cran: STAR | Projects | Ecosyste.ms: Papers

10.3389/fpsyt.2018.00597

Evaluation of the Association Between Genetic Variants in Circadian Rhythm Genes and Posttraumatic Stress Symptoms Identifies a Potential Functional Allele in the Transcription Factor TEF
Cited by: 8
Author(s): Sarah D. Linnstaedt, Yue Pan, Matthew C. Mauck, Jenyth Sullivan, Christine Zhou, Lindsey Jung, Cathleen A. Rueckeis, Jameson D Blount, Matthew S Carson, Andrew S. Tungate, Michael C. Kurz, Phyllis L. Hendry, Christopher Lewandowski, Teresa D׳Anza, Elizabeth M. Datner, Kathy Bell, Megan Lechner, Jeffrey W. Shupp, Bruce A. Cairns, Samuel A. McLean
Software Mentions: 1
Published: about 6 years ago

10.3389/fpsyt.2019.00575

Psychometric Properties of Scale to Assess the Therapeutic Relationship—JapaneseVersion (STAR-J)
Cited by: 5
Author(s): Asami Matsunaga, Sosei Yamaguchi, Utako Sawada, Takuma Shiozawa, Chiyo Fujii
Software Mentions: 1
Published: about 5 years ago

10.3389/fpsyt.2019.00690

The Three Ps: Psychiatry, Pharmacy, and Pharmacogenomics, a Brief Report From New Zealand
Cited by: 11
Author(s): Simran Maggo, Kyra L.V. Sycamore, Allison L. Miller, Martin A. Kennedy
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2020.01249

Combining a New Exome Capture Panel With an Effective varBScore Algorithm Accelerates BSA-Based Gene Cloning in Wheat
Cited by: 29
Author(s): Caixia Dong, Lichao Zhang, Zhongxu Chen, Chuan Xia, Yong–Qiang Gu, Jirui Wang, Danping Li, Zhencheng Xie, Qiang Zhang, Xueying Zhang, Lixuan Gui, Xu Liu, Xiuying Kong
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2020.00289

Management, Analyses, and Distribution of the MaizeCODE Data on the Cloud
Cited by: 3
Author(s): Liya Wang, Zhenyuan Lu, Melissa delaBastide, Peter Van Buren, Xiaofei Wang, Cornel Ghiban, Michael Regulski, Jörg Drenkow, Xiaosa Xu, Carlos Ortiz‐Ramírez, Cristina F. Marco, Sara Goodwin, Alexander Dobin, Kenneth D. Birnbaum, David Jackson, Robert A. Martienssen, W. Richard McCombie, David Micklos, Michael C. Schatz, Doreen Ware, T Gingeras
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2019.01116

Quantitative Proteomics Reveals a Role for SERINE/ARGININE-Rich 45 in Regulating RNA Metabolism and Modulating Transcriptional Suppression via the ASAP Complex in Arabidopsis thaliana
Cited by: 15
Author(s): Samuel Chen, Timothy J. Rooney, Anna Hu, Hunter S. Beard, Wesley M. Garrett, Leann M. Mangalath, Jordan J. Powers, Bret Cooper, Xiaoning Zhang
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2018.00123

Morphological and Molecular Data Reveal Three Distinct Populations of Indian Wild Rice Oryza rufipogon Griff. Species Complex
Cited by: 24
Author(s): Balwant Singh, Nisha Singh, Sanjay Mishra, Kabita Tripathi, B. P. Singh, Vandna Rai, Ashok Kumar Singh, Nagendra Singh
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12864-016-3262-5

Sequence-specific bias correction for RNA-seq data using recurrent neural networks
Cited by: 13
Author(s): Yao-Zhong Zhang, Rui Yamaguchi, Seiya Imoto, Satoru Miyano
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2017.01763

Genetic Loci Governing Grain Yield and Root Development under Variable Rice Cultivation Conditions
Cited by: 29
Author(s): Margaret Catolos, Nitika Sandhu, Shalabh Dixit, Noraziyah Abd Aziz Shamsudin, Ma. Elizabeth B. Naredo, Kenneth L. McNally, Amelia Henry, Ma. Genaleen Q. Diaz, Arvind Kumar
Software Mentions: 1
Published: about 7 years ago

10.3390/ani10061035

Analysis of lncRNAs Expression Profiles in Hair Follicle of Hu Sheep Lambskin
Cited by: 16
Author(s): Xiaoyang Lv, Wei-Hao Chen, Wei Sun, Zahid Hussain, Shanhe Wang, Jinyu Wang
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2017.00206

Genome-Wide Association and Transcriptome Analyses Reveal Candidate Genes Underlying Yield-determining Traits in Brassica napus
Cited by: 57
Author(s): Kun Lü, Peng Liu, Chao Zhang, Jianchang Lu, Bo Yang, Zhongchun Xiao, Ying Liang, Xiaozheng Xu, Cunmin Qu, Kai Zhang, Liezhao Liu, Qinlong Zhu, FU Ming-lian, Xianjun Yuan, Jiana Li
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijerph18158035

Using a 24 h Activity Recall (STAR-24) to Describe Activity in Adolescent Boys in New Zealand: Comparisons between a Sample Collected before, and a Sample Collected during the COVID-19 Lockdown
Cited by: 5
Author(s): Meredith C. Peddie, Tessa Scott, Jillian J. Haszard
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2018.00095

