Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: SimRAD
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SimRAD
Simulations to Predict the Number of RAD and GBS Loci
4 versions
Latest release: almost 9 years ago
192 downloads last month
Papers Mentioning SimRAD 11
10.1111/eva.12965
Relative genomic impacts of translocation history, hatchery practices, and farm selection in Pacific oyster <i>Crassostrea gigas</i> throughout the Northern HemisphereCited by: 11
Author(s): Ben J. G. Sutherland, Claire Rycroft, Anne‐Laure Ferchaud, Rob Saunders, Li Li, Sheng Liu, Amy M. Chan, Sarah P. Otto, Curtis A. Suttle, Kristina M. Miller
Software Mentions: 13
Published: over 4 years ago
10.1186/s12864-021-07917-3
Facilitating population genomics of non-model organisms through optimized experimental design for reduced representation sequencingCited by: 6
Author(s): Henrik Christiansen, Franz M. Heindler, Bart Hellemans, Quentin Jossart, Francesca Pasotti, Henri Robert, Marie Verheye, Bruno Danis, Marc Kochzius, Frédérik Leliaert, Camille Moreau, Tasnim Patel, Anton P. Van de Putte, Ann Vanreusel, Filip Volckaert, Isa Schön
Software Mentions: 7
Published: over 3 years ago
10.1002/ece3.4457
Habitat or temporal isolation: Unraveling herbivore-parasitoid speciation patterns using double digest RADseqCited by: 9
Author(s): Y. Miles Zhang, Amber Bass, Diana Catalina Fernández, Barbara J. Sharanowski
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0223953
Genomic impact of severe population decline in a nomadic songbirdCited by: 14
Author(s): Ross Crates, George Olah, Marcin Adamski, Nicola Aitken, Samuel Banks, Dean Ingwersen, Louis Ranjard, Laura Rayner, Dejan Stojanović, Tomasz Suchan, Brenton von Takach, Robert Heinsohn
Software Mentions: 4
Published: about 5 years ago
10.1186/s12859-017-1592-1
TreeToReads - a pipeline for simulating raw reads from phylogeniesCited by: 14
Author(s): Emily Jane McTavish, James B. Pettengill, Steven R. Davis, Hugh Rand, Errol Strain, Marc W. Allard, Ruth Timme
Software Mentions: 3
Published: over 7 years ago
10.1002/ece3.5434
Last exit before the brink: Conservation genomics of the Cambodian population of the critically endangered southern river terrapinCited by: 9
Author(s): F. Gözde Çilingir, Adeline Seah, Brian D. Horne, Sitha Som, David P. Bickford
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0167723
Three Molecular Markers Show No Evidence of Population Genetic Structure in the Gouldian Finch (Erythrura gouldiae)Cited by: 11
Author(s): Peri E. Bolton, Andrea J. West, Adam P. A. Cardilini, J. Alan Clark, Kimberly Maute, Sarah Legge, James Brazill‐Boast, Simon C. Griffith, Lee A. Rollins
Software Mentions: 2
Published: about 8 years ago
10.3389/fpls.2020.00694
A Cost Reduced Variant of Epi-Genotyping by Sequencing for Studying DNA Methylation in Non-model OrganismsCited by: 12
Author(s): Olaf Werner, Ángela S. Prudencio, Elena de la Cruz-Martínez, Marta Nieto‐Lugilde, P. Martínez-Gómez, Rosa M. Ros
Software Mentions: 2
Published: over 4 years ago
10.1111/raq.12193
Applications of genotyping by sequencing in aquaculture breeding and geneticsCited by: 170
Author(s): Diego Robledo, Christos Palaiokostas, Luca Bargelloni, Paulino Martı́nez, Ross D. Houston
Software Mentions: 2
Published: almost 8 years ago
10.1002/ece3.2110
Adaptive genetic variation distinguishes Chilean blue mussels (<i>Mytilus chilensis</i>) from different marine environmentsCited by: 51
Author(s): Cristián Araneda, María Angélica Larraín, Benjamin C. Hecht, Shawn R. Narum
Software Mentions: 1
Published: over 8 years ago
10.1098/rsos.180608
Towards population genomics in non-model species with large genomes: a case study of the marine zooplankton<i>Calanus finmarchicus</i>Cited by: 31
Author(s): Marvin Choquet, Irina Smolina, Anusha K. S. Dhanasiri, Leocadio Blanco-Bercial, Martina Kopp, Alexander Jueterbock, Arvind Sundaram, Galice Hoarau
Software Mentions: 1
Published: almost 6 years ago