cran: corrplot | Projects | Ecosyste.ms: Papers

10.1038/s41598-021-85921-z

Genome-wide association study and gene network analyses reveal potential candidate genes for high night temperature tolerance in rice
Cited by: 8
Author(s): Raju Bheemanahalli, Montana S. Knight, Cherryl Quiñones, Colleen J. Doherty
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-021-90177-8

Infection with Borrelia afzelii and manipulation of the egg surface microbiota have no effect on the fitness of immature Ixodes ricinus ticks
Cited by: 8
Author(s): Georgia Hurry, Elodie Maluenda, Anouk Sarr, Alessandro Belli, Phineas T. Hamilton, Olivier Duron, Olivier Plantard, Maarten J. Voordouw
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-021-92108-z

A combined biomarker approach for characterising extracellular matrix profiles in acute myocardial infarction
Cited by: 5
Author(s): Morgane M. Brunton-O’Sullivan, A. Holley, Kathryn Hally, Gisela A Kristono, Scott Harding, Peter Larsen
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-021-97767-6

Tetraploids expanded beyond the mountain niche of their diploid ancestors in the mixed-ploidy grass Festuca amethystina L.
Cited by: 9
Author(s): Marcin Kiedrzyński, Katarzyna M. Zielińska, Iwona Jędrzejczyk, Edyta Kiedrzyńska, Przemysław Piotr Tomczyk, Agnieszka Rewicz, Monika Rewers, Adrian Indreica, Iryna Bednarska, Владимир Ступар, Jan Roleček, Petr Šmarda
Software Mentions: 3
Published: about 3 years ago

10.1038/s41598-021-98637-x

TYROBP, TLR4 and ITGAM regulated macrophages polarization and immune checkpoints expression in osteosarcoma
Cited by: 19
Author(s): Tuo Liang, Jiarui Chen, Guoyong Xu, Zide Zhang, Jiang Xue, Huilan Zeng, Jie Jiang, Tianyou Chen, Zhaojie Qin, Hao Li, Zhen Ye, Yunfeng Nie, Chong Liu, Xinli Zhan
Software Mentions: 3
Published: about 3 years ago

10.3390/s19214814

Phenomic and Physiological Analysis of Salinity Effects on Lettuce
Cited by: 38
Author(s): Neil D. Adhikari, Ivan Šimko, Beiquan Mou
Software Mentions: 3
Published: about 5 years ago

10.1038/s41398-019-0391-z

Altered gut metabolome contributes to depression-like behaviors in rats exposed to chronic unpredictable mild stress
Cited by: 54
Author(s): Jianguo Li, Xiaojun Jia, Cui Wang, Changxin Wu, Xuemei Qin
Software Mentions: 3
Published: almost 6 years ago

10.1128/mBio.01793-16

Role of the ESCRT Complexes in Telomere Biology
Cited by: 9
Author(s): Anna K. Dieckmann, Vera Babin, Yaniv Harari, Roland Eils, Rainer König, Brian Luke, Martin Kupiec
Software Mentions: 3
Published: almost 8 years ago

10.1128/mBio.02016-18

Phenotypic Variability Correlates with Clinical Outcome in Cryptococcus Isolates Obtained from Botswanan HIV/AIDS Patients
Cited by: 48
Author(s): Kenya E. Fernandes, Adam Brockway, Miriam Haverkamp, Christina A. Cuomo, Ignacio Fuentes, John R. Perfect, Dee Carter
Software Mentions: 3
Published: about 6 years ago

10.1128/mSphere.00702-20

The Impact of Plasma Membrane Lipid Composition on Flagellum-Mediated Adhesion of Enterohemorrhagic Escherichia coli
Cited by: 11
Author(s): Hélène Cazzola, Laurine Lemaire, Sébastien Acket, Élise Prost, Luminita Duma, Marc Erhardt, Petra Čechová, Patrick Trouillas, Fady Mohareb, Claire Rossi, Yannick Rossez
Software Mentions: 3
Published: about 4 years ago

10.7150/jgen.38516

Draft Genome Sequences of Bifidobacterium animalis Consecutively Isolated from Healthy Japanese Individuals
Cited by: 0
Author(s): Tomoya Tsukimi, Tsubasa Watabe, Kazuki Tanaka, Mitsuhiko Sato, Haruo Suzuki, Masaru Tomita, Shinji Fukuda
Software Mentions: 3
Published: almost 5 years ago

10.7554/eLife.47172

HDX-MS reveals structural determinants for RORγ hyperactivation by synthetic agonists
Cited by: 10
Author(s): Timothy S. Strutzenberg, Rubén D. Garcia-Ordoñez, Scott J. Novick, HaJeung Park, Mi Ra Chang, Christelle Doebellin, Yuanjun He, Rémi Patouret, Theodore M. Kamenecka, Patrick R. Griffin
Software Mentions: 3
Published: over 5 years ago

10.3390/ijms21031159

Surgical Wound Fluids from Patients with Breast Cancer Reveal Similarities in the Biological Response Induced by Intraoperative Radiation Therapy and the Radiation-Induced Bystander Effect—Transcriptomic Approach
Cited by: 10
Author(s): Katarzyna Kulcenty, Igor Piotrowski, Marcin Ruciński, Joanna Wróblewska, Karol Jopek, Dawid Murawa, Wiktoria Maria Suchorska
Software Mentions: 3
Published: almost 5 years ago

