10.1371/journal.pone.0200417

Downregulation of splicing regulator RBFOX1 compromises visual depth perception
Cited by: 12
Author(s): Lin Gu, Dean Bok, Fei Yu, Joseph Caprioli, Natik Piri
Software Mentions: 1
Published: almost 8 years ago

10.1098/rsbl.2021.0342

Horizontal transfer and subsequent explosive expansion of a DNA transposon in sea kraits ( <i>Laticauda</i> )
Cited by: 10
Author(s): James D. Galbraith, Alastair J. Ludington, Kate L. Sanders, Alexander Suh, David L. Adelson
Software Mentions: 1
Published: almost 5 years ago

10.3389/fimmu.2020.584310

Lung Secretoglobin Scgb1a1 Influences Alveolar Macrophage-Mediated Inflammation and Immunity
Cited by: 23
Author(s): Min Xu, Wei Yang, Xuanchuan Wang, D. K. Nayak
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.ppat.1006846

A new cell culture model to genetically dissect the complete human papillomavirus life cycle
Cited by: 40
Author(s): Malgorzata Bienkowska-Haba, Wioleta Łuszczek, Julia E. Myers, Timothy R. Keiffer, Stephen DiGiuseppe, Paula Polk, Jason M. Bodily, Rona S. Scott, Martin Sapp
Software Mentions: 1
Published: over 8 years ago

10.1128/mBio.01362-19

Pseudomonas aeruginosa Regulatory Protein AnvM Controls Pathogenicity in Anaerobic Environments and Impacts Host Defense
Cited by: 13
Author(s): Yingchao Zhang, Chunkui Zhou, Qinqin Pu, Qun Wu, Shirui Tan, Xiaolong Shao, Weitong Zhang, Yingpeng Xie, Rongpeng Li, Xue‐Jie Yu, Rui Wang, Liang Zhang, Min Wu, Xin Deng
Software Mentions: 1
Published: almost 7 years ago

10.7717/peerj.8690

Comparative transcriptomic analyses of chlorogenic acid and luteolosides biosynthesis pathways at different flowering stages of diploid and tetraploid <i>Lonicera japonica</i>
Cited by: 7
Author(s): Hongli Wang, Yanqun Li, Sibo Wang, Dexin Kong, Sunil Kumar Sahu, Mei Bai, Haoyuan Li, Linzhou Li, Yan Xu, Hongping Liang, Sunil Kumar Sahu
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2019.00269

Requirement for Cyclic AMP/Protein Kinase A-Dependent Canonical NFκB Signaling in the Adjuvant Action of Cholera Toxin and Its Non-toxic Derivative mmCT
Cited by: 9
Author(s): Manuela Terrinoni, Jan Holmgren, Michael Lebens, Maximilian Larena
Software Mentions: 1
Published: over 7 years ago

10.3389/fimmu.2020.629726

Proteinase-Mediated Macrophage Signaling in Psoriatic Arthritis
Cited by: 8
Author(s): Fatima Abji, Mozhgan Rasti, Alejandro Gómez‐Aristizábal, Carla Muytjens, Mahmoud Saifeddine, Koichiro Mihara, Majid Motahhari, Rajiv Gandhi, Sowmya Viswanathan, Morley D. Hollenberg, Κατερίνα Οικονομοπούλου, Vinod Chandran
Software Mentions: 1
Published: over 5 years ago

10.1038/s41419-020-02754-w

The longevity-associated variant of BPIFB4 improves a CXCR4-mediated striatum–microglia crosstalk preventing disease progression in a mouse model of Huntington’s disease
Cited by: 14
Author(s): Alba Di Pardo, Elena Ciaglia, Monica Cattaneo, Anna Maciąg, Francesco Montella, Valentina Lopardo, Anna Ferrario, Francesco Villa, Michele Madonna, Enrico Amico, Albino Carrizzo, Antonio L. Damato, Giuseppe Pepe, Federico Marracino, Alberto Auricchio, Carmine Vecchione, Vittorio Maglione, Annibale Alessandro Puca
Software Mentions: 1
Published: almost 6 years ago

10.1002/pld3.174

In Arabidopsis hybrids and Hybrid Mimics, up‐regulation of cell wall biogenesis is associated with the increased plant size
Cited by: 7
Author(s): Li Wang, Li Min Wu, Ian K. Greaves, Elizabeth S. Dennis, W. James Peacock
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2020.575103

Evolutionarily Selected Overexpression of the Cytokine BAFF Enhances Mucosal Immune Response Against P. falciparum
Cited by: 3
Author(s): Valeria Lodde, Matteo Floris, Isabel Beerman, Rachel Munk, Rajan Guha, Maristella Steri, Valeria Orrù, Kotb Abdelmohsen, Peter D. Crompton, Myriam Gorospe, Maria Laura Idda, Francesco Cucca
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12864-016-3414-7

Genome-wide standing variation facilitates long-term response to bidirectional selection for antibody response in chickens
Cited by: 20
Author(s): Mette Lillie, Zheya Sheng, Christa F. Honaker, Ben Dorshorst, C. M. Ashwell, P. B. Siegel, Örjan Carlborg
Software Mentions: 1
Published: over 9 years ago

