Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: SPOT

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SPOT

Sequential Parameter Optimization Toolbox
31 versions
Latest release: over 2 years ago
4 dependent packages
616 downloads last month

Papers Mentioning SPOT 551

10.1128/mBio.01891-21
Secondary Metabolites from Food-Derived Yeasts Inhibit Virulence of Candida albicans
Cited by: 6
Author(s): Lohith Kunyeit, Nawneet K. Kurrey, K A Anu-Appaiah, Reeta P. Rao
Software Mentions: 1
Published: about 3 years ago
10.1128/mSphere.00587-18
The Protective Role of <i>Bacteroides fragilis</i> in a Murine Model of Colitis-Associated Colorectal Cancer
Cited by: 79
Author(s): Yun Kyung Lee, Parpi Mehrabian, Silva Boyajian, Wei Wu, Jane Selicha, Steven Vonderfecht, Sarkis K. Mazmanian
Software Mentions: 1
Published: almost 6 years ago
10.1128/mSphere.00561-18
sRNA Target Prediction Organizing Tool (SPOT) Integrates Computational and Experimental Data To Facilitate Functional Characterization of Bacterial Small RNAs
Cited by: 18
Author(s): Alisa King, Carin K. Vanderpool, Patrick H. Degnan
Software Mentions: 1
Published: over 5 years ago
10.1107/S2052252517013495
Lifetimes and spatio-temporal response of protein crystals in intense X-ray microbeams
Cited by: 20
Author(s): Matthew Warkentin, Hakan Atakişi, Jesse B. Hopkins, Donald A. Walko, Robert Thorne
Software Mentions: 1
Published: about 7 years ago
10.1186/1756-9966-31-41
Lysosomal Membrane Permeabilization is an Early Event in Sigma-2 Receptor Ligand Mediated Cell Death in Pancreatic Cancer
Cited by: 62
Author(s): John R. Hornick, Suwanna Vangveravong, Dirk Spitzer, Carmen Abate, Francesco Berardi, Peter S. Goedegebuure, Robert H. Mach, William G. Hawkins
Software Mentions: 1
Published: over 12 years ago
10.1155/2014/429359
Primary Stability of Self-Drilling and Self-Tapping Mini-Implant in Tibia of Diabetes-Induced Rabbits
Cited by: 5
Author(s): Jea-Beom Park, Eun Young Kim, Janghyun Paek, Yoon‐Ah Kook, Dawoon Jeong, Il-Sik Cho, Gerald Nelson
Software Mentions: 1
Published: almost 11 years ago
10.1155/2014/838356
Evaluation of Stability of Surface-Treated Mini-Implants in Diabetic Rabbits
Cited by: 7
Author(s): Nam-Hee Oh, Eun Young Kim, Janghyun Paek, Yoon‐Ah Kook, Dawoon Jeong, Il-Sik Cho, Gerald Nelson
Software Mentions: 1
Published: almost 11 years ago
10.3390/jfb12010002
Biocompatibility and Biological Corrosion Resistance of Ti–39Nb–6Zr+0.45Al Implant Alloy
Cited by: 14
Author(s): Yujin Hwang, Young-Sin Choi, Yunho Hwang, Hyunwook Cho, Dong‐Geun Lee
Software Mentions: 1
Published: almost 4 years ago
10.3892/ijo.2012.1496
uPAR and cathepsin B knockdown inhibits radiation-induced PKC integrated integrin signaling to the cytoskeleton of glioma-initiating cells
Cited by: 22
Author(s): Kiranmai Alapati, Sreelatha Gopinath, Rama Rao Malla, Venkata Ramesh Dasari, Jasti S. Rao
Software Mentions: 1
Published: over 12 years ago
10.22038/ijbms.2020.37277.8874
Biochemical and computational study of an alginate lyase produced by Pseudomonas aeruginosa strain S21.
