Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: SLOPE
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/SLOPE
Sorted L1 Penalized Estimation
9 versions
Latest release: over 2 years ago
3 dependent packages
268 downloads last month
Papers Mentioning SLOPE 16
10.1186/1471-2105-14-S11-S1
Computational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectivesCited by: 426
Author(s): Min Zhao, Qingguo Wang, Quan Wang, Peilin Jia, Zhongming Zhao
Software Mentions: 5
Published: about 11 years ago
10.1186/2049-1891-3-8
Current status and future perspectives for sequencing livestock genomesCited by: 40
Author(s): Yongsheng Bai, Maureen A. Sartor, James D. Cavalcoli
Software Mentions: 4
Published: over 12 years ago
10.1371/journal.pone.0187589
Comparing pseudo-absences generation techniques in Boosted Regression Trees models for conservation purposes: A case study on amphibians in a protected areaCited by: 33
Author(s): Francesco Cerasoli, Mattia Iannella, Paola D’Alessandro, Maurizio Biondi
Software Mentions: 3
Published: almost 7 years ago
10.1038/s41598-020-61392-6
Cholesterol-dependent enrichment of understudied erythrocytic stages of human Plasmodium parasitesCited by: 16
Author(s): Audrey C. Brown, Christopher C. Moore, Jennifer L. Guler
Software Mentions: 3
Published: over 4 years ago
10.1186/1471-2105-12-S14-S7
ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping informationCited by: 42
Author(s): Shin Suzuki, Tomohiro Yasuda, Yuichi Shiraishi, Satoru Miyano, Masao Nagasaki
Software Mentions: 2
Published: almost 13 years ago
10.7717/peerj.1847
Comprehensive profiling of retroviral integration sites using target enrichment methods from historical koala samples without an assembled reference genomeCited by: 14
Author(s): Pin Cui, Ulrike Löber, David E. Alquezar‐Planas, Yasuko Ishida, Alexandre Courtiol, Peter Timms, Rebecca N. Johnson, Dorina Lenz, Kristofer M. Helgen, Alfred L. Roca, Stefanie Hartman, Alex D. Greenwood
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0151825
Long-Term Effects of White-Tailed Deer Exclusion on the Invasion of Exotic Plants: A Case Study in a Mid-Atlantic Temperate ForestCited by: 22
Author(s): Xiaoli Shen, Norman A. Bourg, William J. McShea, Benjamín L. Turner
Software Mentions: 2
Published: over 8 years ago
10.3389/fgene.2021.700874
CNV-MEANN: A Neural Network and Mind Evolutionary Algorithm-Based Detection of Copy Number Variations From Next-Generation Sequencing DataCited by: 7
Author(s): Tihao Huang, Junqing Li, Baoxian Jia, Hongshi Sang
Software Mentions: 2
Published: about 3 years ago
10.3390/jcm9010132
Bioinformatics and Computational Tools for Next-Generation Sequencing Analysis in Clinical GeneticsCited by: 102
Author(s): Rute Pereira, Jorge Oliveira, Mário Sousa
Software Mentions: 2
Published: over 4 years ago
10.3390/s20185394
Data-Driven Methods for the Estimation of Leaf Water and Dry Matter Content: Performances, Potential and LimitationsCited by: 2
Author(s): Bin Yang, Hui Lin, Yuhao He
Software Mentions: 1
Published: almost 4 years ago
10.1186/s13073-015-0126-6
VERSE: a novel approach to detect virus integration in host genomes through reference genome customizationCited by: 59
Author(s): Qingguo Wang, Peilin Jia, Zhongming Zhao
Software Mentions: 1
Published: over 9 years ago
10.3390/microorganisms9091858
A Method for Rapid Screening, Expression, and Purification of Antimicrobial PeptidesCited by: 5
Author(s): Yingli Zhang, Zhongchen Li, Li Li, Rao Ben, Lixin Ma, Yaping Wang
Software Mentions: 1
Published: about 3 years ago
10.3390/ijerph17176030
Application of Well Drainage on Treating Seepage-Induced Reservoir LandslidesCited by: 5
Author(s): Zongxing Zou, Sha Lu, Fei Wang, Huiming Tang, Xinli Hu, Qinwen Tan, Yu Yuan
Software Mentions: 1
Published: about 4 years ago
10.7717/peerj-cs.169
Analysis of cause-effect inference by comparing regression errorsCited by: 16
Author(s): Patrick Blöbaum, Dominik Janzing, Takashi Washio, Shohei Shimizu, Bernhard Schölkopf
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms9030552
Atrial Natriuretic Peptide Affects Skin Commensal Staphylococcus epidermidis and Cutibacterium acnes Dual-Species BiofilmsCited by: 9
Author(s): Maria A. Ovcharova, Olga Geraskina, N. D. Danilova, E. A. Botchkova, S. V. Mart’yanov, Аlexey V. Feofanov, В. К. Плакунов, А. В. Ганнесен
Software Mentions: 1
Published: over 3 years ago
10.3390/microorganisms7020032
High-Throughput Rapid and Inexpensive Assay for Quantitative Determination of Low Cell-Density Yeast CulturesCited by: 6
Author(s): Debora Casagrande Pierantoni, Laura Della Corte, Luca Roscini, Gianluigi Cardinali
Software Mentions: 1
Published: over 5 years ago