10.1116/1.4985184

Happy 70th birthday to Buddy Ratner!!
Cited by: 1
Author(s): Allan S. Hoffman
Software Mentions: 1
Published: about 9 years ago

10.1186/s12859-020-03869-9

TruNeo: an integrated pipeline improves personalized true tumor neoantigen identification
Cited by: 12
Author(s): Yuchen Tang, Yu Wang, Hua Wang, Miao Li, Linmin Peng, Guochao Wei, Yixing Zhang, Li Jin, Zhibo Gao
Software Mentions: 1
Published: over 5 years ago

10.1111/tpj.14661

<scp>d</scp>‐Lactic acid secreted by<i>Chlorella fusca</i>primes pattern‐triggered immunity against<i>Pseudomonas syringae</i>in Arabidopsis
Cited by: 14
Author(s): Sang-Moo Lee, Seon‐Kyu Kim, Nakyeong Lee, Chi‐Yong Ahn, Choong‐Min Ryu
Software Mentions: 1
Published: over 6 years ago

10.1007/s00520-020-05539-1

Digital health for optimal supportive care in oncology: benefits, limits, and future perspectives
Cited by: 123
Author(s): Matti Aapro, Paolo Bossi, Arvind Dasari, Lesley Fallowfield, Pere Gascón, Melissa A. Geller, Karin Jordan, Joseph W. Kim, Karina Martin, S. Porzig
Software Mentions: 1
Published: about 6 years ago

10.1093/bioinformatics/btaa779

Shark: fishing relevant reads in an RNA-Seq sample
Cited by: 7
Author(s): Luca Denti, Yuri Pirola, Marco Previtali, Tamara Ceccato, Gianluca Della Vedova, Raffaella Rizzi, Paola Bonizzoni
Software Mentions: 1
Published: almost 6 years ago

10.1093/bioinformatics/btab017

Hardware acceleration of genomics data analysis: challenges and opportunities
Cited by: 6
Author(s): Tony Robinson, Jim Harkin, Priyank Shukla
Software Mentions: 1
Published: about 5 years ago

10.1093/bioinformatics/btx668

Evaluation of tools for long read RNA-seq splice-aware alignment
Cited by: 55
Author(s): Krešimir Križanović, Amina Echchiki, Julien Roux, Mile Šikić
Software Mentions: 1
Published: over 8 years ago

10.18632/aging.101836

Alternative polyadenylation dependent function of splicing factor SRSF3 contributes to cellular senescence
Cited by: 32
Author(s): Ting Shen, Huan Li, Yifang Song, Li Li, Jinzhong Lin, Gang Wei, Ting Ni
Software Mentions: 1
Published: over 7 years ago

10.1093/bioinformatics/btw076

<i>SplAdder</i>: identification, quantification and testing of alternative splicing events from RNA-Seq data
Cited by: 117
Author(s): André Kahles, Cheng Soon Ong, Yi Zhong, Gunnar Rätsch
Software Mentions: 1
Published: over 10 years ago

10.7717/peerj.8009

Genomic analyses provide insights into breed-of-origin effects from purebreds on three-way crossbred pigs
Cited by: 3
Author(s): Yu Lin, Qianzi Tang, Yan Li, Mengnan He, Long Jin, Jideng Ma, Xun Wang, Keren Long, Zhiqing Huang, Xuewei Li, Yiren Gu, Mingzhou Li
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2019.01844

Maintenance of Functional CD57+ Cytolytic CD4+ T Cells in HIV+ Elite Controllers
Cited by: 23
Author(s): Chansavath Phetsouphanh, Daniel Aldridge, Emanuele Marchi, C. Mee Ling Munier, Jodi Meyerowitz, Lyle Murray, C.V. van Vuuren, Dominique Goedhals, Sarah Fidler, Anthony D. Kelleher, Paul Klenerman, John Frater
Software Mentions: 1
Published: almost 7 years ago

10.1093/bioinformatics/btz033

Improved indel detection in DNA and RNA via realignment with ABRA2
Cited by: 45
Author(s): Lisle E. Mose, Charles M. Perou, Joel S. Parker
Software Mentions: 1
Published: over 7 years ago

10.1016/j.stemcr.2020.01.008

Autophagy Reprograms Alveolar Progenitor Cell Metabolism in Response to Lung Injury
Cited by: 28
Author(s): Xue Li, Junping Wu, Xin Sun, Qi Wu, Yue Li, Kuan Li, Qiuyang Zhang, Yu Liu, E. Dale Abel, Huaiyong Chen
Software Mentions: 1
Published: over 6 years ago

10.1007/s10439-012-0530-7

Head Impact Exposure in Youth Football
Cited by: 200
Author(s): R.W. Daniel, Steven Rowson, Stefan M. Duma
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.ppat.1007850