Development of Molecular Markers Linked to Powdery Mildew Resistance Gene Pm4b by Combining SNP Discovery from Transcriptome Sequencing Data with Bulked Segregant Analysis (BSR-Seq) in Wheat
Cited by: 45
Author(s): Peipei Wu, Jingzhong Xie, Jinghuang Hu, Dan Qiu, Yong Li, Jingting Li, Miaomiao Li, Hongjun Zhang, Li Yang, Hongwei Liu, Yang Zhou, Zhongjun Zhang, Hongjie Li
Software Mentions: 1
Published: almost 7 years ago

10.2196/24736

Examining a Digital Health Approach for Advancing Schizophrenia Illness Self-Management and Provider Engagement: Protocol for a Feasibility Trial
Cited by: 4
Author(s): Sean A. Kidd, Kwame McKenzie, Wei Wang, Sacha Agrawal, Aristotle N. Voineskos
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2018.00115

A Genomic View of Alternative Splicing of Long Non-coding RNAs during Rice Seed Development Reveals Extensive Splicing and lncRNA Gene Families
Cited by: 25
Author(s): Edward Kiegle, Alex Garden, Elia Lacchini, Martin M. Kater
Software Mentions: 1
Published: almost 7 years ago

10.3390/ijms20184387

Differential Regulation of Anthocyanins in Green and Purple Turnips Revealed by Combined De Novo Transcriptome and Metabolome Analysis
Cited by: 62
Author(s): Hongmei Zhuang, Qian Lei, Huifang Liu, Hongwei Han, Qiang Wang, Zhonghua Tang, Yanming Ma, Hao Wang
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2021.635990

Reproductive Proteins Evolve Faster Than Non-reproductive Proteins Among Solanum Species
Cited by: 11
Author(s): Leonie C. Moyle, Meng Wu, Matthew J. S. Gibson
Software Mentions: 1
Published: over 3 years ago

10.2196/27668

STAR Duodecim eHealth Tool to Recognize Chronic Disease Risk Factors and Change Unhealthy Lifestyle Choices Among the Long-Term Unemployed: Protocol for a Mixed Methods Validation Study
Cited by: 1
Author(s): Henna Kuhlberg, Sari Kujala, Iiris Hörhammer, Tuomas Koskela
Software Mentions: 1
Published: over 3 years ago

10.1007/s10162-012-0323-6

Effects of Frequency Discrimination Training on Tinnitus: Results from Two Randomised Controlled Trials
Cited by: 33
Author(s): Derek J. Hoare, Victoria L. Kowalkowski, Deborah A. Hall
Software Mentions: 1
Published: over 12 years ago

10.1186/s40425-019-0621-1

Prognostic impact of immune gene expression signature and tumor infiltrating immune cells in localized clear cell renal cell carcinoma
Cited by: 104
Author(s): Pooja Ghatalia, Jennifer B. Gordetsky, Fengshen Kuo, Essel Dulaimi, Kathy Q. Cai, Karthik Devarajan, Sejong Bae, Gurudatta Naik, Timothy A. Chan, Robert G. Uzzo, A. Ari Hakimi, Guru Sonpavde, Elizabeth R. Plimack
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-5845-4

Characterization of the bovine salivary gland transcriptome associated with Mycobacterium avium subsp. paratuberculosis experimental challenge
Cited by: 9
Author(s): S. Mallikarjunappa, Mounir Adnane, Paul Cormican, Niel A. Karrow, Kieran G. Meade
Software Mentions: 1
Published: over 5 years ago

10.1186/s40425-019-0796-5

A new synthetic toll-like receptor 1/2 ligand is an efficient adjuvant for peptide vaccination in a human volunteer
Cited by: 33
Author(s): Hans Georg Rammensee, Karl Heinz Wiesmüller, P. Anoop Chandran, Henning Zelba, Elisa Rusch, Cécile Gouttefangeas, Daniel J. Kowalewski, Moreno Di Marco, Sebastian P. Haen, Juliane S. Walz, Yamel Cardona Gloria, Johanna Bödder, Jill Marie Schertel, Antje Tunger, Luise Müller, Maximilian Kießler, Rebekka Wehner, Marc Schmitz, Meike Jakobi, Nicole Schneiderhan‐Marra, Reinhild Klein, Karoline Laske, Kerstin Artzner, Linus Backert, Heiko Schuster, Johannes Schwenck, Alexander N.R. Weber, Bernd J. Pichler, Manfred Kneilling, Christian la Fougère, Stephan Forchhammer, Gisela Metzler, Jürgen Bauer, Benjamin Weide, Wilfried Schippert, Stefan Stevanović, Markus Löffler
Software Mentions: 1
Published: about 5 years ago

10.1186/s40425-019-0758-y

Immunogenicity of prostate cancer is augmented by BET bromodomain inhibition
Cited by: 49
Author(s): Wendy Mao, Ali Ghasemzadeh, Zachary T. Freeman, Aleksandar Z. Obradovic, Matthew G. Chaimowitz, Thomas R. Nirschl, Emily McKiernan, Srinivasan Yegnasubramanian, Charles G. Drake
Software Mentions: 1
Published: about 5 years ago

10.1074/jbc.AC120.014698

Naturally occurring hotspot cancer mutations in Gα13 promote oncogenic signaling
Cited by: 18
Author(s): Marcin Maziarz, Anthony Federico, Jingyi Zhao, Lorena Dujmusic, Zhiming Zhao, Stefano Monti, Xaralabos Varelas, Mikel Garcia‐Marcos
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2020.00612

