Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: abc

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/abc

Tools for Approximate Bayesian Computation (ABC)
12 versions
Latest release: about 2 years ago
5 dependent packages
1,414 downloads last month

Papers Mentioning abc 28

10.7554/eLife.63194
Evolutionary dynamics of transposable elements in bdelloid rotifers
Cited by: 21
Author(s): Reuben W. Nowell, Christopher G. Wilson, Pedro Almeida, Philipp H. Schiffer, Diego Fontaneto, Lutz Becks, Fernando Rodríguez, Irina R. Arkhipova, Timothy G. Barraclough
Software Mentions: 7
Published: over 3 years ago
10.1111/1755-0998.12686
<scp>multi‐dice</scp> : <scp>r</scp> package for comparative population genomic inference under hierarchical co‐demographic models of independent single‐population size changes
Cited by: 31
Author(s): Alexander T. Xue, Michael J. Hickerson
Software Mentions: 7
Published: almost 7 years ago
10.1002/ece3.5961
Do different rates of gene flow underlie variation in phenotypic and phenological clines in a montane grasshopper community?
Cited by: 4
Author(s): R. O. Slatyer, Sean D. Schoville, César R. Nufio, Lauren B. Buckley
Software Mentions: 6
Published: over 4 years ago
10.1111/eva.12676
Genomic signatures of environmental selection despite near‐panmixia in summer flounder
Cited by: 32
Author(s): Jennifer A. Hoey, Malin L. Pinsky
Software Mentions: 6
Published: almost 6 years ago
10.1111/eva.12960
Genomic insights into historical population dynamics, local adaptation, and climate change vulnerability of the East Asian Tertiary relict <i>Euptelea</i> (Eupteleaceae)
Cited by: 12
Author(s): Yanan Cao, Shanshan Zhu, Jun Chen, Hans Peter Comes, Ian Wang, Luyao Chen, Shota Sakaguchi, Ying‐Xiong Qiu
Software Mentions: 5
Published: about 4 years ago
10.7717/peerj.1910
Reconstructing the demographic history of divergence between European river and brook lampreys using approximate Bayesian computations
Cited by: 25
Author(s): Quentin Rougemont, Camille Roux, Samuel Neuenschwander, Jérôme Goudet, Sophie Launey, Guillaume Evanno
Software Mentions: 4
Published: about 8 years ago
10.1111/eva.12192
Continental‐scale patterns of pathogen prevalence: a case study on the corncrake
Cited by: 13
Author(s): Yoan Fourcade, Oskars Keišs, David S. Richardson, Jean Secondi
Software Mentions: 3
Published: over 9 years ago
10.1093/molbev/msx273
Spatial and Temporal Scales of Range Expansion in Wild Phaseolus vulgaris
Cited by: 48
Author(s): Andrea Ariani, Jorge C. Berny Mier y Teran, Paul Gepts
Software Mentions: 3
Published: over 6 years ago
10.1111/eva.12857
Twin introductions by independent invader mussel lineages are both associated with recent admixture with a native congener in Australia
Cited by: 36
Author(s): Iva Popovic, Ambrocio Melvin A. Matias, Nicolas Bierne, Cynthia Riginos
Software Mentions: 3
Published: over 4 years ago
10.1098/rsos.191149
Conformity bias in the cultural transmission of music sampling traditions
Cited by: 19
Author(s): Mason Youngblood
Software Mentions: 3
Published: over 4 years ago
10.1016/j.epidem.2019.100349
Detecting within-host interactions from genotype combination prevalence data
Cited by: 10
Author(s): Samuel Alizon, Carmen Lía Murall, Emma Saulnier, Mircea T. Sofonea
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pgen.1005877
Inferring Population Size History from Large Samples of Genome-Wide Molecular Data - An Approximate Bayesian Computation Approach
Cited by: 129
Author(s): Simon Boitard, Willy Rodríguez, Flora Jay, Stefano Mona, Frédéric Austerlitz
Software Mentions: 2
Published: about 8 years ago
10.1111/eva.12779
Coalescent models characterize sources and demographic history of recent round goby colonization of Great Lakes and inland waters
Cited by: 7
Author(s): Nicholas M. Sard, John D. Robinson, Jeannette Kanefsky, Seth J. Herbst, Kim T. Scribner
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-020-61560-8
The genetic legacy of extreme exploitation in a polar vertebrate
Cited by: 10
Author(s): Anneke J. Paijmans, Martin Stoffel, Marthán N Bester, Alison C. Cleary, P. J. Nico de Bruyn, Jaume Forcada, Michael E. Goebel, Simon Goldsworthy, Christophe Guinet, Christian Lydersen, Kit M. Kovacs, Andrew D. Lowther, Joseph I. Hoffman
