Software Mentions: 5
Published: about 10 years ago

10.1371/journal.pone.0244829

Whole-genome sequence analysis and comparisons between drug-resistance mutations and minimum inhibitory concentrations of Mycobacterium tuberculosis isolates causing M/XDR-TB
Cited by: 16
Author(s): Ditthawat Nonghanphithak, Orawee Kaewprasert, Pratchakan Chaiyachat, Wipa Reechaipichitkul, Angkana Chaiprasert, Kiatichai Faksri
Software Mentions: 5
Published: almost 4 years ago

10.3390/ijerph18041370

Anhedonia as a Potential Risk Factor of Alzheimer’s Disease in a Community-Dwelling Elderly Sample: Results from the ZARADEMP Project
Cited by: 2
Author(s): David Vaquero-Puyuelo, Concepción De‐la‐Cámara, Beatriz Olaya, Patricia Gracia-García, António Lobo, Raúl López-Antón, Javier Santabárbara
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0187906

The interplay of various sources of noise on reliability of species distribution models hinges on ecological specialisation
Cited by: 30
Author(s): Alaaeldin Soultan, Kamran Safi
Software Mentions: 4
Published: about 7 years ago

10.1002/lary.21825

Systematic review and meta‐analyses of randomized controlled trials examining tinnitus management
Cited by: 204
Author(s): Derek J. Hoare, Victoria L. Kowalkowski, Sujin Kang, Deborah A. Hall
Software Mentions: 4
Published: over 13 years ago

10.3325/cmj.2020.61.289

From apparent to true – from frequency to distributions (I)
Cited by: 1
Author(s): Branimir K. Hackenberger
Software Mentions: 4
Published: over 4 years ago

10.1186/s12955-021-01736-6

Validation of the Portuguese version of Amsterdam Preoperative Anxiety and Information Scale (APAIS)
Cited by: 6
Author(s): Sandra Maurício, Isabel Rebêlo, Catarina Madeira, Filipa Resende, Susana Esteves
Software Mentions: 4
Published: over 3 years ago

10.1007/s00330-019-06167-y

Application of a deep learning algorithm for detection and visualization of hip fractures on plain pelvic radiographs
Cited by: 164
Author(s): Chi‐Tung Cheng, Tsung-Ying Ho, Tao-Yi Lee, Ching-Fang Chang, Ching-Cheng Chou, Chih-Chi Chen, I‐Fang Chung, Chien‐Hung Liao
Software Mentions: 4
Published: over 5 years ago

10.1186/s12957-021-02391-3

Axillary ultrasound and fine-needle aspiration cytology to predict clinically relevant nodal burden in breast cancer patients
Cited by: 3
Author(s): Isabela Panzeri Carlotti Buzatto, Francisco José Cândido dos Reis, Jurandyr Moreira de Andrade, Tamara Cristina Gomes Ferraz Rodrigues, Jéssica Maria Camargo Borba, Amanda Homse Netto, Marina Sconzo Polydoro, Daniel Guimarães Tiezzi
Software Mentions: 4
Published: about 3 years ago

10.1038/s41598-019-54575-3

Diagnostic performance of hematological discrimination indices to discriminate between βeta thalassemia trait and iron deficiency anemia and using cluster analysis: Introducing two new indices tested in Iranian population
Cited by: 19
Author(s): Mina Jahangiri, Fakher Rahim, Amal Saki Malehi
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41598-020-58350-7

Diagnostic Uncertainty and the Epidemiology of Feline Foamy Virus in Pumas (Puma concolor)
Cited by: 8
Author(s): Nicholas G. Dannemiller, Sarah Kechejian, Simona Kraberger, Kenneth A. Logan, Mathew W. Alldredge, Kevin R. Crooks, Sue VandeWoude, Scott Carver
Software Mentions: 4
Published: almost 5 years ago

