cran: STAR | Projects | Ecosyste.ms: Papers

10.3389/fimmu.2016.00228

Mucosal Regulatory T Cells and T Helper 17 Cells in HIV-Associated Immune Activation
Cited by: 34
Author(s): Pushpa Pandiyan, Souheil Antoine Younes, Susan Pereira Ribeiro, Aarthi Talla, David McDonald, Natarajan Bhaskaran, Alan D. Levine, Aaron Weinberg, Rafick Pierre Sékaly
Software Mentions: 2
Published: about 10 years ago

10.3389/fimmu.2017.01342

Early Events of the Reaction Elicited by CSF-470 Melanoma Vaccine Plus Adjuvants: An In Vitro Analysis of Immune Recruitment and Cytokine Release
Cited by: 3
Author(s): María Betina Pampena, María Marcela Barrio, Estefanía Paula Juliá, Paula A. Blanco, Erika M. Von Euw, José Mordoh, Estrella Mariel Levy
Software Mentions: 2
Published: over 8 years ago

10.3389/fimmu.2018.01943

Xenogeneic Graft-Versus-Host Disease in Humanized NSG and NSG-HLA-A2/HHD Mice
Cited by: 53
Author(s): Grégory Ehx, Joan Somja, Hans-Jörg Warnatz, Caroline Ritacco, Muriel Hannon, Loïc Delens, Gilles Fransolet, Philippe Delvenne, Joséphine Muller, Yves Béguin, Hans Lehrach, Ludovic Belle, Stéphanie Humblet-Baron, Frédéric Baron
Software Mentions: 2
Published: almost 8 years ago

10.1016/j.dib.2018.03.079

RNA-seq data of invasive ductal carcinoma and adjacent normal tissues from a Korean patient with breast cancer
Cited by: 4
Author(s): Ji Hyung Hong, Yoon Ho Ko, Keunsoo Kang
Software Mentions: 2
Published: about 8 years ago

10.1172/jci.insight.139043

Epigenetic silencing of CD4 expression in nonpathogenic SIV infection in African green monkeys
Cited by: 8
Author(s): Joseph C. Mudd, Stephen Lai, Sanjana Shah, Andrew R. Rahmberg, Jacob K. Flynn, Carly E. Starke, Molly Perkins, Amy Ransier, Samuel Darko, Daniel C. Douek, Vanessa M. Hirsch, Mark J. Cameron, Jason M. Brenchley
Software Mentions: 2
Published: almost 6 years ago

10.1172/jci.insight.139628

PFKFB3-mediated glycolysis rescues myopathic outcomes in the ischemic limb
Cited by: 20
Author(s): Terence E. Ryan, Cameron A. Schmidt, Michael D. Tarpey, Adam J. Amorese, Dean T. Yamaguchi, Emma J. Goldberg, Melissa Mae R. Inigo, Reema Karnekar, Allison R. O’Rourke, James M. Ervasti, Patricia Brophy, Thomas D. Green, P. Darrell Neufer, Kelsey H. Fisher‐Wellman, Espen E. Spangenburg, Joseph M. McClung
Software Mentions: 2
Published: almost 6 years ago

10.3389/fendo.2021.671724

Attenuated Induction of the Unfolded Protein Response in Adult Human Primary Astrocytes in Response to Recurrent Low Glucose
Cited by: 3
Author(s): Paul G. Weightman Potter, Sam Washer, Aaron R. Jeffries, Janet E. Holley, N. J. Gutowski, Emma Dempster, Craig Beall
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-017-07922-1

Specific calpain inhibition protects kidney against inflammaging
Cited by: 11
Author(s): Guillaume Hanouna, Michel Laurent, Sophie Vandermeersch, Joëlle Perez, Sandrine Placier, Jean‐Philippe Haymann, Fabien Campagne, Julien Moroch, Aurélien Bataille, Laurent Baud, Emmanuel Letavernier
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-017-09515-4

RNA-Seq reveals MicroRNA expression signature and genetic polymorphism associated with growth and muscle quality traits in rainbow trout
Cited by: 13
Author(s): Bam Paneru, Rafet Al-Tobasei, Brett Kenney, Timothy D. Leeds, Mohamed Salem
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-017-10692-5

Whole Transcriptome Analysis of Notochord-Derived Cells during Embryonic Formation of the Nucleus Pulposus
Cited by: 47
Author(s): Sun H. Peck, Kendra K. McKee, John W. Tobias, Neil R. Malhotra, Brian D. Harfe, Lachlan J. Smith
Software Mentions: 2
Published: almost 9 years ago

10.3389/fcell.2021.665409

Prolonged Environmental Enrichment Promotes Developmental Myelination
Cited by: 12
Author(s): Evan Z. Goldstein, Vera Pertsovskaya, Thomas A. Forbes, Jeffrey L. Dupree, Vittorio Gallo
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-017-12557-3