10.3390/ijms21145056

Integrated Analysis of Tissue-Specific Promoter Methylation and Gene Expression Profile in Complex Diseases
Cited by: 8
Author(s): Kibaick Lee, Sanghoon Moon, Mi Jin Park, Insong Koh, Nak Hyeon Choi, Ho Yeong Yu, Young Jin Kim, Jinhwa Kong, Hee Gyung Kang, Song Cheol Kim, Bong-Jo Kim
Software Mentions: 3
Published: over 4 years ago

10.3390/ijms21249600

Increased miR-142 Levels in Plasma and Atherosclerotic Plaques from Peripheral Artery Disease Patients with Post-Surgery Cardiovascular Events
Cited by: 11
Author(s): Teodora Barbălată, Oriana E Moraru, Camelia S. Stancu, Yvan Devaux, Maya Simionescu, Anca V. Sima, Loredan S. Niculescu
Software Mentions: 3
Published: almost 4 years ago

10.3390/ijms22094317

Genome-Wide Identification, Comparison, and Expression Analysis of Transcription Factors in Ascidian Styela clava
Cited by: 2
Author(s): Jin Zhang, Jiankai Wei, Haiyan Yu, Bo Dong
Software Mentions: 3
Published: over 3 years ago

10.1016/j.jrp.2016.06.022

The personality of U.S. states: Stability from 1999 to 2015
Cited by: 71
Author(s): Lorien G. Elleman, David M Condon, Sarah E. Russin, William Revelle
Software Mentions: 3
Published: almost 7 years ago

10.3390/nu13051476

Longitudinal Changes in the Concentration of Major Human Milk Proteins in the First Six Months of Lactation and Their Effects on Infant Growth
Cited by: 13
Author(s): Jian Zhang, Aihua Zhao, Shiyun Lai, Qingbin Yuan, Xiaojiang Jia, Peiyu Wang, Yumei Zhang
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0095427

Modeling Hawaiian Ecosystem Degradation due to Invasive Plants under Current and Future Climates
Cited by: 51
Author(s): Adam E. Vorsino, Lucas B. Fortini, Fred Amidon, Stephen E. Miller, James D. Jacobi, Jonathan P. Price, Sam `Ohukani`ohi`a Gon, Gregory A. Koob
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0249280

Digital data-based strategies: A novel form of better understanding COVID-19 pandemic and international scientific collaboration
Cited by: 6
Author(s): Yan Wang, Henan Zhao
Software Mentions: 2
Published: over 3 years ago

10.1098/rsos.201961

Ecomorphological diversification of squamates in the Cretaceous
Cited by: 13
Author(s): Jorge A. Herrera-Flores, Thomas L. Stubbs, Michael J. Benton
Software Mentions: 2
Published: over 3 years ago

10.7717/peerj.9694

Effects of variation in forest fragment habitat on black howler monkey demography in the unprotected landscape around Palenque National Park, Mexico
Cited by: 5
Author(s): Keren Klass, Sarie Van Belle, Álvaro Campos-Villanueva, Fernando Mercado Malabet, Alejandro Estrada
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-021-85825-y

Time spent outdoors in childhood is associated with reduced risk of myopia as an adult
Cited by: 32
Author(s): Gareth Lingham, Seyhan Yazar, Robyn Lucas, Elizabeth Milne, Alex W. Hewitt, Christopher J Hammond, Stuart MacGregor, Kathryn A. Rose, Fred K. Chen, Mingguang He, Jeremy A. Guggenheim, Michael Clarke, Seang Mei Saw, Cathy Williams, Minas T. Coroneo, Leon Straker, David A. Mackey
Software Mentions: 2
Published: over 3 years ago

10.1089/rej.2018.2077

The Plasma NAD+Metabolome Is Dysregulated in “Normal” Aging
Cited by: 114
Author(s): James P. Clement, Matthew Wai Kin Wong, Anne Poljak, Perminder S. Sachdev, Nady Braidy
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.11183

DXA reference values of the humanoid sheep model in preclinical studies
Cited by: 1
Author(s): Christoph Biehl, J. Schmitt, Sabine Stoetzel, Deeksha Malhan, Fathi Hassan, Gero Knapp, Christian Heiß, Thaqif El Khassawna
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0233213

Urinary metabolites associate with the rate of kidney function decline in patients with autosomal dominant polycystic kidney disease
Cited by: 13
Author(s): Shosha E.I. Dekker, Aswin Verhoeven, Darius Soonawala, Dorien J.M. Peters, Johan W. de Fijter, Oleg A. Mayboroda
Software Mentions: 2
Published: over 4 years ago

10.1002/ctm2.430

Identification of potential vaccine targets for COVID‐19 by combining single‐cell and bulk TCR sequencing
Cited by: 10
Author(s): Ping-ping Wang, Zhaochun Xu, Wenyang Zhou, Xiyun Jin, Chang Xu, Meng Luo, Kexin Ma, Huimin Cao, Yan Huang, Xiaoyu Lin, Fenglan Pang, Yiqun Li, Qinghua Jiang
Software Mentions: 2
Published: over 3 years ago