Identification of α-Amyrin 28-Carboxylase and Glycosyltransferase From Ilex asprella and Production of Ursolic Acid 28-O-β-D-Glucopyranoside in Engineered Yeast
Cited by: 4
Author(s): Xiaoyu Ji, Shumin Lin, Yuanyuan Chen, Jiawei Liu, Xiaoyun Yun, Tiancheng Wang, Jialiang Qin, Chaoquan Luo, Kui Wang, Zhongxiang Zhao, Ruoting Zhan, Hui Xu
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2020.00427

Comparative Analysis of Chitin SynthaseA dsRNA Mediated RNA Interference for Management of Crop Pests of Different Families of Lepidoptera
Cited by: 22
Author(s): Seema Rana, Ashish B. Rajurkar, K. K. Kumar, S. Mohankumar
Software Mentions: 1
Published: over 4 years ago

10.3390/ani11092706

Ad Libitum Feeding in Broiler Breeder Hens Alters the Transcriptome of Granulosa Cells of Pre-Hierarchal Follicles
Cited by: 4
Author(s): Laurie Francoeur, Claire Stephens, Patricia A. Johnson
Software Mentions: 1
Published: about 3 years ago

10.1186/s12864-021-07733-9

Characterization of nucleic acids from extracellular vesicle-enriched human sweat
Cited by: 17
Author(s): Geneviève Bart, Daniel Fischer, Anatoly Samoylenko, Artem Zhyvolozhnyi, Pavlo Stehantsev, Ilkka Miinalainen, Mika Kaakinen, Tuomas Nurmi, Prateek Singh, Susanna Kosamo, Lauri Rannaste, Sirja Viitala, Jussi Hiltunen, Seppo Vainio
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2021.710812

Diversity in Phytochemical Composition, Antioxidant Capacities, and Nutrient Contents Among Mungbean and Lentil Microgreens When Grown at Plain-Altitude Region (Delhi) and High-Altitude Region (Leh-Ladakh), India
Cited by: 12
Author(s): Priti, Gyan P. Mishra, Harsh Kumar Dikshit, T. Vinutha, Mechiya Tomuilim Tontang, Tsering Stobdan, Sheela Sangwan, Muraleedhar S. Aski, Ajeet Singh, Ranjeet Kumar, Kuldeep Tripathi, Shiv Kumar, Ramakrishnan M. Nair, Shelly Praveen
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms20184345

Functional Dissection of pri-miR-290~295 in Dgcr8 Knockout Mouse Embryonic Stem Cells
Cited by: 3
Author(s): Ming Shi, Jun Hao, Xiwen Wang, Le‐Qi Liao, Cao H, Yangming Wang
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-018-5341-2

Kinetics of the chromosome 14 microRNA cluster ortholog and its potential role during placental development in the pregnant mare
Cited by: 21
Author(s): Pouya Dini, Peter Daels, Shavahn C. Loux, A. Esteller-Vico, Mariano Carossino, Kirsten E. Scoggin, Barry A. Ball
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2016.01759

Small RNAs from Bemisia tabaci Are Transferred to Solanum lycopersicum Phloem during Feeding
Cited by: 11
Author(s): Paula J. M. van Kleeff, Marc Galland, Robert C. Schuurink, Petra Bleeker
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2020.00935

What Matters for C4 Transporters: Evolutionary Changes of Phosphoenolpyruvate Transporter for C4 Photosynthesis
Cited by: 4
Author(s): Ming‐Ju Amy Lyu, Yaling Wang, Jingchao Jiang, Xinyu Liu, Genyun Chen, Xin Guang Zhu
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2020.611140

Integrated Metabolome and Transcriptome Analyses Reveal Etiolation-Induced Metabolic Changes Leading to High Amino Acid Contents in a Light-Sensitive Japanese Albino Tea Cultivar
Cited by: 17
Author(s): Hiroto Yamashita, Yuka Kambe, Megumi Ohshio, Aya Kunihiro, Yasuno Tanaka, Toshikazu Suzuki, Yoriyuki Nakamura, Akio Morita, Takashi Ikka
Software Mentions: 1
Published: almost 4 years ago

10.1186/s40425-019-0612-2

Discovery of a novel natural killer cell line with distinct immunostimulatory and proliferative potential as an alternative platform for cancer immunotherapy
Cited by: 15
Author(s): Hyun Gul Yang, Moon Cheol Kang, Tae Yoon Kim, Injung Hwang, Hyun Tak Jin, Young Chul Sung, Ki‐Seong Eom, Sae Won Kim
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2021.697556

Transcriptome Analysis of Melocactus glaucescens (Cactaceae) Reveals Metabolic Changes During in vitro Shoot Organogenesis Induction
Cited by: 1
Author(s): Gabriela Torres-Silva, Ludmila Nayara Freitas Correia, Diego Silva Batista, Andréa Dias Koehler, Sheila Vitória Resende, Elisson Romanel, Daniela Cassol, Ana Maria Rocha de Almeida, Susan R. Strickler, Chelsea D. Specht, Wagner Campos Otoni
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms20194722

Overexpression of BpCUC2 Influences Leaf Shape and Internode Development in Betula pendula
Cited by: 9
Author(s): Chaoyi Liu, Huirong Xu, Rui Han, Shuo Wang, Guifeng Liu, Chen Su, Jiying Chen, Xiuyan Bian, Jing Jiang
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2017.00536

