cran: SKAT | Projects | Ecosyste.ms: Papers

10.1093/bioinformatics/bts568

‘Location, Location, Location’: a spatial approach for rare variant analysis and an application to a study on non-syndromic cleft lip with or without cleft palate
Cited by: 21
Author(s): Heide Fier, Sungho Won, Dmitry Prokopenko, Taofik AlChawa, Kerstin U. Ludwig, Rolf Fimmers, Edwin K. Silverman, Marcello Pagano, Elisabeth Mangold, Christoph Lange
Software Mentions: 1
Published: about 12 years ago

10.1093/bioinformatics/btu504

Greater power and computational efficiency for kernel-based association testing of sets of genetic variants
Cited by: 34
Author(s): Christoph Lippert, Jing Xiang, Danilo Horta, Christian Widmer, Carl Kadie, David Heckerman, Jennifer Listgarten
Software Mentions: 1
Published: over 10 years ago

10.1093/bioinformatics/btt177

A powerful and efficient set test for genetic markers that handles confounders
Cited by: 71
Author(s): Jennifer Listgarten, Christoph Lippert, Eun Yong Kang, Jing Xiang, Carl Kadie, David Heckerman
Software Mentions: 1
Published: over 11 years ago

10.1038/bjc.2016.50

Gene and pathway level analyses of germline DNA-repair gene variants and prostate cancer susceptibility using the iCOGS-genotyping array
Cited by: 16
Author(s): Edward J. Saunders, Tokhir Dadaev, Daniel Leongamornlert, Ali Amin Al Olama, Sara Benlloch, Graham G. Giles, Fredrik Wiklund, Henrik Grönberg, Christopher A. Haiman, Johanna Schleutker, Børge G. Nordestgaard, Ruth C. Travis, David E. Neal, Nora Pasayan, Kay–Tee Khaw, Janet L. Stanford, William J. Blot, Stephen N. Thibodeau, Christiane Maier, Adam S. Kibel, Cezary Cybulski, Lisa A. Cannon‐Albright, Hermann Brenner, Jong Y. Park, Radka Kaneva, Jyotsna Batra, Manuel R. Teixeira, Hardev Pandha, Koveela Govindasami, Ken Muir, Douglas F. Easton, Rosalind Eeles, Zsofia Kóte-Jarai
Software Mentions: 1
Published: over 8 years ago

10.1093/brain/awx082

A comprehensive analysis of rare genetic variation in amyotrophic lateral sclerosis in the UK
Cited by: 65
Author(s): Sarah Morgan, Aleksey Shatunov, William Sproviero, Ashley Jones, Maryam Shoai, Deborah Hughes, Ahmad Al Khleifat, Andrea Malaspina, Karen Morrison, Pamela J. Shaw, Christopher E. Shaw, Katie Sidle, Richard W. Orrell, Pietro Fratta, John Hardy, Alan Pittman, Ammar Al‐Chalabi
Software Mentions: 1
Published: over 7 years ago

10.1002/brb3.651

Targeted sequencing identifies genetic polymorphisms of flavin-containing monooxygenase genes contributing to susceptibility of nicotine dependence in European American and African American
Cited by: 11
Author(s): Tian-Xiao Zhang, Nancy L. Saccone, Laura J. Bierut, John P. Rice
Software Mentions: 1
Published: over 7 years ago

10.1002/cam4.2215

Genetic variants in p53 signaling pathway genes predict chemotherapy efficacy in colorectal cancer
Cited by: 5
Author(s): Ke Zhang, Yujie Meng, Xin Cao, Ye Xu, Mulong Du, Yuan Wu, Lingxiang Liu
Software Mentions: 1
Published: over 5 years ago

10.1002/mgg3.1218

Panel‐based targeted exome sequencing reveals novel candidate susceptibility loci for age‐related cataracts in Chinese Cohort
Cited by: 1
Author(s): Jiankang Li, Lili Li, Wei Li, Ziwei Wang, Feng‐Juan Gao, Fangyuan Hu, Shenghai Zhang, Su Qu, Jie Huang, Lu-Sheng Wang, Jihong Wu, Fang Chen
Software Mentions: 1
Published: over 4 years ago

