Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: SPUTNIK

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SPUTNIK

SPatially aUTomatic deNoising for Ims toolKit
18 versions
Latest release: almost 2 years ago
288 downloads last month

Papers Mentioning SPUTNIK 17

A Novel Validated Injectable Colistimethate Sodium Analysis Combining Advanced Chemometrics and Design of Experiments
Cited by: 3
Author(s): Ioanna Dagla, Anthony Tsarbopoulos, Evagelos Gikas
Software Mentions: 3
Published: over 3 years ago

10.1007/s00259-020-05089-y

Impact of solitary pulmonary nodule size on qualitative and quantitative assessment using 18F-fluorodeoxyglucose PET/CT: the SPUTNIK trial
Cited by: 9
Author(s): Jonathan R. Weir‐McCall, Scott Harris, Kenneth A. Miles, Nagmi R. Qureshi, Robert C. Rintoul, Sabina Dizdarevic, Lucy Pike, Heok Cheow, Fiona J. Gilbert
Software Mentions: 3
Published: about 4 years ago

10.1186/1471-2105-10-41

STAMP: Extensions to the STADEN sequence analysis package for high throughput interactive microsatellite marker design
Cited by: 37
Author(s): Lars Kraemer, Bánk Beszteri, Steffi Gäbler‐Schwarz, Christoph Held, Florian Leese, Christoph Mayer, Kevin Pöhlmann, Stephan Frickenhaus
Software Mentions: 3
Published: almost 16 years ago

10.1186/1471-2164-12-283

Characterisation of the transcriptome of a wild great tit Parus major population by next generation sequencing
Cited by: 64
Author(s): Anna W. Santure, Jacob Gratten, Jim A. Mossman, Ben C. Sheldon, Jon Slate
Software Mentions: 2
Published: over 13 years ago

10.1186/1471-2164-14-180

A combined strategy involving Sanger and 454 pyrosequencing increases genomic resources to aid in the management of reproduction, disease control and genetic selection in the turbot (Scophthalmus maximus)
Cited by: 43
Author(s): Laia Ribas, Belén G. Pardo, Carlos Fernández, José Antonio Álvarez‐Dios, María Isabel Quiroga, Josep V. Planas, Ariadna Sitjà‐Bobadilla, Paulino Martı́nez, Francesc Piferrer
Software Mentions: 2
Published: over 11 years ago

10.1186/1471-2164-9-423

Development of genomic resources for Citrus clementina: Characterization of three deep-coverage BAC libraries and analysis of 46,000 BAC end sequences
Cited by: 82
Author(s): Javier Terol, Miguel A. Gutiérrez–Naranjo, Patrick Ollitrault, Manuel Talón
Software Mentions: 2
Published: about 16 years ago

10.1093/bioinformatics/bty622

SPUTNIK: an R package for filtering of spatially related peaks in mass spectrometry imaging data
Cited by: 17
Author(s): Paolo Inglese, Gonçalo dos Santos Correia, Zoltan Takáts, Jeremy K. Nicholson, Robert C. Glen
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2229-6-16

Cited by: 32
Author(s): Charlotte Lindqvist, Anne‐Cathrine Scheen, Mi‐Jeong Yoo, Paris H. Grey, David G Oppenheimer, James H. Leebens‐Mack, Douglas E. Soltis, Pamela S. Soltis, Victor A. Albert
Software Mentions: 1
Published: almost 19 years ago

10.1186/1746-6148-4-37

Expressed sequence tags (ESTs) from immune tissues of turbot (Scophthalmus maximus) challenged with pathogens
Cited by: 62
Author(s): Belén G. Pardo, Carlos Fernández, Adrián Millán, Carmen Bouza, Araceli Vázquez-López, Manuel Vera, J. Alvarez-Dios, Manuel Calaza, María Vázquez, Santiago Cabaleiro, Beatríz Magariños, Manuel L. Lemos, J. Leiro, Paulino Martı́nez
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0156633

Characterization and Transferable Utility of Microsatellite Markers in the Wild and Cultivated Arachis Species
Cited by: 20
Author(s): Li Huang, Bei Wu, Jiaojiao Zhao, Haitao Li, Weigang Chen, Yanli Zheng, Xiaoping Ren, Yuning Chen, Xiaojing Zhou, Yong Lei, Boshou Liao, Huifang Jiang
Software Mentions: 1
Published: over 8 years ago

10.2478/raon-2021-0024

Can dynamic imaging, using <sup>18</sup>F-FDG PET/CT and CT perfusion differentiate between benign and malignant pulmonary nodules?
Cited by: 10
Author(s): Aleksander Marin, John T Murchison, K Skwarski, Adriana Tavares, Alison Fletcher, William Wallace, Vladka Salapura, Edwin Jacques Rudolph van Beek, Saeed Mirsadraee
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2164-10-432

Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa
Cited by: 109
Author(s): Hye‐Ran Kim, Su Ryun Choi, Jina Bae, Chang Pyo Hong, Seo Yeon Lee, Jamil Hossain, Dan Nguyen, Mina Jin, Beom-Seok Park, Jae-Wook Bang, Ian Bancroft, Yong Pyo Lim
Software Mentions: 1
Published: about 15 years ago

10.1186/1471-2164-12-317

Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance
Cited by: 133
Author(s): Barbara Feldmeyer, Christopher W. Wheat, Nicolas Krezdorn, Bjoern Rotter, Markus Pfenninger
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2164-12-265

Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery
Cited by: 173
Author(s): Sukhjiwan Kaur, Noel O. I. Cogan, Luke W. Pembleton, Maiko Shinozuka, Keith W. Savin, Michael Materne, John W. Forster
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2164-9-620

Use of genome sequence data in the design and testing of SSR markers for Phytophthora species
Cited by: 29
Author(s): Leonardo Schena, Linda Cardle, D. E. L. Cooke
Software Mentions: 1
Published: almost 17 years ago

10.1186/1471-2164-14-176

High-utility conserved avian microsatellite markers enable parentage and population studies across a wide range of species
Cited by: 72
Author(s): Deborah A. Dawson, Alexander D. Ball, Lewis G. Spurgin, David Martín‐Gálvez, Ian Stewart, Gavin J. Horsburgh, Jacqueline Potter, Mercedes Molina‐Morales, Anthony W. J. Bicknell, Stephanie A. J. Preston, Robert Ekblom, Jon Slate, Terry Burke
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2164-11-218

A comparison of SNPs and microsatellites as linkage mapping markers: lessons from the zebra finch (Taeniopygia guttata)
Cited by: 81
Author(s): Alexander D. Ball, Jessica Stapley, Deborah A. Dawson, Tim R. Birkhead, Terry Burke, Jon Slate
Software Mentions: 1
Published: almost 15 years ago