Cited by: 0
Author(s): Firoozeh Piroozmand, Parinaz Ghadam, Mahboobe Zarrabi, Ahya Abdi-Ali
Software Mentions: 1
Published: over 4 years ago
10.3390/ijerph110504676
A Lightweight Web of Things Open Platform to Facilitate Context Data Management and Personalized Healthcare Services Creation
Cited by: 17
Author(s): Iván Corredor, Eduardo Metola, Ana M. Bernardos, Paula Tarrío, José R. Casar
Software Mentions: 1
Published: over 10 years ago
10.3390/ijerph16020266
Integrating Landscape Metrics and Hydrologic Modeling to Assess the Impact of Natural Disturbances on Ecohydrological Processes in the Chenyulan Watershed, Taiwan
Cited by: 12
Author(s): Li-Chi Chiang, Yi-Ting Chuang, Chin‐Chuan Han
Software Mentions: 1
Published: almost 6 years ago
10.3390/ijerph16111926
The Safer Prescription of Opioids Tool (SPOT): A Novel Clinical Decision Support Digital Health Platform for Opioid Conversion in Palliative and End of Life Care—A Single-Centre Pilot Study
Cited by: 3
Author(s): Roger Flint, Deans Buchanan, Scott Jamieson, Alfred Cuschieri, Shady Botros, Joanna Forbes, Jacob George
Software Mentions: 1
Published: over 5 years ago
10.3390/ijerph18030902
Examining Obedience Training as a Physical Activity Intervention for Dog Owners: Findings from the Stealth Pet Obedience Training (SPOT) Pilot Study
Cited by: 3
Author(s): Katie Potter, Brittany Masteller, Laura B. Balzer
Software Mentions: 1
Published: almost 4 years ago
10.2196/27168
Web-Based Multifaceted Approach for Community-Based HIV Self-Testing Among Female Sex Workers in Indonesia: Protocol for a Randomized Community Trial
Cited by: 0
Author(s): Jessie Olivia Yunus, Anak Agung Sagung Sawitri, Dewa Nyoman Wirawan, I Gusti Agung Agus Mahendra, Dewi Susanti, Ni Kadek Ayu Dwi Utami Ds, Dedison Asanab, Ida Ayu Narayani, Oldri Sherli Mukuan, Asti Widihastuti, Robert J. Magnani, Pande Putu Januraga
Software Mentions: 1
Published: over 3 years ago
10.1136/jitc-2020-001179
Skin immunization for effective treatment of multifocal melanoma refractory to PD1 blockade and Braf inhibitors
Cited by: 2
Author(s): Xinchang Hao, Louis D. Falo, Guo Chen, Jiying Zhang, Cara Donahue Carey, Walter J. Storkus, Zhaoyang You
Software Mentions: 1
Published: almost 4 years ago
10.1194/jlr.M072132
Complete deletion of Cd39 is atheroprotective in apolipoprotein E-deficient mice
Cited by: 11
Author(s): M. De Giorgi, Keiichi Enjyoji, Gordon Jiang, Eva Csizmadia, Shuji Mitsuhashi, Richard J. Gumina, Ryszard T. Smolenski, Simon C. Robson
Software Mentions: 1
Published: over 7 years ago
10.1186/1750-2187-2-7
Sensitization of TRAIL-resistant LNCaP cells by resveratrol (3, 4', 5 tri-hydroxystilbene): molecular mechanisms and therapeutic potential
Cited by: 84
Author(s): Sharmila Shankar, Qinghe Chen, Imtiaz A. Siddiqui, Krishna Sarva, Rakesh K. Srivastava
Software Mentions: 1
Published: about 17 years ago
10.7554/eLife.40499
Quantitative mapping of protein-peptide affinity landscapes using spectrally encoded beads
Cited by: 49
Author(s): Huy Nguyen, Jagoree Roy, Björn Harink, Nikhil P Damle, Naomi R. Latorraca, Brian C. Baxter, Kara Brower, Scott A. Longwell, Tanja Kortemme, Kurt S. Thorn, Martha S. Cyert
Software Mentions: 1
Published: over 5 years ago
10.7554/eLife.59751
Contribution of dorsal horn CGRP-expressing interneurons to mechanical sensitivity
Cited by: 16
Author(s): Line Löken, João Braz, Alexander Etlin, Mahsa Sadeghi, Mollie Bernstein, Madison Jewell, Marilyn Steyert, Julia Kuhn, Katherine Hamel, Ida J. Llewellyn‐Smith, Allan I. Basbaum
Software Mentions: 1
Published: over 3 years ago
10.7554/eLife.53603
Caenorhabditis elegans PIEZO channel coordinates multiple reproductive tissues to govern ovulation
Cited by: 27
Author(s): Xiaofei Bai, Jeff Bouffard, Avery Lord, Katherine I Brugman, Paul W. Sternberg, Erin J. Cram, Andy Golden
Software Mentions: 1
Published: over 4 years ago
10.7554/eLife.54726
3,6’-dithiopomalidomide reduces neural loss, inflammation, behavioral deficits in brain injury and microglial activation
Cited by: 22
Author(s): Chih Tung Lin, Daniele Lecca, Ling Yang, Weiming Luo, Michael T. Scerba, David Tweedie, Pen Sen Huang, Yoo Jin Jung, Do Kyung Kim, Chih Hao Yang, Barry J. Hoffer, Jia Yi Wang, Nigel H. Greig
Software Mentions: 1
Published: over 4 years ago
10.7554/eLife.21992
