Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: adegenet

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/adegenet

Exploratory Analysis of Genetic and Genomic Data
43 versions
Latest release: almost 2 years ago
26 dependent packages
7,146 downloads last month

Papers Mentioning adegenet 767

10.1111/eva.12971
Multiple invasions of a generalist herbivore—Secondary contact between two divergent lineages of <i>Nezara viridula</i> Linnaeus in Australia
Cited by: 5
Author(s): Dean R. Brookes, James Hereward, Lewis Wilson, Gimme H. Walter
Software Mentions: 2
Published: over 4 years ago
10.1111/eva.12892
Genome‐wide SNPs resolve spatiotemporal patterns of connectivity within striped marlin (<i>Kajikia audax</i>), a broadly distributed and highly migratory pelagic species
Cited by: 19
Author(s): Nadya R Mamoozadeh, John E. Graves, Jan R. McDowell
Software Mentions: 2
Published: almost 5 years ago
10.1111/eva.12368
Adaptation of a plant pathogen to partial host resistance: selection for greater aggressiveness in grapevine downy mildew
Cited by: 81
Author(s): Chloé Delmas, Frédéric Fabre, Jérôme Jolivet, Isabelle D. Mazet, Sylvie Richart-Cervera, Laurent Delière, François Delmotte
Software Mentions: 2
Published: over 8 years ago
10.1111/evo.12678
Speciation by genome duplication: Repeated origins and genomic composition of the recently formed allopolyploid species<i>Mimulus peregrinus</i>
Cited by: 62
Author(s): Mario Vallejo‐Marín, Richard J. A. Buggs, Arielle M. Cooley, Joshua R. Puzey
Software Mentions: 2
Published: over 9 years ago
10.3389/fgene.2020.00316
Combining QTL Analysis and Genomic Predictions for Four Durum Wheat Populations Under Drought Conditions
Cited by: 21
Author(s): Meryem Zaïm, Hafssa Kabbaj, Zakaria Kehel, Gregor Gorjanc, Abdelkarim Filali‐Maltouf, Bouchra Belkadi, M. M. Nachit, Filippo M. Bassi
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2020.00504
Development of a Large Gene-Associated SSR Marker Set and in-Depth Genetic Characterization in Scarlet Sage
Cited by: 3
Author(s): Si-Qian Jiao, Aixiang Dong, Tian-Le Shi, Hui Liu, Ilga Porth, Haibo Xin, Jian‐Feng Mao
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2019.00719
Extensive Cryptic Diversity Within the Physalaemus cuvieri–Physalaemus ephippifer Species Complex (Amphibia, Anura) Revealed by Cytogenetic, Mitochondrial, and Genomic Markers
Cited by: 7
Author(s): Juliana Damieli Nascimento, Jucivaldo Dias Lima, Pablo Suárez, Diego Baldo, Gilda Vasconcellos de Andrade, Todd W. Pierson, Benjamin M. Fitzpatrick, Célio F. B. Haddad, Shirlei Maria Recco‐Pimentel, Luciana Bolsoni Lourenço
Software Mentions: 2
Published: over 5 years ago
10.3389/fgene.2020.00410
Genetic Diversity and Conservation Status of Helianthus verticillatus, an Endangered Sunflower of the Southern United States
Cited by: 7
Author(s): T. P. Edwards, Robert N. Trigiano, Bonnie H. Ownley, Alan S. Windham, Chris Wyman, Phillip A. Wadl, Denita Hadziabdic
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2020.594722
Distinguishing Between Nile Tilapia Strains Using a Low-Density Single-Nucleotide Polymorphism Panel
Cited by: 8
Author(s): Matthew Hamilton, Curtis E. Lind, B.K. Barman, Ravelina R. Velasco, Ma. Jodecel C. Danting, John A. H. Benzie
Software Mentions: 2
Published: almost 4 years ago
10.3389/fgene.2017.00045
Finding a Needle in a Haystack: Distinguishing Mexican Maize Landraces Using a Small Number of SNPs
Cited by: 11
Author(s): José Luis Caldú-Primo, Alicia Mastretta‐Yanes, Ana Wegier, Daniel Piñero
Software Mentions: 2
Published: over 7 years ago
10.3389/fmicb.2020.01280
Genetic Structure of the Norwegian Parastagonospora nodorum Population
Cited by: 9
Author(s): Min Lin, Andrea Ficke, James Cockram, Morten Lillemo
Software Mentions: 2
Published: over 4 years ago
10.3389/fpls.2016.01544
Whole Genome Sequencing Reveals Potential New Targets for Improving Nitrogen Uptake and Utilization in Sorghum bicolor
Cited by: 33
Author(s): Karen Massel, Bradley C. Campbell, Emma Mace, Shuaishuai Tai, Yongfu Tao, Belinda Worland, David R. Jordan, José Ramón Botella, Ian D. Godwin
Software Mentions: 2
Published: about 8 years ago
10.3389/fpls.2019.01466
Whole Plastome Sequencing Within Silene Section Psammophilae Reveals Mainland Hybridization and Divergence With the Balearic Island Populations
