Projects: cran: aSPU
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/aSPU
Adaptive Sum of Powered Score Test
17 versions
Latest release: over 4 years ago
1 dependent package
389 downloads last month
Enhanced Analysis
Educational Contributors:
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Repository Activity:
Repository Owner:
Il-Youp Kwak (user)
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+8
Academic maintainer emails
1 maintainers with academic email addresses -
+380
Educational commit emails
19 contributors with educational email addresses -
+22
Science terms in README
11 scientific terms found in README
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning aSPU 11
10.1186/s13073-016-0302-3
An adaptive association test for microbiome dataCited by: 63
Author(s): Chong Wu, Jun Chen, Junghi Kim, Wei Pan
Software Mentions: 6
Published: almost 10 years ago
10.1186/s12920-020-0684-3
Adaptive Fisher method detects dense and sparse signals in association analysis of SNV setsCited by: 2
Author(s): Xiaoyu Cai, Lo‐Bin Chang, Jordan Potter, Chi Song
Software Mentions: 4
Published: almost 6 years ago
10.1186/s40168-018-0517-1
A two-stage microbial association mapping framework with advanced FDR controlCited by: 28
Author(s): Jiyuan Hu, Hyunwook Koh, Linchen He, Menghan Liu, Martin J. Blaser, Huilin Li
Software Mentions: 3
Published: over 7 years ago
10.1186/s12859-020-3511-0
TS: a powerful truncated test to detect novel disease associated genes using publicly available gWAS summary dataCited by: 1
Author(s): Jianjun Zhang, Xuan Guo, Samantha Gonzales, Jingjing Yang, Xuexia Wang
Software Mentions: 3
Published: almost 6 years ago
10.1186/s12859-018-2066-9
Pathway-based approach using hierarchical components of rare variants to analyze multiple phenotypesCited by: 5
Author(s): Sung Young Lee, Yongkang Kim, Sungkyoung Choi, Heungsun Hwang, Taesung Park
Software Mentions: 3
Published: almost 8 years ago
10.1371/journal.pgen.1006122
A Powerful Procedure for Pathway-Based Meta-analysis Using Summary Statistics Identifies 43 Pathways Associated with Type II Diabetes in European PopulationsCited by: 35
Author(s): Han Zhang, William Wheeler, Paula L. Hyland, Yifan Yang, Jianxin Shi, Nilanjan Chatterjee, Kai Yu
Software Mentions: 3
Published: over 9 years ago
10.7717/peerj.2139
Utilizing mutual information for detecting rare and common variants associated with a categorical traitCited by: 4
Author(s): Lei Sun, Chan Wang, Yue‐Qing Hu
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pgen.1008081
FunSPU: A versatile and adaptive multiple functional annotation-based association test of whole-genome sequencing dataCited by: 16
Author(s): Yiding Ma, Peng Wei
Software Mentions: 2
Published: almost 7 years ago
10.1534/g3.116.035485
On Robust Association Testing for Quantitative Traits and Rare VariantsCited by: 10
Author(s): Peng Wei, Ying Cao, Yiwei Zhang, Zhiyuan Xu, Il-Youp Kwak, Eric Boerwinkle, Wei Pan
Software Mentions: 2
Published: over 9 years ago
10.1186/s12864-021-07745-5
Multi-ethnic genome-wide association analyses of white blood cell and platelet traits in the Population Architecture using Genomics and Epidemiology (PAGE) studyCited by: 7
Author(s): Yao Hu, Stephanie A. Bien, Katherine K. Nishimura, Jeffrey Haessler, Chani J. Hodonsky, Antoine Baldassari, Heather M. Highland, Zhe Wang, Michael Preuss, Colleen M. Sitlani, Genevieve L. Wojcik, Ran Tao, Mariaelisa Graff, Laura Huckins, Quan Sun, Ming-Huei Chen, Abdou Mousas, Paul L. Auer, Guillaume Lettre, Weihong Tang, Lihong Qi, Bharat Thyagarajan, Steven Buyske, Myriam Fornage, Lucia A. Hindorff, Yun Li, Danyu Lin, Alexander P. Reiner, Kari E. North, Ruth J.F. Loos, Laura M. Raffield, Ulrike Peters, Christy L. Avery, Charles Kooperberg
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12919-018-0126-9
An adaptive gene-based test for methylation dataCited by: 2
Author(s): Chong Wu, Jun Young Park, Weihua Guan, Wei Pan
Software Mentions: 1
Published: over 7 years ago