Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: doc2vec

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/doc2vec

Distributed Representations of Sentences, Documents and Topics
3 versions
Latest release: over 3 years ago
727 downloads last month

Papers Mentioning doc2vec 27

A Novel Machine Learning Framework for Comparison of Viral COVID-19–Related Sina Weibo and Twitter Posts: Workflow Development and Content Analysis
Cited by: 7
Author(s): Shi Chen, Lina Zhou, Yunya Song, Qian Xu, Ping Wang, Kanlun Wang, Yaorong Ge, Daniel Janies
Software Mentions: 15
Published: over 3 years ago

10.1371/journal.pone.0224452

Comparative analysis on Facebook post interaction using DNN, ELM and LSTM
Cited by: 8
Author(s): Sabih Ahmad Khan, Hsien-Tsung Chang
Software Mentions: 9
Published: almost 5 years ago

10.3389/fimmu.2021.680687

Immune2vec: Embedding B/T Cell Receptor Sequences in ℝN Using Natural Language Processing
Cited by: 21
Author(s): Miri Ostrovsky-Berman, Boaz Frankel, Pazit Polak, Gur Yaari
Software Mentions: 9
Published: about 3 years ago

10.1371/journal.pcbi.1009302

Crowdsourced identification of multi-target kinase inhibitors for RET- and TAU- based disease: The Multi-Targeting Drug DREAM Challenge
Cited by: 5
Author(s): Zhitao Xiong, Minji Jeon, Robert J. Allaway, Jaewoo Kang, Donghyeon Park, Jinhyuk Lee, Hwisang Jeon, Miyoung Ko, Hualiang Jiang, Mingyue Zheng, Aik Choon Tan, Xindi Guo, Multi-Targeting Drug Dream Challenge Community, Kristen K. Dang, Alex Tropsha, Chana Hecht, Tirtha K. Das, Heather A. Carlson, Ruben Abagyan, Justin Guinney, Avner Schlessinger, Ross L. Cagan
Software Mentions: 7
Published: about 3 years ago

10.3390/s21092893

Automatic Correction of Real-Word Errors in Spanish Clinical Texts
Cited by: 9
Author(s): Daniel Bravo-Candel, Jésica López-Hernández, José Antonio García-Díaz, Fernando Molina-Molina, Francisco Garcı́a-Sánchez
Software Mentions: 7
Published: over 3 years ago

10.1007/s10994-020-05890-8

Propositionalization and embeddings: two sides of the same coin
Cited by: 20
Author(s): Nada Lavrač, Blaž Škrlj, Marko Robnik–Šikonja
Software Mentions: 6
Published: about 4 years ago

10.3390/s21113747

Multi-Criteria Recommendation Systems to Foster Online Grocery
Cited by: 3
Author(s): Manar Mohamed Hafez, Rebeca P. Díaz Redondo, Ana Fernández Vilas, Héctor Olivera Pazó
Software Mentions: 5
Published: over 3 years ago

10.3389/fncom.2020.603765

WGEVIA: A Graph Level Embedding Method for Microcircuit Data
Cited by: 1
Author(s): Xiaomin Wu, Shuvra S. Bhattacharyya, Rong Chen
Software Mentions: 5
Published: over 3 years ago

10.3390/e20120923

A Bayesian Failure Prediction Network Based on Text Sequence Mining and Clustering
Cited by: 9
Author(s): Wenbing Chang, Zhenzhong Xu, You Meng, Shenghan Zhou, Yiyong Xiao, Yang Cheng
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pcbi.1006721

16S rRNA sequence embeddings: Meaningful numeric feature representations of nucleotide sequences that are convenient for downstream analyses
Cited by: 26
Author(s): Stephen Woloszynek, Zhengqiao Zhao, Jian Chen, Gail Rosen
Software Mentions: 4
Published: over 5 years ago

10.2196/22422

Deep Neural Network for Reducing the Screening Workload in Systematic Reviews for Clinical Guidelines: Algorithm Validation Study
Cited by: 9
Author(s): Tomohide Yamada, Daisuke Yoneoka, Yuta Hiraike, Kimihiro Hino, Hiroyoshi Toyoshiba, Akira Shishido, Hisashi Noma, Nobuhiro Shojima, Toshimasa Yamauchi
Software Mentions: 4
Published: over 3 years ago

10.3389/fdata.2019.00002

Deep Representation Learning for Social Network Analysis
Cited by: 39
Author(s): Qiaoyu Tan, Ninghao Liu, Xia Hu
Software Mentions: 4
Published: over 5 years ago