Cited by: 8
Author(s): José Carlos del Valle, Inés Casimiro-Soriguer, Ma Luisa Buide, Eduardo Narbona, Justen B. Whittall
Software Mentions: 2
Published: about 5 years ago
10.3389/fpls.2021.683422
Genome-Wide SNPs Provide Insights on the Cryptic Genetic Structure and Signatures of Climate Adaption in Amorphophallus albus Germplasms
Cited by: 1
Author(s): Yong Gao, Sheng Yin, Honglong Chu, Yanan Zhang, Haibo Wang, Huanhuan Chen, Chao Liu, Dong-Qin Dai, Lizhou Tang
Software Mentions: 2
Published: over 3 years ago
10.3389/fpls.2016.01334
Genetic Distinctiveness of Rye In situ Accessions from Portugal Unveils a New Hotspot of Unexplored Genetic Resources
Cited by: 15
Author(s): Filipa Monteiro, Patrícia Vidigal, André Barros, A. Monteiro, Hugo R. Oliveira, Wanda Viegas
Software Mentions: 2
Published: about 8 years ago
10.3389/fpls.2020.00642
Genome Wide Association Mapping of Spot Blotch Resistance at Seedling and Adult Plant Stages in Barley
Cited by: 10
Author(s): Andrea Visioni, Sajid Ur Rehman, Shyam Saran Viash, Shivendra Singh, Ram A. Vishwakarma, Sanjaya Gyawali, Ayed Al‐Abdallat, Ramesh Pal Singh Verma
Software Mentions: 2
Published: over 4 years ago
10.3389/fpls.2020.00986
Population Genetic Structure and Demographic History of Primula fasciculata in Southwest China
Cited by: 9
Author(s): Guangpeng Ren, Rubén G. Mateo, Elena Conti, Nicolas Salamin
Software Mentions: 2
Published: over 4 years ago
10.3389/fpls.2017.00818
New Genetic Insights into Pearl Millet Diversity As Revealed by Characterization of Early- and Late-Flowering Landraces from Senegal
Cited by: 18
Author(s): Oumar Diack, Ndjido Ardo Kane, Cécile Berthouly‐Salazar, Mame Codou Guèye, B Diop, Amadou Fofana, Ousmane Sy, Hamidou Tall, Leïla Zekraoui, Marie Piquet, Marie Couderc, Yves Vigouroux, Diaga Diouf, Adéline Barnaud
Software Mentions: 2
Published: over 7 years ago
10.3389/fpls.2020.00688
Genotyping-by-Sequencing Derived Single Nucleotide Polymorphisms Provide the First Well-Resolved Phylogeny for the Genus Triticum (Poaceae)
Cited by: 14
Author(s): Do Yoon Hyun, Sebastin Raveendar, Kyung Jun Lee, Gi-An Lee, Myoung-Jae Shin, Seong Hoon Kim, Jung-Ro Lee, Gyu‐Taek Cho
Software Mentions: 2
Published: over 4 years ago
10.3389/fpls.2020.561526
Parallel Alpine Differentiation in Arabidopsis arenosa
Cited by: 24
Author(s): Adam Knotek, Veronika Konečná, Guillaume Wos, Doubravka Požárová, Gabriela Šrámková, Magdalena Bohutínská, Vojtěch Zeisek, Karol Marhold, Filip Kolář
Software Mentions: 2
Published: almost 4 years ago
10.3390/genes9110535
Molecular Evidence for Two Domestication Events in the Pea Crop
Cited by: 39
Author(s): Oldřich Trněný, Jan Brus, Iveta Hradilová, Abhishek Rathore, Roma Rani Das, Pavel Kopecký, Clarice J. Coyne, Patrick A. Reeves, Christopher M. Richards, Petr Smýkal
Software Mentions: 2
Published: about 6 years ago
10.3390/genes12020258
Population Genomics of American Mink Using Whole Genome Sequencing Data
Cited by: 6
Author(s): Karim Karimi, Duy Ngoc, Mehdi Sargolzaei, Younes Miar
Software Mentions: 2
Published: almost 4 years ago
10.3390/genes12030322
Autochthonous Austrian Varieties of Prunus avium L. Represent a Regional Gene Pool, Assessed Using SSR and AFLP Markers
Cited by: 5
Author(s): Elisabeth Schüller, Felicidad Fernández Fernández, Laima Antanaviciute, Ulrike C. M. Anhalt-Brüderl, A. Spornberger, Astrid Forneck
Software Mentions: 2
Published: over 3 years ago
10.3390/genes12040546
Genetic Variability and Population Structure of Polish Konik Horse Maternal Lines Based on Microsatellite Markers
Cited by: 5
Author(s): Agnieszka Fornal, Kowalska Katarzyna, Tomasz Ząbek, Agata Piestrzyńska-Kajtoch, Adrianna D. Musiał, Katarzyna Ropka‐Molik
Software Mentions: 2
Published: over 3 years ago
10.3390/genes12050786
Population Genetics of the Invasive Red Fox, Vulpes vulpes, in South-Eastern Australia
Cited by: 0
Author(s): Kalynda M.-A. Watson, Katarina M. Mikac, Sibylle G. Schwab
Software Mentions: 2
Published: over 3 years ago
10.3390/genes12081233
Genetic Diversity and Population Structure of a Rhodes Grass (Chloris gayana) Collection
Cited by: 5
Author(s): Alemayehu Teressa Negawo, Meki S. Muktar, Yilikal Assefa, Jean Hanson, Alieu Sartie, Ermias Habte, Chris S. Jones