Glutaminase 2 expression is associated with regional heterogeneity of 5-aminolevulinic acid fluorescence in glioblastoma
Cited by: 19
Author(s): Sojin Kim, Ja Eun Kim, Yong Hwy Kim, Tae-Young Hwang, Sung Kwon Kim, Wen Xu, Jong Yeon Shin, Jong‐Il Kim, Hyung Kook Choi, Hee Chan Kim, Hye Rim Cho, Anna Choi, Tamrin Chowdhury, Young‐Joon Seo, Yun Sik Dho, Jin Wook Kim, Dong Gyu Kim, Shin Young Park, Hyeonjin Kim, Seung Hong Choi, Sunghyouk Park, Se‐Hoon Lee, Shin Young Park
Software Mentions: 2
Published: almost 9 years ago

10.3389/fcell.2021.644947

An Early Diagnostic Clue for COL18A1- and LAMA1-Associated Diseases: High Myopia With Alopecia Areata in the Cranial Midline
Cited by: 1
Author(s): Panfeng Wang, Xiaoyun Jia, Xueshan Xiao, Shiqiang Li, Yuxi Long, Mengchu Liu, Yongyu Li, Jun Li, Yan Xu, Qingjiong Zhang
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-017-13171-z

The neonicotinoid insecticide Clothianidin adversely affects immune signaling in a human cell line
Cited by: 22
Author(s): Gennaro Di Prisco, Marco Iannaccone, Flora Ianniello, Renata Ferrara, Emilio Caprio, Francesco Pennacchio, Rosanna Capparelli
Software Mentions: 2
Published: over 8 years ago

10.3389/fcell.2020.00647

Are Epithelial Ovarian Cancers of the Mesenchymal Subtype Actually Intraperitoneal Metastases to the Ovary?
Cited by: 11
Author(s): Ye Hu, Barbie Taylor‐Harding, Yael Raz, Marcela Haro, María Sol Recouvreux, Enes Taylan, Jenny Lester, Joshua Millstein, Ann E. Walts, Beth Y. Karlan, Sandra Oršulić
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-017-14892-x

A Comparison of mRNA Sequencing with Random Primed and 3′-Directed Libraries
Cited by: 48
Author(s): Yuguang Xiong, Magali Soumillon, Jie Wu, Jens Hansen, Bin Hu, J. G. Coen van Hasselt, Gomathi Jayaraman, Ryan G. Lim, Mehdi Bouhaddou, Loren Ornelas, Jim Bochicchio, Lindsay Lenaeus, Jennifer Stocksdale, Jaehee Shim, Emilda Gomez, Dhruv Sareen, Clive N. Svendsen, Leslie M. Thompson, Milind Mahajan, Ravi Iyengar, Eric A. Sobie, Evren U. Azeloglu, Marc R. Birtwistle
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-017-14275-2

A transcriptomic study of myogenic differentiation under the overexpression of PPARγ by RNA-Seq
Cited by: 8
Author(s): Kan He, Guoying Wu, Wen‐Xing Li, Daogang Guan, Wen Lv, Mengting Gong, Shoudong Ye, Aiping Lu
Software Mentions: 2
Published: over 8 years ago

10.3389/fcell.2021.735684

Molecular Features of Polycystic Ovary Syndrome Revealed by Transcriptome Analysis of Oocytes and Cumulus Cells
Cited by: 18
Author(s): Jie Li, Hạixia Chen, Mo Gou, Chenglei Tian, Huasong Wang, Xiaomin Song, David L. Keefe, Xue Bai, Lin Liu
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-017-16343-z

Whole Transcriptome Sequencing Analyses Reveal Molecular Markers of Blood Pressure Response to Thiazide Diuretics
Cited by: 5
Author(s): Ana Caroline Costa Sá, Amy Webb, Yan Gong, Caitrin W. McDonough, Somnath Datta, Taimour Langaee, Stephen T. Turner, Amber L. Beitelshees, Arlene B. Chapman, Eric Boerwinkle, John G. Gums, Steven E. Scherer, Rhonda M. Cooper‐DeHoff, Wolfgang Sadée, Julie A. Johnson
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pgen.1007058

Gli3 is a negative regulator of Tas1r3-expressing taste cells
Cited by: 25
Author(s): Yumei Qin, Sunil K. Sukumaran, Masafumi Jyotaki, Kevin Redding, Peihua Jiang, Robert F. Margolskee
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-017-16664-z

Sex differences in peripheral not central immune responses to pain-inducing injury
Cited by: 85
Author(s): Douglas M. Lopes, Natalia Małek, Michelle E. Edye, Sara Buskbjerg Jager, Sheridan McMurray, Stephen B. McMahon, Franziska Denk
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-017-16829-w

Age-dependent increase of oxidative stress regulates microRNA-29 family preserving cardiac health
Cited by: 47
Author(s): Johanna Heid, Chiara Cencioni, Roberto Ripa, Mario Baumgart, Sandra Atlante, Giuseppina Milano, Alessandro Scopece, Carsten Kuenne, Stefan Guenther, Valerio Azzimato, Antonella Farsetti, Giacomo Rossi, Thomas Braun, Giulio Pompilio, Fabio Martelli, Andreas M. Zeiher, Alessandro Cellerino, Carlo Gaetano, Francesco Spallotta
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-017-17067-w

Experimental Zika Virus Inoculation in a New World Monkey Model Reproduces Key Features of the Human Infection
Cited by: 53
Author(s): Charles Y. Chiu, Carolyn Martin, Jérôme Bouquet, Tony Li, Shigeo Yagi, Manasi Tamhankar, Vida Hodara, Laura M. Parodi, Sneha Somasekar, Guixia Yu, Luis D. Giavedoni, Suzette D. Tardif, Jean L. Patterson
Software Mentions: 2
Published: over 8 years ago