The protective effect of inflammatory monocytes during systemic C. albicans infection is dependent on collaboration between C-type lectin-like receptors
Cited by: 33
Author(s): Aiysha Thompson, Luke C. Davies, Chia‐Te Liao, Diogo M da Fonseca, J. S. Griffiths, Robert Andrews, Aled Jones, Mathew Clement, Gordon D. Brown, Ian R. Humphreys, Philip Russel Taylor, Selinda J. Orr
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-020-6643-8

A large-scale comparative study of isoform expressions measured on four platforms
Cited by: 6
Author(s): Wei Zhang, Raphael Petegrosso, Ju Young Chang, Jiao Sun, Jeongsik Yong, Jeremy Chien, Rui Kuang
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.8461

Loss of Schlafen3 influences the expression levels of Schlafen family members in ileum, thymus, and spleen tissue
Cited by: 5
Author(s): Emilie E. Vomhof-DeKrey, Josey Umthun, Marc D. Basson
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0203543

Plausibility of the zebrafish embryos/larvae as an alternative animal model for autism: A comparison study of transcriptome changes
Cited by: 15
Author(s): Sang‐Woo Lee, Hang-Suk Chun, Jieon Lee, Han-Jin Park, Ki-Tae Kim, Cheol-Hee Kim, Seokjoo Yoon, Woo‐Keun Kim
Software Mentions: 1
Published: almost 8 years ago

10.3390/bioengineering7020062

An Uncertainty Modeling Framework for Intracardiac Electrogram Analysis
Cited by: 1
Author(s): Amirhossein Koneshloo, Dongping Du, Yuncheng Du
Software Mentions: 1
Published: about 6 years ago

10.3390/plants9020280

The Analysis of the Editing Defects in the dyw2 Mutant Provides New Clues for the Prediction of RNA Targets of Arabidopsis E+-Class PPR Proteins
Cited by: 18
Author(s): Bastien Malbert, Matthias Burger, Mauricio Lopez‐Obando, Kévin Baudry, Alexandra Launay‐Avon, Barbara Härtel, Daniil Verbitskiy, Anja Jörg, Richard Berthomé, Claire Lurin, Mizuki Takenaka, Étienne Delannoy
Software Mentions: 1
Published: over 6 years ago

10.1107/S2059798319016577

Amyloid structure determination in <i>RELION</i>-3.1
Cited by: 136
Author(s): S.H.W. Scheres
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0141298

Evidence of Extensive Alternative Splicing in Post Mortem Human Brain HTT Transcription by mRNA Sequencing
Cited by: 17
Author(s): Adam Labadorf, Richard H. Myers
Software Mentions: 1
Published: over 10 years ago

10.3390/plants9020152

Exploring the Link between Photosystem II Assembly and Translation of the Chloroplast psbA mRNA
Cited by: 23
Author(s): Prakitchai Chotewutmontri, Rosalind Williams‐Carrier, Alice Barkan
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2018.00899

Complement-Opsonized HIV-1 Alters Cross Talk Between Dendritic Cells and Natural Killer (NK) Cells to Inhibit NK Killing and to Upregulate PD-1, CXCR3, and CCR4 on T Cells
Cited by: 12
Author(s): Rada Ellegård, Mohammad Khalid, Cecilia Svanberg, Hanna Holgersson, Ylva Thoren, Mirja Karolina Wittgren, Jorma Hinkula, Sofia Nyström, Esaki M. Shankar, Marie Larsson
Software Mentions: 1
Published: about 8 years ago

10.3389/fimmu.2019.00455

The Concerted Action of E2-2 and HEB Is Critical for Early Lymphoid Specification
Cited by: 13
Author(s): Thibault Bouderlique, Lucía Peña-Pérez, Shabnam Kharazi, Miriam Hils, Xiaoze Li, Aleksandra Krstić, Annick De Paepe, Christian Schachtrup, Charlotte Gustafsson, Dan Holmberg, Christian Schachtrup, Robert Månsson
Software Mentions: 1
Published: over 7 years ago

10.3762/bjnano.7.198

From iron coordination compounds to metal oxide nanoparticles
Cited by: 13
Author(s): Mihail Iacob, Carmen Racleş, Codrin Tugui, George Stiubianu, Adrian Bele, Liviu Sãcãrescu, Daniel Ţîmpu, Maria Cazacu
Software Mentions: 1
Published: over 9 years ago

10.1038/s41419-020-2536-7

The HMGB1-RAGE axis modulates the growth of autophagy-deficient hepatic tumors
Cited by: 14
Author(s): Bilon Khambu, Honghai Hong, Sheng Liu, Gang Liu, Xiaoyun Chen, Zheng Dong, Jun Wan, Xiao Ming Yin
Software Mentions: 1
Published: about 6 years ago

