Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: SPOT

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SPOT

Sequential Parameter Optimization Toolbox
31 versions
Latest release: over 2 years ago
4 dependent packages
616 downloads last month

Papers Mentioning SPOT 551

10.1186/ar2301
Microarray gene expression profiling of osteoarthritic bone suggests altered bone remodelling, WNT and transforming growth factor-β/bone morphogenic protein signalling
Cited by: 167
Author(s): Blair Hopwood, Anna Tsykin, David M. Findlay, Nicola L. Fazzalari
Software Mentions: 1
Published: almost 18 years ago
10.3390/ani10101865
Long-Term Preservation of Testicular Tissue Integrity and Viability Using Vitrification in the Endangered Black-Footed Ferret (Mustela nigripes)
Cited by: 5
Author(s): David Baruc Cruvinel Lima, Lúcia Daniel Machado da Silva, Paul Marinari, Pierre Comizzoli
Software Mentions: 1
Published: about 4 years ago
10.1186/1471-2229-5-7
Light-induced morphological alteration in anthocyanin-accumulating vacuoles of maize cells
Cited by: 62
Author(s): Niloufer G. Irani, Erich Grotewold
Software Mentions: 1
Published: over 19 years ago
10.1186/1476-4598-9-234
An ANOCEF genomic and transcriptomic microarray study of the response to radiotherapy or to alkylating first-line chemotherapy in glioblastoma patients
Cited by: 38
Author(s): François Ducray, Aurélien de Reyniès, Olivier Chinot, Ahmed Idbaïh, Dominique Figarella‐Branger, Carole Colin, Lucie Karayan‐Tapon, Hervé Chneiweiss, Michel Wager, François M. Vallette, Yannick Marie, David S. Rickman, Emilie Thomas, Jean‐Yves Delattre, Jérôme Honnorat, Marc Sanson, François Berger
Software Mentions: 1
Published: almost 15 years ago
10.1186/s12870-015-0670-7
A small multigene hydroxyproline-O-galactosyltransferase family functions in arabinogalactan-protein glycosylation, growth and development in Arabidopsis
Cited by: 63
Author(s): Debarati Basu, Lü Tian, Wuda Wang, Shauni Bobbs, Hayley Herock, Andrew Travers, Allan M. Showalter
Software Mentions: 1
Published: almost 9 years ago
10.1186/1471-2407-10-301
SNAI2/Slug promotes growth and invasion in human gliomas
Cited by: 130
Author(s): Hong Yang, Lata G. Menon, Peter McLaren Black, Rona S. Carroll, Mark D. Johnson
Software Mentions: 1
Published: over 14 years ago
10.1186/s12943-017-0740-6
Bi-directional exosome-driven intercommunication between the hepatic niche and cancer cells
Cited by: 52
Author(s): Nikolina Dioufa, Amanda M. Clark, Bo Ma, Colin H. Beckwitt, Alan Wells
Software Mentions: 1
Published: about 7 years ago
10.1186/1476-4598-11-20
Inhibition of HSP27 alone or in combination with pAKT inhibition as therapeutic approaches to target SPARC-induced glioma cell survival
Cited by: 35
Author(s): Chad R. Schultz, William Golembieski, Dan King, Stephen L. Brown, Chaya Brodie, Sandra A. Rempel
Software Mentions: 1
Published: over 12 years ago
10.3390/molecules24152713
The Effect of Chitosan Derivatives on the Compaction and Tension Generation of the Fibroblast-populated Collagen Matrix
Cited by: 3
Author(s): Khue Tu Doan, Pratiksha Kshetri, Natthapume Attamakulsri, Derek R. Newsome, Feifan Zhou, Cynthia K. Murray, Wei R. Chen, Gang Xu, Melville B. Vaughan
Software Mentions: 1
Published: over 5 years ago
10.3390/molecules26071895
Anti-Inflammatory Effect of Phytoncide in an Animal Model of Gastrointestinal Inflammation
Cited by: 3
Author(s): Azra Memon, Bae Yong Kim, Se-Eun Kim, Yuliya Pyao, Yeong‐Geun Lee, Se Chan Kang, Woon Kyu Lee
Software Mentions: 1
Published: over 3 years ago
10.3390/molecules25040863
CRANAD-28: A Robust Fluorescent Compound for Visualization of Amyloid Beta Plaques
Cited by: 9
Author(s): Kathleen Ran, Jing Yang, Anil V. Nair, Biyue Zhu, Chongzhao Ran
Software Mentions: 1
Published: almost 5 years ago
10.1016/j.molmet.2017.06.002
Serotonergic modulation of the activity of GLP-1 producing neurons in the nucleus of the solitary tract in mouse
Cited by: 22
Author(s): Marie K. Holt, Ida J. Llewellyn‐Smith, Frank Reimann, Fiona M. Gribble, Stefan Trapp
