Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: SimInf

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SimInf

A Framework for Data-Driven Stochastic Disease Spread Simulations
27 versions
Latest release: almost 2 years ago
2 dependent packages
381 downloads last month

Papers Mentioning SimInf 10

Use of Network Analysis and Spread Models to Target Control Actions for Bovine Tuberculosis in a State from Brazil
Cited by: 4
Author(s): Nicolás Céspedes Cárdenas, Pilar Pozo, Francisco Paulo Nunes Lopes, José Henrique Hildebrand Grisi-Filho, Julio Álvarez
Software Mentions: 7
Published: almost 4 years ago

10.1186/s13567-021-00924-y

Sheep scab transmission: a spatially explicit dynamic metapopulation model
Cited by: 5
Author(s): Emily Nixon, Ellen Brooks-Pollock, Richard Wall
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pcbi.1007342

EMULSION: Transparent and flexible multiscale stochastic models in human, animal and plant epidemiology
Cited by: 17
Author(s): Sébastien Picault, Yili Huang, Vianney Sicard, Sandie Arnoux, Gaël Beaunée, Pauline Ezanno
Software Mentions: 2
Published: over 5 years ago

10.1186/s13567-018-0574-2

Spatio-temporal modelling of verotoxigenic Escherichia coli O157 in cattle in Sweden: exploring options for control
Cited by: 20
Author(s): Stefan Widgrén, Stefan Engblom, Ulf Emanuelson, Ann Lindberg
Software Mentions: 2
Published: over 6 years ago

10.3389/fvets.2020.00385

Data-Driven Network Modeling as a Framework to Evaluate the Transmission of Piscine Myocarditis Virus (PMCV) in the Irish Farmed Atlantic Salmon Population and the Impact of Different Mitigation Measures
Cited by: 1
Author(s): Tadaishi Yatabe, Beatriz Martínez‐López, José Manuel Díaz Cao, Fiona Geoghegan, Neil M. Ruane, Teresa Morrissey, McManus Catherine, Ashley E. Hill, Simon J. More
Software Mentions: 1
Published: over 4 years ago

10.3389/fvets.2020.570504

The Spread of Rabies Among Dogs in Pranburi District, Thailand: A Metapopulation Modeling Approach
Cited by: 3
Author(s): Panchiwa Komol, Sawitri Sommanosak, Parima Jaroensrisuwat, Anuwat Wiratsudakul, Kansuda Leelahapongsathon
Software Mentions: 1
Published: about 4 years ago

10.1186/s40813-020-00160-4

Modelling infectious viral diseases in swine populations: a state of the art
Cited by: 12
Author(s): Mathieu Andraud, Nicolas Rose
Software Mentions: 1
Published: over 4 years ago

10.1186/s13567-016-0366-5

Data-driven network modelling of disease transmission using complete population movement data: spread of VTEC O157 in Swedish cattle
Cited by: 19
Author(s): Stefan Widgrén, Stefan Engblom, Pavol Bauer, Jenny Frössling, Ulf Emanuelson, Ann Lindberg
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pntd.0009581

Modelling the influence of naturally acquired immunity from subclinical infection on outbreak dynamics and persistence of rabies in domestic dogs
Cited by: 2
Author(s): Susannah Gold, Christl A. Donnelly, Rosie Woodroffe, Pierre Nouvellet
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0230257

A between-herd data-driven stochastic model to explore the spatio-temporal spread of hepatitis E virus in the French pig production network
Cited by: 7
Author(s): Morgane Salines, Mathieu Andraud, Nicolas Rose, Stefan Widgrén
Software Mentions: 1
Published: over 4 years ago