SNP Discovery and Genetic Variation of Candidate Genes Relevant to Heat Tolerance and Agronomic Traits in Natural Populations of Sand Rice (Agriophyllum squarrosum)
Cited by: 17
Author(s): Pengshan Zhao, Jiwei Zhang, Qian Chen, Qin Zhou, Xinquan Zhao, Guoxiong Chen, Xiaofei Ma
Software Mentions: 1
Published: over 7 years ago

10.1002/jcsm.12486

Myopalladin promotes muscle growth through modulation of the serum response factor pathway
Cited by: 23
Author(s): Maria Carmela Filomena, Daniel L. Yamamoto, Marco Caremani, Vinay Kumar Kadarla, Giuseppina Mastrototaro, Simone Serio, Anupama Vydyanath, Margherita Mutarelli, Arcamaria Garofalo, Irene Pertici, Ralph Knöll, Vincenzo Nigro, Pradeep K. Luther, Richard L. Lieber, Moriah R. Beck, Marco Linari, Marie Louise Bang
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2019.00953

Waterlogging Tolerance at Germination in Field Pea: Variability, Genetic Control, and Indirect Selection
Cited by: 13
Author(s): Samina Zaman, Al Imran Malik, Parwinder Kaur, Federico M. Ribalta, William Erskine
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-6122-2

The effects of a globin blocker on the resolution of 3’mRNA sequencing data in porcine blood
Cited by: 4
Author(s): Kyu-Sang Lim, Qian Dong, Pamela Renate Moll, Jana Vitkovska, Gregor Wiktorin, Stephanie Bannister, Dalia Daujotytė, Christopher K. Tuggle, Joan K. Lunney, Graham Plastow, Jack C. M. Dekkers
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2021.602052

Bio-Organic Fertilizer: A Green Technology to Reduce Synthetic N and P Fertilizer for Rice Production
Cited by: 19
Author(s): Umme Aminun Naher, Jatish Chandra Biswas, Md. Maniruzzaman, Faruk Hossain Khan, Md. Imran Ullah Sarkar, Afsana Jahan, Md. Hasibur Rahaman Hera, Md. Belal Hossain, A. K. M. Saiful Islam, Md. Rafiqul Islam, Md. Shahjahan Kabir
Software Mentions: 1
Published: over 3 years ago

10.3389/fphys.2020.00605

Sedentary and Trained Older Men Have Distinct Circulating Exosomal microRNA Profiles at Baseline and in Response to Acute Exercise
Cited by: 46
Author(s): Venugopalan D. Nair, Yongchao Ge, SiDe Li, Hanna Pinças, Nimisha Jain, Nitish Seenarine, Mary Anne S Amper, Bret H. Goodpaster, Martin J. Walsh, Paul M. Coen, Stuart C. Sealfon
Software Mentions: 1
Published: over 4 years ago

10.7150/jca.55553

Exosomal miR-1305 in the oncogenic activity of hypoxic multiple myeloma cells: a biomarker for predicting prognosis
Cited by: 15
Author(s): Ji Young Lee, Daeun Ryu, Se-won Lim, Kyung Ju Ryu, Myung Eun Choi, Sang Eun Yoon, Kihyun Kım, Chaehwa Park, Seok Jin Kim
Software Mentions: 1
Published: almost 4 years ago

10.7150/jca.56340

Highly deregulated lncRNA LOC is associated with overall worse prognosis in Hepatocellular Carcinoma patients
Cited by: 2
Author(s): Li Min Lim, Lay Hiang Ling, Yu Pei Neo, Alexander Chung, Brian K. P. Goh, Pierce K. H. Chow, Chung Yip Chan, Peng Chung Cheow, Ser Yee Lee, Tony Kiat-Hon Lim, Samuel S. Chong, London Lucien Ooi, Caroline Lee
Software Mentions: 1
Published: almost 4 years ago

10.20517/2394-4722.2018.84

AF1q inhibited T cell attachment to breast cancer cell by attenuating Intracellular Adhesion Molecule-1 expression
Cited by: 4
Author(s): Jino Park, Jae Yeon Hwang, Alexandra Thore, Soojin Kim, Tomiteru Togano, Shotaro Hagiwara, Juw Won Park, William Tse
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-021-07784-y

Transcriptomic coordination at hepatic steatosis indicates robust immune cell engagement prior to inflammation
Cited by: 3
Author(s): Youwen Zhang, Ioulia Chatzistamou, Hippokratis Kiaris
Software Mentions: 1
Published: over 3 years ago

10.1111/jce.14201

STAR mapping method to identify driving sites in persistent atrial fibrillation: Application through sequential mapping
Cited by: 18
Author(s): Shohreh Honarbakhsh, Richard J. Schilling, Malcolm Finlay, Emily Keating, Waqas Ullah, Ross J. Hunter
Software Mentions: 1
Published: about 5 years ago

10.1083/jcb.201908078

Analysis of copy number alterations reveals the lncRNA ALAL-1 as a regulator of lung cancer immune evasion
Cited by: 30
Author(s): Alejandro Athie, Francesco P. Marchese, Jovanna González, Teresa Lozano, Ivan Raimondi, Prasanna Kumar Juvvuna, Amaya Abad, Oskar Marín-Béjar, Jacques Serizay, Dannys Martínez, Daniel Ajona, María J. Pajares, Juan Sandoval, Luis M. Montuenga, Chandrasekhar Kanduri, Juan José Lasarte, Maite Huarte
Software Mentions: 1
Published: about 4 years ago

