Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: dtangle

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/dtangle

Cell Type Deconvolution from Gene Expressions
4 versions
Latest release: almost 5 years ago
254 downloads last month

Papers Mentioning dtangle 6

10.1186/s12859-021-03970-7
stochprofML: stochastic profiling using maximum likelihood estimation in R
Cited by: 3
Author(s): Lisa Amrhein, Christiane Fuchs
Software Mentions: 14
Published: over 3 years ago
10.1186/s12864-020-06888-1
A deconvolution method and its application in analyzing the cellular fractions in acute myeloid leukemia samples
Cited by: 6
Author(s): Huamei Li, Ingo G. H. Schmidt‐Wolf, Wenglong Ming, Xiao Sun, Hongde Liu
Software Mentions: 7
Published: about 4 years ago
10.3389/fgene.2020.00392
DeconPeaker, a Deconvolution Model to Identify Cell Types Based on Chromatin Accessibility in ATAC-Seq Data of Mixture Samples
Cited by: 20
Author(s): Huamei Li, Ingo G. H. Schmidt‐Wolf, Kun Luo, Zhaohui S. Qin, Xiao Sun, Hongde Liu
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pcbi.1008120
Deconvolving the contributions of cell-type heterogeneity on cortical gene expression
Cited by: 62
Author(s): Ellis Patrick, Mariko Taga, Ayla Ergün, Bernard Ng, William Casazza, Maria Cimpean, Christina J. Yung, Julie A. Schneider, David A. Bennett, Chris Gaiteri, Philip L. De Jager, Elizabeth M. Bradshaw, Sara Mostafavi
Software Mentions: 4
Published: over 4 years ago
10.1093/gigascience/giab002
The Gene Expression Deconvolution Interactive Tool (GEDIT): accurate cell type quantification from gene expression data
Cited by: 26
Author(s): Brian B. Nadel, David Lopez, Dennis Montoya, Feiyang Ma, Hannah Waddel, Misha M Khan, Serghei Mangul, Matteo Pellegrini
Software Mentions: 4
Published: almost 4 years ago
10.3390/genes12060935
Comprehensive Analysis of RNA Expression Correlations between Biofluids and Human Tissues
Cited by: 1
Author(s): Ruya Sun, Chunmei Cui, Yuan Zhou, Qinghua Cui
Software Mentions: 1
Published: over 3 years ago