Software Mentions: 2
Published: over 3 years ago
10.1186/s12263-017-0573-3
Lactase persistence in Tunisia as a result of admixture with other Mediterranean populations
Cited by: 10
Author(s): Yosra Ben Halima, Rym Kéfi, Marco Sazzini, Cristina Giuliani, Sara De Fanti, Chokri Nouali, Majdi Nagara, Giacomo Mengozzi, Sahar Elouej, A. Abid, H. Jamoussi, Lotfi Chouchane, Giovanni Romeo, Sonia Abdelhak, Donata Luiselli
Software Mentions: 2
Published: about 7 years ago
10.1590/1678-4685-GMB-2016-0046
High genetic diversity among and within bitter manioc varieties cultivated in different soil types in Central Amazonia
Cited by: 6
Author(s): Alessandro Alves‐Pereira, Nivaldo Peroni, Marcelo Mattos Cavallari, Maristerra R. Lemes, Maria Imaculada Zucchi, Charles R. Clement
Software Mentions: 2
Published: over 7 years ago
10.1038/s41437-018-0144-4
Genomic comparisons reveal biogeographic and anthropogenic impacts in the koala (Phascolarctos cinereus): a dietary-specialist species distributed across heterogeneous environments
Cited by: 23
Author(s): Shannon R. Kjeldsen, Herman W. Raadsma, Kellie Leigh, Jennifer R. Tobey, David N. Phalen, Andrew K. Krockenberger, William Ellis, Emily Hynes, Damien P. Higgins, Kyall R. Zenger
Software Mentions: 2
Published: about 6 years ago
10.1038/s41437-018-0151-5
Genetic patterns in Neotropical Magnolias (Magnoliaceae) using de novo developed microsatellite markers
Cited by: 21
Author(s): Emily Veltjen, Pieter Asselman, Majela Hernández Rodríguez, Alejandro Palmarola, Ernesto Testé Lozano, Luis Roberto González Torres, Paul Goetghebeur, Isabel Larridon, Marie‐Stéphanie Samain
Software Mentions: 2
Published: about 6 years ago
10.1177/0959683618798116
Genetic evidence for a western Chinese origin of broomcorn millet (<i>Panicum miliaceum</i>)
Cited by: 18
Author(s): Harriet V. Hunt, Anna Rudzinski, Hongen Jiang, Ruiyun Wang, Mark G. Thomas, Martin K. Jones
Software Mentions: 2
Published: about 6 years ago
10.1038/s41438-020-00374-1
Mining and validation of novel genotyping-by-sequencing (GBS)-based simple sequence repeats (SSRs) and their application for the estimation of the genetic diversity and population structure of coconuts (Cocos nucifera L.) in Thailand
Cited by: 14
Author(s): Kanamon Riangwong, Samart Wanchana, Wanchana Aesomnuk, Chatree Saensuk, Phakchana Nubankoh, Vinitchan Ruanjaichon, Tippaya Kraithong, Theerayut Toojinda, Apichart Vanavichit, Siwaret Arikit
Software Mentions: 2
Published: about 4 years ago
10.3390/insects11020089
Wing Geometric Morphometrics of Workers and Drones and Single Nucleotide Polymorphisms Provide Similar Genetic Structure in the Iberian Honey Bee (Apis mellifera iberiensis)
Cited by: 22
Author(s): Dora Henriques, Júlio Chávez-Galarza, Juliana Stephanie Galaschi Teixeira, Helena Lage Ferreira, Cátia J. Neves, Tiago Maurício Francoy, M. Alice Pinto
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.ppat.1008731
Genetic analysis reveals long-standing population differentiation and high diversity in the rust pathogen Melampsora lini
Cited by: 6
Author(s): Hanna Susi, Jeremy J. Burdon, Peter H. Thrall, Adnane Nemri, Luke G. Barrett
Software Mentions: 2
Published: over 4 years ago
10.1098/rspb.2016.0798
Blood thicker than water: kinship, disease prevalence and group size drive divergent patterns of infection risk in a social mammal
Cited by: 14
Author(s): Clare H. Benton, Richard J. Delahay, Andrew Robertson, Robbie A. McDonald, Alastair J. Wilson, Terry Burke, Dave Hodgson
Software Mentions: 2
Published: over 8 years ago
10.1098/rspb.2021.0782
Divergent regional evolutionary histories of a devastating global amphibian pathogen
Cited by: 8
Author(s): Andrew P. Rothstein, Allison Q. Byrne, Roland A. Knapp, Cheryl J. Briggs, Jamie Voyles, Corinne L. Richards‐Zawacki, Erica Bree Rosenblum
Software Mentions: 2
Published: over 3 years ago
10.1098/rsos.200288
Genetic evidence further elucidates the history and extent of badger introductions from Great Britain into Ireland
Cited by: 8
Author(s): Adrian Allen, Jimena Guerrero, Andrew Byrne, John Lavery, Eleanor Presho, Emily Courcier, James O’Keeffe, Ursula Fogarty, Richard J. Delahay, Gavin Wilson, Chris Newman, Christina D. Buesching, Matthew J. Silk, Denise O'Meara, Robin Skuce, Roman Biek, Robbie A. McDonald
