Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: WhatIf

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/WhatIf

Software for Evaluating Counterfactuals
8 versions
Latest release: about 4 years ago
1 dependent package
237 downloads last month

Papers Mentioning WhatIf 17

Towards a better characterisation of deep-diving whales’ distributions by using prey distribution model outputs?
Cited by: 7
Author(s): Auriane Virgili, Laura Hedon, Matthieu Authier, Beatriz Calmettes, Diane Claridge, Timothy V. N. Cole, Peter J. Corkeron, Ghislain Dorémus, Charlotte Dunn, Timothy E. Dunn, Sophie Laran, Patrick Lehodey, Mark Lewis, Maité Louzao, Laura Mannocci, José Martínez‐Cedeira, Pascal Monestiez, Debra L. Palka, Emeline Pettex, Jason J. Roberts, Leire Ruiz, Camilo Saavedra, M.B. Santos, Olivier Van Canneyt, José Antonio Vázquez Bonales, Vincent Ridoux
Software Mentions: 6
Published: over 3 years ago

10.3389/fmicb.2016.00901

Reconstruction of the High-Osmolarity Glycerol (HOG) Signaling Pathway from the Halophilic Fungus Wallemia ichthyophaga in Saccharomyces cerevisiae
Cited by: 8
Author(s): Tilen Konte, Ulrich Terpitz, Ana Plemenitaš
Software Mentions: 3
Published: over 8 years ago

10.6026/97320630014414

Screening and analysis of acetyl-cholinesterase (AChE) inhibitors in the context of Alzheimer’s disease
Cited by: 7
Author(s): Mohd Babu Khan, Bhagath Kumar Palaka, Tuleshwori Devi Sapam, Naidu Subbarao, Dinakara Rao Ampasala
Software Mentions: 3
Published: about 6 years ago

10.1186/s12858-016-0057-x

Characterization of a cold-active and salt tolerant esterase identified by functional screening of Arctic metagenomic libraries
Cited by: 33
Author(s): Concetta De Santi, Bjørn Altermark, Marcin Pierechod, Luca Ambrosino, Donatella de Pascale, Nils Peder Willassen
Software Mentions: 2
Published: almost 9 years ago

10.1186/1471-2105-12-48

A quality metric for homology modeling: the H-factor
Cited by: 18
Author(s): Eric di Luccio, Patrice Koehl
Software Mentions: 2
Published: almost 14 years ago

10.3389/fpls.2015.00440

A cupin domain-containing protein with a quercetinase activity (VdQase) regulates Verticillium dahliae's pathogenicity and contributes to counteracting host defenses
Cited by: 21
Author(s): Abdelbasset El Hadrami, Md. Rashidul Islam, Lorne R. Adam, Fouad Daayf
Software Mentions: 2
Published: over 9 years ago

10.3389/fpls.2020.00960

Redundant and Diversified Roles Among Selected Arabidopsis thaliana EXO70 Paralogs During Biotic Stress Responses
Cited by: 11
Author(s): Tamara Pečenková, Andrea Potocká, Martin Potocký, Jitka Ortmannová, Matěj Drs, Edita Janková Drdová, Přemysl Pejchar, Lukáš Synek, Hana Soukupová, Viktor Žárský, Fatima Cvrčková
Software Mentions: 2
Published: over 4 years ago

10.1186/2043-9113-2-18

The H-factor as a novel quality metric for homology modeling
Cited by: 5
Author(s): Eric di Luccio, Patrice Koehl
Software Mentions: 2
Published: almost 13 years ago

10.1038/s41598-017-11437-0

Energetics and mechanism of anion permeation across formate-nitrite transporters
Cited by: 26
Author(s): Kalina Atkovska, Jochen S. Hub
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-020-73483-5

Molecular dynamics of the histamine H3 membrane receptor reveals different mechanisms of GPCR signal transduction
Cited by: 3
Author(s): Leonardo David Herrera-Zúñiga, Liliana M. Moreno‐Vargas, Luck Ballaud, José Correa‐Basurto, Diego Prada‐Gracia, David Pastré, Patrick A. Curmi, Jean‐Michel Arrang, Rachid C. Maroun
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0106936

Atomic Resolution Structure of a Protein Prepared by Non-Enzymatic His-Tag Removal. Crystallographic and NMR Study of GmSPI-2 Inhibitor
Cited by: 8
Author(s): Edyta Kopera, Wojciech Bal, Martina Lenarčič Živković, A. S. Dvornyk, Barbara Kłudkiewicz, Krystyna Grzelak, Igor Zhukov, Włodzimierz Zagórski-Ostoja, Mariusz Jaskólski, Szymon Krzywda
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0195355

Solution scattering study of the Bacillus subtilis PgdS enzyme involved in poly-γ-glutamic acids degradation
Cited by: 1
Author(s): Jumei Zeng, Yipeng Jin, Zhongchuan Liu
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0156105

X-Ray Solution Scattering Study of Four Escherichia coli Enzymes Involved in Stationary-Phase Metabolism
Cited by: 2
Author(s): L. A. Dadinova, Eleonora V. Shtykova, Petr V. Konarev, Е. В. Родина, Natalia E. Snalina, N. N. Vorobyeva, S. A. Kurilova, T. I. Nazarova, Cy M. Jeffries, Dmitri I. Svergun
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.07296

Thermal fluctuations of immature SOD1 lead to separate folding and misfolding pathways
Cited by: 87
Author(s): Ashok Sekhar, Jessica A.O. Rumfeldt, Helen R. Broom, Colleen Doyle, Guillaume Bouvignies, Elizabeth M. Meiering, Lewis E. Kay
Software Mentions: 1
Published: over 9 years ago

10.1186/1758-2946-1-13

Fast automated placement of polar hydrogen atoms in protein-ligand complexes
Cited by: 53
Author(s): Tobias Lippert, Matthias Rarey
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pcbi.1001000

How Cations Can Assist DNase I in DNA Binding and Hydrolysis
Cited by: 60
Author(s): Marc Guéroult, Daniel Picot, Joséphine Abi-Ghanem, Brigitte Hartmann, Marc Baaden
Software Mentions: 1
Published: about 14 years ago

10.1038/s41598-018-19842-9

Assessing cetacean surveys throughout the Mediterranean Sea: a gap analysis in environmental space
Cited by: 41
Author(s): Laura Mannocci, Jason J. Roberts, Patrick N. Halpin, Matthieu Authier, Oliver Boisseau, Mohamed Nejmeddine Bradaï, Ana Cañadas, Carla A. Chicote, Léa David, Nathalie Di‐Méglio, Caterina Maria Fortuna, Alexandros Frantzis, Manel Gazo, Tilen Genov, Philip S. Hammond, Draško Holcer, Kristin Kaschner, D Kerem, Giancarlo Lauriano, Tim Lewis, Giuseppe Notarbartolo di Sciara, Simone Panigada, Juan Antonio Raga, Aviad Scheinin, Vincent Ridoux, Adriana Vella, Janis Vella
Software Mentions: 1
Published: almost 7 years ago