10.1038/s41380-018-0264-5

Uncovering the complex genetics of human temperament
Cited by: 62
Author(s): Igor Zwir, Javier Arnedo, Coral del Val, Laura Pulkki‐Råback, Bettina Konte, Sarah Yang, Rocío Romero-Záliz, Mirka Hintsanen, Kevin M. Cloninger, Danilo Garcia, Dragan M. Švrakić, Sándor Rózsa, Maribel Martínez, Leo Pekka Lyytikäinen, Ina Giegling, Mika Kähönen, Helena Hernández‐Cuervo, Ilkka Seppälä, Emma Raitoharju, Gabriel A. de Erausquin, Olli T. Raitakari, Dan Rujescu, Teodor T. Postolache, Joohon Sung, Liisa Keltikangas‐Järvinen, Terho Lehtimäki, C. Robert Cloninger
Software Mentions: 1
Published: about 6 years ago

10.1038/s41380-018-0112-7

Whole exome sequencing study identifies novel rare and common Alzheimer’s-Associated variants involved in immune response and transcriptional regulation
Cited by: 165
Author(s): Joshua C. Bis, Xueqiu Jian, Brian W. Kunkle, Yuning Chen, Kara L. Hamilton‐Nelson, William S. Bush, William Salerno, Daniel Lancour, Yiyi Ma, Alan E. Renton, Edoardo Marcora, John Farrell, Yi Zhao, Liming Qu, Shahzad Ahmad, Najaf Amin, Philippe Amouyel, Gary W. Beecham, Jennifer E. Below, Dominique Campion, Laura B. Cantwell, Camille Charbonnier, Jaeyoon Chung, Paul K. Crane, Carlos Cruchaga, L. Adrienne Cupples, Jean‐François Dartigues, Stéphanie Debette, Jean‐François Deleuze, Lucinda A. Fulton, Stacey Gabriel, Emmanuelle Génin, Richard A. Gibbs, Alison Goate, Benjamin Grenier‐Boley, Namrata Gupta, Jonathan L. Haines, Aki S. Havulinna, Seppo Helisalmi, Mikko Hiltunen, Daniel P. Howrigan, M. Arfan Ikram, Jaakko Kaprio, Jan Konrad, Amanda B. Kuzma, Eric S. Lander, Mark Lathrop, Terho Lehtimäki, Honghuang Lin, Kari M. Mattila, Richard Mayeux, Donna M. Muzny, Waleed Nasser, Benjamin M. Neale, Kwangsik Nho, Gaël Nicolas, Devanshi Patel, Margaret A. Pericak‐Vance, Markus Perola, Bruce M. Psaty, Olivier Quenez, Farid Rajabli, Richard Redon, Christiane Reitz, Anne M. Remes, Veikko Salomaa, Chloé Sarnowski, Helena Schmidt, Michael A. Schmidt, Reinhold Schmidt, Hilkka Soininen, Timothy A. Thornton, Giuseppe Tosto, Christophe Tzourio, Sven J. van der Lee, Cornelia M. van Duijn, Otto Valladares, Badri N. Vardarajan, Li-San Wang, Weixin Wang, Ellen M. Wijsman, Richard K. Wilson, Daniela Witten, Kim C. Worley, Xiaoling Zhang, Alzheimer’s Disease Sequencing, Céline Bellenguez, Jean‐Charles Lambert, Mitja Kurki, Aarno Palotie, Mark J. Daly, Eric Boerwinkle, Kathryn L. Lunetta, Anita L. DeStefano, Josée Dupuis, Eden R. Martin, Gerard D. Schellenberg, Sudha Seshadri, Adam C. Naj, Myriam Fornage, Lindsay A. Farrer
Software Mentions: 1
Published: over 6 years ago