10.1136/oemed-2016-103895

Risk factors for leptospirosis seropositivity in slaughterhouse workers in western Kenya
Cited by: 26
Author(s): Elizabeth A. J. Cook, William A. de Glanville, Lian F. Thomas, Samuel Kariuki, Barend M. deC. Bronsvoort, Eric M. Fèvre
Software Mentions: 4
Published: almost 8 years ago

10.1093/infdis/jit494

Ratio of Monocytes to Lymphocytes in Peripheral Blood Identifies Adults at Risk of Incident Tuberculosis Among HIV-Infected Adults Initiating Antiretroviral Therapy
Cited by: 95
Author(s): Vivek Naranbhai, Adrian V. S. Hill, Salim S. Abdool Karim, Kogieleum Naidoo, George M. Warimwe, Helen McShane, Helen A. Fletcher
Software Mentions: 4
Published: about 11 years ago

10.7554/eLife.41023

Potential herd protection against Plasmodium falciparum infections conferred by mass antimalarial drug administrations
Cited by: 14
Author(s): Daniel M. Parker, Sai Thein Than Tun, Lisa J. White, Ladda Kajeechiwa, May Myo Thwin, Jordi Landier, Victor Chaumeau, Vincent Corbel, Arjen M. Dondorp, Lorenz von Seidlein, Nicholas J. White, Richard J. Maude, François Nosten
Software Mentions: 4
Published: over 5 years ago

10.18632/oncotarget.24906

Glucose transporter 1 expression as a marker of prognosis in oesophageal adenocarcinoma
Cited by: 12
Author(s): Jaine K. Blayney, Lauren Cairns, Gerald Li, Niamh McCabe, Leanne Stevenson, Christopher J. Peters, N. Reid, Veronica J. Spence, Chintapuza Chisambo, Damian McManus, Jacqueline James, Stephen McQuaid, Stephanie G. Craig, Ken Arthur, Darragh G. McArt, Chin-Ann Johnny Ong, Pierre Lao–Sirieix, Peter Hamilton, Manuel Salto-Tellez, Martin Eatock, Helen Coleman, Rebecca C. Fitzgerald, Richard D. Kennedy, Richard Turkington, Oesophageal Cancer Clinical
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pmed.1002697

Automated detection of moderate and large pneumothorax on frontal chest X-rays using deep convolutional neural networks: A retrospective study
Cited by: 146
Author(s): Andrew G. Taylor, Clinton Mielke, John Mongan
Software Mentions: 4
Published: about 6 years ago

10.1186/s13722-019-0152-6

Short screening tools for risky drinking in Aboriginal and Torres Strait Islander Australians: modified AUDIT-C and a new approach
Cited by: 13
Author(s): K. S. Kylie Lee, James H. Conigrave, Scott Wilson, Jimmy Perry, Sarah Callinan, Robin Room, Tanya Chikritzhs, Tim Slade, Noel Hayman, Geoffrey Leggat, Katherine M. Conigrave
Software Mentions: 4
Published: over 5 years ago

10.1186/s12917-020-02376-6

A case-control study to identify risk factors for adult-onset idiopathic megaoesophagus in Australian dogs, 2017–2018
Cited by: 2
Author(s): Michelle Renwick, Mark Stevenson, Anke Wiethoelter, Caroline Mansfield
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0212544

Genetic improvement of hip-extended scores in 3 breeds of guide dogs using estimated breeding values: Notable progress but more improvement is needed
Cited by: 16
Author(s): Eldin A. Leighton, Dolores M. Holle, Darryl N. Biery, Thomas P. Gregor, Mischa B. McDonald-Lynch, Mandy L. Wallace, Jennifer K. Reagan, Gail K. Smith
Software Mentions: 4
Published: almost 6 years ago

10.3390/pathogens10081043

Survey of Ticks and Tick-Borne Rickettsial and Protozoan Pathogens in Eswatini
Cited by: 10
Author(s): Kimberly J. Ledger, Lorenza Béati, Samantha M. Wisely
Software Mentions: 3
Published: over 3 years ago