Software Mentions: 1
Published: over 7 years ago
10.1186/1471-2202-10-128
Chondroitin sulfate proteoglycans regulate the growth, differentiation and migration of multipotent neural precursor cells through the integrin signaling pathway
Cited by: 71
Author(s): Wen Li Gu, Sai-Li Fu, Yan Xia Wang, Ying Liu, He Zuo Lü, Xiao–Ming Xu, Pei-Hua Lu
Software Mentions: 1
Published: about 15 years ago
10.1186/s13024-021-00454-3
Oligomerization of Lrrk controls actin severing and α-synuclein neurotoxicity in vivo
Cited by: 4
Author(s): Satyapriya Sarkar, Farah H. Bardai, Abby L. Olsen, Kelly M. Lohr, Yingyi Zhang, Mel Β. Feany
Software Mentions: 1
Published: over 3 years ago
10.1186/1744-8069-6-40
Long Lasting Pain Hypersensitivity following Ligation of the Tendon of the Masseter Muscle in Rats: A Model of Myogenic Orofacial Pain
Cited by: 42
Author(s): Wei Guo, Hu Wang, Shiping Zou, Wei Feng, Ronald Dubner, Ke Ren
Software Mentions: 1
Published: almost 15 years ago
10.1186/s40462-020-00237-3
Drivers of realized satellite tracking duration in marine turtles
Cited by: 17
Author(s): Kristen M. Hart, Jacquelyn C. Guzy, Brian J. Smith
Software Mentions: 1
Published: almost 4 years ago
10.1186/1476-4598-10-69
A chalcone-related small molecule that induces methuosis, a novel form of non-apoptotic cell death, in glioblastoma cells
Cited by: 128
Author(s): Jean H. Overmeyer, Ashley Young, Haymanti Bhanot, William A. Maltese
Software Mentions: 1
Published: over 13 years ago
10.1186/1476-4598-10-24
Differential contributory roles of nucleotide excision and homologous recombination repair for enhancing cisplatin sensitivity in human ovarian cancer cells
Cited by: 52
Author(s): Qi-En Wang, Keisha Milum, Chunhua Han, Yi‐Wen Huang, Gulzar Wani, Jürgen Thomale, Altaf A. Wani
Software Mentions: 1
Published: almost 14 years ago
10.1186/2045-824X-3-10
A deficiency of uPAR alters endothelial angiogenic function and cell morphology
Cited by: 18
Author(s): Rashna D. Balsara, Reid W. Merryman, Farhaad Virjee, Claire Northway, Francis J. Castellino, Victoria A. Ploplis
Software Mentions: 1
Published: almost 14 years ago
10.1186/1297-9716-42-37
NKp46 defines ovine cells that have characteristics corresponding to NK cells
Cited by: 35
Author(s): Timothy Connelley, Anne K. Storset, Alan D. Pemberton, Niall D. MacHugh, Jeremy K. Brown, Hege Lund, Ivan Morrison
Software Mentions: 1
Published: almost 14 years ago
10.1186/1297-9716-44-109
Characterization of NCR1+ cells residing in lymphoid tissues in the gut of lambs indicates that the majority are NK cells
Cited by: 4
Author(s): Line Olsen, Preben Boysen, Caroline Piercey Åkesson, Gjermund Gunnes, Timothy Connelley, Anne K. Storset, Arild Espenes
Software Mentions: 1
Published: almost 12 years ago
10.1186/s13567-014-0136-1
The early intestinal immune response in experimental neonatal ovine cryptosporidiosis is characterized by an increased frequency of perforin expressing NCR1+ NK cells and by NCR1− CD8+ cell recruitment
Cited by: 16
Author(s): Line Olsen, Caroline Piercey Åkesson, Anne K. Storset, Sonia Lacroix‐Lamandé, Preben Boysen, Coralie Metton, Timothy Connelley, Arild Espenes, Fabrice Laurent, Françoise Drouet
Software Mentions: 1
Published: almost 10 years ago
10.1186/1471-2407-14-742
Axitinib and crizotinib combination therapy inhibits bone loss in a mouse model of castration resistant prostate cancer
Cited by: 16
Author(s): Jeetendra Eswaraka, Anand Giddabasappa, Guangzhou Han, Kush Lalwani, Koleen Eisele, Feng Zhao, Timothy Affolter, James G. Christensen, Gang Li
Software Mentions: 1
Published: about 10 years ago
10.3390/v11060493
Species-Specific Conservation of Linear Antigenic Sites on Vaccinia Virus A27 Protein Homologs of Orthopoxviruses
Cited by: 3
Author(s): Henrike P. Ahsendorf, Li Gan, Kamal H. Eltom, Ahmed Abd El Wahed, Sven-Kevin Hotop, Rachel L. Roper, Ulrike Beutling, Mark Bröenstrup, Christiane Stahl–Hennig∥, Ludwig E. Hoelzle, Claus-Peter Czerny
Software Mentions: 1
Published: over 5 years ago