10.3389/fcell.2021.617281

Insights Into the Role of CircRNAs: Biogenesis, Characterization, Functional, and Clinical Impact in Human Malignancies
Cited by: 45
Author(s): Sabah Nisar, Ajaz A. Bhat, Mayank Singh, Thasni Karedath, Arshi Rizwan, Sheema Hashem, Puneet Bagga, Ravinder Reddy, Farrukh Jamal, Shahab Uddin, Gyan Chand, Davide Bedognetti, Wael El-Rifai, Michael Frenneaux, Muzafar A. Macha, Ikhlak Ahmed, Mohammad Haris
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pgen.1007412

Nuclear m6A reader YTHDC1 regulates alternative polyadenylation and splicing during mouse oocyte development
Cited by: 349
Author(s): Seth D. Kasowitz, Jun Ma, Stephen J. Anderson, N. Adrian Leu, Yang Xu, Brian D. Gregory, Richard M. Schultz, P. Jeremy Wang
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-19392-0

Pancreatic gene expression during recovery after pancreatitis reveals unique transcriptome profiles
Cited by: 12
Author(s): Kristy Boggs, Ting Wang, Abrahim I. Orabi, Amitava Mukherjee, John F. Eisses, Tao Sun, Li Wen, Tanveer A. Javed, Farzad Esni, Wei Chen, Sohail Z. Husain
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-20476-0

Unravelling genetic variation underlying de novo-synthesis of bovine milk fatty acids
Cited by: 34
Author(s): Tim Martin Knutsen, Harald Olsen, Valeria Tafintseva, Mathias Tiedemann Svendsen, Achim Köhler, Matthew Kent, Sigbjørn Lien
Software Mentions: 2
Published: over 8 years ago

10.18632/oncotarget.15237

Metabolic heterogeneity signature of primary treatment-naïve prostate cancer
Cited by: 16
Author(s): Dong Lin, Susan Ettinger, Sifeng Qu, Hui Xue, Noushin Nabavi, Si‐Sun Choi, Robert H. Bell, Fan Mo, Anne Haegert, Peter W. Gout, Neil Fleshner, Martin Gleave, Michael Pollak, Colin C. Collins, Yuzhuo Wang
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-018-21211-5

Parental micronutrient deficiency distorts liver DNA methylation and expression of lipid genes associated with a fatty-liver-like phenotype in offspring
Cited by: 40
Author(s): Kaja H. Skjærven, Lars Martin Jakt, Jorge Manuel de Oliveira Fernandes, John Arne Dahl, Anne‐Catrin Adam, Johanna Klughammer, Christoph Bock, Marit Espe
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-21663-9

Genomics of a pediatric ovarian fibrosarcoma. Association with the DICER1 syndrome
Cited by: 19
Author(s): Jorge Meléndez-Zajgla, Gabriela Mercado, Javier Gaytán-Cervantes, Amada Torres, Nayeli Belem Gabiño, Martha Zapata-Tarrés, Luis Enrique Juárez-Villegas, Pablo Lezama, Vilma Maldonado, Karen Ruiz-Monroy, Elvia Mendoza-Caamal
Software Mentions: 2
Published: over 8 years ago

10.1186/s13023-021-01679-7

Proteomics analysis of a human brain sample from a mucolipidosis type IV patient reveals pathophysiological pathways
Cited by: 10
Author(s): Ayelet Vardi, Amir Pri-Or, Noa Wigoda, Yulia Grishchuk, Anthony H. Futerman
Software Mentions: 2
Published: over 5 years ago

10.18632/oncotarget.18117

Notch signaling regulates metabolic heterogeneity in glioblastoma stem cells
Cited by: 55
Author(s): N. Sumru Bayın, Joshua D. Frenster, Rajeev Sen, Sheng Si, Aram S. Modrek, Nataliya Galifianakis, Igor Dolgalev, Valerio Ortenzi, Irineu Illa-Bochaca, Anadjeet Khahera, Jonathan Serrano, Luis Chiriboga, David Zagzag, John G. Golfinos, Werner Doyle, Aristotelis Tsirigos, Adriana Heguy, Mitchell Chesler, Mary Helen Barcellos‐Hoff, Matija Snuderl, Dimitris G. Placantonakis
Software Mentions: 2
Published: about 9 years ago

10.18632/oncotarget.20260

The conjugated antimetabolite 5-FdU-ECyd and its cellular and molecular effects on platinum-sensitive vs. -resistant ovarian cancer cells in vitro
Cited by: 5
Author(s): Sarah Schott, Pauline Wimberger, Barbara Klink, Konrad Grützmann, Julian Puppe, Ulrike Sophie Wauer, Daniel Martin Klotz, Evelin Schröck, Jan Dominik Kuhlmann
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-018-23226-4

Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion
Cited by: 116
Author(s): Shanrong Zhao, Ying Zhang, Ramya Gamini, Baohong Zhang, David von Schack
Software Mentions: 2
Published: over 8 years ago