10.1186/s12863-019-0765-5

Meta-analysis of GWA studies provides new insights on the genetic architecture of skin pigmentation in recently admixed populations
Cited by: 27
Author(s): Frida Lona-Durazo, Natalia Hernandez‐Pacheco, Shaohua Fan, Tongwu Zhang, Jiyeon Choi, Michael A. Kovacs, Stacie K. Loftus, Phuong Le, Melissa Edwards, César Fortes-Lima, Celeste Eng, Scott Huntsman, Donglei Hu, Enrique Javier Gómez-Cabezas, Lilia C. Marín-Padrón, Jonas Grauholm, Ole Mors, Esteban G. Burchard, Heather L. Norton, William J. Pavan, Kevin M. Brown, Sarah A. Tishkoff, María Pino-Yanes, Sandra Beleza, Beatriz Marcheco-Teruel, Esteban J. Parra
Software Mentions: 1
Published: almost 7 years ago

10.1007/s00395-020-00828-6

Functional investigation of the coronary artery disease gene SVEP1
Cited by: 20
Author(s): Michael J. Winkler, Philipp Müller, Amin M. Sharifi, Jana Wobst, Hanna Winter, Michal Mokrý, Lijiang Ma, Sander W. van der Laan, Shichao Pang, Benedikt Miritsch, Julia Hinterdobler, Julia Werner, Barbara Stiller, Ulrich Güldener, Tom R. Webb, Folkert W. Asselbergs, Johan Björkegren, Lars Maegdefessel, Heribert Schunkert, Hendrik B. Sager, Thorsten Kessler
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms20194722

Overexpression of BpCUC2 Influences Leaf Shape and Internode Development in Betula pendula
Cited by: 9
Author(s): Chaoyi Liu, Huirong Xu, Rui Han, Shuo Wang, Guifeng Liu, Chen Su, Jiying Chen, Xiuyan Bian, Jing Jiang
Software Mentions: 1
Published: almost 7 years ago

10.7717/peerj.3548

Early-branching euteleost relationships: areas of congruence between concatenation and coalescent model inferences
Cited by: 9
Author(s): Matthew A. Campbell, Michael E. Alfaro, Max Belasco, J. Andrés López
Software Mentions: 1
Published: almost 9 years ago

10.3389/fimmu.2021.629391

Small Intestinal Tuft Cell Activity Associates With Energy Metabolism in Diet-Induced Obesity
Cited by: 6
Author(s): Pankaj Arora, Daniel S. Andersen, Janne Marie Moll, Niels Banhos Danneskiold‐Samsøe, Liqin Xu, Biaofeng Zhou, Georgios Kladis, Philipp Rausch, Christopher T. Workman, Karsten Kristiansen, Susanne Brix
Software Mentions: 1
Published: about 5 years ago

10.1186/1471-2296-10-20

Stemming the Tide of Antibiotic Resistance (STAR): A protocol for a trial of a complex intervention addressing the 'why' and 'how' of appropriate antibiotic prescribing in general practice
Cited by: 27
Author(s): Sharon Anne Simpson, Christopher Collett Butler, Kerenza Hood, David Cohen, Frank David John Dunstan, Meirion Rhys Evans, Stephen Rollnick, Linda Moore, Monika Hare, Marie Bekkers, J. D. Evans
Software Mentions: 1
Published: over 17 years ago

10.1186/1471-2296-11-34

Enhancing the quality of antibiotic prescribing in Primary Care: Qualitative evaluation of a blended learning intervention
Cited by: 42
Author(s): Marie-Jet Bekkers, Sharon Anne Simpson, Frank David John Dunstan, Kerenza Hood, Monika Hare, J. D. Evans, Christopher Collett Butler
Software Mentions: 1
Published: about 16 years ago

10.3389/fimmu.2019.03033

Single Eye mRNA-Seq Reveals Normalisation of the Retinal Microglial Transcriptome Following Acute Inflammation
Cited by: 14
Author(s): Oliver H. Bell, David A Copland, Amy Ward, Lindsay B. Nicholson, Clemens Lange, Colin J Chu, Andrew D. Dick
Software Mentions: 1
Published: over 6 years ago

10.1007/s12035-019-01822-3

Endothelial Cell-Specific Transcriptome Reveals Signature of Chronic Stress Related to Worse Outcome After Mild Transient Brain Ischemia in Mice
Cited by: 4
Author(s): Stephanie Wegner, Ria Uhlemann, Valérie Boujon, Burcu Ersoy, Matthias Endres, Golo Kronenberg, Karen Gertz
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pgen.1008744

Coordinate genomic association of transcription factors controlled by an imported quorum sensing peptide in Cryptococcus neoformans
Cited by: 9
Author(s): Diana Summers, Daniela S. Perry, Beiduo Rao, Hiten D. Madhani
Software Mentions: 1
Published: almost 6 years ago

10.1007/s10439-019-02330-0

Development of the STAR Evaluation System for Assessing Bicycle Helmet Protective Performance
Cited by: 40
Author(s): Megan L. Bland, Craig McNally, David S. Zuby, Becky C. Mueller, Steven Rowson
Software Mentions: 1
Published: almost 7 years ago

10.1007/s10439-015-1278-7

Hockey STAR: A Methodology for Assessing the Biomechanical Performance of Hockey Helmets
Cited by: 78
Author(s): Bethany Rowson, Steven Rowson, Stefan M. Duma
Software Mentions: 1
Published: over 11 years ago

