Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: SOP
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SOP
Generalised Additive P-Spline Regression Models Estimation
2 versions
Latest release: about 1 year ago
291 downloads last month
Papers Mentioning SOP 24
10.3389/fmicb.2018.01202
Relationships Between Gastrointestinal Parasite Infections and the Fecal Microbiome in Free-Ranging Western Lowland GorillasCited by: 15
Author(s): Klára Vlčková, Barbora Pafčo, Klára J. Petrželková, David Modrý, Angelique Todd, Carl J. Yeoman, Manolito Torralba, Brenda A. Wilson, Rebecca M. Stumpf, Bryan A. White, Karen E. Nelson, Steven R. Leigh, Andrés Gómez
Software Mentions: 6
Published: over 6 years ago
10.1371/journal.pone.0198342
Characterization of the fecal and mucosa-associated microbiota in dogs with colorectal epithelial tumorsCited by: 25
Author(s): Kristin Marie Valand Herstad, Aina Elisabeth Fossum Moen, John Christian Gaby, Lars Moe, Ellen Skancke
Software Mentions: 5
Published: over 6 years ago
10.1172/jci.insight.149257
Cervicovaginal microbiota and metabolome predict preterm birth risk in an ethnically diverse cohortCited by: 27
Author(s): Flavia Flaviani, Natasha L. Hezelgrave, Tokuwa Kanno, Erica M. Prosdocimi, Evonne Chin-Smith, Alexandra Ridout, Djuna K von Maydell, Vikash Mistry, William Wade, Andrew Shennan, Konstantina Dimitrakopoulou, Paul Seed, A. James Mason, Rachel Tribe
Software Mentions: 5
Published: about 3 years ago
10.3389/fmicb.2014.00752
Seasonal dynamics of bacterial and archaeal methanogenic communities in flooded rice fields and effect of drainageCited by: 58
Author(s): Björn Breidenbach, Ralf Conrad
Software Mentions: 4
Published: over 9 years ago
10.1155/2013/169526
SIVIC: Open-Source, Standards-Based Software for DICOM MR Spectroscopy WorkflowsCited by: 70
Author(s): Jason C. Crane, Marram P. Olson, Sarah J. Nelson
Software Mentions: 4
Published: over 11 years ago
10.1186/s13023-020-01372-1
Frizzled related protein deficiency impairs muscle strength, gait and calpain 3 levelsCited by: 4
Author(s): Leire Casas-Fraile, F.M. Cornelis, Domiziana Costamagna, Anabel Rico, Robin Duelen, Maurilio Sampaolesi, Adolfo López de Munaín, Rik Lories, Amets Sàenz
Software Mentions: 3
Published: over 4 years ago
10.1037/xan0000258
An associative analysis of recognition memory: Relative recency effects in an eye-tracking paradigm.Cited by: 1
Author(s): Aleksander W. Nitka, Charlotte Bonardi, Jasper Ward-Robinson
Software Mentions: 3
Published: about 4 years ago
10.1264/jsme2.ME18031
Comparing Two Common DNA Extraction Kits for the Characterization of Symbiotic Microbial Communities from Ascidian TissueCited by: 7
Author(s): James S. Evans, Susanna López‐Legentil, Patrick M. Erwin
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2019.02346
Cross-Regional View of Functional and Taxonomic Microbiota Composition in Obesity and Post-obesity Treatment Shows Country Specific Microbial ContributionCited by: 17
Author(s): Daniel A. Medina, Tianlu Li, Pamela Thomson, Alejandro Artacho, Vicente Pérez‐Brocal, Andrés Moya
Software Mentions: 2
Published: almost 5 years ago
10.3389/fmicb.2017.01711
Microbial Shifts in the Intestinal Microbiota of Salmonella Infected Chickens in Response to EnrofloxacinCited by: 28
Author(s): Jun Li, Haihong Hao, Guyue Cheng, Chunbei Liu, Saeed Ahmed, Muhammad Abu Bakr Shabbir, Hamid Hussain, Menghong Dai, Yuan Zhang
Software Mentions: 2
Published: about 7 years ago
10.1038/srep32411
Bacterial community structure and function shift across a northern boreal forest fire chronosequenceCited by: 33
Author(s): Hui Sun, Minna Santalahti, Jukka Pumpanen, Egle Köster, Frank Berninger, Tommaso Raffaello, Fred O. Asiegbu, Jussi Heinonsalo
Software Mentions: 2
Published: about 8 years ago
10.1186/1476-072X-13-52
The SPOTLIGHT virtual audit tool: a valid and reliable tool to assess obesogenic characteristics of the built environmentCited by: 87