The ceramide synthase 2b gene mediates genomic sensing and regulation of sphingosine levels during zebrafish embryogenesis
Cited by: 14
Author(s): Karen Mendelson, Suveg Pandey, Yu Hisano, Frank Carellini, Bhaskar Das, Timothy Hla, Todd Evans
Software Mentions: 1
Published: about 7 years ago
10.7554/eLife.58053
Downregulation of the tyrosine degradation pathway extends Drosophila lifespan
Cited by: 22
Author(s): Andrey A. Parkhitko, Divya Ramesh, Lin Wang, Dmitry Leshchiner, Elizabeth Filine, Richard Binari, Abby L. Olsen, John M. Asara, Valentin Cracan, Joshua D. Rabinowitz, Axel Brockmann, Norbert Perrimon
Software Mentions: 1
Published: almost 4 years ago
10.3390/ijms161125952
Computational Prediction of RNA-Binding Proteins and Binding Sites
Cited by: 55
Author(s): Jing-Na Si, Jing Cui, Jin Q. Cheng, Rongling Wu
Software Mentions: 1
Published: about 9 years ago
10.3390/ijms17091445
Exposure to Zinc Sulfate Results in Differential Effects on Olfactory Sensory Neuron Subtypes in Adult Zebrafish
Cited by: 18
Author(s): James Hentig, Christine A. Byrd-Jacobs
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms20030502
Post-Injury Neuroprotective Effects of the Thalidomide Analog 3,6′-Dithiothalidomide on Traumatic Brain Injury
Cited by: 18
Author(s): Batsaikhan Buyandelger, Jing Ya Wang, Michael T. Scerba, David Tweedie, Nigel H. Greig, Jonathan P. Miller, Barry J. Hoffer, Chih Tung Lin, Jia Yi Wang
Software Mentions: 1
Published: almost 6 years ago
10.3390/ijms20061274
The Effect of Green and Black Tea Polyphenols on BRCA2 Deficient Chinese Hamster Cells by Synthetic Lethality through PARP Inhibition
Cited by: 4
Author(s): Shaherah Alqahtani, Kelly Welton, Jeffrey P. Gius, Suad Elmegerhi, Takamitsu A. Kato
Software Mentions: 1
Published: over 5 years ago
10.3390/ijms20184352
Decreased Level of Neurotrophic Factor Neuritin 1 in Women with Ovarian Endometriosis after Receiving Gonadotropin-Releasing Hormone Agonist Treatment
Cited by: 3
Author(s): Endah Rahmawati, Wei Yang, Yen Ping Lei, Pawan Kumar Maurya, Huei‐Wen Chen, Chii‐Ruey Tzeng
Software Mentions: 1
Published: about 5 years ago
10.3390/ijms21124215
1,25(OH)2D3 Alleviates Aβ(25-35)-Induced Tau Hyperphosphorylation, Excessive Reactive Oxygen Species, and Apoptosis Through Interplay with Glial Cell Line-Derived Neurotrophic Factor Signaling in SH-SY5Y Cells
Cited by: 22
Author(s): Chin-Kai Lin, Yi Chang, Ning Jo Kao, Wei‐Ju Lee, Tzu Wen L. Cross, Shyh Hsiang Lin
Software Mentions: 1
Published: over 4 years ago
10.3390/ijms21155461
A Modified Protocol of Diethylnitrosamine Administration in Mice to Model Hepatocellular Carcinoma
Cited by: 13
Author(s): Azra Memon, Yuliya Pyao, Yerin Jung, Jung Il Lee, Woon Kyu Lee
Software Mentions: 1
Published: over 4 years ago
10.3390/ijms21186661
MALDI-TOF Mass Spectrometry Revealed Significant Lipid Variations in Follicular Fluid and Somatic Follicular Cells but Not in Enclosed Oocytes between the Large Dominant and Small Subordinate Follicles in Bovine Ovary
Cited by: 13
Author(s): Priscila Bertevello, Ana-Paula Teixeira-Gomes, Valérie Labas, Luiz Cordeiro, Marie-Claire Blache, Pascal Papillier, Г. Н. Сингина, Rustem Uzbekov, Virginie Maillard, Svetlana Uzbekova
Software Mentions: 1
Published: about 4 years ago
10.3390/ijms21239176
RB Regulates DNA Double Strand Break Repair Pathway Choice by Mediating CtIP Dependent End Resection
Cited by: 13
Author(s): You-Ming Jiang, Jason C. Yam, Clement C. Tham, Chi Pui Pang, Wai Kit Chu
Software Mentions: 1
Published: almost 4 years ago
10.3390/ijms22158276
3,6′-Dithiopomalidomide Ameliorates Hippocampal Neurodegeneration, Microgliosis and Astrogliosis and Improves Cognitive Behaviors in Rats with a Moderate Traumatic Brain Injury
Cited by: 9
Author(s): Pen-Sen Huang, Ping-Yen Tsai, Lingyu Yang, Daniele Lecca, Weiming Luo, Do Kyung Kim, Barry J. Hoffer, Yung-Hsiao Chiang, Nigel H. Greig, Jia Yi Wang
Software Mentions: 1
Published: over 3 years ago
10.3390/ijms22179632
Targeted Disruption of the Inhibitor of DNA Binding 4 (Id4) Gene Alters Photic Entrainment of the Circadian Clock
Cited by: 2
Author(s): Giles E. Duffield, Maricela Robles-Murguia, Tim Y. Hou, Kathleen A McDonald
Software Mentions: 1
Published: about 3 years ago
10.3390/ijms221910687