Software Mentions: 2
Published: over 4 years ago
10.1038/srep15618
Great influence of geographic isolation on the genetic differentiation of Myriophyllum spicatum under a steep environmental gradient
Cited by: 24
Author(s): Zhigang Wu, Dan Yu, Zhong Wang, Xing Li, Xinglong Xu
Software Mentions: 2
Published: about 9 years ago
10.1038/srep34821
Genetic evaluation of the breeding population of a valuable reforestation conifer Platycladus orientalis (Cupressaceae)
Cited by: 16
Author(s): Yuqing Jin, Yongpeng Ma, Shun Wang, Xinxin Hu, Huang Lei, Yue Li, Xiaoru Wang, Jian‐Feng Mao
Software Mentions: 2
Published: about 8 years ago
10.1038/srep39591
De novo transcriptome assembly, development of EST-SSR markers and population genetic analyses for the desert biomass willow, Salix psammophila
Cited by: 34
Author(s): Huixia Jia, Haifeng Yang, Peng Sun, Jianbo Li, Jin Zhang, Yinghua Guo, Xiaojiao Han, Guosheng Zhang, Mengzhu Lu, Jianjun Hu
Software Mentions: 2
Published: almost 8 years ago
10.1038/s41598-017-01478-w
Teosinte in Europe – Searching for the Origin of a Novel Weed
Cited by: 44
Author(s): Miluse Trtikova, André Felipe Lohn, Rosa Binimelis, Ignacio H. Chapela, Bernadette Oehen, Niklaus Zemp, Alex Widmer, Angelika Hilbeck
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-12942-y
An extinct vertebrate preserved by its living hybridogenetic descendant
Cited by: 11
Author(s): Sylvain Dubey, Christophe Dufresnes
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-017-13535-5
Stabilization of a bat-pitcher plant mutualism
Cited by: 1
Author(s): Michael G. Schöner, Caroline R. Schöner, Rebecca Ermisch, Sébastien J. Puechmaille, T. Ulmar Grafe, Moi Chan Tan, Gerald Kerth
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-017-15816-5
Assessment of Genetic Diversity and Population Structure in Iranian Cannabis Germplasm
Cited by: 40
Author(s): Aboozar Soorni, Reza Fatahi, David C. Haak, Seyed Alireza Salami, Aureliano Bombarely
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-017-17775-3
Genomic footprints of dryland stress adaptation in Egyptian fat-tail sheep and their divergence from East African and western Asia cohorts
Cited by: 37
Author(s): Joram M. Mwacharo, Eui-Soo Kim, Ahmed R. Elbeltagy, Adel Aboul-Naga, Barbara Rischkowsky, Max F. Rothschild
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-018-27351-y
Population genetic signatures of a climate change driven marine range extension
Cited by: 27
Author(s): Jorge E. Ramos, Gretta T. Pecl, Natalie A. Moltschaniwskyj, Jayson M. Semmens, Carla A. Souza, Jan M. Strugnell
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-41945-0
Ancient human mitochondrial genomes from Bronze Age Bulgaria: new insights into the genetic history of Thracians
Cited by: 5
Author(s): Alessandra Modi, Desislava Nesheva, Stefania Sarno, Stefania Vai, Sena Karachanak-Yankova, Donata Luiselli, Elena Pilli, Martina Lari, Chiara Vergata, Yordan Yordanov, Dessislava Dimitrova, Petar Kalcev, Rada Staneva, Olga Antonova, Savina Hadjidekova, Angel S. Galabov, Драга Тончева, David Caramelli
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-47729-w
Strong genetic isolation of the black-lipped pearl oyster (Pinctada margaritifera) in the Marquesas archipelago (French Polynesia)
Cited by: 5
Author(s): Céline Reisser, Cédrik Lo, David Schikorski, Manaarii Sham Koua, Serge Planes, Chin‐Long Ky
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-48472-y
Isolation-by-environment as a driver of genetic differentiation among populations of the only broad-leaved evergreen shrub Ammopiptanthus mongolicus in Asian temperate deserts
Cited by: 21
Author(s): Shan Jiang, Min Xin Luo, Run Hong Gao, Wei Zhang, Yong Zhi Yang, Ying Jie Li, Pei Chun Liao
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-48618-y
Prevalence and population genetics of the emerging honey bee pathogen DWV in Chinese apiculture
Cited by: 13
Author(s): Qingyun Diao, Dahe Yang, Hongxia Zhao, Shuai Deng, Xinling Wang, Chunsheng Hou, Lena Wilfert
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-54725-7
Bridging population genetics and the metacommunity perspective to unravel the biogeographic processes shaping genetic differentiation of Myriophyllum alterniflorum DC.