10.3897/zookeys.459.7850
Molecular and morphological differentiation between Aphis gossypii Glover (Hemiptera, Aphididae) and related species, with particular reference to the North American Midwest
Cited by: 8
Author(s): Doris Lagos‐Kutz, Colin Favret, Rosanna Giordano, David J. Voegtlin
Software Mentions: 1
Published: almost 10 years ago
10.1186/s13071-018-3270-1
Silencing expression of the Rhipicephalus microplus vitellogenin receptor gene blocks Babesia bovis transmission and interferes with oocyte maturation
Cited by: 16
Author(s): Hala E. Hussein, Wendell C. Johnson, Naomi S. Taus, Carlos E. Suárez, Glen A. Scoles, Massaro W. Ueti
Software Mentions: 1
Published: almost 6 years ago
10.1186/s13075-017-1414-x
Biological function integrated prediction of severe radiographic progression in rheumatoid arthritis: a nested case control study
Cited by: 11
Author(s): Young Bin Joo, Yul Kim, Young-Ho Park, Kwang-Woo Kim, Jeong Ah Ryu, Seunghun Lee, So Young Bang, Hye Soon Lee, Gwan Su Yi, Sang Cheol Bae
Software Mentions: 1
Published: about 7 years ago
10.1186/s13041-016-0268-5
PERK regulates Gq protein-coupled intracellular Ca2+ dynamics in primary cortical neurons
Cited by: 15
Author(s): Siying Zhu, Barbara C. McGrath, Y. Bai, Xin Tang, Douglas R. Cavener
Software Mentions: 1
Published: about 8 years ago
10.1186/1471-2180-14-53
Development and antimicrobial susceptibility studies of in vitro monomicrobial and polymicrobial biofilm models with Aspergillus fumigatus and Pseudomonas aeruginosa
Cited by: 67
Author(s): Elias K. Manavathu, Dora Vager, José Antonio Vázquez
Software Mentions: 1
Published: over 10 years ago
10.1186/s13100-019-0146-7
Features of a novel protein, rusticalin, from the ascidian Styela rustica reveal ancestral horizontal gene transfer event
Cited by: 2
Author(s): M. A. Daugavet, Sergey Shabelnikov, A. N. Shumeev, Tatiana Shaposhnikova, Leonid S. Adonin, O. I. Podgornaya
Software Mentions: 1
Published: almost 6 years ago
10.1038/micronano.2017.15
A 3D-printed platform for modular neuromuscular motor units
Cited by: 55
Author(s): Caroline Cvetkovic, Max H. Rich, Ritu Raman, Hyunjoon Kong, Rashid Bashir
Software Mentions: 1
Published: over 7 years ago
10.1186/s12874-017-0420-7
Pragmatic clinical trials embedded in healthcare systems: generalizable lessons from the NIH Collaboratory
Cited by: 118
Author(s): Kevin P. Weinfurt, Adrian F. Hernandez, Gloria D. Coronado, Lynn DeBar, Laura M. Dember, Beverly B. Green, Patrick J. Heagerty, Susan S. Huang, Kathryn James, Jeffrey G. Jarvik, Eric B. Larson, Vincent Mor, Richard Platt, Gary E. Rosenthal, Edward Septimus, Gregory E. Simon, Karen Staman, Jeremy Sugarman, Miguel A. Vázquez, Douglas Zatzick, Lesley H. Curtis
Software Mentions: 1
Published: about 7 years ago
10.1186/s12885-017-3426-y
Regulation of early growth response 2 expression by secreted frizzled related protein 1
Cited by: 13
Author(s): Kelly Gregory, Stéphanie Morin, Sallie S. Schneider
Software Mentions: 1
Published: over 7 years ago
10.1038/s41378-021-00287-6
Leakage pressures for gasketless superhydrophobic fluid interconnects for modular lab-on-a-chip systems
Cited by: 3
Author(s): Christopher Brown, Xiaoxiao Zhao, Taehyun Park, Pin-Chuan Chen, Byoung Hee You, Daniel Park, Steven A. Soper, Alison E. Baird, Michael C. Murphy
Software Mentions: 1
Published: about 3 years ago
10.3390/mi10030180
Development and Validation of a Smartphone-Based Near-Infrared Optical Imaging Device to Measure Physiological Changes In-Vivo
Cited by: 12
Author(s): Kacie Kaile, Anuradha Godavarty
Software Mentions: 1
Published: over 5 years ago
10.1186/s12909-021-02920-4
Virtual reality-based neurological examination teaching tool(VRNET) versus standardized patient in teaching neurological examinations for the medical students: a randomized, single-blind study
Cited by: 14
Author(s): Sae Hwang Han, Young Dae Kim, Taeyoung Kong, J. Cho
Software Mentions: 1
Published: about 3 years ago
10.1111/1751-7915.13407