10.1186/s13071-019-3744-9

Potential impact of climate change on the geographical distribution of two wild vectors of Chagas disease in Chile: Mepraia spinolai and Mepraia gajardoi
Cited by: 26
Author(s): Rubén Garrido, Antonella Bacigalupo, Francisco T. Peña-Gómez, Ramiro O. Bustamante, Pedro E. Cattan, David Eladio Gorla, Carezza Botto‐Mahan
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0143282

Ecological Niche Modelling Predicts Southward Expansion of Lutzomyia (Nyssomyia) flaviscutellata (Diptera: Psychodidae: Phlebotominae), Vector of Leishmania (Leishmania) amazonensis in South America, under Climate Change
Cited by: 74
Author(s): Bruno Moreira de Carvalho, Elizabeth Ferreira Rangel, P. D. Ready, Mariana M. Vale
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12957-021-02168-8

Immune infiltrating cells in cholangiocarcinoma may become clinical diagnostic markers: based on bioinformatics analysis
Cited by: 5
Author(s): Yong‐Wei Zhang, Sihan Chen, Jun Li, Wei Dai, Yeben Qian
Software Mentions: 2
Published: over 3 years ago

10.3390/v13040674

Transcriptional Landscape of Vero E6 Cells during Early Swine Acute Diarrhea Syndrome Coronavirus Infection
Cited by: 6
Author(s): Sha Zeng, Ouyang Peng, Ruipu Sun, Qiuping Xu, Fangyu Hu, Yan Zhao, Chunyi Xue, Yongchang Cao, Hao Zhang
Software Mentions: 2
Published: over 3 years ago

10.1186/s12284-019-0281-2

Exploring the genetic diversity within traditional Philippine pigmented Rice
Cited by: 12
Author(s): Edwige Gaby Nkouaya Mbanjo, Huw Jones, Xavier Greg Caguiat, S. Carandang, John Carlos I. Ignacio, Marilyn C. Ferrer, Lesley A. Boyd, Tobias Kretzschmar
Software Mentions: 2
Published: over 5 years ago

10.3390/ani9070443

Early Feeding Regime of Waste Milk, Milk, and Milk Replacer for Calves Has Different Effects on Rumen Fermentation and the Bacterial Community
Cited by: 17
Author(s): Rong Zhang, Weibing Zhang, Yanliang Bi, Yan Tu, Yves Beckers, Han-chang Du, Qiyu Diao
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0243047

Global risk of invasion by Bactrocera zonata: Implications on horticultural crop production under changing climatic conditions
Cited by: 22
Author(s): Kumbirai M. Zingore, G. Sithole, Elfatih M. Abdel‐Rahman, Samira A. Mohamed, Sunday Ekesi, Chrysantus M. Tanga, Mohammed E. E. Mahmoud
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12284-019-0362-2

Genome-Wide Association Analysis Dissects the Genetic Basis of the Grain Carbon and Nitrogen Contents in Milled Rice
Cited by: 8
Author(s): Liang Tang, Fan Zhang, Anjin Liu, Jian Sun, Mei Song, Xin Wang, Zhongyuan Liu, Wanying Liu, Qing Lu, Shuangjie Chen
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41437-021-00416-x

The recombination landscape and multiple QTL mapping in a Solanum tuberosum cv. ‘Atlantic’-derived F1 population
Cited by: 7
Author(s): Guilherme da Silva Pereira, Marcelo Mollinari, Mitchell J. Schumann, M. E. Clough, Zhao‐Bang Zeng, G. Craig Yencho
Software Mentions: 2
Published: over 3 years ago

10.1186/s12284-020-00387-3

Production Assessment and Genome Comparison Revealed High Yield Potential and Novel Specific Alleles Associated with Fertility and Yield in Neo-Tetraploid Rice
Cited by: 15
Author(s): Hang Yu, Muhammad Qasim Shahid, Qihang Li, Yudi Li, Cong Liu, Zengjun Lu, Jinwen Wu, Zemin Zhang, Xiangdong Liu
Software Mentions: 2
Published: over 4 years ago

10.1186/s12284-020-00406-3

Genome-Wide Association Study for Yield and Yield Related Traits under Reproductive Stage Drought in a Diverse indica-aus Rice Panel
Cited by: 23
Author(s): Aditi Bhandari, Nitika Sandhu, Jérôme Bartholomé, Tuong-Vi Cao-Hamadoun, Nourollah Ahmadi, Nilima Kumari, Arvind Kumar
Software Mentions: 2
Published: over 4 years ago

10.1002/mgg3.1659

Stepwise shortening of agalsidase beta infusion duration in Fabry disease: Clinical experience with infusion rate escalation protocol
Cited by: 2
Author(s): Eleonora Riccio, Mario Zanfardino, Monica Franzese, Ivana Capuano, Pasquale Buonanno, Lucia Ferreri, Maria Amicone, Antonio Pisani
Software Mentions: 2
Published: over 3 years ago

