Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: SPECIES

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SPECIES

Statistical Package for Species Richness Estimation
3 versions
Latest release: over 1 year ago
1 dependent package
390 downloads last month

Papers Mentioning SPECIES 25

10.3389/fmicb.2020.577474
Dietary Emulsifiers Alter Composition and Activity of the Human Gut Microbiota in vitro, Irrespective of Chemical or Natural Emulsifier Origin
Cited by: 25
Author(s): Lisa Miclotte, Kim De Paepe, Leen Rymenans, Chris Callewaert, Jeroen Raes, Andreja Rajković, John Van Camp, Tom Van de Wiele
Software Mentions: 7
Published: about 4 years ago
10.7717/peerj.6247
Diversity, spatial distribution and activity of fungi in freshwater ecosystems
Cited by: 30
Author(s): Cécile Lepère, Isabelle Domaizon, Jean‐François Humbert, Ludwig Jardillier, Mylène Hugoni, Didier Debroas
Software Mentions: 4
Published: almost 6 years ago
10.1038/s41598-020-73879-3
Using a Bayesian modelling approach (INLA-SPDE) to predict the occurrence of the Spinetail Devil Ray (Mobular mobular)
Cited by: 17
Author(s): Nerea Lezama-Ochoa, María Grazia Pennino, Martín Hall, Jon López, Hilário Murua
Software Mentions: 3
Published: about 4 years ago
10.1093/database/baw111
NTTMUNSW BioC modules for recognizing and normalizing species and gene/protein mentions
Cited by: 4
Author(s): Hong Jie Dai, Onkar Singh, Jitendra Jonnagaddala, Emily Chia Yu Su
Software Mentions: 2
Published: almost 9 years ago
10.1002/ece3.5509
An effective method for ecosystem‐scale manipulation of bird abundance and species richness
Cited by: 7
Author(s): Chelsea L. Wood, Margaret Summerside, Pieter T. J. Johnson
Software Mentions: 2
Published: over 5 years ago
10.1093/database/baw005
EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation
Cited by: 39
Author(s): Evangelos Pafilis, Pier Luigi Buttigieg, Barbra D. Ferrell, Emiliano Pereira, Julia Schnetzer, Christos Arvanitidis, Lars Juhl Jensen
Software Mentions: 2
Published: almost 9 years ago
10.1107/S1600577520000843
Understanding the mechanical limitations of the performance of soft X-ray monochromators at MAX IV laboratory
Cited by: 3
Author(s): Peter Sjöblom, Gabriela Todorescu, Samuli Urpelainen
Software Mentions: 2
Published: almost 5 years ago
10.3897/BDJ.7.e29626
COPIOUS: A gold standard corpus of named entities towards extracting species occurrence from biodiversity literature
Cited by: 15
Author(s): Nhung T. H. Nguyen, Roselyn S. Gabud, Sophia Ananiadou
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0065390
The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text
Cited by: 145
Author(s): Evangelos Pafilis, Sune Frankild, Lucia Fanini, Sarah Faulwetter, Christina Pavloudi, Katerina Vasileiadou, Christos Arvanitidis, Lars Juhl Jensen
Software Mentions: 1
Published: over 11 years ago
10.1002/ece3.1036
BIOFRAG - a new database for analyzing BIOdiversity responses to forest FRAGmentation
Cited by: 26
Author(s): Marion Pfeifer, Véronique Lefebvre, Toby Gardner, Víctor Arroyo‐Rodríguez, Lander Baeten, Cristina Banks-Leite, Jose Barlow, Matthew G. Betts, J. Brunet, Alexis Cerezo, Laura M. Cisneros, Stuart J. Collard, Neil D’Cruze, Catarina da Silva Motta, Stéphanie Duguay, Hilde Eggermont, Felix Eigenbrod, Adam S. Hadley, Thor Hanson, Joseph E. Hawes, Tamara Heartsill Scalley, Brian T. Klingbeil, Annette Kolb, Urs G. Kormann, Sunil Kumar, Thibault Lachat, Poppy Lakeman Fraser, M. Victoria Lantschner, William F. Laurance, Inara R. Leal, Luc Lens, Charles J. Marsh, Guido Fabián Medina-Rangel, Stephanie Melles, Dirk Mezger, Johan A. Oldekop, William L. Overal, C. R. Owen, Carlos A. Peres, Ben Phalan, Anna M. Pidgeon, Oriana Pilia, Hugh P. Possingham, Max L. Possingham, Dinarzarde C. Raheem, Danilo Bandini Ribeiro, José Domingos Ribeiro‐Neto, W. Douglas Robinson, R. M. Robinson, Trina Rytwinski, Christoph Scherber, Eleanor M. Slade, Eduardo Somarriba, Philip C. Stouffer, Matthew J. Struebig, Jason M. Tylianakis, Teja Tscharntke, Andrew J. Tyre, J. Nicolás Urbina‐Cardona, Heraldo L. Vasconcelos, Oliver R. Wearn, Konstans Wells, Michael R. Willig, Eric M. Wood, Richard P. Young, Andrew V. Bradley, Robert M. Ewers
Software Mentions: 1
Published: over 10 years ago
10.1002/ece3.4800
<scp>SPECIES</scp>: A platform for the exploration of ecological data
Cited by: 12
Author(s): Christopher R. Stephens, Raúl Sierra-Alcocer, Constantino González‐Salazar, Juan M. Barrios, Juan Carlos Salazar Carrillo, Everardo Robredo Ezquivelzeta, Enrique del Callejo Canal