10.3390/ijerph16050747

Cost of Sickness Absenteeism during Seasonal Influenza Outbreaks of Medium Intensity among Health Care Workers
Cited by: 27
Author(s): Maria Michela Gianino, Gianfranco Politano, Antonio Scarmozzino, Michela Stillo, Viola Amprino, Stefano Di Carlo, Alfredo Benso, Carla Maria Zotti
Software Mentions: 3
Published: over 5 years ago

10.1093/molbev/msu397

Pooled Sequencing and Rare Variant Association Tests for Identifying the Determinants of Emerging Drug Resistance in Malaria Parasites
Cited by: 37
Author(s): Ian H. Cheeseman, Marina McDew-White, Aung Pyae Phyo, Kanlaya Sriprawat, François Nosten, Timothy J. Anderson
Software Mentions: 3
Published: almost 10 years ago

10.1007/s00268-018-4697-4

Prospective Risk Factor Analysis for the Development of Post-operative Urinary Retention Following Ambulatory General Surgery
Cited by: 21
Author(s): Alasdair Scott, Sam Mason, A. J. Langdon, Bhaveshkumar Patel, Erik Mayer, Krishna Moorthy, Sanjay Purkayastha
Software Mentions: 3
Published: over 6 years ago

10.3390/microorganisms9030642

High Efficacy of Saliva in Detecting SARS-CoV-2 by RT-PCR in Adults and Children
Cited by: 38
Author(s): Michael Huber, Peter W. Schreiber, Thomas Scheier, Annette Audigé, Roberto Buonomano, Alain Rudiger, Dominique L Braun, Gerhard Eich, Dagmar I. Keller, Barbara Hasse, Jürg Böni, Christoph Berger, Huldrych F Günthard, Amapola Manrique, Alexandra Trkola
Software Mentions: 3
Published: over 3 years ago

10.1016/S1473-3099(18)30791-6

Early transmission and case fatality of Ebola virus at the index site of the 2013–16 west African Ebola outbreak: a cross-sectional seroprevalence survey
Cited by: 17
Author(s): Joseph Timothy, Yper Hall, Joseph Akoi-Boré, Boubacar Diallo, Thomas Tipton, Hilary Bower, Thomas Strecker, Judith R. Glynn, Miles W. Carroll
Software Mentions: 3
Published: over 5 years ago

10.3390/jcm9061668

Using Machine Learning to Predict ICU Transfer in Hospitalized COVID-19 Patients
Cited by: 129
Author(s): Fu-Yuan Cheng, Himanshu Joshi, Pranai Tandon, Robert Freeman, David L. Reich, Madhu Mazumdar, Roopa Kohli‐Seth, Matthew A. Levin, Prem Timsina, Arash Kia
Software Mentions: 3
Published: over 4 years ago

10.1017/S0950268821001886

Prevalence and determinants of serum antibodies to SARS-CoV-2 in the general population of the Gardena valley
Cited by: 8
Author(s): Roberto Melotti, Federica Scaggiante, M. Falciani, Christian X. Weichenberger, Luisa Foco, Stefano Lombardo, Alessandro De Grandi, Dorothee von Laer, Angelika Mahlknecht, Peter P. Pramstaller, Elisabetta Pagani, Horand Meier, Timon Gaertner, Christina Troi, Deborah Mascalzoni, Cristian Pattaro, Michael Mian
Software Mentions: 3
Published: almost 4 years ago

10.3390/antibiotics10070800

Antimicrobial Usage in Commercial and Domestic Poultry Farming in Two Communities in the Ashanti Region of Ghana
Cited by: 15
Author(s): Ellis Kobina Paintsil, Linda Aurelia Ofori, Charity Wiafe Akenten, Dennis Fosu, S A Ofori, Maike Lamshöft, Jürgen May, Kwasi Obiri Danso, Ralf Krumkamp, Denise Dekker
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0182510

Estimation of sickness absenteeism among Italian healthcare workers during seasonal influenza epidemics
Cited by: 44
Author(s): Maria Michela Gianino, Gianfranco Politano, Antonio Scarmozzino, Lorena Charrier, Marco Testa, Sebastian Giacomelli, Alfredo Benso, Carla Maria Zotti
Software Mentions: 3
Published: over 7 years ago