Poly ADP Ribose Polymerase Inhibitor Olaparib Targeting Microhomology End Joining in Retinoblastoma Protein Defective Cancer: Analysis of the Retinoblastoma Cell-Killing Effects by Olaparib after Inducing Double-Strand Breaks
Cited by: 3
Author(s): You-Ming Jiang, Jason C. Yam, Wai Kit Chu
Software Mentions: 1
Published: about 3 years ago
10.1186/s12974-015-0370-0
1,25-Dihydroxyvitamin D3 attenuates endotoxin-induced production of inflammatory mediators by inhibiting MAPK activation in primary cortical neuron-glia cultures
Cited by: 61
Author(s): Ya‐Fang Huang, Yi Jung Ho, Chien Cheng Lai, Chien Tsai Chiu, Jia Yi Wang
Software Mentions: 1
Published: over 9 years ago
10.1186/s12974-016-0631-6
Pomalidomide mitigates neuronal loss, neuroinflammation, and behavioral impairments induced by traumatic brain injury in rat
Cited by: 35
Author(s): Jinya Wang, Yu‐ming M. Huang, Chong‐Chi Chiu, David Tweedie, Weiming Luo, Chaim G. Pick, Szu Yi Chou, Yu Luo, Barry J. Hoffer, Nigel H. Greig, Jia Yi Wang
Software Mentions: 1
Published: over 8 years ago
10.1186/s12974-016-0490-1
Deletion of the hemopexin or heme oxygenase-2 gene aggravates brain injury following stroma-free hemoglobin-induced intracerebral hemorrhage
Cited by: 50
Author(s): Bo Ma, Jason Day, Harrison Phillips, Bryan Slootsky, Emanuela Tolosano, Sylvain Doré
Software Mentions: 1
Published: almost 9 years ago
10.1186/s12974-019-1492-6
Adiponectin suppresses amyloid-β oligomer (AβO)-induced inflammatory response of microglia via AdipoR1-AMPK-NF-κB signaling pathway
Cited by: 69
Author(s): Min Jian, Jason Shing-Cheong Kwan, M Bunting, Roy Chun-Laam Ng, Koon Ho Chan
Software Mentions: 1
Published: over 5 years ago
10.1186/1742-2094-8-22
Expression and cellular localization of cyclooxygenases and prostaglandin E synthases in the hemorrhagic brain
Cited by: 58
Author(s): Tao Wu, Wei He, Jessica Wang, Jian Wang
Software Mentions: 1
Published: over 13 years ago
10.1186/s12974-020-01913-2
Memantine ameliorates motor impairments and pathologies in a mouse model of neuromyelitis optica spectrum disorders
Cited by: 16
Author(s): Leung-Wah Yick, Chi-Ho Tang, Oscar Ka-Fai, Jason Shing-Cheong Kwan, Koon‐Ho Chan
Software Mentions: 1
Published: over 4 years ago
10.1186/1742-2094-10-97
Chronic oral administration of minocycline to sheep with ovine CLN6 neuronal ceroid lipofuscinosis maintains pharmacological concentrations in the brain but does not suppress neuroinflammation or disease progression
Cited by: 20
Author(s): Graham W. Kay, David N. Palmer
Software Mentions: 1
Published: over 11 years ago
10.1186/1742-2094-10-83
The role of microglia and the TLR4 pathway in neuronal apoptosis and vasospasm after subarachnoid hemorrhage
Cited by: 139
Author(s): Khalid A. Hanafy
Software Mentions: 1
Published: over 11 years ago
10.1002/jnr.24493
Phenotype onset in Huntington’s disease knock‐in mice is correlated with the incomplete splicing of the mutant huntingtin gene
Cited by: 30
Author(s): Nicholas R. Franich, Miriam A. Hickey, Chunni Zhu, Georgina F Osborne, Nadira Ali, Tiffany Chu, Nicholas Bove, Vincent Lemesre, Renata P. Lerner, Scott Zeitlin, David Howland, Andreas Neueder, Christian Landles, Gillian P. Bates, Marie‐Françoise Chesselet
Software Mentions: 1
Published: over 5 years ago
10.1002/jnr.24780
Select neurotrophins promote oligodendrocyte progenitor cell process outgrowth in the presence of chondroitin sulfate proteoglycans
Cited by: 8
Author(s): Justin R. Siebert, Donna J. Osterhout
Software Mentions: 1
Published: almost 4 years ago
10.1155/2021/6612476
Comparing School-Aged Refraction Measurements Using the 2WIN-S Portable Refractor in Relation to Cycloplegic Retinoscopy: A Cross-Sectional Study
Cited by: 0
Author(s): Ziming Liu, Emmanuel Eric Pazo, Hong Ye, Yu Cui, Ling Xu, Wei He
Software Mentions: 1
Published: over 3 years ago
10.18632/oncotarget.8557
MiR-429 reverses epithelial-mesenchymal transition by restoring E-cadherin expression in bladder cancer
Cited by: 58
Author(s): Ching-Tang Wu, Jar‐Yi Ho, Shu-Hsien Chou, Dah‐Shyong Yü
Software Mentions: 1
Published: over 8 years ago
10.18632/oncotarget.9238
Homeobox protein VentX induces p53-independent apoptosis in cancer cells
Cited by: 11
Author(s): Hong Gao, Bin Wu, Yi Le, Zhongqi Zhu
Software Mentions: 1
Published: over 8 years ago