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-020-65592-y
Preparation and characterization of novel MWCNTs/Fe-Co doped TNTs nanocomposite for potentiometric determination of sulpiride in real water samples
Cited by: 7
Author(s): Mohamed M. Khalil, Ahmed A. Farghali, Waleed M. A. El Rouby, Islam Hassan Abd-Elgawad
Software Mentions: 1
Published: over 4 years ago
10.1155/2013/106357
Speciation Studies of Diorganotin(IV) Complexes with 3,3-Bis(1-methylimidazol-2-yl)propionate—Displacement Reaction by DNA Constituents
Cited by: 0
Author(s): Mohamed M. Shoukry, Safaa S. Hassan
Software Mentions: 1
Published: almost 12 years ago
10.2196/jmir.1323
Developing a Disease Outbreak Event Corpus
Cited by: 11
Author(s): Mike Conway, Ai Kawazoe, Hutchatai Chanlekha, Nigel Collier
Software Mentions: 1
Published: about 14 years ago
10.1007/s10953-013-0088-5
Equilibrium Studies of Dibutyltin(IV)–Zwitterionic Buffer Complexation
Cited by: 2
Author(s): M. A. El‐Gahami, Hassan M. Albishri
Software Mentions: 1
Published: about 11 years ago
10.1107/S1600577516019056
The SPECIES beamline at the MAX IV Laboratory: a facility for soft X-ray RIXS and APXPS
Cited by: 38
Author(s): Samuli Urpelainen, Conny Såthe, Walan Grizolli, Marcus Agåker, Ashley R. Head, Margaretha Andersson, Shih Wen Huang, Bente Jensen, Erik Wallén, Hamed Tarawneh, R. Sankari, R. Nyholm, Mirjam Lindberg, Peter Sjöblom, Niclas Johansson, Benjamin N. Reinecke, Mohammad A. Arman, Lindsay R. Merte, Jan Knudsen, Joachim Schnadt, Jesper N Andersen, Franz Hennies
Software Mentions: 1
Published: almost 8 years ago
10.3390/ani2010093
Livestock Helminths in a Changing Climate: Approaches and Restrictions to Meaningful Predictions
Cited by: 50
Author(s): Naomi J. Fox, Glenn Marion, Ross S. Davidson, Piran C. L. White, Michael R. Hutchings
Software Mentions: 1
Published: almost 13 years ago
10.1107/S1600577521000564
Upgrade of the SPECIES beamline at the MAX IV Laboratory
Cited by: 18
Author(s): Esko Kokkonen, Felipe Lopes Da Silva, Mikko Heikki Mikkelã, Niclas Johansson, S. W. Huang, J. M. Lee, Margaretha Andersson, Antonio Bartalesi, Benjamin N. Reinecke, Karsten Handrup, Hamed Tarawneh, R. Sankari, Jan Knudsen, Joachim Schnadt, Conny Såthe, Samuli Urpelainen
Software Mentions: 1
Published: almost 4 years ago
10.3897/BDJ.9.e61866
EcoBank: A flexible database platform for sharing ecological data
Cited by: 6
Author(s): Hyun Woo Kim, Sungsoo Yoon, Mokyoung Kim, Man‐Seok Shin, Heenam Yoon, Kidong Kim
Software Mentions: 1
Published: almost 4 years ago
10.1155/2009/512938
Equilibrium and Kinetic Investigations of the Interaction of Model Platinum(II) Complex with DNA Constituents in Reference to the Antitumour Activity: Complex-Formation Reactions of [Pd(N,N-diethylethylenediamine)(H<sub>2</sub>O)<sub>2</sub>]<sup>2+</sup>with Ligands of Biological Significance and Displacement Reactions of DNA Constituents
Cited by: 2
Author(s): Eman M. Shoukry
Software Mentions: 1
Published: almost 16 years ago
10.1155/2014/382646
Palladium(II) Complexes Containing Mixed Nitrogen-Sulphur Donor Ligands: Interaction of [Pd(Methionine Methyl Ester)(H<sub>2</sub>O)<sub>2</sub>]<sup>2+</sup>with Biorelevant Ligands
Cited by: 4
Author(s): Mohamed M. Shoukry, Sameya M. T. Ezzat
Software Mentions: 1
Published: almost 11 years ago
10.1155/2012/984291
Thermodynamic Investigation and Mixed Ligand Complex Formation of 1,4-Bis-(3-aminopropyl)-piperazine and Biorelevant Ligands
Cited by: 7
Author(s): Ahmed A. El‐Sherif, Mohamed R. Shehata, Mohamed M. Shoukry, Mohammad H. Barakat
Software Mentions: 1
Published: almost 13 years ago
10.1007/s10980-014-0148-2
Ecosystem service provision in a changing Europe: adapting to the impacts of combined climate and socio-economic change
Cited by: 46
Author(s): R. W. Dunford, Alison C. Smith, Paula A. Harrison, Diana Hanganu
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0078523
Conservation Value and Permeability of Neotropical Oil Palm Landscapes for Orchid Bees
Cited by: 18
Author(s): George Livingston, Shalene Jha, Andres Vega, Lawrence E. Gilbert
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0175277
Constructing a biodiversity terminological inventory
Cited by: 12
Author(s): Nhung T. H. Nguyen, Axel J. Soto, Georgios Kontonatsios, Riza Theresa Batista-Navarro, Sophia Ananiadou
Software Mentions: 1
Published: over 7 years ago