10.1186/s13195-020-00713-3

Four subgroups based on tau levels in Alzheimer’s disease observed in two independent cohorts
Cited by: 17
Author(s): Flora H. Duits, Kirsten E. J. Wesenhagen, Laura L. Ekblad, E.Ch. Wolters, Eline A.J. Willemse, Philip Scheltens, Wiesje M. van der Flier, Charlotte E. Teunissen, Pieter Jelle Visser, Betty M. Tijms
Software Mentions: 3
Published: almost 4 years ago

10.1007/s10875-021-01005-7

A Minimal Parameter Set Facilitating Early Decision-making in the Diagnosis of Hemophagocytic Lymphohistiocytosis
Cited by: 7
Author(s): Bas M. Smits, Joris van Montfrans, Samuel A. Merrill, Lisette van de Corput, Mariëlle van Gijn, Andrica de Vries, Cor van den Bos, Floor Abbink, Renate G. van der Molen, Natasja Dors, Caroline A. Lindemans, Jaap Jan Boelens, Stefan Nierkens
Software Mentions: 3
Published: over 3 years ago

10.1007/s11282-017-0275-y

Combined photographic and ultrasonographic measurement of the ANB angle: a pilot study
Cited by: 7
Author(s): Alberto Di Blasio, Chiara Di Blasio, Giuseppe Pedrazzi, Diana Cassi, Marisabel Magnifico, Edoardo Manfredi, Mauro Gandolfini
Software Mentions: 3
Published: over 7 years ago

10.3389/fnins.2019.01037

Clustering the Brain With “CluB”: A New Toolbox for Quantitative Meta-Analysis of Neuroimaging Data
Cited by: 6
Author(s): Manuela Berlingeri, Francantonio Devoto, Francesca Gasparini, Aurora Saibene, Silvia Corchs, Lucia Clemente, L Danelli, Marcello Gallucci, Riccardo Borgoni, N. Alberto Borghese, Eraldo Paulesu
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-018-36654-z

EnABLe: An agent-based model to understand Listeria dynamics in food processing facilities
Cited by: 25
Author(s): Claire Zoellner, Rachel Jennings, Martin Wiedmann, Renata Ivanek
Software Mentions: 3
Published: almost 6 years ago

10.3389/fvets.2021.641488

Antibiotic Prescription in Veterinary Consultations in Bhutan: A Retrospective Cross-Sectional Study
Cited by: 1
Author(s): Juan Pablo Villanueva‐Cabezas, Karma Rinzin, Sithar Dorjee, Pema Tshewang, Ugyen Namgyel, Puspa Maya Sharma, Mark Stevenson, Jodie McVernon
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0258041

An evaluation of a FluoroSpot assay as a diagnostic tool to determine SARS-CoV-2 specific T cell responses
Cited by: 9
Author(s): Sara M. Mangsbo, Sebastian Havervall, Ida Laurén, Robin S. Lindsay, August Jernbom Falk, Ulrika Marking, Martin Lord, Marcus Buggert, Pierre Dönnes, Gustaf Christoffersson, Peter Nilsson, Sophia Hober, Mia Phillipson, Jonas Klingström, Charlotte Thålin
Software Mentions: 3
Published: about 3 years ago

10.3390/cancers13184638

Reproducibility of CT-Based Hepatocellular Carcinoma Radiomic Features across Different Contrast Imaging Phases: A Proof of Concept on SORAMIC Trial Data
Cited by: 7
Author(s): Abdalla Ibrahim, Yousif Widaatalla, Sergey Primakov, Razvan L. Miclea, Osman Öcal, Matthias P. Fabritius, Michael Ingrisch, Jens Ricke, Roland Hustinx, Felix M. Mottaghy, Henry C. Woodruff, Max Seidensticker, Philippe Lambin
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0224825