10.3390/molecules25112582

Beer Phenolic Composition of Simple Phenols, Prenylated Flavonoids and Alkylresorcinols
Cited by: 31
Author(s): Anna Boronat, Natalia Soldevila‐Domenech, José Rodríguez-Morató, Miriam Martı́nez-Huélamo, Rosa María Lamuela‐Raventós, Rafael de la Torre
Software Mentions: 2
Published: over 4 years ago

10.1002/cre2.139

Microbial and inflammatory‐based salivary biomarkers of head and neck squamous cell carcinoma
Cited by: 37
Author(s): Anna Vesty, Kim Gear, Kristi Biswas, Fiona J. Radcliff, Michael W. Taylor, Richard Douglas
Software Mentions: 2
Published: almost 6 years ago

10.3390/ijms22126424

(S)-Reutericyclin: Susceptibility Testing and In Vivo Effect on Murine Fecal Microbiome and Volatile Organic Compounds
Cited by: 2
Author(s): Bernhard Kienesberger, Beate Obermüller, Georg Singer, Barbara Mittl, Reingard Grabherr, Sigrid Mayrhofer, Stefan Heinl, Vanessa Stadlbauer, Angela Horvath, Wolfram Miekisch, Patricia Fuchs, Ingeborg Klymiuk, Holger Till, Christoph Castellani
Software Mentions: 2
Published: over 3 years ago

10.1038/s41597-019-0198-z

ColPortal, an integrative multiomic platform for analysing epigenetic interactions in colorectal cancer
Cited by: 7
Author(s): Ángel Esteban-Gil, Fernando Pérez-Sánz, José García‐Solano, Begoña Alburquerque-González, María Antonia Parreño-González, Jesualdo Tomás Fernández-Breis, Edith Rodríguez-Braun, Paola Pimentel, Anne Tuomisto, Markus J. Mäkinen, Ondřej Slabý, Pablo Conesa‐Zamora
Software Mentions: 2
Published: about 5 years ago

10.3390/molecules26175425

HS–SPME–GC–MS and Electronic Nose Reveal Differences in the Volatile Profiles of Hedychium Flowers
Cited by: 15
Author(s): Yiwei Zhou, Farhat Abbas, Zhidong Wang, Yunyi Yu, Yuechong Yue, Xinyue Li, Rangcai Yu, Yanting Fan
Software Mentions: 2
Published: about 3 years ago

10.3390/microorganisms8020231

Synchrony Degree of Dietary Energy and Nitrogen Release Influences Microbial Community, Fermentation, and Protein Synthesis in a Rumen Simulation System
Cited by: 21
Author(s): Jun Zhang, Nan Zheng, Weijun Shen, Shengguo Zhao, Jiaqi Wang
Software Mentions: 2
Published: almost 5 years ago

10.1038/srep18571

From an imbalance to a new imbalance: Italian-style gluten-free diet alters the salivary microbiota and metabolome of African celiac children
Cited by: 31
Author(s): Danilo Ercolini, Ruggiero Francavilla, Lucia Vannini, Teresa Capriati, Raffaella Di Cagno, Giuseppe Iacono, Maria De Angelis, Marco Gobbetti
Software Mentions: 2
Published: almost 9 years ago

10.1038/srep22152

Sesquiterpene emissions from Alternaria alternata and Fusarium oxysporum: Effects of age, nutrient availability and co-cultivation
Cited by: 44
Author(s): Fabian Weikl, Andrea Ghirardo, Jörg‐Peter Schnitzler, Karin Pritsch
Software Mentions: 2
Published: over 8 years ago

10.1186/s13148-020-00977-4

Whole blood DNA methylation aging markers predict colorectal cancer survival: a prospective cohort study
Cited by: 10
Author(s): Xīn Gào, Yan Zhang, Daniel Boakye, Xiangwei Li, Jenny Chang‐Claude, Michael Hoffmeister, Hermann Brenner
Software Mentions: 2
Published: almost 4 years ago

10.1038/srep25963

Control factors and scale analysis of annual river water, sediments and carbon transport in China
Cited by: 19
Author(s): Chunlin Song, Genxu Wang, Xiangyang Sun, Ruiying Chang, Tianqiao Mao
Software Mentions: 2
Published: over 8 years ago

10.3390/foods10081791

Characterization and Classification of Cocoa Bean Shells from Different Regions of Venezuela Using HPLC-PDA-MS/MS and Spectrophotometric Techniques Coupled to Chemometric Analysis
Cited by: 7
Author(s): Letricia Barbosa-Pereira, Simona Belviso, Ilario Ferrocino, Olga Rojo-Poveda, Giuseppe Zeppa
Software Mentions: 2
Published: over 3 years ago

10.3390/microorganisms7090352

The Architecture of Monospecific Microalgae Biofilms
Cited by: 23
Author(s): Andrea Fanesi, Armelle Paule, Olivier Bernard, Romain Briandet, Filipa Lopes
Software Mentions: 2
Published: about 5 years ago

10.3389/fpls.2018.00081

Genome-Wide Association Analyses Identify QTL Hotspots for Yield and Component Traits in Durum Wheat Grown under Yield Potential, Drought, and Heat Stress Environments
Cited by: 146
Author(s): Sivakumar Sukumaran, M.P. Reynolds, Carolina Sansaloni
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12863-019-0716-1