10.1155/2019/4957806

Equine Adipose-Derived Mesenchymal Stromal Cells Release Extracellular Vesicles Enclosing Different Subsets of Small RNAs
Cited by: 22
Author(s): Stefano Capomaccio, Katia Cappelli, Cinzia Bazzucchi, Mauro Coletti, Rodolfo Gialletti, Franco Moriconi, Fabrizio Passamonti, Marco Pepe, Stefano Petrini, Samanta Mecocci, Maurizio Silvestrelli, Luisa Pascucci
Software Mentions: 1
Published: over 7 years ago

10.7717/peerj.5759

Sequence variant analysis of RNA sequences in severe equine asthma
Cited by: 8
Author(s): Laurence Tessier, Olivier Côté, Dorothee Bienzle
Software Mentions: 1
Published: over 7 years ago

10.1093/molbev/msaa250

Gene-Level, but Not Chromosome-Wide, Divergence between a Very Young House Fly Proto-Y Chromosome and Its Homologous Proto-X Chromosome
Cited by: 11
Author(s): Jae Hak Son, Richard P. Meisel
Software Mentions: 1
Published: almost 6 years ago

10.7150/thno.35045

Loss of histone macroH2A1 in hepatocellular carcinoma cells promotes paracrine-mediated chemoresistance and CD4⁺CD25⁺FoxP3⁺ regulatory T cells activation
Cited by: 25
Author(s): Oriana Lo Re, Tommaso Mazza, Sebastiano Giallongo, Paola Sanna, Francesca Rappa, Tu Vinh Luong, Giovanni Li Volti, Adela Drovakova, Tania Roskams, Matthias Van Haele, Emmanuel Tsochatzis, Manlio Vinciguerra
Software Mentions: 1
Published: over 6 years ago

10.1007/s10439-012-0660-y

The Virginia Tech Response
Cited by: 22
Author(s): Steven Rowson, Stefan M. Duma
Software Mentions: 1
Published: almost 14 years ago

10.1007/s10439-019-02345-7

Development and Multi-Scale Validation of a Finite Element Football Helmet Model
Cited by: 24
Author(s): William Decker, Alexander M. Baker, Xin Ye, Philip J. Brown, Joel D. Stitzel, F. Scott Gayzik
Software Mentions: 1
Published: almost 7 years ago

10.1128/mBio.00053-20

New Host-Directed Therapeutics for the Treatment of Clostridioides difficile Infection
Cited by: 7
Author(s): Jourdan A. Andersson, Alex G. Peniche, Cristi L. Galindo, Prapaporn Boonma, Jian Sha, Ruth Ann Luna, Tor Savidge, Ashok K. Chopra, Sara M. Dann
Software Mentions: 1
Published: about 6 years ago

10.7150/thno.45614

Single-cell RNA-Seq reveals the transcriptional landscape and heterogeneity of skin macrophages in Vsir^-/- murine psoriasis
Cited by: 26
Author(s): Chenxin Qie, Jingwei Jiang, Wanmei Liu, Xiaofan Hu, Wenting Chen, Xiaoxue Xie, Jun Li
Software Mentions: 1
Published: over 6 years ago

10.1186/s13075-018-1631-y

Methods for high-dimensional analysis of cells dissociated from cryopreserved synovial tissue
Cited by: 82
Author(s): Laura T. Donlin, Deepak A. Rao, Kevin Wei, Kamil Slowikowski, Mandy J. McGeachy, Jason D. Turner, Nida Meednu, Fumitaka Mizoguchi, María Gutiérrez‐Arcelus, David Lieb, Joshua Keegan, Kaylin Muskat, Joshua Hillman, Cristina Rozo, Edd Ricker, Thomas Eisenhaure, Shuqiang Li, Edward P. Browne, Adam Chicoine, Danielle Sutherby, Akiko Noma, Accelerating Medicines Partnership, Chad Nusbaum, Stephen Kelly, Alessandra B. Pernis, Lionel B. Ivashkiv, Susan M. Goodman, William H. Robinson, Paul J. Utz, James A. Lederer, Ellen M. Gravallese, Brendan F. Boyce, Nir Hacohen, Costantino Pitzalis, Peter K. Gregersen, Gary S. Firestein, Soumya Raychaudhuri, Larry W. Moreland, V. Michael Holers, Vivian P. Bykerk, Andrew Filer, David L. Boyle, Michael B. Brenner, Jennifer H. Anolik
Software Mentions: 1
Published: almost 8 years ago

10.1186/s41927-018-0029-4

Identifying the unmet information and support needs of women with autoimmune rheumatic diseases during pregnancy planning, pregnancy and early parenting: mixed-methods study
Cited by: 29
Author(s): Rhiannon Phillips, Bethan Pell, Aimee Grant, D. Q. Bowen, Julia Sanders, Ann M. Taylor, Adrian Edwards, Ernest Choy, Denitza Williams
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pgen.1006453