Evaluation of upper limb superficial venous percussion as a sign of anatomical location and venous permeability. A comparative study of superficial venous percussion to ultrasound findings on non-renal patients and on chronic kidney disease patients
Cited by: 0
Author(s): Pedro Coelho Nogueira Diógenes, Aline Naiara Azevedo da Silva, Fausto Pierdoná Gúzen, Marco Aurélio M. Freire, José Rodolfo Lopes de Paiva Cavalcanti
Software Mentions: 3
Published: about 5 years ago

10.1186/s40104-020-00455-0

The use of milk Fourier transform mid-infrared spectra and milk yield to estimate heat production as a measure of efficiency of dairy cows
Cited by: 7
Author(s): Sadjad Danesh Mesgaran, Anja Eggert, Peter Höckels, M. Derno, Björn Kuhla
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-017-05623-3

Association Of Plasma And Urinary Mutant DNA With Clinical Outcomes In Muscle Invasive Bladder Cancer
Cited by: 66
Author(s): Keval Patel, Kristan E. van der Vos, Christopher G. Smith, Florent Moulière, Dana W.Y. Tsui, James A. Morris, Dineika Chandrananda, Francesco Marass, Daan van den Broek, DE Neal, Vincent Gnanapragasam, Tim Forshew, Bas W. van Rhijn, Charles E. Massie, Nitzan Rosenfeld, Michiel S. van der Heijden
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pntd.0008753

Development of a bio-inkjet printed LAMP test kit for detecting human African trypanosomiasis
Cited by: 6
Author(s): Kyoko Hayashida, Peter Nambala, Nick Van Reet, Philippe Büscher, Nobuyoshi Kawai, Mable Mutengo, Janelisa Musaya, Boniface Namangala, Chihiro Sugimoto, Junya Yamagishi
Software Mentions: 3
Published: about 4 years ago

10.1186/s12917-018-1667-x

The prevalence of Coxiella burnetii shedding in dairy goats at the time of parturition in an endemically infected enterprise and associated milk yield losses
Cited by: 16
Author(s): Jose Tobias Canevari, Simon M. Firestone, Gemma Vincent, Angus Campbell, Tabita Tan, Michael Muleme, A.W.N. Cameron, Mark Stevenson
Software Mentions: 3
Published: about 6 years ago

10.1186/s12917-014-0267-7

Feeding mastitis milk to organic dairy calves: effect on health and performance during suckling and on udder health at first calving
Cited by: 13
Author(s): Katharina Abb-Schwedler, Ariane Maeschli, Renate Boss, H.U. Graber, Adrian Steiner, Peter Klocke
Software Mentions: 3
Published: almost 10 years ago

10.1371/journal.pone.0140462

Validation of Pooled Whole-Genome Re-Sequencing in Arabidopsis lyrata
Cited by: 41
Author(s): Marco Fracassetti, Philippa C. Griffin, Yvonne Willi
Software Mentions: 3
Published: about 9 years ago

10.1186/s40959-021-00106-x

A retrospective analysis of cardiovascular adverse events associated with immune checkpoint inhibitors
Cited by: 12
Author(s): Jessica C. Lal, Sherry-Ann Brown, Patrick Collier, Feixiong Cheng
Software Mentions: 3
Published: over 3 years ago

10.1186/s12874-018-0569-8

A comparison of metrics and performance characteristics of different search strategies for article retrieval for a systematic review of the global epidemiology of kidney and urinary diseases
Cited by: 2
Author(s): Boris Bikbov, Norberto Perico, Giuseppe Remuzzi
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0044260

Plasma Based Markers of [11C] PiB-PET Brain Amyloid Burden
Cited by: 82
Author(s): Steven J. Kiddle, Madhav Thambisetty, Andrew Simmons, Joanna Riddoch-Contreras, Abdul Hye, Eric Westman, Ian Pike, Malcolm Ward, Caroline Johnston, Michelle K. Lupton, Katie Lunnon, Hilkka Soininen, Iwona Kłoszewska, Magda Tsolaki, Bruno Vellas, Patrizia Mecocci, Simon Lovestone, Stephen J. Newhouse, Richard Dobson, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 3
Published: about 12 years ago