Tissue expression profiles unveil the gene interaction of hepatopancreas, eyestalk, and ovary in the precocious female Chinese mitten crab, Eriocheir sinensis
Cited by: 10
Author(s): Xiaowen Chen, Jun Wang, Xin Hou, Wucheng Yue, Shu Huang, Chenghui Wang
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13395-019-0209-y

Immunohistochemical phenotyping of T cells, granulocytes, and phagocytes in the muscle of cancer patients: association with radiologically defined muscle mass and gene expression
Cited by: 14
Author(s): Ana Anoveros‐Barrera, Amritpal S. Bhullar, Cynthia Stretch, Abha R. Dunichand‐Hoedl, Karen J. B. Martins, Aja M. Rieger, David L. Bigam, Todd McMullen, Oliver F. Bathe, Charles T. Putman, Catherine J. Field, Vickie E. Baracos, Vera C. Mazurak
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0235068

Keeping the power on to home medical devices
Cited by: 5
Author(s): Richard Bean, Stephen Snow, Mashhuda Glencross, Stephen Viller, Neil Horrocks
Software Mentions: 2
Published: over 4 years ago

10.1038/srep43150

Response of rhizosphere soil microbial to Deyeuxia angustifolia encroaching in two different vegetation communities in alpine tundra
Cited by: 14
Author(s): Li Lin, Xing Ming, Jingling Lv, Xiaolong Wang, Xia Chen
Software Mentions: 2
Published: over 7 years ago

10.1007/s00122-018-3071-0

Biochemical and genetic analyses of N metabolism in maize testcross seedlings: 2. Roots
Cited by: 14
Author(s): Ignacio Trucillo Silva, Hari Kishan R. Abbaraju, Lynne Fallis, Hongjun Liu, Michael Lee, Kanwarpal S. Dhugga
Software Mentions: 2
Published: over 6 years ago

10.1007/s00122-021-03786-2

Projecting results of zoned multi-environment trials to new locations using environmental covariates with random coefficient models: accuracy and precision
Cited by: 13
Author(s): Harimurti Buntaran, Johannes Forkman, Hans‐Peter Piepho
Software Mentions: 2
Published: over 3 years ago

10.1186/s40168-020-00816-x

Gut microbiota from persons with attention-deficit/hyperactivity disorder affects the brain in mice
Cited by: 78
Author(s): Anouk C. Tengeler, Sarita Dam, Maximilian Wiesmann, Jilly Naaijen, Miranda Van Bodegom, Clara Belzer, Pieter J. Dederen, Viviènne Verweij, Barbara Franke, Tamás Kozicz, Alejandro Arias Vásquez, Amanda J. Kiliaan
Software Mentions: 2
Published: over 4 years ago

10.3390/genes10100746

Increased Expression of Lipid Metabolism Genes in Early Stages of Wooden Breast Links Myopathy of Broilers to Metabolic Syndrome in Humans
Cited by: 32
Author(s): Juniper A. Lake, Michael B. Papah, Behnam Abasht
Software Mentions: 2
Published: about 5 years ago

10.1101/2020.12.28.424565

SARS-CoV-2 disease severity and transmission efficiency is increased for airborne but not fomite exposure in Syrian hamsters
Cited by: 13
Author(s): Julia R Port, Claude Kwe Yinda, Irene Offei Owusu, Myndi G. Holbrook, Robert J. Fischer, Trenton Bushmaker, Victoria A. Avanzato, Jonathan Schulz, Neeltje van Doremalen, Chad S. Clancy, Vincent J. Munster
Software Mentions: 2
Published: almost 4 years ago

10.1101/2020.08.11.246314

K18-hACE2 mice develop respiratory disease resembling severe COVID-19
Cited by: 21
Author(s): Claude Kwe Yinda, Julia R Port, Trenton Bushmaker, Irene Offei Owusu, Victoria A. Avanzato, Robert J. Fischer, Jonathan Schulz, Myndi G. Holbrook, Madison J. Hebner, Rebecca Rosenke, Tina Thomas, Andrea Marzi, Sonja M. Best, Emmie de Wit, Carl Shaia, Neeltje van Doremalen, Vincent J. Munster
Software Mentions: 2
Published: over 4 years ago

10.3389/fcimb.2021.727665

RNA-Seq Analysis of the Effect of Zinc Deficiency on Microsporum canis, ZafA Gene Is Important for Growth and Pathogenicity
Cited by: 2
Author(s): Pengxiu Dai, Yangou Lv, Xiaohua Gong, Jianye Han, Peng Gao, Hao-jie Xu, Yihua Zhang, Xinke Zhang
Software Mentions: 2
Published: about 3 years ago

10.1128/mBio.01516-16

Tuberculosis Susceptibility and Vaccine Protection Are Independently Controlled by Host Genotype
Cited by: 99
Author(s): Clare M. Smith, Megan K. Proulx, Andrew J. Olive, Dominick J. Laddy, Bibhuti B. Mishra, Caitlin E. Moss, Nuria Martinez Gutierrez, Michelle M. Bellerose, Palmira Barreira-Silva, Jia Yao Phuah, Richard E. Baker, Samuel M. Behar, Hardy Kornfeld, Thomas G. Evans, Gillian Beamer, Christopher M. Sassetti
Software Mentions: 2
Published: about 8 years ago