Investigating Conservation of the Cell-Cycle-Regulated Transcriptional Program in the Fungal Pathogen, Cryptococcus neoformans
Cited by: 38
Author(s): Christina M. Kelliher, Adam R. Leman, Crystal S Sierra, Steven B. Haase
Software Mentions: 1
Published: over 9 years ago

10.3389/fimmu.2019.02889

HSV-2 Cellular Programming Enables Productive HIV Infection in Dendritic Cells
Cited by: 7
Author(s): Elisa Crisci, Cecilia Svanberg, Rada Ellegård, Mohammad Khalid, Julia Hellblom, Kazuki Okuyama, Paramita Bhattacharya, Sofia Nyström, Esaki Muthu Shankar, Kristina Eriksson, Marie Larsson
Software Mentions: 1
Published: over 6 years ago

10.3390/pathogens9080620

Bovine Polyomavirus 2 is a Probable Cause of Non-Suppurative Encephalitis in Cattle
Cited by: 7
Author(s): Melanie M. Hierweger, Michel C. Koch, Torsten Seuberlich
Software Mentions: 1
Published: almost 6 years ago

10.3390/pathogens10040405

Characterization of Ocular Surface Microbial Profiles Revealed Discrepancies between Conjunctival and Corneal Microbiota
Cited by: 18
Author(s): Anna Matysiak, Michał Kabza, Justyna A. Karolak, Marcelina M. Jaworska, Małgorzata Rydzanicz, Rafał Płoski, Jacek P. Szaflik, Marzena Gajęcka
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms20184387

Differential Regulation of Anthocyanins in Green and Purple Turnips Revealed by Combined De Novo Transcriptome and Metabolome Analysis
Cited by: 62
Author(s): Hongmei Zhuang, Qian Lei, Huifang Liu, Hongwei Han, Qiang Wang, Zhonghua Tang, Yanming Ma, Hao Wang
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12862-015-0403-4

Molecular phylogeny of the subfamily Stevardiinae Gill, 1858 (Characiformes: Characidae): classification and the evolution of reproductive traits
Cited by: 43
Author(s): Andréa T. Thomaz, Dahiana Arcila, Guillermo Ortı́, Luiz Roberto Malabarba
Software Mentions: 1
Published: almost 11 years ago

10.3389/fimmu.2021.723196

HCV Cure With Direct-Acting Antivirals Improves Liver and Immunological Markers in HIV/HCV-Coinfected Patients
Cited by: 11
Author(s): Óscar Brochado-Kith, Isidoro Martı́nez, Juan Berenguer, Juan González‐García, Sergio Salgüero, Daniel Sepúlveda‐Crespo, Cristina Díez, Víctor Hontañón, Luis Ibáñez‐Samaniego, Leire Pérez‐Latorre, Amanda Fernández‐Rodríguez, María Ángeles Jiménez-Sousa, Salvador Resino
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12862-018-1161-x

Unexpected conservation of the RNA splicing apparatus in the highly streamlined genome of Galdieria sulphuraria
Cited by: 13
Author(s): Huan Qiu, Alessandro W. Rossoni, Andreas P.M. Weber, Hwan Su Yoon, Debashish Bhattacharya
Software Mentions: 1
Published: over 8 years ago

10.3389/fimmu.2021.638469

Subversion of Host Innate Immunity by Rickettsia australis via a Modified Autophagic Response in Macrophages
Cited by: 9
Author(s): Jeremy Bechelli, Claire Smalley Rumfield, David H. Walker, Steven G. Widen, Kamil Khanipov, Rong Fang
Software Mentions: 1
Published: about 5 years ago

10.1007/s10439-020-02703-w

Ranking and Rating Bicycle Helmet Safety Performance in Oblique Impacts Using Eight Different Brain Injury Models
Cited by: 58
Author(s): Madelen Fahlstedt, Fady F. Abayazid, Matthew B. Panzer, Antonia Trotta, Wei Zhao, Mazdak Ghajari, Michael D. Gilchrist, Songbai Ji, Svein Kleiven, Xiaogai Li, Aisling Ní Annaidh, Peter Halldin
Software Mentions: 1
Published: over 5 years ago

10.1186/s13104-017-2985-y

Consideration of non-canonical splice sites improves gene prediction on the Arabidopsis thaliana Niederzenz-1 genome sequence
Cited by: 23
Author(s): Boas Pucker, Daniela Holtgräwe, Bernd Weißhaar
Software Mentions: 1
Published: over 8 years ago

10.1186/s12889-018-6120-3

The effectiveness and cost-effectiveness of community-based lay distribution of HIV self-tests in increasing uptake of HIV testing among adults in rural Malawi and rural and peri-urban Zambia: protocol for STAR (self-testing for Africa) cluster randomized evaluations
Cited by: 24
Author(s): Melissa Neuman, Pitchaya Indravudh, Richard Chilongosi, Marc d’Elbée, Nicola Desmond, Katherine Fielding, Bernadette Hensen, Cheryl Johnson, Phillip Mkandawire, Alwyn Mwinga, Mutinta Nalubamba, Gertrude Ncube, Lot Nyirenda, Rose Nyrienda, Eveline Otte im Kampe, Miriam Taegtmeyer, Fern Terris‐Prestholt, Helen A. Weiss, Karin Hatzold, Helen Ayles, Elizabeth L. Corbett
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.ppat.1009582