<i>Lactobacillus casei</i> expressing Internalins A and B reduces <i>Listeria monocytogenes</i> interaction with Caco‐2 cells <i>in vitro</i>
Cited by: 13
Author(s): Moloko Gloria Mathipa, Mapitsi Silvester Thantsha, Arun K. Bhunia
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0125624
Two Hydroxyproline Galactosyltransferases, GALT5 and GALT2, Function in Arabinogalactan-Protein Glycosylation, Growth and Development in Arabidopsis
Cited by: 61
Author(s): Debarati Basu, Wuda Wang, Sheng Ma, Taylor DeBrosse, Emily Poirier, Kirk Emch, Eric Soukup, Lü Tian, Allan M. Showalter
Software Mentions: 1
Published: over 9 years ago
10.3390/microarrays4030370
SPOTing Acetyl-Lysine Dependent Interactions
Cited by: 12
Author(s): S. Picaud, P. Filippakopoulos
Software Mentions: 1
Published: over 9 years ago
10.1186/1741-7015-5-18
Corticortophin releasing factor 2 receptor agonist treatment significantly slows disease progression in mdx mice
Cited by: 14
Author(s): Richard T. Hinkle, F.R. Lefever, Elizabeth Dolan, Deborah L Reichart, J Dietrich, Kathryn E. Gropp, Robert I. Thacker, Jeffrey P. DeMuth, Paula Stevens, Xiumei Qu, Alex Varbanov, Feng Wang, Robert J. Isfort
Software Mentions: 1
Published: over 17 years ago
10.1186/1741-7007-4-8
Nucleus accumbens corticotropin-releasing factor increases cue-triggered motivation for sucrose reward: paradoxical positive incentive effects in stress?
Cited by: 164
Author(s): Susana Peciña, Jay Schulkin, Kent Berridge
Software Mentions: 1
Published: over 18 years ago
10.1186/ar1989
Type IX collagen deficiency enhances the binding of cartilage-specific antibodies and arthritis severity
Cited by: 21
Author(s): Stefan Carlsén, Kutty Selva Nandakumar, Rikard Holmdahl
Software Mentions: 1
Published: almost 19 years ago
10.1007/s00401-014-1284-0
Cutaneous neuropathy in Parkinson’s disease: a window into brain pathology
Cited by: 189
Author(s): Kathrin Doppler, Sönke Ebert, Nurcan Üçeyler, Claudia Trenkwalder, Jens Ebentheuer, Jens Volkmann, Claudia Sommer
Software Mentions: 1
Published: over 10 years ago
10.1016/j.mex.2021.101462
Concurrent sampling of transitional and coastal waters by Diffusive Gradient in Thin-films (DGT) and spot sampling for trace metals analysis
Cited by: 7
Author(s): Philippe Bersuder, Isabelle Amouroux, María Jesús Belzunce-Segarra, Thi Bolam, Miguel Caetano, Inês Carvalho, Margarida M. Correia dos Santos, Gary R. Fones, Jean-Louis Gonzalez, Stephane Guesdon, Joana Larreta, Barbara Marras, Brendan McHugh, Florence Menet-Nédélec, Iratxe Menchaca, Vanessa Millán Gabet, Natalia Montero, Martin Nolan, Fiona Regan, Craig D. Robinson, Nuno Rosa, Marta Rodrigo Sanz, José Germán Rodríguez, Marco Schintu, Blánaid White, Hao Zhang
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0047934
Dopaminergic Modulation of Effort-Related Choice Behavior as Assessed by a Progressive Ratio Chow Feeding Choice Task: Pharmacological Studies and the Role of Individual Differences
Cited by: 163
Author(s): Patrick A. Randall, Marta Pardo, Eric J. Nunes, Laura López de la Cruz, V. Kiran Vemuri, A. Makriyannis, Younis Baqi, Christian Müller, Mercè Correa, John D. Salamone
Software Mentions: 1
Published: about 12 years ago
10.1155/2020/5919150
Enhanced Wound Healing- and Inflammasome-Associated Gene Expression in TNFAIP3-Interacting Protein 1- (TNIP1-) Deficient HaCaT Keratinocytes Parallels Reduced Reepithelialization
Cited by: 7
Author(s): Rambon Shamilov, Tyler W Ackley, Brian J. Aneskievich
Software Mentions: 1
Published: over 4 years ago
10.1186/s40902-019-0231-3
Improvement of biohistological response of facial implant materials by tantalum surface treatment
Cited by: 3
Author(s): Mohammed Mousa H. Bakri, Sung Ho Lee, Jong Ho Lee
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0170512
Protease-Activated Receptor-1 Supports Locomotor Recovery by Biased Agonist Activated Protein C after Contusive Spinal Cord Injury
Cited by: 12
Author(s): William D. Whetstone, Breset A. Walker, Alpa Trivedi, Sangmi Lee, Linda J. Noble-Haeusslein, Jung Yu C. Hsu
Software Mentions: 1