10.3389/fphys.2017.00849

Members of Bitter Taste Receptor Cluster Tas2r143/Tas2r135/Tas2r126 Are Expressed in the Epithelium of Murine Airways and Other Non-gustatory Tissues
Cited by: 30
Author(s): Shuya Liu, Shun Lu, Rui Xu, Ann Atzberger, Stefan Günther, Nina Wettschureck, Stefan Offermanns
Software Mentions: 1
Published: about 7 years ago

10.3389/fphys.2015.00274

RNA-seq analysis of glycosylation related gene expression in STZ-induced diabetic rat kidney inner medulla
Cited by: 15
Author(s): Xiaoqian Qian, Xuechen Li, Titilayo O. Ilori, Janet D. Klein, Rebecca P. Hughey, Congjun Li, Abdel A. Alli, Zhengyu Guo, Peng Yu, Xiang Song, Guangping Chen
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-017-4414-y

Computational approach to discriminate human and mouse sequences in patient-derived tumour xenografts
Cited by: 51
Author(s): Maurizio Callari, Ankita Batra, R N Batra, Stephen‐John Sammut, Wendy Greenwood, Harry Clifford, Colin Hercus, Suet Feung Chin, Alejandra Bruna, Oscar M. Rueda, Carlos Caldas
Software Mentions: 1
Published: almost 7 years ago

10.3389/fphys.2020.01003

Possible Assessment of Calf Venous Pump Efficiency by Computational Fluid Dynamics Approach
Cited by: 2
Author(s): Gianni Niccolini, A. Manuello, Antonio Capone, Giuseppe Marongiu, A Dell'Osa, Andrea Fois, Fernanda Velluzzi, Alberto Concu
Software Mentions: 1
Published: about 4 years ago

10.1111/jcmm.15702

BMP2 signalling activation enhances bone metastases of non‐small cell lung cancer
Cited by: 19
Author(s): Fei Huang, Cao Yun, Gui Wu, Junying Chen, CaihongWang, Wanzun Lin, Ruilong Lan, Bing Wu, Xianhe Xie, Jinsheng Hong, Liya Fu
Software Mentions: 1
Published: over 4 years ago

10.1186/s12864-020-07304-4

Comparative evaluation for the globin gene depletion methods for mRNA sequencing using the whole blood-derived total RNAs
Cited by: 9
Author(s): Jin Sung Jang, Brianna Berg, Eileen L. Holicky, Bruce W. Eckloff, Mark M. Mutawe, Minerva M. Carrasquillo, Nilüfer Ertekin-Taner, Julie M. Cuninngham
Software Mentions: 1
Published: almost 4 years ago

10.3390/ani10020253

Combinatorial Discriminant Analysis Applied to RNAseq Data Reveals a Set of 10 Transcripts as Signatures of Exposure of Cattle to Mycobacterium avium subsp. paratuberculosis
Cited by: 4
Author(s): M. Malvisi, Nico Curti, Daniel Remondini, Maria Grazia De Iorio, Fiorentina Palazzo, G. Gandini, Silvia Vitali, M. Polli, J. L. Williams, Giulietta Minozzi
Software Mentions: 1
Published: almost 5 years ago

10.3389/fphys.2018.00597

Characterization of an Atypical Metalloproteinase Inhibitors Like Protein (Sbp8-1) From Scallop Byssus
Cited by: 9
Author(s): Xiaokang Zhang, Xiaoting Dai, Lulu Wang, Yanqing Miao, Pingping Xu, Pengyu Liang, Bo Dong, Zhenmin Bao, Shi Wang, Qianqian Lyu, Weizhi Liu
Software Mentions: 1
Published: over 6 years ago

10.3389/fphys.2018.01426

Twist1-Haploinsufficiency Selectively Enhances the Osteoskeletal Capacity of Mesoderm-Derived Parietal Bone Through Downregulation of Fgf23
Cited by: 9
Author(s): Natalina Quarto, Siny Shailendra, Nathaniel P. Meyer, Siddharth Menon, Andrea Renda, Michael T. Longaker
Software Mentions: 1
Published: about 6 years ago

10.3389/fphys.2018.00817

Age-Related Differential Structural and Transcriptomic Responses in the Hypertensive Heart
Cited by: 6
Author(s): Francine Z. Marques, Po‐Yin Chu, Mark Ziemann, Antony Kaspi, Helen Kiriazis, Xiao Jun Du, Assam El‐Osta, David M. Kaye
Software Mentions: 1
Published: over 6 years ago

10.3389/fphys.2020.575722

The Study of Angptl4-Modulated Podocyte Injury in IgA Nephropathy
Cited by: 3
Author(s): Jingquan Sha, Xing Peng, Ludan Liang, Ying Zhang, Meng Li, Qin Zhou, Xiaohua Shen, Yucheng Wang, Cuili Wang, Shi Feng, Jianghua Chen, Pingping Ren, Hong Jiang
Software Mentions: 1
Published: almost 4 years ago

10.3389/fphys.2020.01010

Expression Profiles of CircRNA and mRNA in Lacrimal Glands of AQP5–/– Mice With Primary Dry Eye
Cited by: 16
Author(s): Yaning Liu, Guohu Di, Shaohua Hu, Tianyu Zhao, Xinkai Xu, Xiaoyi Wang, Peng Chen
Software Mentions: 1
Published: about 4 years ago

10.3389/fphys.2018.00522

Long Non-coding RNAs in Endothelial Biology
Cited by: 20
Author(s): Tyler Weirick, Giuseppe Militello, Shizuka Uchida
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2020.615287