10.1186/s12967-017-1350-1

Transforming growth factor beta (TGF-β) in adolescent chronic fatigue syndrome
Cited by: 14
Author(s): Vegard Bruun Wyller, Chinh Bkrong Nguyen, Judith Krey Ludviksen, Tom Eirik Mollnes
Software Mentions: 2
Published: over 8 years ago

10.3389/fcell.2021.677981

RNA Network Interactions During Differentiation of Human Trophoblasts
Cited by: 5
Author(s): Tianjiao Chu, Jean-François Mouillet, Zhishen Cao, Oren Barak, Yi‐Bing Ouyang, Yoel Sadovsky
Software Mentions: 2
Published: about 5 years ago

10.18632/oncotarget.19283

Aberrantly activated Cox-2 and Wnt signaling interact to maintain cancer stem cells in glioblastoma
Cited by: 32
Author(s): Megan Wu, Jennifer Guan, Chris Li, Simon J Gunter, Labeeba Nusrat, S. C. Ng, Karan Dhand, Cindi M. Morshead, Albert Kim, Sunit Das
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-018-24935-6

Sauchinone controls hepatic cholesterol homeostasis by the negative regulation of PCSK9 transcriptional network
Cited by: 25
Author(s): Hee‐Sung Chae, Byoung Hoon You, Dong Yeop Kim, Hankyu Lee, Hyuk Wan Ko, Hyun Jeong Ko, Young Hee Choi, Sun Shim Choi, Young‐Won Chin
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-25205-1

Experimental Zika Virus Infection in the Pregnant Common Marmoset Induces Spontaneous Fetal Loss and Neurodevelopmental Abnormalities
Cited by: 58
Author(s): Maxim D. Seferovic, Claudia Sánchez San Martín, Suzette D. Tardif, Julienne N. Rutherford, Eumenia Castro, Tony Li, Vida Hodara, Laura M. Parodi, Luis D. Giavedoni, Donna Layne-Colon, Manasi Tamhankar, Shigeo Yagi, Calla Martyn, Kevin Reyes, Melissa Suter, Kjersti M. Aagaard, Charles Y. Chiu, Jean L. Patterson
Software Mentions: 2
Published: about 8 years ago

10.3389/fcell.2020.00264

Canonical WNT/β-Catenin Signaling Activated by WNT9b and RSPO2 Cooperation Regulates Facial Morphogenesis in Mice
Cited by: 12
Author(s): Yong-Ri Jin, Xiuzhen Han, Katsuhiko Nishimori, Dan Ben-Avraham, Youn Jeong Oh, Jae Kun Shim, Jong‐Hwan Yoon
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pgen.1008036

LINE-2 transposable elements are a source of functional human microRNAs and target sites
Cited by: 42
Author(s): Rebecca Petri, Per Ludvik Brattås, Yogita Sharma, Marie E. Jönsson, Karolina Pircs, Johan Bengzon, Johan Jakobsson
Software Mentions: 2
Published: over 7 years ago

10.18632/oncotarget.22159

Regulatory T cells characterized by low Id3 expression are highly suppressive and accumulate during chronic infection
Cited by: 7
Author(s): Katharina S. Rauch, Miriam Hils, Alexandra J. Menner, Mikael Sigvardsson, Susana Minguet, Peter Aichele, Christian Schachtrup, Christian Schachtrup
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-020-70412-4

Transcriptional mutagenesis dramatically alters genome-wide p53 transactivation landscape
Cited by: 2
Author(s): Shuo Liang, Monika Ezerskyte, Jingwen Wang, Vicent Pelechano, Kristian Dreij
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-70616-8

Early pregnancy-induced transcripts in peripheral blood immune cells in Bos indicus heifers
Cited by: 18
Author(s): Cecília Constantino Rocha, Sónia Cristina da Silva Andrade, Gustavo Augusto Schmidt de Melo, Igor Garcia Motta, Luiz Lehmann Coutinho, Ángela María Gonella-Diaza, Mário Binelli, Guilherme Pugliesi
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-70730-7

Collagen VIα2 chain deficiency causes trabecular bone loss by potentially promoting osteoclast differentiation through enhanced TNFα signaling
Cited by: 11
Author(s): Hai Thanh Pham, Vardit Kram, Qurratul-Ain Dar, Taishi Komori, Youngmi Ji, Payam Mohassel, Jachinta Rooney, Li Li, Tina M. Kilts, C. Bönnemann, Shireen R. Lamandé, Marian F. Young
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-70040-y

Mycoplasma hyopneumoniae J elicits an antioxidant response and decreases the expression of ciliary genes in infected swine epithelial cells
Cited by: 6
Author(s): Scheila Gabriele Mucha, Mariana Galvão Ferrarini, Carol Moraga, Alex Di Génova, Laurent Guyon, Florence Tardy, Sophie Rome, Marie‐France Sagot, Arnaldo Zaha
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-71904-z

Mating and blood-feeding induce transcriptome changes in the spermathecae of the yellow fever mosquito Aedes aegypti
Cited by: 18
Author(s): Carolina Camargo, Yasir H. Ahmed-Braimah, I. Alexandra Amaro, Laura C. Harrington, Mariana F. Wolfner, Frank W. Avila
Software Mentions: 2
Published: almost 6 years ago