Published: almost 8 years ago
10.1186/s40902-020-00280-5
Influence of biodegradable polymer membrane on new bone formation and biodegradation of biphasic bone substitutes: an animal mandibular defect model study
Cited by: 8
Author(s): Jeong-Kui Ku, Young-Kyun Kim, Pil‐Young Yun
Software Mentions: 1
Published: about 4 years ago
10.1186/1471-2334-13-513
Poor agreement between interferon-gamma release assays and the tuberculin skin test among HIV-infected individuals in the country of Georgia
Cited by: 23
Author(s): Nikoloz Chkhartishvili, Russell R. Kempker, Natia Dvali, L Abashidze, Lali Sharavdze, Pati Gabunia, Henry M. Blumberg, Carlos del Rı́o, Tengiz Tsertsvadze
Software Mentions: 1
Published: about 11 years ago
10.1186/s40902-019-0234-0
Effect of bFGF and fibroblasts combined with hyaluronic acid-based hydrogels on soft tissue augmentation: an experimental study in rats
Cited by: 5
Author(s): Su Yeon Lee, Yongdoo Park, Soon Jung Hwang
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0019257
Functional KV10.1 Channels Localize to the Inner Nuclear Membrane
Cited by: 54
Author(s): Ye Chen, Araceli Sánchez, María E. Rubio, Tobias Kohl, Luis A. Pardo, Walter Stühmer
Software Mentions: 1
Published: over 13 years ago
10.3390/ma14164405
Bone Response to Conventional Titanium Implants and New Zirconia Implants Produced by Additive Manufacturing
Cited by: 6
Author(s): Jin-Cheol Kim, In‐Sung Yeo
Software Mentions: 1
Published: over 3 years ago
10.3390/ma8052523
A Novel Porcine Graft for Regeneration of Bone Defects
Cited by: 12
Author(s): Eisner Salamanca, Wei Fang Lee, Chin Yi Lin, Haw Ming Huang, Che Tong Lin, Sheng-Wei Feng, Wei Jen Chang
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0054205
Pyocyanin-Enhanced Neutrophil Extracellular Trap Formation Requires the NADPH Oxidase
Cited by: 98
Author(s): Balázs Rada, Meghan A. Jendrysik, Lan Pang, Craig Hayes, Dae Goon Yoo, Jonathan J. Park, Samuel M. Moskowitz, Harry L. Malech, Thomas L. Leto
Software Mentions: 1
Published: almost 12 years ago
10.3390/ma11050714
Histological Evaluation of the Healing Process of Various Bone Graft Materials after Engraftment into the Human Body
Cited by: 19
Author(s): Sang Hyun Jo, Young Kyun Kim, Yong-Hoon Choi
Software Mentions: 1
Published: over 6 years ago
10.1186/s12865-019-0302-3
Lack of the hyaluronan receptor CD44 affects the course of bacterial otitis media and reduces leukocyte recruitment to the middle ear
Cited by: 9
Author(s): Hyun Woo Lim, Kwang Pak, Arwa Kurabi, Allen F. Ryan
Software Mentions: 1
Published: over 5 years ago
10.1186/s12913-016-1256-2
The delivery of specialist spinal cord injury services in Queensland and the potential for telehealth
Cited by: 13
Author(s): Eileen van de Pol, Karen Lucas, Timothy Geraghty, Kiley Pershouse, Sandra Harding, Sridhar Atresh, Annemarie Wagemakers, Anthony C Smith
Software Mentions: 1
Published: almost 9 years ago
10.3390/ma10091049
Evaluation of the Healing Potential of Demineralized Dentin Matrix Fixed with Recombinant Human Bone Morphogenetic Protein-2 in Bone Grafts
Cited by: 43
Author(s): Sang-Yun Kim, Young-Kyun Kim, Yeoung-Hyun Park, Joo-Cheol Park, Jeong-Kui Ku, In-Woong Um, Jiyun Kim
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0066078
Real Time Measures of Prestin Charge and Fluorescence during Plasma Membrane Trafficking Reveal Sub-Tetrameric Activity
Cited by: 13
Author(s): Shumin Bian, Dhasakumar Navaratnam, Joseph Santos‐Sacchi
Software Mentions: 1
Published: over 11 years ago
10.3390/ma12203400
A Vitronectin-Derived Bioactive Peptide Improves Bone Healing Capacity of SLA Titanium Surfaces
Cited by: 15
Author(s): Chang-Bin Cho, Sung Youn Jung, Cho Yeon Park, Hyun Kang, I. Yeo, Byung‐Moo Min
Software Mentions: 1
Published: about 5 years ago
10.3390/ma4101805
Fabrication of κ-Carrageenan Fibers by Wet Spinning: Spinning Parameters
Cited by: 17
Author(s): Lingyan Kong, Gregory R. Ziegler
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0179197