Prospective: Evolution of Chinese Medicine to Treat COVID-19 Patients in China
Cited by: 10
Author(s): Jieya Wu, Baoguo Sun, Li Hou, Fulan Guan, Liyuan Wang, Peikwen Cheng, Sophia Scobell, Yung‐Chi Cheng, Wing Lam
Software Mentions: 1
Published: over 3 years ago

10.3389/fphar.2020.00983

The Delivery of α1-Antitrypsin Therapy Through Transepidermal Route: Worthwhile to Explore
Cited by: 8
Author(s): Srinu Tumpara, Beatriz Martı́nez-Delgado, Gema Gómez-Mariano, Bin Liu, David S. DeLuca, Elena Korenbaum, Danny Jonigk, Frank K. Jugert, Florian M. Wurm, Tobias Welte, Sabina Janciauskiene
Software Mentions: 1
Published: over 4 years ago

10.1080/19768354.2018.1512522

Comparison of long noncoding RNA between muscles and adipose tissues in <i>Hanwoo</i> beef cattle
Cited by: 9
Author(s): Jae-Ho Choi, Donghyun Shin, Hyun-Jeong Lee, Jae-Don Oh
Software Mentions: 1
Published: almost 6 years ago

10.3389/fphar.2021.629513

Xiao-Yin-Fang Therapy Alleviates Psoriasis-like Skin Inflammation Through Suppressing γδT17 Cell Polarization
Cited by: 6
Author(s): Xilin Zhang, Xiaorui Li, Youdong Chen, Bingjie Li, Chunyuan Guo, Peng Xu, Zengyang Yu, Yangfeng Ding, Yujun Shi, Jun Gu
Software Mentions: 1
Published: over 3 years ago

10.1242/jcs.258685

Activation of IRE1, PERK and salt-inducible kinases leads to Sec body formation in <i>Drosophila</i> S2 cells
Cited by: 5
Author(s): Chujun Zhang, Wessel van Leeuwen, Marloes Blotenburg, Angelica Aguilera-Gomez, Sem Brussee, Rianne Grond, Harm H. Kampinga, Cathérine Rabouille
Software Mentions: 1
Published: about 3 years ago

10.1186/1758-2946-4-19

Applied and implied semantics in crystallographic publishing
Cited by: 3
Author(s): Brian McMahon
Software Mentions: 1
Published: about 12 years ago

10.5334/jcr.203

Metastasis of Breast Cancer Promoted by Circadian Rhythm Disruption due to Light/Dark Shift and its Prevention by Dietary Quercetin in Mice
Cited by: 8
Author(s): Minoru Numata, Akane Hirano, Yukika Yamamoto, Michiko Yasuda, Nobuhiko Miura, Kazutoshi Sayama, Masa‐Aki Shibata, Tomohiro Asai, Naoto Oku, Noriyuki Miyoshi, Kayoko Shimoi
Software Mentions: 1
Published: almost 4 years ago

10.1007/s10875-020-00932-1

Identification of Critical Transcriptomic Signaling Pathways in Patients with H Syndrome and Rosai-Dorfman Disease
Cited by: 2
Author(s): Samuel Lara-Reyna, James A. Poulter, Elton J. R. Vasconcelos, Mark Kačar, Michael F. McDermott, Reuben Tooze, Rainer Döffinger, Sinisa Savic
Software Mentions: 1
Published: almost 4 years ago

10.3389/fimmu.2020.483296

ProTECT—Prediction of T-Cell Epitopes for Cancer Therapy
Cited by: 12
Author(s): Rao Av, Ada A. Madejska, Jacob Pfeil, Benedict Paten, Sofie R. Salama, David Haussler
Software Mentions: 1
Published: about 4 years ago

10.3389/fimmu.2021.672123

Gene Expression Profiling of Lymph Node Sub-Capsular Sinus Macrophages in Cancer
Cited by: 1
Author(s): Pellin Danilo, Natalie Claudio, Zihan Guo, Tahereh Ziglari, Ferdinando Pucci
Software Mentions: 1
Published: over 3 years ago

10.1038/s41388-020-1161-3

Polycomb-mediated repression of EphrinA5 promotes growth and invasion of glioblastoma
Cited by: 15
Author(s): Barbara Ricci, Thomas O Millner, Nicola Pomella, Xinyu Zhang, Loredana Guglielmi, Sara Badodi, Dario Ceric, Carolina Gemma, Erica Cognolato, Ying Zhang, Sebastian Brandner, Michael R. Barnes, Silvia Marino
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2021.669889

Immunologic Profiling of the Atlantic Salmon Gill by Single Nuclei Transcriptomics
Cited by: 13
Author(s): Alexander C. West, Yasutaka Mizoro, Shona H. Wood, Louise Ince, Marianne Iversen, Even H. Jørgensen, Torfinn Nome, Simen Rød Sandve, Samuel Martín, A. S. I. Loudon, David G. Hazlerigg
Software Mentions: 1
Published: over 3 years ago

10.3389/fimmu.2019.02081

Fasciola hepatica Infection in Cattle: Analyzing Responses of Peripheral Blood Mononuclear Cells (PBMC) Using a Transcriptomics Approach
Cited by: 24
Author(s): Garcia-Campos Andres, Carolina N. Correia, Amalia Naranjo‐Lucena, Laura Garza‐Cuartero, Gabriella Farries, John A. Browne, David E. MacHugh, Grace Mulcahy
Software Mentions: 1
Published: about 5 years ago