10.18632/oncotarget.22867

Genomic landscape of colitis-associated cancer indicates the impact of chronic inflammation and its stratification by mutations in the Wnt signaling
Cited by: 32
Author(s): Masashi Fujita, Nagahide Matsubara, Ikuo Matsuda, Kazuhiro Maejima, Ayako Oosawa, Tomoki Yamano, Akihiro Fujimoto, Mayuko Furuta, Kaoru Nakano, Aya Oku‐Sasaki, Hiroko Tanaka, Yuichi Shiraishi, Raúl Nicolás Mateos, Kenta Nakai, Satoru Miyano, Naohiro Tomita, Seiichi Hirota, Hiroki Ikeuchi, Hidewaki Nakagawa
Software Mentions: 2
Published: over 8 years ago

10.3389/fcell.2019.00368

Extracellular Vesicles From Hepatocytes Are Therapeutic for Toxin-Mediated Fibrosis and Gene Expression in the Liver
Cited by: 29
Author(s): Xinlei Li, Ruju Chen, Sherri Kemper, David R. Brigstock
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-020-73000-8

Changes in transcriptomic response to salinity stress induce the brackish water adaptation in a freshwater snail
Cited by: 5
Author(s): Takumi Yokomizo, Yuma Takahashi
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-73166-1

High-fat diet and estrogen impacts the colon and its transcriptome in a sex-dependent manner
Cited by: 25
Author(s): Linnea Hases, Amena Archer, Rajitha Indukuri, Madeleine Birgersson, Christina Savva, Marion Korach-André, Cecilia Williams
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-73046-8

Rat pancreatectomy combined with isoprenaline or uninephrectomy as models of diabetic cardiomyopathy or nephropathy
Cited by: 2
Author(s): Louise Thisted, Morten Østergaard, Annemarie A. Pedersen, Philip J. Pedersen, Ross T Lindsay, Andrew Murray, Lisbeth Nielsen Fink, T. Pedersen, Thomas Secher, Thea T. Johansen, Sebastian T. Thrane, Torben Skarsfeldt, Jacob Jelsing, Morten B. Thomsen, Nora E. Zois
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-73081-5

Top-ranked expressed gene transcripts of human protein-coding genes investigated with GTEx dataset
Cited by: 19
Author(s): Kuo-Feng Tung, Chao‐Yu Pan, Chao-Hsin Chen, Wen-chang Lin
Software Mentions: 2
Published: almost 6 years ago

10.3389/fcell.2021.629430

DAND5 Inactivation Enhances Cardiac Differentiation in Mouse Embryonic Stem Cells
Cited by: 1
Author(s): José Manuel Inácio, João von Gilsa Lopes, Ana Mafalda Silva, Fernando Cristo, Sara Marques, Matthias E. Futschik, José António Belo
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-74989-8

Differences in maternal gene expression in Cesarean section delivery compared with vaginal delivery
Cited by: 4
Author(s): Prachi Kothiyal, Keriann Schulkers, Xinyue Liu, Sahel Hazrati, Thierry Vilboux, Luis M. Gómez, Kathi Huddleston, Wendy S. W. Wong, John E. Niederhuber, Thomas P. Conrads, G. Larry Maxwell, Suchitra K. Hourigan
Software Mentions: 2
Published: over 5 years ago

10.3389/fcell.2021.635307

RAMP2-AS1 Regulates Endothelial Homeostasis and Aging
Cited by: 9
Author(s): Chih Hung Lai, Aleysha T. Chen, Alan R. Burns, Kiran Sriram, Yingjun Luo, Xiaofang Tang, Sergio Branciamore, Denis O’Meally, Szu Ling Chang, Po Hsun Huang, John Y.‐J. Shyy, Shu Chien, Russell C. Rockne, Zhen Bouman Chen
Software Mentions: 2
Published: over 5 years ago

10.3389/fcell.2021.711792

Deficiency of Intellectual Disability-Related Gene Brpf1 Attenuated Hippocampal Excitatory Synaptic Transmission and Impaired Spatial Learning and Memory Ability
Cited by: 5
Author(s): Weiwei Xian, Jingli Cao, Xinlu Yuan, Guoxiang Wang, Qiuyan Jin, Hang Zhang, Guomin Zhou, Linya You
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-75243-x

A large deletion on CFA28 omitting ACSL5 gene is associated with intestinal lipid malabsorption in the Australian Kelpie dog breed
Cited by: 4
Author(s): Mitchell O’Brien, Niek Beijerink, Mandy Sansom, Sarah Thornton, Tracy Chew, Claire M. Wade
Software Mentions: 2
Published: over 5 years ago

10.3389/fcell.2020.608112

Dynamic Polarization of Rab11a Modulates Crb2a Localization and Impacts Signaling to Regulate Retinal Neurogenesis
Cited by: 6
Author(s): Brian S. Clark, Joel B. Miesfeld, Michael A. Flinn, Ross F Collery, Brian A. Link
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-75437-3

The Fuchs corneal dystrophy-associated CTG repeat expansion in the TCF4 gene affects transcription from its alternative promoters
Cited by: 9
Author(s): Alex Sirp, K. Costa Morais Leite, Jürgen Tuvikene, Kaja Nurm, Mari Sepp, Tõnis Timmusk
Software Mentions: 2
Published: over 5 years ago