Software Mentions: 2
Published: about 4 years ago
10.3389/fgene.2019.00728
Signature of the Paleo-Course Changes in the São Francisco River as Source of Genetic Structure in Neotropical Pithecopus nordestinus (Phyllomedusinae, Anura) Treefrog
Cited by: 12
Author(s): Daniel Pacheco Bruschi, Elen Arroyo Peres, Luciana Bolsoni Lourenço, Luiz Filipe de Macedo Bartoleti, Thadeu Sobral‐Souza, Shirlei Maria Recco‐Pimentel
Software Mentions: 2
Published: almost 5 years ago
10.1111/mec.12881
ABC inference of multi-population divergence with admixture from unphased population genomic data
Cited by: 53
Author(s): John D. Robinson, Lynsey Bunnefeld, Jack Hearn, Graham N. Stone, Michael J. Hickerson
Software Mentions: 2
Published: over 9 years ago
10.5936/csbj.201303001
CHROMATOGATE: A TOOL FOR DETECTING BASE MIS-CALLS IN MULTIPLE SEQUENCE ALIGNMENTS BY SEMI-AUTOMATIC CHROMATOGRAM INSPECTION
Cited by: 9
Author(s): Nikolaos Alachiotis, Emmanouella Vogiatzi, Pavlos Pavlidis, Alexandros Stamatakis
Software Mentions: 2
Published: about 11 years ago
10.1002/ece3.5708
Multiple freshwater invasions of the tapertail anchovy (Clupeiformes: Engraulidae) of the Yangtze River
Cited by: 9
Author(s): Fangyuan Cheng, Qian Wang, Pierpaolo Maisano Delser, Chenhong Li
Software Mentions: 2
Published: over 4 years ago
10.1186/s12983-015-0131-z
Out-of-the tropics or trans-tropical dispersal? The origins of the disjunct distribution of the gooseneck barnacle Pollicipes elegans
Cited by: 10
Author(s): S. Marchant, Amy L. Moran, Peter B. Marko
Software Mentions: 1
Published: over 8 years ago
10.3390/genes10080590
Gradual Distance Dispersal Shapes the Genetic Structure in an Alpine Grasshopper
Cited by: 4
Author(s): Juan Carlos Illera, Miguel Arenas, Carlos A. López-Sánchez, José Ramón Obeso, Paola Laiolo
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.ppat.1003903
Origin, Migration Routes and Worldwide Population Genetic Structure of the Wheat Yellow Rust Pathogen Puccinia striiformis f.sp. tritici
Cited by: 225
Author(s): Sajid Ali, Pierre Gladieux, Marc Leconte, Angélique Gautier, Annemarie Fejer Justesen, Mogens S. Hovmøller, Jérôme Enjalbert, C. de Vallavieille‐Pope
Software Mentions: 1
Published: over 10 years ago
10.1098/rsos.171060
Sweepstake evolution revealed by population-genetic analysis of copy-number alterations in single genomes of breast cancer
Cited by: 18
Author(s): Mamoru Kato, Daniel A. Vasco, Ryuichi P. Sugino, Daichi Narushima, Alexander Krasnitz
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-61793-7
The Early Peopling of the Philippines based on mtDNA
Cited by: 14
Author(s): Miguel Arenas, Amaya Gorostiza, Juan Miguel Baquero, Elena Campoy, Catarina Aguiar Branco, Héctor Rangel-Villalobos, Antonio González-Martı́n
Software Mentions: 1
Published: about 4 years ago
10.7717/peerj.3530
Demographic inference through approximate-Bayesian-computation skyline plots
Cited by: 13
Author(s): Miguel Navascués, Raphaël Leblois, Concetta Burgarella
Software Mentions: 1
Published: almost 7 years ago
10.1155/2013/210646
Selecting Summary Statistics in Approximate Bayesian Computation for Calibrating Stochastic Models
Cited by: 21
Author(s): Tom Burr, Alexei N. Skurikhin
Software Mentions: 1
Published: over 11 years ago
10.1038/srep18608
Contributions of multiple refugia during the last glacial period to current mainland populations of Korean pine (Pinus koraiensis)
Cited by: 22
Author(s): Lei Bao, Ayijiamali Kudureti, Wei‐Ning Bai, Rongzhang Chen, Tianming Wang, Hongfang Wang, Jianping Ge
Software Mentions: 1
Published: over 8 years ago
10.1111/evo.12234
RATES OF FITNESS DECLINE AND REBOUND SUGGEST PERVASIVE EPISTASIS
Cited by: 92
Author(s): Lília Perfeito, Ana Sousa, Thomas Bataillon, Isabel Gordo
Software Mentions: 1
Published: over 10 years ago
10.1038/s41598-017-17042-5
Genetic analyses favour an ancient and natural origin of elephants on Borneo
Cited by: 12
Author(s): Reeta Sharma, Benoît Goossens, Rasmus Heller, Rita Rasteiro, Nurzhafarina Othman, Michael William Bruford, Lounès Chikhi
Software Mentions: 1
Published: over 6 years ago