10.1038/s41380-018-0263-6

Uncovering the complex genetics of human character
Cited by: 72
Author(s): Igor Zwir, Javier Arnedo, Coral del Val, Laura Pulkki‐Råback, Bettina Konte, Sarah Yang, Rocío Romero-Záliz, Mirka Hintsanen, Kevin M. Cloninger, Danilo Garcia, Dragan M. Švrakić, Sándor Rózsa, Maribel Martínez, Leo-Pekka Lyytikäinen, Ina Giegling, Mika Kähönen, Helena Hernández‐Cuervo, Ilkka Seppälä, Emma Raitoharju, Gabriel A. de Erausquin, Olli T. Raitakari, Dan Rujescu, Teodor T. Postolache, Joohon Sung, Liisa Keltikangas‐Järvinen, Terho Lehtimäki, C. Robert Cloninger
Software Mentions: 1
Published: about 6 years ago

10.12688/wellcomeopenres.12583.3

Meta-analysis of exome array data identifies six novel genetic loci for lung function
Cited by: 18
Author(s): Victoria E. Jackson, Jeanne C. Latourelle, Louise V. Wain, Albert V. Smith, Megan L. Grove, Traci M. Bartz, Ma’en Obeidat, Michael A. Province, Wei Gao, Beenish Qaiser, David J. Porteous, Patricia A. Cassano, Tarunveer S. Ahluwalia, Niels Grarup, Li Jin, Elisabeth Altmaier, Jonathan Marten, Sarah E. Harris, Ani Manichaikul, Tess D. Pottinger, Ruifang Li‐Gao, Allan Lind-Thomsen, Anubha Mahajan, Lies Lahousse, Medea Imboden, Alexander Teumer, Bram P. Prins, Leo-Pekka Lyytikäinen, Guðný Eiríksdóttir, Nora Franceschini, Colleen M. Sitlani, Jennifer A. Brody, Yohan Bossé, Wim Timens, Aldi T. Kraja, Anu Loukola, Wenbo Tang, Yongmei Liu, Jette Bork-Jensen, Johanne Marie Justesen, Allan Linneberg, Leslie A. Lange, Rajesh Rawal, Stefan Karrasch, Jennifer E. Huffman, Blair H. Smith, Gail Davies, Kristin M. Burkart, Josyf C. Mychaleckyj, Tobias N Bonten, Stefan Enroth, Lars Lind, Guy Brusselle, Ashish Kumar, Beate Stubbe, Mika Kähönen, Annah B. Wyss, Bruce M. Psaty, Susan R. Heckbert, Ke Hao, Taina Rantanen, Stephen B. Kritchevsky, Kurt Lohman, Tea Skaaby, Charlotta Pisinger, Torben Hansen, Holger Schulz, Ozren Polašek, Archie Campbell, John M. Starr, Stephen S. Rich, Dennis O. Mook‐Kanamori, Åsa Johansson, Erik Ingelsson, André G. Uitterlinden, Stefan Weiß, Olli T. Raitakari, Vilmundur Gudnason, Kari E. North, Sina A. Gharib, Don D. Sin, Kent D. Taylor, George T. O’Connor, Jaakko Kaprio, Tamara B. Harris, Oluf Pederson, Henrik Vestergaard, James G. Wilson, Konstantin Strauch, Caroline Hayward, Shona M. Kerr, Ian J. Deary, R. Graham Barr, Renée de Mutsert, Ulf Gyllensten, Andrew P. Morris, M. Arfan Ikram, Nicole Probst‐Hensch, Sven Gläser, Eleftheria Zeggini, Terho Lehtimäki, David P. Strachan, Josée Dupuis, Alanna C. Morrison, Ian P. Hall, Martin D. Tobin, Stephanie J. London
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.3187

Common and rare genetic markers of lipid variation in subjects with type 2 diabetes from the ACCORD clinical trial
Cited by: 11
Author(s): Skylar W. Marvel, Daniel M. Rotroff, Michael J. Wagner, John B. Buse, Tammy M. Havener, Howard L. McLeod, Alison A. Motsinger‐Reif
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pcbi.1005580

Incorporating networks in a probabilistic graphical model to find drivers for complex human diseases
Cited by: 16
Author(s): Aziz M. Mezlini, Anna Goldenberg
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pgen.1005955