10.3389/fcvm.2021.662870

Acetazolamide Improves Right Ventricular Function and Metabolic Gene Dysregulation in Experimental Pulmonary Arterial Hypertension
Cited by: 4
Author(s): Fotios Spyropoulos, Zoe Michael, Benjamin Finander, Sally H. Vitali, Kosmas Kosmas, Panagiotis Zymaris, Brian T. Kalish, Stella Kourembanas, Helen Christou
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-76193-0

ZNF354C is a transcriptional repressor that inhibits endothelial angiogenic sprouting
Cited by: 5
Author(s): James A. Oo, Barnabas Irmer, Stefan Günther, Timothy Warwick, Katalin Pálfi, Judit Izquierdo Ponce, Tom Teichmann, Beatrice Pflüger‐Müller, Ralf Gilsbach, Ralf P. Brandes, Matthias Leisegang
Software Mentions: 2
Published: over 5 years ago

10.3389/fbioe.2020.01021

GeTallele: A Method for Analysis of DNA and RNA Allele Frequency Distributions
Cited by: 2
Author(s): Piotr Słowiński, Muzi Li, Paula Restrepo, Nawaf Alomran, Liam F. Spurr, C. Ryan Miller, Krasimira Tsaneva-Atanasova, Anélia Horvath
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-77061-7

Peripheral oxytocin injection modulates vomeronasal sensory activity and reduces pup-directed aggression in male mice
Cited by: 9
Author(s): Thiago S. Nakahara, Antônio Pedro Camargo, Pedro H M Magalhães, Mateus A.A. Souza, Pedro G. Ribeiro, Paulo H Martins-Netto, Vinicius Miessler de Andrade Carvalho, Juliana José, Fábio Papes
Software Mentions: 2
Published: over 5 years ago

10.18632/oncotarget.24341

Methotrexate sensitizes drug-resistant metastatic melanoma cells to <i>BRAF</i> V600E inhibitors dabrafenib and encorafenib
Cited by: 8
Author(s): Kayleigh C. Ross, Kevin F Chin, Dae-Hwan Kim, Christopher D. Marion, Timothy Yen, Vikram Bhattacharjee
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-020-77586-x

An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues
Cited by: 15
Author(s): Frédéric Jehl, Kévin Muret, Maria Bernard, Morgane Boutin, Lætitia Lagoutte, Colette Désert, Patrice Déhais, Diane Esquerré, Hervé Acloque, Elisabetta Giuffra, Sarah Djebali, Sylvain Foissac, Thomas Derrien, Frédérique Pitel, Tatiana Zerjal, Christophe Klopp, Sandrine Lagarrigue
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-78297-z

Genes, pathways and networks responding to drought stress in oil palm roots
Cited by: 18
Author(s): Le Wang, May Lee, Baoqing Ye, Gen Hua Yue
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-78507-8

Age related extracellular matrix and interstitial cell phenotype in pulmonary valves
Cited by: 8
Author(s): Shaohua Wu, Vikas Kumar, Xiao Peng, Mitchell Kuss, Jung Yul Lim, Chittibabu Guda, Jonathan T. Butcher, Bin Duan
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-78359-2

Development of a human primary gut-on-a-chip to model inflammatory processes
Cited by: 65
Author(s): Claudia Beaurivage, Austė Kanapeckaitė, Cindy J.M. Loomans, Kai S. Erdmann, Jan Stallen, Richard A. J. Janssen
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-78417-9

The vascular targeted citrus FLOWERING LOCUS T3 gene promotes non-inductive early flowering in transgenic Carrizo rootstocks and grafted juvenile scions
Cited by: 17
Author(s): Juliana M. Soares, Kyle C. Weber, Wenming Qiu, Daniel Stanton, Lamiaa M. Mahmoud, Hao Wu, Patrick Huyck, Janice Zale, Kawther Al Jasim, Jude W. Grosser, Manjul Dutt
Software Mentions: 2
Published: over 5 years ago

10.18632/oncotarget.24422

Human tripartite motif protein 52 is required for cell context-dependent proliferation
Cited by: 11
Author(s): Stefan Benke, Benedikt Agerer, Linda Haas, Martin Stöger, Alexander Lercher, Lisa Gabler, Izabella Kiss, Sara Scinicariello, Walter Berger, Andréas Bergthaler, Anna C. Obenauf, Gijs A. Versteeg
Software Mentions: 2
Published: over 8 years ago

10.3389/fnbeh.2020.00160

Blast-Related Mild TBI Alters Anxiety-Like Behavior and Transcriptional Signatures in the Rat Amygdala
Cited by: 19
Author(s): Jennifer Blaze, Inbae Choi, Zhaoyu Wang, Michelle Umali, Natalia Mendelev, Anna E. Tschiffely, Stephen T. Ahlers, Gregory A. Elder, Yongchao Ge, Fatemeh Haghighi
Software Mentions: 2
Published: almost 6 years ago