10.1155/2020/7643528

Effect of Massa Medicata Fermentata on the Gut Microbiota of Dyspepsia Mice Based on 16S rRNA Technique
Cited by: 2
Author(s): Xiaorui Zhang, Hongling Zhang, Qinwan Huang, Jilin Sun, Renchuan Yao, Jin Wang
Software Mentions: 2
Published: about 4 years ago

10.3390/nu12113414

Relationship between Dispositional Mindfulness, Psychological Health, and Diet Quality among Healthy Midlife Adults
Cited by: 4
Author(s): Shannon D. Donofry, Kirk I. Erickson, Michele D. Levine, Peter J. Gianaros, Matthew F. Muldoon, Stephen B. Manuck
Software Mentions: 2
Published: about 4 years ago

10.12688/f1000research.28510.2

Pan-cancer chromatin analysis of the human vtRNA genes uncovers their association with cancer biology
Cited by: 4
Author(s): Rafael Sebastián Fort, Marı́a Ana Duhagon
Software Mentions: 2
Published: over 3 years ago

10.1007/s00394-020-02190-8

Diet change affects intestinal microbiota restoration and improves vertical sleeve gastrectomy outcome in diet-induced obese rats
Cited by: 6
Author(s): Joana Rossell, Björn Brindefalk, Juan Antonio Baena‐Fustegueras, Júlia Peinado-Onsurbe, Klas I. Udekwu
Software Mentions: 2
Published: almost 5 years ago

10.3389/fvets.2021.648698

Glycyrrhizin Attenuates Salmonella Typhimurium-Induced Tissue Injury, Inflammatory Response, and Intestinal Dysbiosis in C57BL/6 Mice
Cited by: 6
Author(s): Baikui Wang, Xiaolin Ye, Yuguang Zhou, Pengwei Zhao, Yulong Mao
Software Mentions: 2
Published: over 3 years ago

10.1128/mBio.00560-21

VIP-SPOT: an Innovative Assay To Quantify the Productive HIV-1 Reservoir in the Monitoring of Cure Strategies
Cited by: 7
Author(s): María C. Puertas, Ángel Bayón-Gil, Maria C. Garcia-Guerrero, María Salgado, Víctor Urrea, Sara Morón-López, Ruth Peña, Esther Jiménez-Moyano, Bonaventura Clotet, Julia G. Prado, Javier Martínez-Picado
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-018-22142-x

Improved isolation strategies to increase the yield and purity of human urinary exosomes for biomarker discovery
Cited by: 133
Author(s): Ali Hashemi Gheinani, Mike Vögeli, Ulrich Baumgartner, Erik Vassella, Annette Draeger, Fiona C. Burkhard, Katia Monastyrskaya
Software Mentions: 2
Published: over 6 years ago

10.1186/s12863-020-0808-y

Trait-based mapping to identify the genetic factors underlying anaerobic germination of rice: Phenotyping, GXE, and QTL mapping
Cited by: 12
Author(s): S. Ghosal, Fergie Ann Quilloy, Carlos Casal, Endang M. Septiningsih, Merlyn S. Mendioro, Shalabh Dixit
Software Mentions: 2
Published: almost 5 years ago

10.1097/MD.0000000000025553

Identification and analysis of key genes associated with acute myocardial infarction by integrated bioinformatics methods
Cited by: 15
Author(s): Siyu Guo, Jiarui Wu, Wei Zhou, Xinkui Liu, Yingying Liu, Jingyuan Zhang, Shanshan Jia, Jialin Li, Haojia Wang
Software Mentions: 2
Published: over 3 years ago

10.1186/s13223-021-00569-8

Pre-existing asthma as a comorbidity does not modify cytokine responses and severity of COVID-19
Cited by: 2
Author(s): Jian Luo, Yi‐Ling Chen, Wentao Chen, David A. Duncan, Alexander J. Mentzer, Julian C. Knight, Graham S. Ogg, Paul Klenerman, Ian Pavord, Luzheng Xue
Software Mentions: 2
Published: over 3 years ago

10.3390/cells9112441

Changes in Striatal Medium Spiny Neuron Morphology Resulting from Dopamine Depletion Are Reversible
Cited by: 10
Author(s): Victoria Sofie Witzig, Daniel Komnig, Björn H. Falkenburger
Software Mentions: 2
Published: about 4 years ago

10.3390/md18050262

The Effects of the Marine-Derived Polysaccharides Laminarin and Chitosan on Aspects of Colonic Health in Pigs Challenged with Dextran Sodium Sulphate
Cited by: 14
Author(s): Ruth Rattigan, John V. O’Doherty, Stafford Vigors, M. F. Ryan, Rocco S. Sebastiano, John J. Callanan, Kevin Thornton, Gaurav Rajauria, Lekha Menon Margassery, Alan D. W. Dobson, Niall O’Leary, T. Sweeney
Software Mentions: 2
Published: over 4 years ago