10.18632/oncotarget.12604
Compound genetically engineered mouse models of cancer reveal dual targeting of ALK1 and endoglin as a synergistic opportunity to impinge on angiogenic TGF-β signaling
Cited by: 8
Author(s): Nikolas Eleftheriou, Jonas Sjölund, Matteo Bocci, Eliane Cortez, Se Jin Lee, Sara I. Cunha, Kristian Pietras
Software Mentions: 1
Published: about 8 years ago
10.18632/oncotarget.14580
Gadd45a deficiency accelerates BCR-ABL driven chronic myelogenous leukemia
Cited by: 12
Author(s): Kaushiki Mukherjee, Xiaojin Sha, Andrew Magimaidas, Silvia Maifrede, Tomasz Skórski, Smita Bhatia, Barbara Hoffman, Dan A. Liebermann
Software Mentions: 1
Published: almost 8 years ago
10.18632/oncotarget.16767
Metabolic targeting of EGFRvIII/PDK1 axis in temozolomide resistant glioblastoma
Cited by: 27
Author(s): Kiran Kumar Velpula, Maheedhara R. Guda, Kamlesh Kumar Sahu, Jack A. Tuszyński, Swapna Asuthkar, Sarah E. Bach, Justin D. Lathia, Andrew J. Tsung
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.19586
FZD7 is a novel prognostic marker and promotes tumor metastasis via WNT and EMT signaling pathways in esophageal squamous cell carcinoma
Cited by: 21
Author(s): Ting Cao, Di Xiang, Bei Lei Liu, Tu Huang, Bin Tan, Chui Zeng, Zhong Yuan Wang, Xiao Ming, Li Yi Zhang, Guangyi Jin, Feng Li, Jiahui Wu, Xin Yuan Guan, Desheng Lu, Li Fu
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.21869
Human CRL4DDB2 ubiquitin ligase preferentially regulates post-repair chromatin restoration of H3K56Ac through recruitment of histone chaperon CAF-1
Cited by: 4
Author(s): Qianzheng Zhu, Shengcai Wei, Nidhi Sharma, Gulzar Wani, Jinshan He, Altaf A. Wani
Software Mentions: 1
Published: about 7 years ago
10.18632/oncotarget.21972
KLF15 promotes the proliferation and metastasis of lung adenocarcinoma cells and has potential as a cancer prognostic marker
Cited by: 18
Author(s): Lihua Gao, Hongmei Qiu, Jian Liu, Yihui Ma, Jia Feng, Qian Li, Jianguo Zhang, Yifei Liu, Tingting Bian
Software Mentions: 1
Published: about 7 years ago
10.18632/oncotarget.25824
A comprehensive evaluation of Hippo pathway silencing in sarcomas
Cited by: 18
Author(s): Nicole Merritt, Colleen Fullenkamp, Sarah L. Hall, Qining Qian, Chandni Desai, Jon Thomason, Allyn M. Lambertz, Adam J. Dupuy, Benjamin W. Darbro, Munir R. Tanas
Software Mentions: 1
Published: over 6 years ago
10.1021/acs.jproteome.0c00986
Secondary Structures of Proteins: A Comparison of Models and Experimental Results
Cited by: 2
Author(s): M. Bokor, Ágnes Tantos
Software Mentions: 1
Published: over 3 years ago
10.1002/term.544
The effects of iron oxide incorporation on the chondrogenic potential of three human cell types
Cited by: 22
Author(s): Subhas Chandra Saha, Xuebin Yang, Steven F. Tanner, Stephen J. Curran, David Wood, Jennifer Kirkham
Software Mentions: 1
Published: over 12 years ago
10.1186/s12967-021-02836-z
Cigarette smoke-associated inflammation impairs bone remodeling through NFκB activation
Cited by: 8
Author(s): Yi Lü, Y. Peter Di, Ming Chang, Xin Huang, Qiuyan Chen, Ni Hong, Beth Kahkonen, Marissa E Di, Chih Teng Yu, Evan T. Keller, Jian Zhang
Software Mentions: 1
Published: over 3 years ago
10.1186/1479-5876-9-90
Functional characterization of human Cd33+ And Cd11b+ myeloid-derived suppressor cell subsets induced from peripheral blood mononuclear cells co-cultured with a diverse set of human tumor cell lines
Cited by: 186
Author(s): Melissa G. Lechner, Carolina Megiel, Sarah M. Russell, Brigid Bingham, N. Arger, Tammy T. Woo, Alan L. Epstein
Software Mentions: 1
Published: over 13 years ago
10.1186/1479-5876-9-68
Improvement of cardiac contractile function by peptide-based inhibition of NF-κB in the utrophin/dystrophin-deficient murine model of muscular dystrophy
Cited by: 37
Author(s): Dawn A. Delfín, Ying Xu, James W. Peterson, Denis C. Guttridge, Jill A. Rafael‐Fortney, Paul M. L. Janssen
Software Mentions: 1
Published: over 13 years ago
10.1523/ENEURO.0234-17.2017
Caveolin1 Identifies a Specific Subpopulation of Cerebral Cortex Callosal Projection Neurons (CPN) Including Dual Projecting Cortical Callosal/Frontal Projection Neurons (CPN/FPN)
Cited by: 14
Author(s): Jessica L. MacDonald, Ryann M. Fame, Eva Mae Gillis-Buck, Jeffrey D. Macklis
Software Mentions: 1
Published: almost 7 years ago