The MKK7 p.Glu116Lys Rare Variant Serves as a Predictor for Lung Cancer Risk and Prognosis in Chinese
Cited by: 14
Author(s): Fuman Qiu, Lei Yang, Xiaoxiao Lu, Jiansong Chen, Di Wu, Yongfang Wei, Qingqing Nong, Lisha Zhang, Wenxiang Fang, Xiaoliang Chen, Xiaoxuan Ling, Binyao Yang, Xin Zhang, Yifeng Zhou, Jiachun Lü
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pgen.1003224

A Hybrid Likelihood Model for Sequence-Based Disease Association Studies
Cited by: 20
Author(s): Yun Ching Chen, Hannah Carter, Jennifer Parla, Melissa Kramer, Fernando S. Goes, Mehdi Pirooznia, Peter P. Zandi, W. Richard McCombie, James B. Potash, Rachel Karchin
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pgen.1006327

Rare Functional Variant in TM2D3 is Associated with Late-Onset Alzheimer's Disease
Cited by: 46
Author(s): Jóhanna Jakobsdóttir, Sven J. van der Lee, Joshua C. Bis, Vincent Chouraki, David Li‐Kroeger, Shinya Yamamoto, Megan L. Grove, Adam C. Naj, Maria Vronskaya, Jose L. Salazar, Anita L. DeStefano, Jennifer A. Brody, Albert V. Smith, Najaf Amin, Rebecca Sims, Carla A. Ibrahim-Verbaas, Seung Hoan Choi, Claudia L. Satizabal, Oscar L. López, Alexa Beiser, M. Arfan Ikram, Melissa García, Caroline Hayward, Tibor V. Varga, Samuli Ripatti, Paul W. Franks, Göran Hallmans, Olov Rolandsson, Jan Håkon Jansson, David J. Porteous, Veikko Salomaa, Guðný Eiríksdóttir, Kenneth Rice, Hugo J. Bellen, Daniel Levy, André G. Uitterlinden, Valur Emilsson, Jerome I. Rotter, Thor Aspelund, Christopher J. O’Donnell, Annette L. Fitzpatrick, Lenore J. Launer, Albert Hofman, Li San Wang, Julie Williams, Gerard D. Schellenberg, Eric Boerwinkle, Bruce M. Psaty, Sudha Seshadri, Zhandong Liu, Vilmundur Gudnason, Cornelia M. van Duijn
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pgen.1006678

Rare variants in fox-1 homolog A (RBFOX1) are associated with lower blood pressure
Cited by: 17
Author(s): Karen Y. He, Heming Wang, Brian E. Cade, Priyanka Nandakumar, Ayush Giri, Erin B. Ware, Jeffrey Haessler, Jingjing Liang, Jennifer A. Smith, Nora Franceschini, Thu H. Le, Charles Kooperberg, Todd L. Edwards, Sharon L.R. Kardia, Xihong Lin, Aravinda Chakravarti, Susan Redline, Xiaofeng Zhu
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pgen.1006235

Accelerating Gene Discovery by Phenotyping Whole-Genome Sequenced Multi-mutation Strains and Using the Sequence Kernel Association Test (SKAT)
Cited by: 12
Author(s): Tiffany Timbers, S. Jayne Garland, Swetha Mohan, Stéphane Flibotte, Mark L. Edgley, Quintin Muncaster, Vinci Au, Erica Li-Leger, Federico I. Rosell, Jerry Cai, Suzanne Rademakers, Gert Jansen, Donald G. Moerman, Michel R. Leroux
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pgen.1004147

Re-sequencing Expands Our Understanding of the Phenotypic Impact of Variants at GWAS Loci
Cited by: 49
Author(s): Tanya M. Teslovich, Christian Fuchsberger, Vasily Ramensky, Pranav Yajnik, Daniel C. Koboldt, David E. Larson, Qunyuan Zhang, Ling Lin, Ryan Welch, Ding Li, Michael D. McLellan, Michele O'Laughlin, Catrina C. Fronick, Lucinda L. Fulton, Vincent Magrini, Amy J. Swift, Paul Elliott, Marjo‐Riitta Järvelin, Marika Kaakinen, Mark I. McCarthy, Leena Peltonen, Anneli Pouta, Lori L. Bonnycastle, Francis S. Collins, Narisu Narisu, Heather M. Stringham, Jaakko Tuomilehto, Samuli Ripatti, Robert S. Fulton, Chiara Sabatti, Richard K. Wilson, Michael Boehnke, Nelson B. Freimer
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pgen.1006284

