Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: babel

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/babel

Ribosome Profiling Data Analysis
5 versions
Latest release: over 8 years ago
278 downloads last month

Papers Mentioning babel 13

Molecular docking and machine learning analysis of Abemaciclib in colon cancer
Cited by: 14
Author(s): José Liñares-Blanco, Cristian R. Munteanu, Alejandro Pazos, Carlos Fernández-Lozano
Software Mentions: 5
Published: over 4 years ago

10.7554/eLife.53127

Translational control of one-carbon metabolism underpins ribosomal protein phenotypes in cell division and longevity
Cited by: 23
Author(s): Nairita Maitra, Chi He, Heidi M. Blank, Mitsuhiro Tsuchiya, Birgit Schilling, Matt Kaeberlein, Rodolfo Aramayo, Brian K. Kennedy, Michael Polymenis
Software Mentions: 4
Published: over 4 years ago

10.7717/peerj.8864

DeepBindPoc: a deep learning method to rank ligand binding pockets using molecular vector representation
Cited by: 9
Author(s): Haiping Zhang, Konda Mani Saravanan, Jinzhi Lin, Linbu Liao, Jiawei Ng, Jiaxiu Zhou, Yanjie Wei
Software Mentions: 3
Published: over 4 years ago

10.1186/1471-2164-15-S9-S2

TINAGL1 and B3GALNT1 are potential therapy target genes to suppress metastasis in non-small cell lung cancer
Cited by: 60
Author(s): Hideaki Umeyama, Mitsuo Iwadate, Y-h. Taguchi
Software Mentions: 3
Published: almost 10 years ago

10.1093/bioinformatics/btw167

pileup.js: a JavaScript library for interactive and in-browser visualization of genomic data
Cited by: 21
Author(s): Dan Vanderkam, Bülent Arman Aksoy, Isaac Hodes, Jaclyn Perrone, Jeff Hammerbacher
Software Mentions: 3
Published: over 8 years ago

10.1002/2211-5463.12875

Potential anti‐SARS‐CoV‐2 drug candidates identified through virtual screening of the ChEMBL database for compounds that target the main coronavirus protease
Cited by: 46
Author(s): Motonori Tsuji
Software Mentions: 3
Published: over 4 years ago

10.1186/s13321-018-0279-6

Using SMILES strings for the description of chemical connectivity in the Crystallography Open Database
Cited by: 112
Author(s): Miguel Quirós, S. Gražulis, Saulė Girdzijauskaitė, Andrius Merkys, Antanas Vaitkus
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.ppat.1006411

A conformational switch high-throughput screening assay and allosteric inhibition of the flavivirus NS2B-NS3 protease
Cited by: 110
Author(s): Michael Brecher, Li Zhong, Binbin Liu, Jing Zhang, Cheri A. Koetzner, Adham M. Alifarag, Susan Jones, Qishan Lin, Laura D. Kramer, Hongmin Li
Software Mentions: 2
Published: over 7 years ago

10.3390/plants8090343

Genome-Wide Analysis and Expression Profiling of Rice Hybrid Proline-Rich Proteins in Response to Biotic and Abiotic Stresses, and Hormone Treatment
Cited by: 11
Author(s): Ritu Kapoor, Gulshan Kumar, Preeti Arya, Rajdeep Jaswal, Priyanka Jain, Kashmir Singh, Tilak Raj Sharma
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0070661

Fast Docking on Graphics Processing Units via Ray-Casting
Cited by: 8
Author(s): Karen R. Khar, Lukasz Goldschmidt, John Karanicolas
Software Mentions: 1
Published: over 11 years ago

10.1186/s13321-016-0131-9

Geomfinder: a multi-feature identifier of similar three-dimensional protein patterns: a ligand-independent approach
Cited by: 3
Author(s): Gabriel Núñez‐Vivanco, Alejandro Valdés-Jiménez, Felipe Besoaín, Miguel Reyes‐Parada
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0130062

Novel Broad Spectrum Inhibitors Targeting the Flavivirus Methyltransferase
Cited by: 55
Author(s): Michael Brecher, Hui Chen, Binbin Liu, Nilesh K. Banavali, Susan Jones, Jing Zhang, Li Zhong, Laura D. Kramer, Hongmin Li
Software Mentions: 1
Published: over 9 years ago

10.3390/molecules22020220

Trypanocidal Activity of Quinoxaline 1,4 Di-N-oxide Derivatives as Trypanothione Reductase Inhibitors
Cited by: 25
Author(s): Karla Fabiola Chacón-Vargas, Benjamín Nogueda‐Torres, Luvia Enid Sánchez-Torres, Erick Suárez-Contreras, Juan Carlos Villalobos-Rocha, Yuridia Torres-Martínez, Edgar E. Lara-Ramírez, Giulia Fiorani, R. Luise Krauth‐Siegel, María Laura Bolognesi, Antonio Monge, Gildardo Rivera
Software Mentions: 1
Published: almost 8 years ago