Origin of mounds in the Pantanal wetlands: An integrated approach between geomorphology, pedogenesis, ecology and soil micromorphology
Cited by: 6
Author(s): Jairo Calderari de Oliveira, Raphael Moreira Beirigo, Mariane Chiapini, Alexandre Ferreira do Nascimento, Eduardo Guimarães Couto, Pablo Vidal‐Torrado
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0224221
Linalool acts as a fast and reversible anesthetic in Hydra
Cited by: 14
Author(s): Tapan Goel, Rui Wang, Sara De Martin, Elizabeth Lanphear, Eva‐Maria S. Collins
Software Mentions: 1
Published: about 5 years ago
10.3390/ma12132078
The Effect of Ultraviolet Photofunctionalization on a Titanium Dental Implant with Machined Surface: An In Vitro and In Vivo Study
Cited by: 27
Author(s): Junbeom Lee, Ye-Hyeon Jo, Jung-Yoo Choi, Yang‐Jo Seol, Yong-Moo Lee, Young Ku, In‐Chul Rhyu, I. Yeo
Software Mentions: 1
Published: over 5 years ago
10.1186/1471-2164-16-S13-S5
Obesity-related known and candidate SNP markers can significantly change affinity of TATA-binding protein for human gene promoters
Cited by: 22
Author(s): Olga Arkova, М. П. Пономаренко, Д. А. Рассказов, И. А. Драчкова, T. V. Arshinova, П. М. Пономаренко, Л. К. Савинкова, Н. А. Колчанов
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0016102
Exopolysaccharide-Independent Social Motility of Myxococcus xanthus
Cited by: 24
Author(s): Wei Hu, Muhaiminu Hossain, Renate Lux, Jing Wang, Zhe Yang, Yue‐zhong Li, Wenyuan Shi
Software Mentions: 1
Published: almost 14 years ago
10.1371/journal.pone.0165964
Bifunctional Anti-Non-Amyloid Component α-Synuclein Nanobodies Are Protective In Situ
Cited by: 44
Author(s): David Butler, Shubhada N. Joshi, Erwin De Genst, Ankit S. Baghel, Christopher M. Dobson, Anne Messer
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0066790
Identification of the Transcription Factor Znc1p, which Regulates the Yeast-to-Hypha Transition in the Dimorphic Yeast Yarrowia lipolytica
Cited by: 20
Author(s): Azul Martínez-Vázquez, Angélica González-Hernández, Ángel Domínguez, Richard A. Rachubinski, Meritxell Riquelme, Patricia Cuéllar-Mata, Juan Carlos Torres Guzmán
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0061394
Ecrg4 Attenuates the Inflammatory Proliferative Response of Mucosal Epithelial Cells to Infection
Cited by: 33
Author(s): Arwa Kurabi, Kwang Pak, Xitong Dang, Raúl Coimbra, Brian P. Eliceiri, Allen F. Ryan, Andrew Baird
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0059609
Abnormal Apoptosis of Trophoblastic Cells Is Related to the Up-Regulation of CYP11A Gene in Placenta of Preeclampsia Patients
Cited by: 35
Author(s): Guolin He, Wei Xu, Yan Chen, Xinghui Liu, Mingrong Xi
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0149724
A Stable Thoracic Hox Code and Epimorphosis Characterize Posterior Regeneration in Capitella teleta
Cited by: 31
Author(s): Daniëlle de Jong, Elaine C. Seaver
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0127239
NF-κB p65 Subunit Is Modulated by Latent Transforming Growth Factor-β Binding Protein 2 (LTBP2) in Nasopharyngeal Carcinoma HONE1 and HK1 Cells
Cited by: 29
Author(s): Rebecca Kan, Timothy Wai Ho Shuen, Hong Lok Lung, Arthur Kwok Leung Cheung, Wei Dai, Dora Lai Wan Kwong, Wai Tong Ng, Anne W.M. Lee, Chun Chung Yau, Roger K.C. Ngan, Stewart Y. Tung, Maria Li Lung
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0105269
Local and Systemic Cytokine Expression in Patients with Postherpetic Neuralgia
Cited by: 13
Author(s): Nurcan Üçeyler, M. Valet, Waldemar Kafke, Thomas R. Tölle, Claudia Sommer
Software Mentions: 1
Published: over 10 years ago
10.3390/ma10121347
Enhancement of Osteoblastic-Like Cell Activity by Glow Discharge Plasma Surface Modified Hydroxyapatite/β-Tricalcium Phosphate Bone Substitute
Cited by: 14
Author(s): Eisner Salamanca, Yu Pan, Aileen I. Tsai, Pei Lin, Ching Kai Lin, Haw Ming Huang, Nai Chia Teng, Peter D. Wang, Wei Jen Chang
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0010565
A Male with Unilateral Microphthalmia Reveals a Role for TMX3 in Eye Development