Cited by: 6
Author(s): Jorge García‐Girón, Pedro Garcı́a, Margarita Fernández‐Aláez, Eloy Bécares, Camino Fernández‐Aláez
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-020-62382-4
The effect of phylogeographic history on species boundaries: a comparative framework in Hyla tree frogs
Cited by: 15
Author(s): Christophe Dufresnes, Matthieu Berroneau, Sylvain Dubey, Spartak N. Litvinchuk, Nicolas Perrin
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-69665-w
Genetic tropicalisation following a marine heatwave
Cited by: 39
Author(s): Melinda A. Coleman, Antoine J. P. Minne, Sofie Vranken, Thomas Wernberg
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-70294-6
Temperature increase altered Daphnia community structure in artificially heated lakes: a potential scenario for a warmer future
Cited by: 16
Author(s): Marcin Krzysztof Dziuba, Magdalena Herdegen‐Radwan, Estera Pluta, Łukasz Wejnerowski, Witold Szczuciński, Sławek Cerbin
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-72112-5
Population genetic structure of the great star coral, Montastraea cavernosa, across the Cuban archipelago with comparisons between microsatellite and SNP markers
Cited by: 14
Author(s): Alexis B. Sturm, Ryan J. Eckert, Juliett González Méndez, Patricia González‐Díaz, Joshua D. Voss
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-73736-3
Molecular characteristics of Staphylococcus aureus associated prosthetic joint infections after hip fractures treated with hemiarthroplasty: a retrospective genome-wide association study
Cited by: 4
Author(s): J Christopher Noone, Marc Stegger, Berit Lilje, Knut Stavem, Karin Helmersen, Inge Skråmm, Hege Vangstein Aamot
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-021-85226-1
Detection of breeding signatures in wheat using a linkage disequilibrium-corrected mapping approach
Cited by: 18
Author(s): Said Dadshani, Boby Mathew, Agim Ballvora, Annaliese S. Mason, Jens Léon
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-021-92168-1
Genome-wide scan reveals genetic divergence in Italian Holstein cows bred within PDO cheese production chains
Cited by: 6
Author(s): Michela Ablondi, M. Malacarne, Claudio Cipolat‐Gotet, J.B.C.H.M. van Kaam, A. Sabbioni, A. Summer
Software Mentions: 2
Published: over 3 years ago
10.1128/mBio.00392-19
Nonrandom Distribution of Azole Resistance across the Global Population of Aspergillus fumigatus
Cited by: 63
Author(s): Thomas R. Sewell, Jianing Zhu, Johanna Rhodes, Ferry Hagen, Jacques F. Meis, Matthew C. Fisher, Thibaut Jombart
Software Mentions: 2
Published: over 5 years ago
10.1128/mSphere.00333-18
Diversity and Population Overlap between Avian and Human Escherichia coli Belonging to Sequence Type 95
Cited by: 55
Author(s): Stine Jørgensen, Marc Stegger, Eglė Kudirkienė, Berit Lilje, Louise K. Poulsen, Troels Ronco, Teresa Pires dos Santos, Kristoffer Kiil, Magne Bisgaard, Karl Pedersen, Lisa K. Nolan, Lance B. Price, Rikke Heidemann Olsen, Paal Skytt Andersen, Henrik Christensen
Software Mentions: 2
Published: over 5 years ago
10.7554/eLife.61921
Principles of dengue virus evolvability derived from genotype-fitness maps in human and mosquito cells
Cited by: 28
Author(s): Patrick Dolan, Shuhei Taguwa, Mauricio Aguilar Rangel, Ashley Acevedo, Tzachi Hagai, Raul Andino, Judith Frydman
Software Mentions: 2
Published: almost 4 years ago
10.1007/s00122-015-2475-3
Genome-wide association analysis reveals new targets for carotenoid biofortification in maize
Cited by: 114
Author(s): Willy Bayuardi Suwarno, K.V. Pixley, Natalia Palacios-Rojas, Shawn M. Kaeppler, Raman Babu
Software Mentions: 1
Published: almost 10 years ago
10.3389/fgene.2014.00443
Genomic adaptation of admixed dairy cattle in East Africa
Cited by: 25
Author(s): Eui-Soo Kim, Max F. Rothschild
Software Mentions: 1
Published: almost 10 years ago
10.1039/c6an00549g
Glycan heterogeneity on gold nanoparticles increases lectin discrimination capacity in label-free multiplexed bioassays
Cited by: 36
Author(s): Lucienne Otten, Denise Vlachou, Sarah‐Jane Richards, Matthew I. Gibson