10.1523/ENEURO.0055-21.2021
Modeling Neurodevelopmental Disorders and Epilepsy Caused by Loss of Function of<i>kif2a</i>in Zebrafish
Cited by: 5
Author(s): Michèle Partoens, Ann-Sofie De Meulemeester, Hoi-Khoanh Giong, Duc-Hung Pham, Jeong-Soo Lee, Peter de Witte, Aleksandra Siekierska
Software Mentions: 1
Published: over 3 years ago
10.3389/fnmol.2017.00219
Differential Impact of miR-21 on Pain and Associated Affective and Cognitive Behavior after Spared Nerve Injury in B7-H1 ko Mouse
Cited by: 17
Author(s): Franziska Karl, Anne Grießhammer, Nurcan Üçeyler, Claudia Sommer
Software Mentions: 1
Published: over 7 years ago
10.1007/s00401-014-1284-0
Cutaneous neuropathy in Parkinson’s disease: a window into brain pathology
Cited by: 189
Author(s): Kathrin Doppler, Sönke Ebert, Nurcan Üçeyler, Claudia Trenkwalder, Jens Ebentheuer, Jens Volkmann, Claudia Sommer
Software Mentions: 1
Published: over 10 years ago
10.18632/aging.100927
N-acetyl-cysteine prevents age-related hearing loss and the progressive loss of inner hair cells in γ-glutamyl transferase 1 deficient mice
Cited by: 40
Author(s): Dalian Ding, Haiyan Jiang, Guang-Di Chen, Chantal M. Longo-Guess, Vijaya Prakash Krishnan Muthaiah, Cong Tian, Adam Sheppard, Richard Salvi, Kenneth R. Johnson
Software Mentions: 1
Published: over 8 years ago
10.3390/ani10101865
Long-Term Preservation of Testicular Tissue Integrity and Viability Using Vitrification in the Endangered Black-Footed Ferret (Mustela nigripes)
Cited by: 5
Author(s): David Baruc Cruvinel Lima, Lúcia Daniel Machado da Silva, Paul Marinari, Pierre Comizzoli
Software Mentions: 1
Published: about 4 years ago
10.1093/aob/mcu041
SNARE VTI13 plays a unique role in endosomal trafficking pathways associated with the vacuole and is essential for cell wall organization and root hair growth in arabidopsis
Cited by: 31
Author(s): Emily R. Larson, David S. Domozych, Mary L. Tierney
Software Mentions: 1
Published: over 10 years ago
10.1007/s00204-015-1637-z
A LUHMES 3D dopaminergic neuronal model for neurotoxicity testing allowing long-term exposure and cellular resilience analysis
Cited by: 68
Author(s): Lena Smirnova, Gregory Harris, Johannes Delp, Marize Campos Valadares, David Pamies, Helena T. Högberg, Tanja Waldmann, Marcel Leist, Thomas Hartung
Software Mentions: 1
Published: almost 9 years ago
10.36660/abc.20200420
Disautonomia: Uma Condição Esquecida – Parte 1
Cited by: 4
Author(s): Eduardo Arrais Rocha, Niraj Mehta, Maria Zildany Pinheiro Távora-Mehta, Camila F. Roncari, Alan Alves de Lima Cidrão, Jorge Elías
Software Mentions: 1
Published: over 3 years ago
10.1186/ar1989
Type IX collagen deficiency enhances the binding of cartilage-specific antibodies and arthritis severity
Cited by: 21
Author(s): Stefan Carlsén, Kutty Selva Nandakumar, Rikard Holmdahl
Software Mentions: 1
Published: almost 19 years ago
10.1186/s13075-017-1414-x
Biological function integrated prediction of severe radiographic progression in rheumatoid arthritis: a nested case control study
Cited by: 11
Author(s): Young Bin Joo, Yul Kim, Young-Ho Park, Kwang-Woo Kim, Jeong Ah Ryu, Seunghun Lee, So Young Bang, Hye Soon Lee, Gwan Su Yi, Sang Cheol Bae
Software Mentions: 1
Published: about 7 years ago
10.1186/ar2301
Microarray gene expression profiling of osteoarthritic bone suggests altered bone remodelling, WNT and transforming growth factor-β/bone morphogenic protein signalling
Cited by: 167
Author(s): Blair Hopwood, Anna Tsykin, David M. Findlay, Nicola L. Fazzalari
Software Mentions: 1
Published: almost 18 years ago
10.1186/1471-2091-8-29
Binding to DPF-motif by the POB1 EH domain is responsible for POB1-Eps15 interaction
Cited by: 18
Author(s): Elena Santonico, Simona Panni, Mattia Falconi, Luisa Castagnoli, Gianni Cesareni
Software Mentions: 1
Published: almost 18 years ago
10.1186/1471-2105-14-S1-S9
SNPranker 2.0: a gene-centric data mining tool for diseases associated SNP prioritization in GWAS
Cited by: 23
Author(s): Ivan Merelli, Andrea Calabria, Paolo Cozzi, Federica Viti, Ettore Mosca, Luciano Milanesi
Software Mentions: 1
Published: almost 12 years ago
10.1186/1741-7007-4-8
Nucleus accumbens corticotropin-releasing factor increases cue-triggered motivation for sucrose reward: paradoxical positive incentive effects in stress?