10.3390/e21111078

Tweets Classification on the Base of Sentiments for US Airline Companies
Cited by: 103
Author(s): Furqan Rustam, Imran Ashraf, Arif Mehmood, Saleem Ullah, Gyu Sang Choi
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0212103

Automating the search for a patent’s prior art with a full text similarity search
Cited by: 31
Author(s): Lea Helmers, Franziska Horn, Franziska Biegler, Tim Oppermann, Klaus Robert Müller
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0234880

The proximity of ideas: An analysis of patent text using machine learning
Cited by: 12
Author(s): Shuijuan Feng
Software Mentions: 3
Published: about 4 years ago

10.1186/s13637-017-0057-1

Autism spectrum disorder detection from semi-structured and unstructured medical data
Cited by: 32
Author(s): Jianbo Yuan, Chester Holtz, Tristram Smith, Jiebo Luo
Software Mentions: 3
Published: almost 8 years ago

10.3390/biology9100325

Machine Learning Model for Identifying Antioxidant Proteins Using Features Calculated from Primary Sequences
Cited by: 41
Author(s): Luu Ho Thanh Lam, Ngoc Le, Ле Ван Туан, Tran Thanh Tri, Truong Nguyen Khanh Hung, Ngan Thi Kim Nguyen, Luong Huu Dang, Nguyen Quoc Khanh Le
Software Mentions: 3
Published: almost 4 years ago

10.3389/fpsyg.2021.668344

A Pseudo-Value Approach to Analyze the Semantic Similarity of the Speech of Children With and Without Autism Spectrum Disorder
Cited by: 4
Author(s): Joel Robert Adams, Alexandra C. Salem, Heather MacFarlane, Rosemary Ingham, Steven Bedrick, Éric Fombonne, Jill Dolata, Alison Presmanes Hill, Jan P. H. van Santen
Software Mentions: 3
Published: about 3 years ago

10.3390/ijms20051070

RPITER: A Hierarchical Deep Learning Framework for ncRNA–Protein Interaction Prediction
Cited by: 47
Author(s): Cheng Peng, Siyu Han, Hui Zhang, Ying Li
Software Mentions: 3
Published: over 5 years ago

10.3390/s20123348

Soft Sensor with Deep Learning for Functional Region Detection in Urban Environments
Cited by: 5
Author(s): Yicao Ma, Shifeng Liu, Gang Xue, Daqing Gong
Software Mentions: 2
Published: over 4 years ago

10.1140/epjds/s13688-018-0176-2

Home is where the ad is: online interest proxies housing demand
Cited by: 7
Author(s): Marco Pangallo, Michele Loberto
Software Mentions: 2
Published: almost 6 years ago

10.3390/s19020234

Fuzzy Ontology and LSTM-based Text Mining: A Transportation Network Monitoring System for Assisting Travel
Cited by: 60
Author(s): Farman Ali, Shaker El–Sappagh, Daehan Kwak
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj-cs.677

Topic2features: a novel framework to classify noisy and sparse textual data using LDA topic distributions
Cited by: 6
Author(s): Junaid Abdul Wahid, Lei Shi, Yufei Gao, Beifang Yang, Yongcai Tao, Lin Wei, Shabir Hussain
Software Mentions: 1
Published: about 3 years ago

10.1038/s41598-021-85274-7

Antibody design using LSTM based deep generative model from phage display library for affinity maturation
Cited by: 52
Author(s): Koichiro Saka, Taro Kakuzaki, Shoichi Metsugi, Daiki Kashiwagi, Kenji Yoshida, Manabu Wada, Hiroyuki Tsunoda, Reiji Teramoto
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-018-26392-7

PhosContext2vec: a distributed representation of residue-level sequence contexts and its application to general and kinase-specific phosphorylation site prediction
Cited by: 25
Author(s): Ying Xu, Jiangning Song, Campbell Wilson, James C. Whisstock
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0227930

SAO2Vec: Development of an algorithm for embedding the subject–action–object (SAO) structure using Doc2Vec
Cited by: 16
Author(s): Sunhye Kim, Inchae Park, Byungun Yoon
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules25194372

LncMirNet: Predicting LncRNA–miRNA Interaction Based on Deep Learning of Ribonucleic Acid Sequences
Cited by: 33
Author(s): Sen Yang, Yan Wang, Lin Yang, Dan Shao, Kaifei He, Lan Huang
Software Mentions: 1
Published: almost 4 years ago