Characterization of ALTO-encoding circular RNAs expressed by Merkel cell polyomavirus and trichodysplasia spinulosa polyomavirus
Cited by: 14
Author(s): Rong Yang, Eunice E. Lee, Jiwoong Kim, Joon Hwan Choi, Elysha Kolitz, Yating Chen, Clair Crewe, Nicholas J. H. Salisbury, Philipp E. Scherer, Clay J. Cockerell, Taylor R. Smith, Rosemary Son, Louisa Verlinden, Denise A. Galloway, Christopher B. Buck, Mariet C.W. Feltkamp, Christopher S. Sullivan, Richard C. Wang
Software Mentions: 1
Published: about 5 years ago

10.1007/s12035-019-01681-y

Age and Sex Influence the Hippocampal Response and Recovery Following Sepsis
Cited by: 29
Author(s): Jolie Barter, Ashok Kumar, Julie A. Stortz, McKenzie K. Hollen, Dina C. Nacionales, Philip A. Efron, Lyle L. Moldawer, Thomas C. Foster
Software Mentions: 1
Published: about 7 years ago

10.1186/s12862-016-0769-y

Expanding anchored hybrid enrichment to resolve both deep and shallow relationships within the spider tree of life
Cited by: 141
Author(s): Chris A. Hamilton, Alan R. Lemmon, Emily Moriarty Lemmon, Jason E. Bond
Software Mentions: 1
Published: over 9 years ago

10.3389/fnint.2021.652218

Editorial: Sensory Processing Across the Lifespan: A 25-Year Initiative to Understand Neurophysiology, Behaviors, and Treatment Effectiveness for Sensory Processing
Cited by: 4
Author(s): Lucy Miller, Elysa J. Marco, Robyn Chu, Stephen Camarata
Software Mentions: 1
Published: about 5 years ago

10.1186/s12889-020-08614-8

Mechanisms of change and participant outcomes in a Recovery Education Centre for individuals transitioning from homelessness: a qualitative evaluation
Cited by: 10
Author(s): Nadine Reid, Bushra Khan, Sophie Soklaridis, Nicole Kozloff, Rebecca Brown, Vicky Stergiopoulos
Software Mentions: 1
Published: about 6 years ago

10.1186/s12862-018-1120-6

Population size may shape the accumulation of functional mutations following domestication
Cited by: 13
Author(s): Jianhai Chen, Peihong Ni, Xinyun Li, Jianlin Han, Ivan Jakovlić, Chengjun Zhang, Shuhong Zhao
Software Mentions: 1
Published: over 8 years ago

10.1186/s13071-020-04085-3

Species and sex-specific chemosensory gene expression in Anopheles coluzzii and An. quadriannulatus antennae
Cited by: 6
Author(s): Giridhar Athrey, Zachary R. Popkin-Hall, Luciano V. Cosme, Willem Takken, Michel A. Slotman
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-018-24881-3

Diversity time-period and diversity-time-area relationships exemplified by the human microbiome
Cited by: 9
Author(s): Zhanshan Sam
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0175393

Identification of human short introns
Cited by: 13
Author(s): Emmanuel L. Abebrese, Sadia Ali, Zachary R. Arnold, Victoria M. Andrews, Katharine Fairlie Armstrong, Lindsay H. Burns, Hannah R. Crowder, R. Thomas Day, Daniel G. Hsu, Katherine Jarrell, Grace Lee, Yi Luo, Daphine Mugayo, Zain Raza, Kyle Friend
Software Mentions: 1
Published: about 9 years ago

10.1186/s12888-019-2094-7

Recovery-focused mental health care planning and co-ordination in acute inpatient mental health settings: a cross national comparative mixed methods study
Cited by: 42
Author(s): Michael Coffey, Ben Hannigan, Sally Barlow, Martin Cartwright, Rachel Cohen, Alison Faulkner, Aled Jones, Alan Simpson
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2019.02305

Microbial Metabolic Capacity for Intestinal Folate Production and Modulation of Host Folate Receptors
Cited by: 81
Author(s): Melinda A. Engevik, Christina N. Morra, Daniel Röth, Kristen A. Engevik, Jennifer K. Spinler, Sridevi Devaraj, Sue E. Crawford, Mary K. Estes, Markus Kalkum, James Versalovic
Software Mentions: 1
Published: over 6 years ago

10.1093/molbev/msw079

Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies
Cited by: 574
Author(s): Erfan Sayyari, Siavash Mirarab
Software Mentions: 1
Published: about 10 years ago

10.1186/s12888-016-0858-x

Recovery-focused care planning and coordination in England and Wales: a cross-national mixed methods comparative case study
Cited by: 59
Author(s): Alan Simpson, Ben Hannigan, Michael Coffey, Sally Barlow, Rachel Cohen, Aled Jones, Jitka Všetečková, Alison Faulkner, Ashleigh Thornton, Martin Cartwright
Software Mentions: 1
Published: about 10 years ago