10.18632/oncotarget.24862

ONC201 kills breast cancer cells<i>in vitro</i>by targeting mitochondria
Cited by: 70
Author(s): Yoshimi Endo Greer, Natalie Porat-Shliom, Kunio Nagashima, Christina H. Stuelten, Dan Crooks, Vishal N. Kopardé, Sarah L. Gilbert, Celia Islam, Ashley Ubaldini, Yun Ji, Luca Gattinoni, Ferri Soheilian, Xiantao Wang, Markus Hafner, Jyoti Shetty, Bao Tran, Parthav Jailwala, Maggie Cam, Martin Lang, Donna Voeller, William C. Reinhold, Vinodh N. Rajapakse, Yves Pommier, Roberto Weigert, W. Marston Linehan, Stanley Lipkowitz
Software Mentions: 2
Published: over 8 years ago

10.3389/fnagi.2018.00208

The Aβ Containing Brain Extracts Having Different Effects in Alzheimer’s Disease Transgenic Caenorhabditis elegans and Mice
Cited by: 1
Author(s): Yufang Yang, Mo Wang, Ping Yang, Zishan Wang, Li Huang, Jing Xu, Wei Wang, Mei Yu, Liping Bu, Jian Fei, Fang Huang
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-020-77398-z

Extracellular vesicle-associated repetitive element DNAs as candidate osteosarcoma biomarkers
Cited by: 19
Author(s): Linda Cambier, Kevin Stachelek, Martin Tříska, Rima Jubran, Manyu Huang, Wuyin Li, Jianying Zhang, Jitian Li, David Cobrinik
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-80334-w

Mitochondrial gene expression in single cells shape pancreatic beta cells' sub-populations and explain variation in insulin pathway
Cited by: 9
Author(s): Hadar Medini, T. Cohen, Dan Mo
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-79948-x

Role of PAI-1 in hepatic steatosis and dyslipidemia
Cited by: 44
Author(s): Joshua A. Levine, Carlota Oleaga, Mesut Eren, Ansel P. Amaral, Shu Meng, Elizabeth Lux, Sadiya S. Khan, Sanjiv J. Shah, Yasuhiro Omura, Nathalie Pamir, Joshua Hay, Grant D. Barish, Toshio Miyata, Hagai Tavori, Sergio Fazio, Douglas E. Vaughan
Software Mentions: 2
Published: over 5 years ago

10.18632/oncotarget.24808

Transcriptome profiling of the interconnection of pathways involved in malignant transformation and response to hypoxia
Cited by: 1
Author(s): Frida Danielsson, Erik Fasterius, Devin P. Sullivan, Linnea Hases, Kemal Sanli, Cheng Cheng Zhang, Adil Mardinoğlu, Cristina Al-Khalili, Mikael Huss, Mathias Uhlén, Cecilia Williams, Emma Lundberg
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-020-80741-z

Gene expression and functional abnormalities in XX/Sry Leydig cells
Cited by: 3
Author(s): Shogo Yanai, Takashi Baba, Kai Inui, Kanako Miyabayashi, Seongwoo Han, Miki Inoue, Fumiya Takahashi, Masami Kanai‐Azuma, Yasuyuki Ohkawa, Man Ho Choi, Ken Ichirou Morohashi
Software Mentions: 2
Published: over 5 years ago

10.3390/cells10051245

TILLING-by-Sequencing+ Reveals the Role of Novel Fatty Acid Desaturases (GmFAD2-2s) in Increasing Soybean Seed Oleic Acid Content
Cited by: 17
Author(s): Naoufal Lakhssassi, Valéria Stefania Lopes-Caitar, Dounya Knizia, Mallory A Cullen, Oussama Badad, Abdelhalim El Baze, Zhou Zhou, Mohamed G. Embaby, Jonas Meksem, Aicha Lakhssassi, Pengyin Chen, A.A. AbuGhazaleh, Tri D. Vuong, Henry T. Nguyen, Tarek Hewezi, Khalid Meksem
Software Mentions: 2
Published: about 5 years ago

10.3390/cells9061476

RIG-I Plays a Dominant Role in the Induction of Transcriptional Changes in Zika Virus-Infected Cells, which Protect from Virus-Induced Cell Death
Cited by: 28
Author(s): Mirjam Schilling, Anne Bridgeman, Nicki Gray, Jonny Hertzog, Philip Hublitz, Alain Kohl, Jan Rehwinkel
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-80178-4

A role for orphan nuclear receptor liver receptor homolog-1 (LRH-1, NR5A2) in primordial follicle activation
Cited by: 11
Author(s): Marie-Charlotte Meinsohn, Camilla H K Hughes, Anthony Estienne, Hatice D. Saatcioglu, David Pépin, Raj Duggavathi, Bruce D. Murphy
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-79356-1

Late p65 nuclear translocation in glioblastoma cells indicates non-canonical TLR4 signaling and activation of DNA repair genes
Cited by: 6
Author(s): Isabele Fattori Moretti, Antônio M. Lerário, Marina Trombetta-Lima, Paula R. Sola, Roseli da Silva Soares, Sueli Mieko Oba-Shinjo, Suely Kazue Nagahashi Marie
Software Mentions: 2
Published: over 5 years ago

10.18632/oncotarget.25188

The critical role that STAT3 plays in glioma-initiating cells: STAT3 addiction in glioma
Cited by: 41
Author(s): Debolina Ganguly, Meiyun Fan, Chuan Yang, Blazej Zbytek, David Finkelstein, Martine F. Roussel, Lawrence M. Pfeffer
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pgen.1008707