10.3390/jcm8030297

Comparative Gene Expression Profiles in Parathyroid Adenoma and Normal Parathyroid Tissue
Cited by: 14
Author(s): Young Jun Chai, Han‐Jung Chae, Kwangsoo Kim, Heonyi Lee, Sukwoo Choi, Kyu Eun Lee, Sang Wan Kim
Software Mentions: 1
Published: over 5 years ago

10.5713/ajas.19.0874

Effect of JAK-STAT pathway in regulation of fatty liver hemorrhagic syndrome in chickens
Cited by: 9
Author(s): Yuanjun Zhu, Huirong Mao, Gang Peng, Qiaoying Zeng, Qing Wei, Jiming Ruan, Jingjing Huang
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41388-020-1349-6

Deoxycholic acid modulates the progression of gallbladder cancer through N6-methyladenosine-dependent microRNA maturation
Cited by: 44
Author(s): Rongfu Lin, Ming Zhan, Linhua Yang, Hui Wang, Hui Shen, Shuai Huang, Xince Huang, Sunwang Xu, Zi-Jie Zhang, Weijian Li, Qiang Liu, Yongsheng Shi, Wei Chen, Jianxiu Yu, Jian Wang
Software Mentions: 1
Published: over 4 years ago

10.3390/jcm10061238

Clinical Evidence behind Stereotactic Radiotherapy for the Treatment of Ventricular Tachycardia (STAR)—A Comprehensive Review
Cited by: 14
Author(s): Marcin Miszczyk, Tomasz Jadczyk, Krzysztof S. Gołba, Wojciech Wojakowski, Krystian Wita, Jacek Bednarek, Sławomir Blamek
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2164-7-286

Novel subtractive transcription-based amplification of mRNA (STAR) method and its application in search of rare and differentially expressed genes in AD brains
Cited by: 9
Author(s): Qing Yan Liu, Roy Sooknanan, Lawrence T. Malek, Maria Ribecco-Lutkiewicz, Joy X Lei, Hui Shen, Bolesław Lach, P. Roy Walker, Joel Martin, Marianna Sikorska
Software Mentions: 1
Published: about 18 years ago

10.1038/s41388-020-01507-5

Genetic alterations of SUGP1 mimic mutant-SF3B1 splice pattern in lung adenocarcinoma and other cancers
Cited by: 11
Author(s): Samar Alsafadi, Stéphane Dayot, Malcy Tarin, Alexandre Houy, Dorine Bellanger, Michele Cornella, Michel Wassef, Joshua J. Waterfall, Erik Lehnert, Sergio Román-Román, Marc‐Henri Stern, Tatiana Popova
Software Mentions: 1
Published: about 4 years ago

10.3389/fimmu.2020.01204

Ischemia Reperfusion Injury Triggers CXCL13 Release and B-Cell Recruitment After Allogenic Kidney Transplantation
Cited by: 17
Author(s): Kirill Kreimann, Mi-Sun Jang, Song Rong, Robert Greite, Sibylle von Vietinghoff, Roland Schmitt, Jan Hinrich Bräsen, Lena Schiffer, Jessica Gerstenberg, Vijith Vijayan, Oliver Dittrich–Breiholz, Li Wang, Christian M. Karsten, Wilfried Gwinner, Hermann Haller, Stephan Immenschuh, Faikah Gueler
Software Mentions: 1
Published: over 4 years ago

10.1186/s12864-017-4335-9

Biclustering of transcriptome sequencing data reveals human tissue-specific circular RNAs
Cited by: 8
Author(s): Yuchen Liu, Yu-Jung Chiu, Jiànróng Lǐ, Chuan-Hu Sun, Chun-Chi Liu, Hsien-Da Huang
Software Mentions: 1
Published: almost 7 years ago

10.3389/fimmu.2018.02303

Silencing the CSF-1 Axis Using Nanoparticle Encapsulated siRNA Mitigates Viral and Autoimmune Myocarditis
Cited by: 25
Author(s): Ingmar Soeren Meyer, Carl Christoph Goetzke, Meike Kespohl, Martina Sauter, Arnd Heuser, Volker Eckstein, Hans‐Peter Vornlocher, Daniel G. Anderson, Jan Haas, Benjamin Meder, Hugo A. Katus, Karin Klingel, Antje Beling, Florian Leuschner
Software Mentions: 1
Published: about 6 years ago

10.3389/fimmu.2020.01039

Aire Gene Influences the Length of the 3′ UTR of mRNAs in Medullary Thymic Epithelial Cells
Cited by: 1
Author(s): Érika Arantes de Oliveira, Amanda Freire Assis, César A. Speck-Hernández, Max Jordan Duarte, Geraldo A. S. Passos
Software Mentions: 1
Published: over 4 years ago

10.1038/s41388-021-01847-w

Transglutaminase 2 promotes tumorigenicity of colon cancer cells by inactivation of the tumor suppressor p53
Cited by: 12
Author(s): Patrizia Malkomes, Ilaria Lunger, Elsie Oppermann, Khalil Abou-El-Ardat, Thomas Oellerich, Stefan Günther, Can Canbulat, Sabrina Bothur, Frank Schnütgen, Weijia Yu, Susanne Wingert, Nadine Haetscher, Claudia Catapano, Marina S. Dietz, Mike Heilemann, Hans‐Michael Kvasnicka, Katharina Holzer, Hubert Serve, Wolf O. Bechstein, Michael A. Rieger
Software Mentions: 1
Published: over 3 years ago