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0177429
Genetic rescue of an endangered domestic animal through outcrossing with closely related breeds: A case study of the Norwegian Lundehund
Cited by: 14
Author(s): Astrid Vik Strønen, Elina Salmela, B. Baldursdottir, Peer Berg, Ingvild S. Espelien, Kirsi Jarvi, Henrik Jensen, Torsten Nygaard Kristensen, Claudia Melis, Tommaso Manenti, Hannes Lohi, Cino Pertoldi
Software Mentions: 1
Published: over 7 years ago
10.1186/1471-2229-13-25
Genetic structure in cultivated grapevines is linked to geography and human selection
Cited by: 130
Author(s): Roberto Baciliéri, Thierry Lacombe, Loïc Le Cunff, Manuel Di Vecchi-Staraz, Valérie Laucou, Blaise Genna, Jean‐Pierre Péros, Patrice This, Jean‐Michel Boursiquot
Software Mentions: 1
Published: almost 12 years ago
10.3389/fmed.2017.00251
Active Trachoma Cases in the Solomon Islands Have Varied Polymicrobial Community Structures but Do Not Associate with Individual Non-Chlamydial Pathogens of the Eye
Cited by: 16
Author(s): Robert Butcher, Oliver Sokana, Kelvin Jack, Eric Kalae, Leslie Sui, Charles J. Russell, Joanna Houghton, Christine D. Palmer, Martin J. Holland, Richard T Le Mesurier, Anthony W. Solomon, David Mabey, Chrissy h. Roberts
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0065441
Uniparental Markers in Italy Reveal a Sex-Biased Genetic Structure and Different Historical Strata
Cited by: 60
Author(s): Alessio Boattini, Begoña Martínez‐Cruz, Stefania Sarno, Christine Harmant, Antonella Useli, Paula Moreno Sanz, Yang-Yao Daniele, Jérémy Manry, Graziella Ciani, Donata Luiselli, Lluı́s Quintana-Murci, David Comas, Davide Pettener
Software Mentions: 1
Published: over 11 years ago
10.3389/fmicb.2020.01331
SSU1 Checkup, a Rapid Tool for Detecting Chromosomal Rearrangements Related to the SSU1 Promoter in Saccharomyces cerevisiae: An Ecological and Technological Study on Wine Yeast
Cited by: 9
Author(s): Philippe Marullo, Olivier Claisse, Maria Eder, Marine Börlin, Nadine Feghali, Margaux Bernard, Jean Luc Legras, Warren Albertin, Alberto L. Rosa, Isabelle Masneuf‐Pomarède
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0177481
Rapid expansion of the invasive oyster Crassostrea gigas at its northern distribution limit in Europe: Naturally dispersed or introduced?
Cited by: 27
Author(s): Marc Anglès d’Auriac, Eli Rinde, Pia Norling, Sylvie Lapègue, André Staalstrøm, Dag Øystein Hjermann, Jens Thaulow
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0147222
Colony Foundation in an Oceanic Seabird
Cited by: 21
Author(s): Ignacio Munilla, Meritxell Genovart, Vítor H. Paiva, Alberto Velando
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0083340
High-Throughput Sequencing of a South American Amerindian
Cited by: 9
Author(s): Ândrea Ribeiro-dos-Santos, Jorge Estefano Santana de Souza, Renan Valieris Bueno de Almeida, Dayse O. Alencar, Maria Silvanira Barbosa, Leonor Gusmão, Wilson A. Silva, Sandro J. de Souza, Artur M. S. Silva, Ândrea Ribeiro‐dos‐Santos, Sylvain Darnet, Sidney Emanuel Batista dos Santos
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0186866
Assessment of intra and interregional genetic variation in the Eastern Red-backed Salamander, Plethodon cinereus, via analysis of novel microsatellite markers
Cited by: 8
Author(s): Alexander C. Cameron, Jeffry J. Anderson, Robert B. Page
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-019-49958-5
Genetic structure and population connectivity of the blue and red shrimp Aristeus antennatus
Cited by: 15
Author(s): Sandra Heras, Laia Planella, José‐Luis García‐Marín, Manuel Vera, Marı́a Inés Roldán
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0130176
Novel Polymorphic Microsatellite Markers Reveal Genetic Differentiation between Two Sympatric Types of Galaxea fascicularis
Cited by: 13
Author(s): Yuichi Nakajima, Chuya Shinzato, Noriyuki Satoh, Satoshi Mitarai
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0097619
The Genetic Legacy of Multiple Beaver Reintroductions in Central Europe
Cited by: 34
Author(s): Christiane Frosch, Robert H. S. Kraus, Christof Angst, Rainer Allgöwer, Johan Michaux, Jana Teubner, Carsten Nowak