Cited by: 33
Author(s): Ryan Chao, Linda M Nevin, Pooja Agarwal, Jan Riemer, Xiaoxia Bai, Allen Delaney, Matthew Akana, Nelson JimenezLopez, Tanya Bardakjian, Adele Schneider, Nicolas Chassaing, Daniel F. Schorderet, David R. FitzPatrick, Pui‐Yan Kwok, Lars Ellgaard, Douglas B. Gould, Yan Zhang, Jarema Malicki, Herwig Baier, Anne Slavotinek
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.pone.0157409
Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8
Cited by: 43
Author(s): Cinque Soto, Gilad Ofek, Michael Joyce, Baoshan Zhang, Krisha McKee, Nancy S. Longo, Yongping Yang, Jinghe Huang, Robert Parks, Joshua Eudailey, Krissey E. Lloyd, S. Munir Alam, Barton F. Haynes, Nisc Comparative Sequencing Program, James C. Mullikin, Mark Connors, John R. Mascola, Lawrence Shapiro, Peter D. Kwong
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0217065
Protective effects of urocortin 2 against caerulein-induced acute pancreatitis
Cited by: 5
Author(s): Jingzhen Yuan, Burcu Hasdemir, Tanya Tan, Chintan Chheda, Jean Rivier, Stephen J. Pandol, Aditi Bhargava
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0034082
Increased Fibrosis and Interstitial Fluid Pressure in Two Different Types of Syngeneic Murine Carcinoma Grown in Integrin β3-Subunit Deficient Mice
Cited by: 12
Author(s): Tomas Friman, Ronny Gustafsson, Linda Elin Birkhaug Stuhr, Jean Chidiac, Nils‐Erik Heldin, Rolf K. Reed, Åke Oldberg, Kristofer Rubin
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0045462
Activating Mutations in β-Catenin in Colon Cancer Cells Alter Their Interaction with Macrophages; the Role of Snail
Cited by: 42
Author(s): Pawan Kaler, Leonard H. Augenlicht, Lidija Klampfer
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0179822
Carbonic anhydrase inhibitor attenuates ischemia-reperfusion induced acute lung injury
Cited by: 11
Author(s): Lan Cui, Chung-Kan Peng, Shou-Hung Tang, Kunlun Huang, Chin-Pyng Wu
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0029990
Rod and Cone Pathway Signalling Is Altered in the P2X7 Receptor Knock Out Mouse
Cited by: 60
Author(s): Kirstan A. Vessey, Erica L. Fletcher
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0008461
A Gene Expression Signature of Invasive Potential in Metastatic Melanoma Cells
Cited by: 75
Author(s): Aaron Jeffs, Amy Glover, Lynn Slobbe, Li Wang, Shan He, Jody Hazlett, A. Awasthi, Adele G. Woolley, Elaine S. Marshall, Wayne R. Joseph, Cristin G. Print, Bruce C. Baguley, Michael R. Eccles
Software Mentions: 1
Published: almost 15 years ago
10.1038/s41375-018-0368-6
Sequentially inducible mouse models reveal that Npm1 mutation causes malignant transformation of Dnmt3a-mutant clonal hematopoiesis
Cited by: 67
Author(s): Matthew A. Loberg, Rebecca Bell, Leslie O. Goodwin, Elizabeth Eudy, Linde A. Miles, Jennifer M. SanMiguel, Kira Young, David E. Bergstrom, Ross L. Levine, Rebekka K. Schneider, Jennifer J. Trowbridge
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0218480
Asymmetric seasonal daytime and nighttime warming and its effects on vegetation in the Loess Plateau
Cited by: 5
Author(s): Liqun Ma, Fen Qin, Hao Wang, Yaochen Qin, Haoming Xia
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0061669
An Anti-Phospholipase A2 Receptor Quantitative Immunoassay and Epitope Analysis in Membranous Nephropathy Reveals Different Antigenic Domains of the Receptor
Cited by: 40
Author(s): Astrid Behnert, Marvin J. Fritzler, Beina Teng, Meifeng Zhang, Frank Bollig, Hermann Haller, Andrej Škoberne, Michael Mähler, Mario Schiffer
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0129229
Evolution of the SH3 Domain Specificity Landscape in Yeasts
Cited by: 7
Author(s): Erik Verschueren, Matthias Spiess, Areti Gkourtsa, Teja Avula, Christiane Landgraf, Victor Tapia Mancilla, Aline Huber, Rudolf Volkmer, Barbara Winsor, Luís Serrano, Frans Hochstenbach, Ben Distel
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0211399
Why does the zebrafish cloche mutant develop lens cataract?