10.1371/journal.pone.0197400

Prevalence and outcomes of proton pump inhibitor associated hypomagnesemia in chronic kidney disease
Cited by: 10
Author(s): Jane Hughes, Diana Chiu, P A Kalra, Darren Green
Software Mentions: 3
Published: over 6 years ago

10.1098/rsos.190149

Non-contact respiration monitoring using impulse radio ultrawideband radar in neonates
Cited by: 39
Author(s): Jong Deok Kim, Won Hyuk Lee, Yong-Gu Lee, Hyun Ju Lee, Teahyen Cha, Seung Hyun Kim, Ki Min Song, Young‐Hyo Lim, Seok Hyun Cho, Sung Ho Cho, Hyun Kyung Park
Software Mentions: 3
Published: over 5 years ago

10.3390/biology10060465

GWAS Links New Variant in Long Non-Coding RNA LINC02006 with Colorectal Cancer Susceptibility
Cited by: 4
Author(s): Ewa E. Hennig, Anna Kluska, Magdalena Piątkowska, Maria Kulecka, Aneta Bałabas, Natalia Żeber‐Lubecka, Krzysztof Goryca, Filip Ambrożkiewicz, Jakub Karczmarski, Tomasz Olesiński, Łukasz Zyskowski, Jerzy Ostrowski
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0243939

Feasibility of non-contact cardiorespiratory monitoring using impulse-radio ultra-wideband radar in the neonatal intensive care unit
Cited by: 13
Author(s): Won Hyuk Lee, Yong-Gu Lee, Jae Yoon Na, Seung Hyun Kim, Hyun Ju Lee, Young‐Hyo Lim, Seok Hyun Cho, Sung Ho Cho
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13071-014-0583-6

A semi-automated magnetic capture probe based DNA extraction and real-time PCR method applied in the Swedish surveillance of Echinococcus multilocularis in red fox (Vulpes vulpes) faecal samples
Cited by: 58
Author(s): Mats Isaksson, Åsa Hagström, María Teresa Armúa-Fernández, Helene Wahlström, Erik Ågren, Andrea L. Miller, Anders Holmberg, Morten Lukacs, Adriano Casulli, Peter Deplazes, Mikael Juremalm
Software Mentions: 3
Published: almost 10 years ago

10.1186/s12913-020-05084-x

Determinants of aggression against all health care workers in a large-sized university hospital
Cited by: 18
Author(s): Elena Viottini, Gianfranco Politano, G Fornero, Pier Luigi Pavanelli, Paola Borelli, Marco Bonaudo, Maria Michela Gianino
Software Mentions: 3
Published: over 4 years ago

10.1186/s13071-017-2075-y

Serological evidence of exposure to Rickettsia felis and Rickettsia typhi in Australian veterinarians
Cited by: 21
Author(s): Yen Thon Teoh, Sze Fui Hii, Mark Stevenson, Stephen Graves, Robert Rees, John Stenos, Rebecca J. Traub
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-021-92304-x

Interaction between genetic predisposition, smoking, and dementia risk: a population-based cohort study
Cited by: 6
Author(s): Na Zhang, Janice M Ranson, Zhi‐Jie Zheng, Eilís Hannon, Zhenwei Zhou, Xuejun Kong, David J. Llewellyn, Dan King, Jie Huang
Software Mentions: 3
Published: over 3 years ago

10.1186/s40249-016-0157-2

Impact of co-infections with enteric pathogens on children suffering from acute diarrhea in southwest China
Cited by: 82
Author(s): Shunxian Zhang, Yongming Zhou, Wen Xu, Liqiao Tian, Jiaxu Chen, Shaohong Chen, Zhisheng Dang, Wenpeng Gu, Jianwen Yin, Emmanuel Serrano, Xiao‐Nong Zhou
Software Mentions: 3
Published: over 8 years ago