Cited by: 164
Author(s): Susana Peciña, Jay Schulkin, Kent Berridge
Software Mentions: 1
Published: over 18 years ago
10.1186/s12885-017-3426-y
Regulation of early growth response 2 expression by secreted frizzled related protein 1
Cited by: 13
Author(s): Kelly Gregory, Stéphanie Morin, Sallie S. Schneider
Software Mentions: 1
Published: over 7 years ago
10.1186/1471-2407-14-742
Axitinib and crizotinib combination therapy inhibits bone loss in a mouse model of castration resistant prostate cancer
Cited by: 16
Author(s): Jeetendra Eswaraka, Anand Giddabasappa, Guangzhou Han, Kush Lalwani, Koleen Eisele, Feng Zhao, Timothy Affolter, James G. Christensen, Gang Li
Software Mentions: 1
Published: about 10 years ago
10.1186/1471-2407-10-301
SNAI2/Slug promotes growth and invasion in human gliomas
Cited by: 130
Author(s): Hong Yang, Lata G. Menon, Peter McLaren Black, Rona S. Carroll, Mark D. Johnson
Software Mentions: 1
Published: over 14 years ago
10.1186/1471-2407-10-256
Immunophenotypic features of tumor infiltrating lymphocytes from mammary carcinomas in female dogs associated with prognostic factors and survival rates
Cited by: 81
Author(s): Alessandra Estrela‐Lima, Márcio Sobreira Silva Araújo, João Moreira da Costa-Neto, Andréa Teixeira-Carvalho, Stella Maria Barrouin‐Melo, Sérgio Vitorino Cardoso, Olindo Assis Martins‐Filho, Rogéria Serákides, Geovanni Dantas Cassali
Software Mentions: 1
Published: over 14 years ago
10.1186/1471-2121-7-32
The fission yeast DNA structure checkpoint protein Rad26ATRIP/LCD1/UVSD accumulates in the cytoplasm following microtubule destabilization
Cited by: 8
Author(s): Erin E. Baschal, Kuan J Chen, Lee G Elliott, Matthew Herring, Shawn C Verde, Tom D. Wolkow
Software Mentions: 1
Published: about 18 years ago
10.1186/1471-2121-9-40
Viscoelastic behaviour of human mesenchymal stem cells
Cited by: 83
Author(s): Samuel Chun Wei Tan, Wen X Pan, Gang Ma, Nian Cai, Kam W. Leong, Kin Liao
Software Mentions: 1
Published: over 16 years ago
10.1186/1471-2121-8-32
Ubiquitin conjugating enzymes participate in polyglutamine protein aggregation
Cited by: 18
Author(s): Rebecca A. Howard, Pratima Sharma, Connie Hajjar, Kim A. Caldwell, Rusla du Breuil, Rhonda Moore, Lynn Boyd
Software Mentions: 1
Published: over 17 years ago
10.1186/s12906-016-1473-6
Anti-inflammatory and burn injury wound healing properties of the shell of Haliotis diversicolor
Cited by: 21
Author(s): Zhi-Cheng Chen, Shing-Yi Sean Wu, Wei-Yang Su, Yuan-Chuan Lin, Yi-Hsin Lee, Wenbin Wu, Chunhong Chen, Zhi‐Hong Wen
Software Mentions: 1
Published: almost 8 years ago
10.1186/1471-213X-6-33
The Hlx homeobox transcription factor is required early in enteric nervous system development
Cited by: 25
Author(s): Michael D. Bates, Dana T Dunagan, Lynn C. Welch, Ajay Kaul, Richard P. Harvey
Software Mentions: 1
Published: over 18 years ago
10.1186/1471-213X-10-59
Copine A plays a role in the differentiation of stalk cells and the initiation of culmination in Dictyostelium development
Cited by: 5
Author(s): Tasha S. Smith, Jaimie M. Pineda, Alex C Donaghy, Cynthia Kay Damer
Software Mentions: 1
Published: over 14 years ago
10.1186/s12873-021-00496-2
Laypeople perception and interpretation of simulated life-threatening bleeding: a controlled experimental study
Cited by: 1
Author(s): Erik Prytz, Rachel R. Phillips, Susanna Lönnqvist, Marc Friberg, Carl‐Oscar Jonson
Software Mentions: 1
Published: about 3 years ago
10.1186/1471-2164-8-358
From transcriptome to biological function: environmental stress in an ectothermic vertebrate, the coral reef fish Pomacentrus moluccensis
Cited by: 61
Author(s): Karin S. Kassahn, Ross H. Crozier, Alister C. Ward, Graham N. Stone, M. Julian Caley
Software Mentions: 1
Published: almost 18 years ago
10.1186/1471-2164-9-363
Integrative analysis of RUNX1 downstream pathways and target genes
Cited by: 117
Author(s): Joëlle Michaud, Ken M. Simpson, Robert Escher, Karine Buchet-Poyau, Tim Beißbarth, Catherine Carmichael, Matthew E. Ritchie, Frédéric Schütz, Ping Cannon, Marjorie Liu, Xiaofeng Shen, Yoshiaki Ito, Wendy H. Raskind, Marshall S. Horwitz, Motomi Osato, David R. Turner, Terence P. Speed, Maria Kavallaris, Gordon K. Smyth, Hamish S. Scott
Software Mentions: 1