10.1186/1471-244X-12-25

Long acting risperidone in Australian patients with chronic schizophrenia: 24-month data from the e-STAR database
Cited by: 13
Author(s): Tim Lambert, B. T. Emmerson, Harry Hustig, Sophie Resseler, An Jacobs, Belinda Butcher
Software Mentions: 1
Published: over 14 years ago

10.3389/fmicb.2020.568891

Editorial: MALDI-TOF MS Application for Susceptibility Testing of Microorganisms
Cited by: 4
Author(s): Karsten Becker, Sören Schubert
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-018-26050-y

MicroRNAs as potential therapeutics to enhance chemosensitivity in advanced prostate cancer
Cited by: 33
Author(s): Hui-Ming Lin, Iva Nikolić, Jessica Yang, Lesley Castillo, Niantao Deng, Chia Ling Chan, Nicole Yeung, Eoin Dodson, Benjamin Elsworth, Calan Spielman, Brian Y. Lee, Zoe Boyer, Kaylene J. Simpson, Roger J. Daly, Lisa G. Horvath, Alexander Swarbrick
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2019.01650

The Tsetse Fly Displays an Attenuated Immune Response to Its Secondary Symbiont, Sodalis glossinidius
Cited by: 15
Author(s): Katrien Trappeniers, Irina Matetovici, Jan Van Den Abbeele, Linda De Vooght
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-244X-8-95

The effect of antipsychotic medication on sexual function and serum prolactin levels in community-treated schizophrenic patients: results from the Schizophrenia Trial of Aripiprazole (STAR) study (NCT00237913)
Cited by: 78
Author(s): Linda Hanssens, Gilbert L’Italien, Jean‐Yves Loze, Ronald N. Marcus, Miranda Pans, Wendy Kerselaers
Software Mentions: 1
Published: over 17 years ago

10.1186/s12861-019-0196-6

Deletion of Tet proteins results in quantitative disparities during ESC differentiation partially attributable to alterations in gene expression
Cited by: 7
Author(s): Michael Reimer, Kirthi Pulakanti, Linzheng Shi, Alex M. Abel, Mingyu Liang, Subramaniam Malarkannan, Sridhar Rao
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.stemcr.2021.06.013

Hypersensitivity response has negligible impact on Hematopoietic Stem Cells
Cited by: 1
Author(s): Nir Bujanover, Roshina Thapa, Oron Goldstein, Leonid Olender, Omri Sharabi, Michael D. Milsom, Roi Gazit
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms21041489

Metformin Alleviates Left Ventricular Diastolic Dysfunction in a Rat Myocardial Ischemia Reperfusion Injury Model
Cited by: 9
Author(s): Woori Jo, Kyung-Ku Kang, Sehyun Chae, Woo‐Chan Son
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.611080

Cold Adaptation Mechanisms of a Snow Alga Chlamydomonas nivalis During Temperature Fluctuations
Cited by: 7
Author(s): Zhao Peng, Gai Liu, Kaiyao Huang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.712564

Overexpression of mqsR in Xylella fastidiosa Leads to a Priming Effect of Cells to Copper Stress Tolerance
Cited by: 3
Author(s): Isis Gabriela Barbosa Carvalho, Marcus V. Merfa, Natália Sousa Teixeira-Silva, Paula Maria Moreira Martins, Marco Aurélio Takita, Alessandra Alves de Souza
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12861-021-00245-5

Msx1 haploinsufficiency modifies the Pax9-deficient cardiovascular phenotype
Cited by: 6
Author(s): Ramada R. Khasawneh, Ralf Kist, Rachel Queen, Rafiqul Hussain, Jonathan Coxhead, Jürgen Schneider, Timothy J. Mohun, Stéphane Zaffran, Heiko Peters, Helen M. Phillips, Simon D. Bamforth
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-018-23551-8

ARE-mediated decay controls gene expression and cellular metabolism upon oxygen variations
Cited by: 10
Author(s): Bérengère de Toeuf, Romuald Soin, Abdelkarim Nazih, M Dragojević, Dukas Jurėnas, Nadège Delacourt, Long Vo Ngoc, Abel García-Pino, Véronique Kruys, Cyril Gueydan
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.02168

Global Analysis of Cell Wall Genes Revealed Putative Virulence Factors in the Dermatophyte Trichophyton rubrum
Cited by: 15
Author(s): Maíra Pompeu Martins, Larissa Gomes Silva, Antônio Rossi, Pablo Rodrigo Sanches, Larissa Daniela Ribeiro de Souza, Nilce Maria Martinez-Rossi
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2021.613697

Evaluation of Host Immune Response in Diabetic Foot Infection Tissues Using an RNA Sequencing-Based Approach
Cited by: 3
Author(s): Fatemah Sadeghpour Heravi, Martha Zakrzewski, Hamidreza Aboulkheyr Estarabadi, Karen Vickery, Honghua Hu
Software Mentions: 1
Published: over 5 years ago