Software Mentions: 1
Published: over 10 years ago
10.1186/s12870-016-0712-9
Genetic diversity, linkage disequilibrium, population structure and construction of a core collection of Prunus avium L. landraces and bred cultivars
Cited by: 83
Author(s): José Antonio Campoy, Émilie Lerigoleur, Hélène Christmann, Rémi Beauvieux, Nabil Girollet, José Quero-García, Elisabeth Dirlewanger, Teresa Barreneche
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0148499
Outlier Loci Detect Intraspecific Biodiversity amongst Spring and Autumn Spawning Herring across Local Scales
Cited by: 24
Author(s): Dorte Bekkevold, Riho Gross, Timo Arula, Sarah J. Helyar, Henn Ojaveer
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-019-52465-2
Fine-scale population structure and ecotypes of anadromous Hilsa shad (Tenualosa ilisha) across complex aquatic ecosystems revealed by NextRAD genotyping
Cited by: 14
Author(s): Md. Asaduzzaman, Abdul Wahab, Moshiur Rahman, Nahiduzzzaman, Malcom W. Dickson, Yoji Igarashi, Shuichi Asakawa, Li Lian Wong
Software Mentions: 1
Published: about 5 years ago
10.1186/s12862-015-0519-6
Context-dependent associations between heterozygosity and immune variation in a wild carnivore
Cited by: 8
Author(s): Patrick M. Brock, Simon J. Goodman, Ailsa J. Hall, Marilyn Cruz, Karina Acevedo‐Whitehouse
Software Mentions: 1
Published: about 9 years ago
10.3389/fpls.2021.630122
Georgian Grapevine Cultivars: Ancient Biodiversity for Future Viticulture
Cited by: 21
Author(s): Maryam Sargolzaei, Laura Rustioni, Gabriele Cola, Valentina Ricciardi, P.A. Bianco, D. Maghradze, O. Failla, F. Quaglino, Silvia Laura Toffolatti, Gabriella De Lorenzis
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0171387
Blue cheese-making has shaped the population genetic structure of the mould Penicillium roqueforti
Cited by: 25
Author(s): Jeanne Ropars, Manuela López‐Villavicencio, Alodie Snirc, Sandrine Lacoste, Tatiana Giraud
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0238984
Genome-wide genetic diversity and population structure of Garcinia kola (Heckel) in Benin using DArT-Seq technology
Cited by: 6
Author(s): Colombe Dadjo, Aggrey Bernard Nyende, Nasser Yao, Kiplangat Ngeno, Achille Ephrem Assogbadjo
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0174269
Rethinking the influence of hydroelectric development on gene flow in a long-lived fish, the Lake Sturgeon Acipenser fulvescens
Cited by: 17
Author(s): C. A. McDougall, Amy B. Welsh, Thierry Gosselin, W. Gary Anderson, Patrick A. Nelson
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0072726
Heritability and Inter-Population Differences in Lipid Profiles of Drosophila melanogaster
Cited by: 30
Author(s): Cornelia Johanna Franziska Scheitz, Yu Guo, Angela M. Early, Lawrence G. Harshman, Andrew G. Clark
Software Mentions: 1
Published: about 11 years ago
10.1038/s41598-019-55147-1
A Biogeographic Barrier Test Reveals a Strong Genetic Structure for a Canopy-Emergent Amazon Tree Species
Cited by: 13
Author(s): Alison G. Nazareno, Christopher W. Dick, Lúcia G. Lohmann
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0157972
Reduced Genetic Diversity and Increased Structure in American Mink on the Swedish Coast following Invasive Species Control
Cited by: 17
Author(s): Andrzej Zalewski, Hanna Zalewska, Sven-Gunnar Lunneryd, Carl André, Grzegorz Mikusiński
Software Mentions: 1
Published: over 8 years ago
10.3389/fpls.2017.00159
Local Climate Heterogeneity Shapes Population Genetic Structure of Two Undifferentiated Insular Scutellaria Species
Cited by: 7
Author(s): Huan Yi Hsiung, Bing Huang, Jui Tse Chang, Yao Huang, Chih-Wei Huang, Pei Chun Liao
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0226556
Clonality, spatial structure, and pathogenic variation in Fusarium fujikuroi from rain-fed rice in southern Laos
Cited by: 3
Author(s): Barbara Scherm, Virgilio Balmas, A. Infantino, Maria Aragona, Maria Teresa Valente, Francesca Desiderio, Angela Marcello, Sengphet Phanthavong, L. W. Burgess, Domenico Rau