Pleiotropy facilitates local adaptation to distant optima in common ragweed (Ambrosia artemisiifolia)
Cited by: 26
Author(s): Tuomas Hämälä, Amanda J. Gorton, David A. Moeller, Peter Tiffin
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-021-81794-4

Valproic acid influences the expression of genes implicated with hyperglycaemia-induced complement and coagulation pathways
Cited by: 17
Author(s): Marina Barreto Felisbino, Mark Ziemann, Ishant Khurana, Jun Okabe, Keith Al-Hasani, Scott Maxwell, K N Harikrishnan, C. Oliveira, Maria Luiza S. Mello, Assam El‐Osta
Software Mentions: 2
Published: over 5 years ago

10.3390/cells8091069

Single-Cell Transcriptomes Reveal Characteristic Features of Mouse Hepatocytes with Liver Cholestatic Injury
Cited by: 12
Author(s): Na Chang, Lei Tian, Xiaofang Ji, Xuan Zhou, Lei Hou, Xinhao Zhao, Yang Yang, Lin Yang, Liying Li
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pgen.1006512

Extensive Regulation of Diurnal Transcription and Metabolism by Glucocorticoids
Cited by: 42
Author(s): Benjamin D. Weger, Meltem Weger, Benjamin Görling, Andrea Schink, Cédric Gobet, Céline Keime, Gernot Poschet, Bernard Jost, Nils Krone, Rüdiger Hell, Frédéric Gachon, Burkhard Luy, Thomas Dickmeis
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-021-81340-2

Screening for potential targets to reduce stenosis in bioprosthetic heart valves
Cited by: 3
Author(s): Rudi Foth, Orr Shomroni, Matthias Sigler, Jürgen Hörer, Julie Cleuziou, Thomas Paul, Katja Eildermann
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-82672-9

Temperature and species-dependent regulation of browning in retrobulbar fat
Cited by: 0
Author(s): Fatemeh Rajaii, Dong Won Kim, Jianbo Pan, Nicholas R. Mahoney, Charles G. Eberhart, Jiang Qian, Seth Blackshaw
Software Mentions: 2
Published: over 5 years ago

10.3390/cells10092253

Dynamic, Transient, and Robust Increase in the Innervation of the Inflamed Mucosa in Inflammatory Bowel Diseases
Cited by: 3
Author(s): Miguel Gonzalez Acera, Marvin Bubeck, Fabrizio Mascia, Leonard Diemand, Gregor Sturm, Anja A. Kühl, Raja Atreya, Dieter Chichung Lie, Markus F. Neurath, Michael Schümann, Christoph S. N. Klose, Zlatko Trajanoski, Christoph Becker, Jay V. Patankar
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pgen.1008249

Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome
Cited by: 14
Author(s): Jason Talkish, Haller Igel, Rhonda Perriman, Lily Shiue, Sol Katzman, Elizabeth M. Munding, Robert Shelansky, John P. Donohue, Manuel Ares
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-021-82202-7

RNAseq shows an all-pervasive day-night rhythm in the transcriptome of the pacemaker of the heart
Cited by: 7
Author(s): Yanwen Wang, Cali Anderson, Halina Dobrzynski, George Hart, Alicia D’Souza, Mark R. Boyett
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-82551-3

Arsenic hexoxide has differential effects on cell proliferation and genome-wide gene expression in human primary mammary epithelial and MCF7 cells
Cited by: 8
Author(s): Donguk Kim, Na Yeon Park, Keunsoo Kang, Stuart K. Calderwood, Dong‐Hyung Cho, Ill Ju Bae, Heeyoun Bunch
Software Mentions: 2
Published: over 5 years ago

10.3390/cells10020273

MicroRNA Profiling of HL-1 Cardiac Cells-Derived Extracellular Vesicles
Cited by: 1
Author(s): Serena Silvestro, Agnese Gugliandolo, Luigi Chiricosta, Francesca Diomede, Oriana Trubiani, Placido Bramantı, Jacopo Pizzicannella, Emanuela Mazzon
Software Mentions: 2
Published: over 5 years ago

10.1128/JVI.02102-20

Segment-Specific Kinetics of mRNA, cRNA, and vRNA Accumulation during Influenza Virus Infection
Cited by: 21
Author(s): Thu T Phan, Elizabeth J. Fay, Zion Lee, Stephanie L. Aron, Wei Shou Hu, Ryan A. Langlois
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-021-83215-y

Modulating the unfolded protein response with ONC201 to impact on radiation response in prostate cancer cells
Cited by: 7
Author(s): Francesca Amoroso, Kimberley Glass, Reema Singh, Francisco Liberal, R.E. Steele, Sarah Maguire, Rohinton S. Tarapore, Joshua E. Allen, Sandra Van Schaeybroeck, Karl T. Butterworth, Kevin M. Prise, Joe M. O’Sullivan, Suneil Jain, David J. Waugh, Ian G. Mills
Software Mentions: 2
Published: over 5 years ago

Projects: cran: STAR

Science Score: 100/100

Bonuses:

Papers Mentioning STAR 5,759