10.1186/s13071-018-2737-4

The epidemiology of Rickettsia felis infecting fleas of companion animals in eastern Australia
Cited by: 3
Author(s): Yen Thon Teoh, Sze Fui Hii, Stephen Graves, Robert Rees, John Stenos, Rebecca J. Traub
Software Mentions: 3
Published: over 6 years ago

10.3390/ijns7030059

First Year of TREC-Based National SCID Screening in Sweden
Cited by: 7
Author(s): Christina Göngrich, Olov Ekwall, Mikael Sundin, Nicholas Brodszki, Anders Fasth, Per Marits, Sam Dysting, Susanne Jönsson, Michela Barbaro, Anna Wedell, Ulrika von Döbeln, Rolf Zetterström
Software Mentions: 3
Published: about 3 years ago

10.3390/antibiotics10070797

Rapid Molecular Diagnosis of Tuberculosis and Its Resistance to Rifampicin and Isoniazid with Automated MDR/MTB ELITe MGB® Assay
Cited by: 1
Author(s): Vichita Ok, Alexandra Aubry, Florence Morel, Isabelle Bonnet, Jérôme Robert, Wladimir Sougakoff
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0218030

Elevated levels of eEF1A2 protein expression in triple negative breast cancer relate with poor prognosis
Cited by: 13
Author(s): Fabiola Giudici, Elisabetta Petracci, Oriana Nanni, Cristina Bottin, Maurizio Pinamonti, Fabrizio Zanconati, Bruna Scaggiante
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2020.618097

Development of a Fast SARS-CoV-2 IgG ELISA, Based on Receptor-Binding Domain, and Its Comparative Evaluation Using Temporally Segregated Samples From RT-PCR Positive Individuals
Cited by: 25
Author(s): Farha Mehdi, Souvick Chattopadhyay, Ramachandran Thiruvengadam, Yadav Sarla, Manjit Kumar, Sangita Kumari Sinha, Sandeep Goswami, Pallavi Kshetrapal, Nitya Wadhwa, Uma Chandramouli Natchu, Shailaja Sopory, Bapu Koundinya Desiraju, Anil Pandey, Asim Bikas Das, Nikhil N. Verma, Nandini Sharma, Pragya Sharma, Vandita Bhartia, Mudita Gosain, Rakesh Lodha, Urpo Lamminmäki, Tripti Shrivastava, Shinjini Bhatnagar, Gaurav Batra
Software Mentions: 2
Published: almost 4 years ago

10.3390/microorganisms9051106

Comparison of Quantification Methods to Estimate Farm-Level Usage of Antimicrobials Other than in Medicated Feed in Dairy Farms from Québec, Canada
Cited by: 10
Author(s): Hélène Lardé, David Francoz, Jean-Philippe Roy, Jonathan Massé, Marie Archambault, Marie-Ève Paradis, Simon Dufour
Software Mentions: 2
Published: over 3 years ago

10.3390/genes11040454

Exploring the Mechanisms of Multiple Insecticide Resistance in a Highly Plasmodium-Infected Malaria Vector Anopheles funestus Sensu Stricto from Sahel of Northern Nigeria
Cited by: 8
Author(s): Sulaiman S. Ibrahim, Muhammad Mahmood Mukhtar, Helen Irving, Jacob M. Riveron, Amen N. Fadel, Williams Tchapga, Jack Hearn, Abdullahi Muhammad, F Sarkinfada, Charles S. Wondji
Software Mentions: 2
Published: over 4 years ago

10.1080/20008686.2020.1794668

Monitoring results of wild boar (<i>Sus scrofa</i>) in The Netherlands: analyses of serological results and the first identification of <i>Brucella suis</i> biovar 2
Cited by: 5
Author(s): Peter van Tulden, José L. Gonzáles, M. V. Kroese, Marc Engelsma, Frido de Zwart, Dorota Szot, Yvette Bisselink, Marga van Hagen-van Setten, Miriam Koene, P.T.J. Willemsen, Hendrik Jan Roest, Joke van der Giessen
Software Mentions: 2
Published: almost 5 years ago

Projects: cran: epiR

Papers Mentioning epiR 199