10.1128/mSystems.00032-17

Systematic Discovery of Archaeal Transcription Factor Functions in Regulatory Networks through Quantitative Phenotyping Analysis
Cited by: 24
Author(s): Cynthia L. Darnell, Peter D. Tonner, Jordan G. Gulli, Scott C. Schmidler, Amy K. Schmid
Software Mentions: 2
Published: about 7 years ago

10.1128/mSystems.00098-18

Comprehensive Virulence Gene Profiling of Bovine Non- aureus Staphylococci Based on Whole-Genome Sequencing Data
Cited by: 25
Author(s): Sohail Naushad, Syed Ali Raza Naqvi, Diego Nobrega, Christopher D. Luby, John P. Kastelic, Herman W. Barkema, Jeroen De Buck
Software Mentions: 2
Published: over 5 years ago

10.1007/s00421-021-04635-2

Sprint interval training (SIT) reduces serum epidermal growth factor (EGF), but not other inflammatory cytokines in trained older men
Cited by: 11
Author(s): Zerbu Yasar, Bradley T. Elliott, Yvoni Kyriakidou, Chiazor T Nwokoma, Ruth D Postlethwaite, Christopher Gaffney, Susan Dewhurst, Lawrence D. Hayes
Software Mentions: 2
Published: over 3 years ago

10.3390/md19040204

Seasonal Variation of the Proximate Composition, Mineral Content, Fatty Acid Profiles and Other Phytochemical Constituents of Selected Brown Macroalgae
Cited by: 26
Author(s): Marco García‐Vaquero, Gaurav Rajauria, Marta Miranda, T. Sweeney, Marta López‐Alonso, John V. O’Doherty
Software Mentions: 2
Published: over 3 years ago

10.3390/md19060309

Evaluation of Ultrasound, Microwave, Ultrasound–Microwave, Hydrothermal and High Pressure Assisted Extraction Technologies for the Recovery of Phytochemicals and Antioxidants from Brown Macroalgae
Cited by: 20
Author(s): Marco García‐Vaquero, Rajeev Ravindran, Órla Walsh, John V. O’Doherty, Amit K. Jaiswal, Brijesh K. Tiwari, Gaurav Rajauria
Software Mentions: 2
Published: over 3 years ago

10.18632/aging.203457

N6-methyladenosine (m6A) modification and its clinical relevance in cognitive dysfunctions
Cited by: 15
Author(s): Bingying Du, Yanbo Zhang, Meng Liang, Zengkan Du, Haibo Li, Cong Fan, Hailing Zhang, Yan Jiang, Xiaoying Bi
Software Mentions: 2
Published: about 3 years ago

10.3390/life11070663

Mitochondrial Genomic Landscape: A Portrait of the Mitochondrial Genome 40 Years after the First Complete Sequence
Cited by: 15
Author(s): Alessandro Formaggioni, Andrea Luchetti, Federico Plazzi
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0188798

Distinctness of Brazilian common bean cultivars with carioca and black grain by means of morphoagronomic and molecular descriptors
Cited by: 16
Author(s): Jéssica Delfini, Vânia Moda-Cirino, Claudete de Fátima Ruas, José dos Santos Neto, Paulo Maurício Ruas, Juliana Sawada Buratto, Eduardo Augusto Ruas, Leandro Simões Azeredo Gonçalves
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12935-021-02163-9

Effects of RNA methylation N6-methyladenosine regulators on malignant progression and prognosis of melanoma
Cited by: 15
Author(s): Jinfang Liu, Zijian Zhou, Ling Ma, Chujun Li, Yongcheng Lin, Ting Yu, Ji‐Fu Wei, Lingjun Zhu, Gang Yao
Software Mentions: 2
Published: about 3 years ago

10.1038/s41396-020-00759-z

Achieving similar root microbiota composition in neighbouring plants through airborne signalling
Cited by: 76
Author(s): Hyun Gi Kong, Geun Cheol Song, Hee‐Jung Sim, Choong‐Min Ryu
Software Mentions: 2
Published: about 4 years ago

10.3389/fpsyg.2021.638641

Focus on the Beauty of Body: The Mediation Role of Body Appreciation Between Perfectionism and Body-Related Shame and Body-Related Guilt
Cited by: 2
Author(s): Liang Zhang, Shen Lingting, Ying Cai, Xiaoyan Liu, Zhang Yan, Ronghua Ying, Dingren Bi, Yanqiang Tao
Software Mentions: 2
Published: over 3 years ago

10.1038/s41419-021-03816-3

Proteomics of extracellular vesicles in plasma reveals the characteristics and residual traces of COVID-19 patients without underlying diseases after 3 months of recovery
Cited by: 20
Author(s): Kaimin Mao, Qi Tan, Yanling Ma, Sufei Wang, Hua Zhong, Yuhan Liao, Qi Huang, Wenjing Xiao, Hui Xia, Xingyi Tan, Ping Luo, Jing Xu, Danling Long, Yang Jin
Software Mentions: 2
Published: over 3 years ago

