Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: WhatIf
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/WhatIf
Software for Evaluating Counterfactuals
8 versions
Latest release: almost 4 years ago
1 dependent package
237 downloads last month
Papers Mentioning WhatIf 17
10.1371/journal.pone.0255667
Towards a better characterisation of deep-diving whales’ distributions by using prey distribution model outputs?Cited by: 7
Author(s): Auriane Virgili, Laura Hedon, Matthieu Authier, Beatriz Calmettes, Diane Claridge, Timothy V. N. Cole, Peter J. Corkeron, Ghislain Dorémus, Charlotte Dunn, Timothy E. Dunn, Sophie Laran, Patrick Lehodey, Mark Lewis, Maité Louzao, Laura Mannocci, José Martínez‐Cedeira, Pascal Monestiez, Debra L. Palka, Emeline Pettex, Jason J. Roberts, Leire Ruiz, Camilo Saavedra, M.B. Santos, Olivier Van Canneyt, José Antonio Vázquez Bonales, Vincent Ridoux
Software Mentions: 6
Published: about 3 years ago
10.3389/fmicb.2016.00901
Reconstruction of the High-Osmolarity Glycerol (HOG) Signaling Pathway from the Halophilic Fungus Wallemia ichthyophaga in Saccharomyces cerevisiaeCited by: 8
Author(s): Tilen Konte, Ulrich Terpitz, Ana Plemenitaš
Software Mentions: 3
Published: over 8 years ago
10.6026/97320630014414
Screening and analysis of acetyl-cholinesterase (AChE) inhibitors in the context of Alzheimer’s diseaseCited by: 7
Author(s): Mohd Babu Khan, Bhagath Kumar Palaka, Tuleshwori Devi Sapam, Naidu Subbarao, Dinakara Rao Ampasala
Software Mentions: 3
Published: about 6 years ago
10.1186/s12858-016-0057-x
Characterization of a cold-active and salt tolerant esterase identified by functional screening of Arctic metagenomic librariesCited by: 33
Author(s): Concetta De Santi, Bjørn Altermark, Marcin Pierechod, Luca Ambrosino, Donatella de Pascale, Nils Peder Willassen
Software Mentions: 2
Published: over 8 years ago
10.1186/1471-2105-12-48
A quality metric for homology modeling: the H-factorCited by: 18
Author(s): Eric di Luccio, Patrice Koehl
Software Mentions: 2
Published: over 13 years ago
10.3389/fpls.2015.00440
A cupin domain-containing protein with a quercetinase activity (VdQase) regulates Verticillium dahliae's pathogenicity and contributes to counteracting host defensesCited by: 21
Author(s): Abdelbasset El Hadrami, Md. Rashidul Islam, Lorne R. Adam, Fouad Daayf
Software Mentions: 2
Published: over 9 years ago
10.3389/fpls.2020.00960
Redundant and Diversified Roles Among Selected Arabidopsis thaliana EXO70 Paralogs During Biotic Stress ResponsesCited by: 11
Author(s): Tamara Pečenková, Andrea Potocká, Martin Potocký, Jitka Ortmannová, Matěj Drs, Edita Janková Drdová, Přemysl Pejchar, Lukáš Synek, Hana Soukupová, Viktor Žárský, Fatima Cvrčková
Software Mentions: 2
Published: about 4 years ago
10.1186/2043-9113-2-18
The H-factor as a novel quality metric for homology modelingCited by: 5
Author(s): Eric di Luccio, Patrice Koehl
Software Mentions: 2
Published: over 12 years ago
10.1038/s41598-017-11437-0
Energetics and mechanism of anion permeation across formate-nitrite transportersCited by: 26
Author(s): Kalina Atkovska, Jochen S. Hub
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-020-73483-5
Molecular dynamics of the histamine H3 membrane receptor reveals different mechanisms of GPCR signal transductionCited by: 3
Author(s): Leonardo David Herrera-Zúñiga, Liliana M. Moreno‐Vargas, Luck Ballaud, José Correa‐Basurto, Diego Prada‐Gracia, David Pastré, Patrick A. Curmi, Jean‐Michel Arrang, Rachid C. Maroun
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0106936
Atomic Resolution Structure of a Protein Prepared by Non-Enzymatic His-Tag Removal. Crystallographic and NMR Study of GmSPI-2 InhibitorCited by: 8
Author(s): Edyta Kopera, Wojciech Bal, Martina Lenarčič Živković, A. S. Dvornyk, Barbara Kłudkiewicz, Krystyna Grzelak, Igor Zhukov, Włodzimierz Zagórski-Ostoja, Mariusz Jaskólski, Szymon Krzywda
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0195355
Solution scattering study of the Bacillus subtilis PgdS enzyme involved in poly-γ-glutamic acids degradationCited by: 1
Author(s): Jumei Zeng, Yipeng Jin, Zhongchuan Liu
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0156105
X-Ray Solution Scattering Study of Four Escherichia coli Enzymes Involved in Stationary-Phase MetabolismCited by: 2
Author(s): L. A. Dadinova, Eleonora V. Shtykova, Petr V. Konarev, Е. В. Родина, Natalia E. Snalina, N. N. Vorobyeva, S. A. Kurilova, T. I. Nazarova, Cy M. Jeffries, Dmitri I. Svergun
Software Mentions: 1
Published: over 8 years ago
10.7554/eLife.07296
Thermal fluctuations of immature SOD1 lead to separate folding and misfolding pathwaysCited by: 87
Author(s): Ashok Sekhar, Jessica A.O. Rumfeldt, Helen R. Broom, Colleen Doyle, Guillaume Bouvignies, Elizabeth M. Meiering, Lewis E. Kay
Software Mentions: 1
Published: about 9 years ago
10.1186/1758-2946-1-13
Fast automated placement of polar hydrogen atoms in protein-ligand complexesCited by: 53
Author(s): Tobias Lippert, Matthias Rarey
Software Mentions: 1
Published: about 15 years ago
10.1371/journal.pcbi.1001000
How Cations Can Assist DNase I in DNA Binding and HydrolysisCited by: 60
Author(s): Marc Guéroult, Daniel Picot, Joséphine Abi-Ghanem, Brigitte Hartmann, Marc Baaden
Software Mentions: 1
Published: almost 14 years ago
10.1038/s41598-018-19842-9
Assessing cetacean surveys throughout the Mediterranean Sea: a gap analysis in environmental spaceCited by: 41
Author(s): Laura Mannocci, Jason J. Roberts, Patrick N. Halpin, Matthieu Authier, Oliver Boisseau, Mohamed Nejmeddine Bradaï, Ana Cañadas, Carla A. Chicote, Léa David, Nathalie Di‐Méglio, Caterina Maria Fortuna, Alexandros Frantzis, Manel Gazo, Tilen Genov, Philip S. Hammond, Draško Holcer, Kristin Kaschner, D Kerem, Giancarlo Lauriano, Tim Lewis, Giuseppe Notarbartolo di Sciara, Simone Panigada, Juan Antonio Raga, Aviad Scheinin, Vincent Ridoux, Adriana Vella, Janis Vella
Software Mentions: 1
Published: over 6 years ago