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0037063
Tetraploid Wheat Landraces in the Mediterranean Basin: Taxonomy, Evolution and Genetic Diversity
Cited by: 67
Author(s): Hugo R. Oliveira, Michael G. Campana, Huw Jones, Harriet V. Hunt, Fiona Leigh, David Redhouse, Diane Lister, Martin K. Jones
Software Mentions: 1
Published: over 12 years ago
10.3389/fpls.2017.01277
Genetic Diversity within a Global Panel of Durum Wheat (Triticum durum) Landraces and Modern Germplasm Reveals the History of Alleles Exchange
Cited by: 126
Author(s): Hafssa Kabbaj, Amadou Tidiane Sall, Ayed Al‐Abdallat, Mulatu Geleta, Ahmed Amri, Abdelkarim Filali‐Maltouf, Bouchra Belkadi, Rodomiro Ortíz, Filippo M. Bassi
Software Mentions: 1
Published: over 7 years ago
10.3389/fpls.2021.600176
Identification of Resistance Sources and Genome-Wide Association Mapping of Septoria Tritici Blotch Resistance in Spring Bread Wheat Germplasm of ICARDA
Cited by: 5
Author(s): Sara Louriki, Sajid Ur Rehman, Samira El Hanafi, Yassine Bouhouch, Muamar Al‐Jaboobi, Ahmed Amri, Allal Douira, Wuletaw Tadesse
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-019-56100-y
Ecological genomics of adaptation to unpredictability in experimental rotifer populations
Cited by: 1
Author(s): Eva Tarazona, Christoph Hahn, Lluis Franch‐Gras, Eduardo M. García‐Roger, Marı́a José Carmona, África Gómez
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0162792
Spatially Explicit Analysis of Genome-Wide SNPs Detects Subtle Population Structure in a Mobile Marine Mammal, the Harbor Porpoise
Cited by: 48
Author(s): Ljerka Lah, Daronja Trense, Harald Benke, Per Berggren, Þorvaldur Gunnlaugsson, Christina Lockyer, Ayaka Amaha Öztürk, Bayram Öztürk, Iwona Pawliczka, Anna Roos, Ursula Siebert, Krzysztof Skóra, Gísli A. Víkingsson, Ralph Tiedemann
Software Mentions: 1
Published: about 8 years ago
10.1186/s12870-016-0874-5
Dissecting maize diversity in lowland South America: genetic structure and geographic distribution models
Cited by: 12
Author(s): Mariana Bracco, Jimena Cascales, Julian Alberto Camara Hernandez, Lidia Poggio, Alexandra M. Gottlieb, Verónica Viviana Lia
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0059165
First Insights into the Genetic Diversity of the Pinewood Nematode in Its Native Area Using New Polymorphic Microsatellite Loci
Cited by: 27
Author(s): Sophie Mallez, Chantal Castagnone, Margarida Espada, Paulo Vieira, J. D. Eisenback, Manuel Mota, Thomas Guillemaud, Philippe Castagnone‐Sereno
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0186701
Genetic health and population monitoring of two small black bear (Ursus americanus) populations in Alabama, with a regional perspective of genetic diversity and exchange
Cited by: 8
Author(s): John P. Draper, Lisette P. Waits, Jennifer R. Adams, Christopher L Seals, Todd D. Steury
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0192540
Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs
Cited by: 120
Author(s): Valérie Laucou, Amandine Launay, Roberto Baciliéri, Thierry Lacombe, Anne Francëoise Adam-Blondon, Aurélie Berard, Aurélie Chauveau, M. Teresa de Andrés, Ludger Hausmann, Javier Ibáñez, Marie Christine Le Paslier, D. Maghradze, J. M. Martínez-Zapater, Erika Maul, Maharajah Ponnaiah, Reinhard Töpfer, Jean Pierre Péros, Jean Michel Boursiquot
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0152701
The Structure of Genetic Diversity in Eelgrass (Zostera marina L.) along the North Pacific and Bering Sea Coasts of Alaska
Cited by: 14
Author(s): Sandra L. Talbot, George K. Sage, Jolene R. Rearick, Megan C. Fowler, Raquel Muñíz-Salazar, Bethany Baibak, Sandy Wyllie‐Echeverria, Alejandro Cabello‐Pasini, David H. Ward
Software Mentions: 1
Published: over 8 years ago
10.1186/s12870-020-02379-3
Identification and validation of mutation points associated with waxy phenotype in cassava
Cited by: 4
Author(s): Cátia Dias do Carmo, Massáine Bandeira e Sousa, Priscila Patrícia dos Santos Silva, Gilmara Alvarenga Fachardo Oliveira, Hernán Ceballos, Eder Jorge de Oliveira
Software Mentions: 1
Published: over 4 years ago