10.3390/cancers12051247

Harnessing Gene Expression Profiles for the Identification of Ex Vivo Drug Response Genes in Pediatric Acute Myeloid Leukemia
Cited by: 8
Author(s): David G. J. Cucchi, Costa Bachas, Marry M. van den Heuvel‐Eibrink, Susan T.C.J.M. Arentsen-Peters, Zinia J. Kwidama, Gerrit Jan Schuurhuis, Yehuda G. Assaraf, Valérie de Haas, Gertjan J. L. Kaspers, Jacqueline Cloos
Software Mentions: 2
Published: over 4 years ago

10.1186/s13068-019-1422-y

Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
Cited by: 9
Author(s): Tiziano Benocci, María Victoria Aguilar Pontes, Roland S. Kun, Ronnie J.M. Lubbers, Kathleen Lail, Mei Wang, Anna Lipzen, Vivian Ng, Igor V. Grigoriev, Bernhard Schink, Paul Daly, Ronald P. de Vries
Software Mentions: 2
Published: over 5 years ago

10.18632/aging.102650

Dysregulation of antimicrobial peptide expression distinguishes Alzheimer’s disease from normal aging
Cited by: 12
Author(s): Min Wang, I-Feng Peng, Simin Li, Xianda Hu
Software Mentions: 2
Published: almost 5 years ago

10.7189/jogh.09.020412

A cross-sectional survey of practices and knowledge among antibiotic retailers in Nairobi, Kenya
Cited by: 28
Author(s): Dishon Muloi, Eric M. Fèvre, Judy Bettridge, Robert Rono, Daniel Ong'are, James M. Hassell, M. Karani, Patrick Muinde, Bram A. D. van Bunnik, Alice Street, Margo Chase-Topping, Amy B. Pedersen, Melissa J. Ward, Mark Woolhouse
Software Mentions: 2
Published: about 5 years ago

10.3390/cancers13184660

Whole Blood Transcriptome Profiling Identifies DNA Replication and Cell Cycle Regulation as Early Marker of Response to Anti-PD-1 in Patients with Urothelial Cancer
Cited by: 1
Author(s): Sandra van Wilpe, Victoria Wosika, Laura Ciarloni, Sahar Hosseinian Ehrensberger, Rachel Jeitziner, Paolo Angelino, Tjitske Duiveman-de Boer, Rutger H.T. Koornstra, I. Jolanda M. de Vries, Winald R. Gerritsen, Jack A. Schalken, Niven Mehra
Software Mentions: 2
Published: about 3 years ago

10.1002/ece3.5644

Patterns of livestock depredation and cost‐effectiveness of fortified livestock enclosures in northern Tanzania
Cited by: 42
Author(s): Bernard M. Kissui, Christian Kiffner, Hannes König, Robert A. Montgomery
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-33813-0

Increased transferrin saturation is associated with subgingival microbiota dysbiosis and severe periodontitis in genetic haemochromatosis
Cited by: 17
Author(s): Émile Boyer, Sandrine Le Gall‐David, Bénédicte Martin, Shao Bing Fong, Olivier Loréal, Yves Deugnier, Martine Bonnaure‐Mallet, Vincent Meuric
Software Mentions: 2
Published: about 6 years ago

10.1042/BSR20201084

Integrative genomics analysis identifies five promising genes implicated in insomnia risk based on multiple omics datasets
Cited by: 7
Author(s): Haozhen Sun, Jianhua Zhang, Yunlong Ma, Jingjing Liu
Software Mentions: 2
Published: about 4 years ago

10.3390/ijns5020018

Newborn Screening for Selected Disorders in Nepal: A Pilot Study
Cited by: 5
Author(s): Arti Pandey, Suchita Joshi, Rateena Rajbhandari, Prerana Kansakar, Sadichhya Dhakal, Ralph Fingerhut
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0114480

Cytokine Network in Adults with Falciparum Malaria and HIV-1: Increased IL-8 and IP-10 Levels Are Associated with Disease Severity
Cited by: 25
Author(s): Åse Berg, Sam Patel, Miguel Gonca, Catarina David, Kari Otterdal, Thor Ueland, Ingvild Dalen, Jan Terje Kvaløy, Tom Eirik Mollnes, Pål Aukrust, Nina Langeland
Software Mentions: 2
Published: almost 10 years ago

10.1042/BSR20193101

Comparative analysis of inflammatory signature profiles in eosinophilic and noneosinophilic chronic rhinosinusitis with nasal polyposis
Cited by: 21
Author(s): Yao Yao, Chunguang Yang, Xing Yi, Shaobing Xie, Hong Sun
Software Mentions: 2
Published: almost 5 years ago

10.1186/s13059-017-1171-9

Single-cell transcriptome conservation in cryopreserved cells and tissues
Cited by: 131
Author(s): Amy Guillaumet-Adkins, Gustavo Rodríguez-Esteban, Elisabetta Mereu, María Méndez-Lago, Diego Adhemar Jaitin, Alberto Villanueva, August Vidal, Alex Martinez-Martí, Enriqueta Felip, Ana Vivancos, Hadas Keren‐Shaul, Simon Heath, Marta Gut, Ido Amit, Ivo Gut, Holger Heyn
Software Mentions: 2
Published: over 7 years ago

Projects: cran: corrplot

Papers Mentioning corrplot 1,077