Author(s): John R. Bethlehem, Joreintje D. Mackenbach, Maher Ben-Rebah, Sofie Compernolle, Ketevan Glonti, Helga Bárdos, Harry Rutter, Hélène Charreire, Jean Michel Oppert, Johannes Brug, Jeroen Lakerveld
Software Mentions: 2
Published: over 10 years ago
10.1038/s42003-021-01797-9
Surfactant-assisted one-pot sample preparation for label-free single-cell proteomicsCited by: 38
Author(s): Chia‐Feng Tsai, Peng Fei Zhang, David Scholten, Kendall J. Martin, Yiting Wang, Rui Zhao, William B. Chrisler, Dhwani Patel, Maowei Dou, Yuzhi Jia, Carolina Reduzzi, Xia Liu, Ronald J. Moore, Kristin Burnum-Johnson, Miao-Hsia Lin, Chuan‐Chih Hsu, Jon Jacobs, Jacob Kagan, Sudhir Srivastava, Karin D. Rodland, H. Steven Wiley, Weijun Qian, Richard Smith, Ying Zhu, Massimo Cristofanilli, Tao Liu, Huiping Liu, Tujin Shi
Software Mentions: 2
Published: over 3 years ago
10.3389/fmicb.2018.01153
In Vitro Modeling of Bile Acid Processing by the Human Fecal MicrobiotaCited by: 33
Author(s): Glynn Martin, Sofía Kolida, Julian R. Marchesi, Elizabeth J. Want, James E. Sidaway, Jonathan R. Swann
Software Mentions: 1
Published: over 6 years ago
10.1186/1471-2466-14-156
Intestinal current measurement versus nasal potential difference measurements for diagnosis of cystic fibrosis: a case–control studyCited by: 18
Author(s): Azadeh Bagheri-Hanson, Sebastian Nedwed, Claudia Rueckes-Nilges, Lutz Naehrlich
Software Mentions: 1
Published: almost 10 years ago
10.1016/j.bbr.2014.12.024
Relative recency influences object-in-context memoryCited by: 9
Author(s): Shu K. E. Tam, Charlotte Bonardi, Jasper Ward-Robinson
Software Mentions: 1
Published: over 9 years ago
10.3390/brainsci9110310
Spanish Validation of the Child and Adolescent Perfectionism Scale: Factorial Invariance and Latent Means Differences across Sex and AgeCited by: 5
Author(s): María Vicent, Cándido J. Inglés, Ricardo Sanmartín, Carolina Gonzálvez, Beatriz Delgado, José Manuel Garcı́a-Fernández
Software Mentions: 1
Published: almost 5 years ago
10.1590/0074-027601700125
Towards a standard protocol for antimony intralesional infiltration technique for cutaneous leishmaniasis treatmentCited by: 10
Author(s): Rosiana Estéfane da Silva, Janaína de Pina Carvalho, Dario Brock Ramalho, Maria Camilo Ribeiro de Senna, Herculano Moreira, Ana Rabello, Érika Cota, Gláucia Cota
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pcbi.1001083
Automatic Design of Digital Synthetic Gene CircuitsCited by: 89
Author(s): Mario Andrea Marchisio, Jörg Stelling
Software Mentions: 1
Published: over 13 years ago
10.1186/s40658-018-0231-x
Impact of different approaches to calculation of treatment activities on achieved doses in radioiodine therapy of benign thyroid diseasesCited by: 11
Author(s): Jochen Hammes, Lutz van Heek, Melanie Hohberg, M. Reifegerst, Simone Stockter, Markus Dietlein, Markus Wild, Alexander Drzezga, Matthias Schmidt, Carsten Kobe
Software Mentions: 1
Published: almost 6 years ago
10.3389/fnbeh.2021.632548
Second-Order Conditioning and Conditioned Inhibition in Different Moments of the Same Training: The Effect of A+ and AX− Trial NumberCited by: 1
Author(s): Clara Muñiz-Diez, Judit Muñiz-Moreno, Ignacio Loy
Software Mentions: 1
Published: over 3 years ago
10.3389/fbioe.2014.00042
Parts & Pools: A Framework for Modular Design of Synthetic Gene CircuitsCited by: 17
Author(s): Mario Andrea Marchisio
Software Mentions: 1
Published: almost 10 years ago
10.1107/S1744309111017374
Immobilized metal-affinity chromatography protein-recovery screening is predictive of crystallographic structure successCited by: 73
Author(s): Ryan Choi, Angela Kelley, D.J. Leibly, Stephen N. Hewitt, Alberto J. Napuli, Wesley Van Voorhis
Software Mentions: 1
Published: about 13 years ago
10.3389/fpsyg.2019.00504
A Quantitative Account of the Behavioral Characteristics of Habituation: The Sometimes Opponent Processes Model of Stimulus ProcessingCited by: 12
Author(s): Yerco E. Uribe-Bahamonde, Sebastián Becerra, Fernando P. Ponce, Edgar Vögel
Software Mentions: 1
Published: over 5 years ago