Cited by: 8
Author(s): Mason Posner, Matthew McDonald, Kelly L. Murray, Andor J. Kiss
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0057022
The Identification of Pathway Markers in Intracranial Aneurysm Using Genome-Wide Association Data from Two Different Populations
Cited by: 13
Author(s): Burcu Bakir-Gungor, Uğur Sezerman
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0112092
A Drosophila Toolkit for the Visualization and Quantification of Viral Replication Launched from Transgenic Genomes
Cited by: 3
Author(s): Mathias F. Wernet, Martha Klovstad, Thomas R. Clandinin
Software Mentions: 1
Published: about 10 years ago
10.1002/cam4.1635
A new niclosamide derivatives-B17 can inhibit urological cancers growth through apoptosis-related pathway
Cited by: 4
Author(s): Ching-Tang Wu, Chun-Liang Chen, Hsu-Shan Huang, Dah‐Shyong Yü
Software Mentions: 1
Published: over 6 years ago
10.1186/1471-2164-11-S5-S2
RNA interference-mediated knockdown of CD49e (α5 integrin chain) in human thymic epithelial cells modulates the expression of multiple genes and decreases thymocyte adhesion
Cited by: 25
Author(s): Leandra Linhares-Lacerda, Marcelo Ribeiro-Alves, Ana Cláudia Fernandes Nogueira, Daniella Arêas Mendes-da-Cruz, Danielle Aparecida Rosa de Magalhães, Mireille Dardenne, Geraldo A. S. Passos, Wilson Savino
Software Mentions: 1
Published: almost 14 years ago
10.1371/journal.pone.0089310
Regulation of Sox6 by Cyclin Dependent Kinase 5 in Brain
Cited by: 9
Author(s): Parvathi Rudrabhatla, Elías Utreras, Howard Jaffe, Ashok B. Kulkarni
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0130454
Moderate Exercise Mitigates the Detrimental Effects of Aging on Tendon Stem Cells
Cited by: 49
Author(s): Jianying Zhang, James H.‐C. Wang
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0121281
CoREST1 Promotes Tumor Formation and Tumor Stroma Interactions in a Mouse Model of Breast Cancer
Cited by: 7
Author(s): Sohini Mazumdar, Lisa M. Arendt, Sarah Phillips, Maja Sedic, Charlotte Kuperwasser, Grace Gill
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0187994
Structural analysis of human glycoprotein butyrylcholinesterase using atomistic molecular dynamics: The importance of glycosylation site ASN241
Cited by: 14
Author(s): Austen Bernardi, Karl N. Kirschner, Roland Faller
Software Mentions: 1
Published: almost 7 years ago
10.1186/1471-2164-12-S5-S2
Changes in predicted protein disorder tendency may contribute to disease risk
Cited by: 13
Author(s): Yang Hu, Yunlong Liu, Jeesun Jung, A. Keith Dunker, Yadong Wang
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0216603
Lipophilic statins inhibit YAP nuclear localization, co-activator activity and colony formation in pancreatic cancer cells and prevent the initial stages of pancreatic ductal adenocarcinoma in KrasG12D mice
Cited by: 33
Author(s): Fang Hao, Qinhong Xu, Jing Wang, Shuo Yu, Hui-Hua Chang, James Sinnett‐Smith, Guido Eibl, Enrique Rozengurt
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0198891
Comparative transcriptome profiling of Blumeria graminis f. sp. tritici during compatible and incompatible interactions with sister wheat lines carrying and lacking Pm40
Cited by: 14
Author(s): Yuting Hu, Yinping Liang, Min Zhang, Feiquan Tan, Shengyi Zhong, Xin Li, Guoshu Gong, Xiaoli Chang, Jing Shang, Shengwen Tang, Tao Li, Peigao Luo
Software Mentions: 1
Published: over 6 years ago
10.36660/abc.20200420
Disautonomia: Uma Condição Esquecida – Parte 1
Cited by: 4
Author(s): Eduardo Arrais Rocha, Niraj Mehta, Maria Zildany Pinheiro Távora-Mehta, Camila F. Roncari, Alan Alves de Lima Cidrão, Jorge Elías
Software Mentions: 1
Published: over 3 years ago