10.1530/JOE-13-0346

Oxidative stress and adrenocortical insufficiency
Cited by: 41
Author(s): Rathi Prasad, Julia Kowalczyk, Eirini Meimaridou, Helen L Storr, Louise A. Metherell
Software Mentions: 1
Published: over 10 years ago

10.1186/s12864-017-4241-1

ExUTR: a novel pipeline for large-scale prediction of 3′-UTR sequences from NGS data
Cited by: 31
Author(s): Zixia Huang, Emma C. Teeling
Software Mentions: 1
Published: about 7 years ago

10.1093/jxb/erx044

Three FT and multiple CEN and BFT genes regulate maturity, flowering, and vegetative phenology in kiwifruit
Cited by: 31
Author(s): Charlotte Voogd, Lara Brian, Tianchi Wang, Andrew C. Allan, Erika Varkonyi‐Gasic
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2020.609337

Tumor Microenvironment Status Predicts the Efficacy of Postoperative Chemotherapy or Radiochemotherapy in Resected Gastric Cancer
Cited by: 8
Author(s): Ran Duan, Xiaoqin Li, Dongqiang Zeng, Xiaofeng Chen, Bo Shen, Dongqin Zhu, Lei Zhu, Yangyang Yu, Deqiang Wang
Software Mentions: 1
Published: almost 4 years ago

10.1093/jxb/erz558

Mapping a double flower phenotype-associated gene DcAP2L in Dianthus chinensis
Cited by: 15
Author(s): Qijian Wang, Xiaoni Zhang, Shengnan Lin, Shaozong Yang, Xiuli Yan, Mohammed Bendahmane, Manzhu Bao, Xiaopeng Fu
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12864-020-07018-7

Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle
Cited by: 14
Author(s): Jigme Dorji, Christy J. Vander Jagt, Josie B. Garner, L. C. Marett, Brett Mason, Coralie M. Reich, Ruidong Xiang, Emily L. Clark, Benjamin G. Cocks, Amanda J. Chamberlain, Iona M. MacLeod, Hans D. Daetwyler
Software Mentions: 1
Published: about 4 years ago

10.3389/fimmu.2021.727941

A Novel Bifunctional Fusion Protein, Vunakizumab-IL22, for Protection Against Pulmonary Immune Injury Caused by Influenza Virus
Cited by: 6
Author(s): Ling Han, Chenchen Shi, Xian Zeng, Lifeng Cen, Xiaobin Mei, Jiajun Fan, Dianwen Ju, Haiyan Zhu
Software Mentions: 1
Published: over 3 years ago

10.1093/jxb/eraa315

Arabidopsis exoribonuclease USB1 interacts with the PPR-domain protein SOAR1 to negatively regulate abscisic acid signaling
Cited by: 11
Author(s): Ma Yu, Shang Zhang, Chao Bi, Chao Mei, Shang-Chuan Jiang, Xiaofang Wang, Zhi John Lu, David Zhang
Software Mentions: 1
Published: about 4 years ago

10.1038/oncsis.2016.63

GPR133 (ADGRD1), an adhesion G-protein-coupled receptor, is necessary for glioblastoma growth
Cited by: 46
Author(s): N. Sumru Bayın, Joshua D. Frenster, Jason M. Kane, Jordan Rubenstein, Aram S. Modrek, Rabaa Baitalmal, Igor Dolgalev, Katie Rudzenski, Lia Scarabottolo, D. Crespi, Loredana Redaelli, Matija Snuderl, John G. Golfinos, Werner Doyle, Donato Pacione, Erik C. Parker, A S, Adriana Heguy, Douglas J. MacNeil, Nadim Shohdy, David Zagzag, Dimitris G. Placantonakis
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms20215484

Whole-Genome and Transposed Duplication Contributes to the Expansion and Diversification of TLC Genes in Maize
Cited by: 12
Author(s): Weina Si, Tianlu Hang, Mingyue Guo, Zhe Chen, Qizhi Liang, Longjiang Gu, Tao Ding
Software Mentions: 1
Published: about 5 years ago

10.1111/obr.12961

Core outcome set for behavioural weight management interventions for adults with overweight and obesity: Standardised reporting of lifestyle weight management interventions to aid evaluation (STAR‐LITE)
Cited by: 25
Author(s): Ruth M. Mackenzie, Louisa Ells, Sharon Anne Simpson, Jennifer Logue
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1003591

Chikungunya Virus 3′ Untranslated Region: Adaptation to Mosquitoes and a Population Bottleneck as Major Evolutionary Forces
Cited by: 78
Author(s): Rubing Chen, Eryu Wang, Konstantin A. Tsetsarkin, Scott C. Weaver
Software Mentions: 1
Published: about 11 years ago

10.3389/fimmu.2021.687579

Transcriptomic Analysis of Ovine Hepatic Lymph Node Following Fasciola hepatica Infection – Inhibition of NK Cell and IgE-Mediated Signaling
Cited by: 8
Author(s): Amalia Naranjo‐Lucena, Carolina N. Correia, Verónica Molina-Hernández, Á. Martínez-Moreno, John A. Browne, J. Pérez, David E. MacHugh, Grace Mulcahy
Software Mentions: 1
Published: over 3 years ago

10.1177/1759091415593066

Combined HDAC1 and HDAC2 Depletion Promotes Retinal Ganglion Cell Survival After Injury Through Reduction of p53 Target Gene Expression
Cited by: 42
Author(s): Frédéric Lebrun-Julien, Ueli Suter
Software Mentions: 1
Published: over 9 years ago

Projects: cran: STAR

Papers Mentioning STAR 5,759