Published: over 16 years ago
10.1186/1471-2164-15-622
Systematic permutation testing in GWAS pathway analyses: identification of genetic networks in dilated cardiomyopathy and ulcerative colitis
Cited by: 24
Author(s): Christina Backes, Frank Rühle, Monika Stoll, Jan Haas, Karen Frese, André Franke, Wolfgang Lieb, Heinz‐Erich Wichmann, Tanja Weis, Wanda Kloos, Hans‐Peter Lenhof, Eckart Meese, Hugo A. Katus, Benjamin Meder, Andreas Keller
Software Mentions: 1
Published: over 10 years ago
10.1186/1471-2164-12-S5-S2
Changes in predicted protein disorder tendency may contribute to disease risk
Cited by: 13
Author(s): Yang Hu, Yunlong Liu, Jeesun Jung, A. Keith Dunker, Yadong Wang
Software Mentions: 1
Published: almost 13 years ago
10.1186/1471-2164-11-S5-S2
RNA interference-mediated knockdown of CD49e (α5 integrin chain) in human thymic epithelial cells modulates the expression of multiple genes and decreases thymocyte adhesion
Cited by: 25
Author(s): Leandra Linhares-Lacerda, Marcelo Ribeiro-Alves, Ana Cláudia Fernandes Nogueira, Daniella Arêas Mendes-da-Cruz, Danielle Aparecida Rosa de Magalhães, Mireille Dardenne, Geraldo A. S. Passos, Wilson Savino
Software Mentions: 1
Published: almost 14 years ago
10.1186/1471-2164-16-S13-S5
Obesity-related known and candidate SNP markers can significantly change affinity of TATA-binding protein for human gene promoters
Cited by: 22
Author(s): Olga Arkova, М. П. Пономаренко, Д. А. Рассказов, И. А. Драчкова, T. V. Arshinova, П. М. Пономаренко, Л. К. Савинкова, Н. А. Колчанов
Software Mentions: 1
Published: almost 9 years ago
10.1186/s12913-016-1256-2
The delivery of specialist spinal cord injury services in Queensland and the potential for telehealth
Cited by: 13
Author(s): Eileen van de Pol, Karen Lucas, Timothy Geraghty, Kiley Pershouse, Sandra Harding, Sridhar Atresh, Annemarie Wagemakers, Anthony C Smith
Software Mentions: 1
Published: almost 9 years ago
10.1186/s12865-019-0302-3
Lack of the hyaluronan receptor CD44 affects the course of bacterial otitis media and reduces leukocyte recruitment to the middle ear
Cited by: 9
Author(s): Hyun Woo Lim, Kwang Pak, Arwa Kurabi, Allen F. Ryan
Software Mentions: 1
Published: over 5 years ago
10.1186/1471-2334-13-513
Poor agreement between interferon-gamma release assays and the tuberculin skin test among HIV-infected individuals in the country of Georgia
Cited by: 23
Author(s): Nikoloz Chkhartishvili, Russell R. Kempker, Natia Dvali, L Abashidze, Lali Sharavdze, Pati Gabunia, Henry M. Blumberg, Carlos del Rı́o, Tengiz Tsertsvadze
Software Mentions: 1
Published: about 11 years ago
10.1186/1741-7015-5-18
Corticortophin releasing factor 2 receptor agonist treatment significantly slows disease progression in mdx mice
Cited by: 14
Author(s): Richard T. Hinkle, F.R. Lefever, Elizabeth Dolan, Deborah L Reichart, J Dietrich, Kathryn E. Gropp, Robert I. Thacker, Jeffrey P. DeMuth, Paula Stevens, Xiumei Qu, Alex Varbanov, Feng Wang, Robert J. Isfort
Software Mentions: 1
Published: over 17 years ago
10.1186/s12909-021-02920-4
Virtual reality-based neurological examination teaching tool(VRNET) versus standardized patient in teaching neurological examinations for the medical students: a randomized, single-blind study
Cited by: 14
Author(s): Sae Hwang Han, Young Dae Kim, Taeyoung Kong, J. Cho
Software Mentions: 1
Published: about 3 years ago
10.1186/s12874-017-0420-7
Pragmatic clinical trials embedded in healthcare systems: generalizable lessons from the NIH Collaboratory
Cited by: 118
Author(s): Kevin P. Weinfurt, Adrian F. Hernandez, Gloria D. Coronado, Lynn DeBar, Laura M. Dember, Beverly B. Green, Patrick J. Heagerty, Susan S. Huang, Kathryn James, Jeffrey G. Jarvik, Eric B. Larson, Vincent Mor, Richard Platt, Gary E. Rosenthal, Edward Septimus, Gregory E. Simon, Karen Staman, Jeremy Sugarman, Miguel A. Vázquez, Douglas Zatzick, Lesley H. Curtis
Software Mentions: 1
Published: about 7 years ago
10.1186/1471-2180-14-53
Development and antimicrobial susceptibility studies of in vitro monomicrobial and polymicrobial biofilm models with Aspergillus fumigatus and Pseudomonas aeruginosa
Cited by: 67
Author(s): Elias K. Manavathu, Dora Vager, José Antonio Vázquez
Software Mentions: 1
Published: over 10 years ago