Whole Exome Sequencing in Atrial Fibrillation
Cited by: 33
Author(s): Steven A. Lubitz, Jennifer A. Brody, Nathan A. Bihlmeyer, Carolina Roselli, Lu‐Chen Weng, Ingrid E. Christophersen, Álvaro Alonso, Eric Boerwinkle, Richard A. Gibbs, Joshua C. Bis, L. Adrienne Cupples, Peter J. Mohler, Deborah A. Nickerson, Donna M. Muzny, Marco Pérez, Bruce M. Psaty, Elsayed Z. Soliman, Nona Sotoodehnia, Kathryn L. Lunetta, Emelia J. Benjamin, Susan R. Heckbert, Dan E. Arking, Patrick T. Ellinor, Honghuang Lin
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pgen.1003694

A Flexible Approach for the Analysis of Rare Variants Allowing for a Mixture of Effects on Binary or Quantitative Traits
Cited by: 13
Author(s): Geraldine M. Clarke, Manuel A. Rivas, Andrew P. Morris
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pgen.1009060

Integrating comprehensive functional annotations to boost power and accuracy in gene-based association analysis
Cited by: 9
Author(s): Corbin Quick, Xiaoquan Wen, Gonçalo R. Abecasis, Michael Boehnke, Hyun Min Kang
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pgen.1004876

Identification and Functional Characterization of G6PC2 Coding Variants Influencing Glycemic Traits Define an Effector Transcript at the G6PC2-ABCB11 Locus
Cited by: 94
Author(s): Anubha Mahajan, Xueling Sim, Hui Jin Ng, Alisa K. Manning, Manuel A. Rivas, Heather M. Highland, Adam E. Locke, Niels Grarup, Hae Kyung Im, Pablo Cingolani, Jason Flannick, Pierre Fontanillas, Christian Fuchsberger, Kyle J. Gaulton, Tanya M. Teslovich, Nigel W. Rayner, Neil Robertson, Nicola L. Beer, Jana K. Rundle, Jette Bork-Jensen, Claes Ladenvall, Christine Blancher, David Buck, Gemma Buck, Noël P. Burtt, Stacey Gabriel, Anette P. Gjesing, Christopher J. Groves, Mette Hollensted, Jeroen R. Huyghe, Anne Jackson, Goo Jun, Johanne Marie Justesen, Massimo Mangino, Jacquelyn Murphy, Matt J. Neville, Robert C. Onofrio, Kerrin S. Small, Heather M. Stringham, Ann‐Christine Syvänen, Joseph Trakalo, Gonçalo R. Abecasis, Graeme I. Bell, John Blangero, Nancy J. Cox, Ravindranath Duggirala, Craig L. Hanis, Mark Seielstad, James G. Wilson, Cramer Christensen, Ivan Brandslund, Rainer Rauramaa, Gabriela L. Surdulescu, Alex S.F. Doney, Lars Lannfelt, Allan Linneberg, Bo Isomaa, Tiinamaija Tuomi, Marit E. Jørgensen, Torben Jørgensen, Johanna Kuusisto, Matti Uusitupa, Veikko Salomaa, Timothy D. Spector, Andrew D. Morris, Colin N.A. Palmer, Francis S. Collins, Karen L. Mohlke, Richard N. Bergman, Erik Ingelsson, Lars Lind, Jaakko Tuomilehto, Torben Hansen, Richard M. Watanabe, Inga Prokopenko, Josée Dupuis, Fredrik Karpe, Leif Groop, Markku Laakso, Oluf Pedersen, José C. Florez, Andrew P. Morris, David Altshuler, James B. Meigs, Michael Boehnke, Mark I. McCarthy, Cecilia M. Lindgren, Anna L. Gloyn
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pgen.1007142

Integrated rare variant-based risk gene prioritization in disease case-control sequencing studies
Cited by: 7
Author(s): Jhih Rong Lin, Quanwei Zhang, Ying Cai, Bernice E. Morrow, Zhengdong D. Zhang
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pgen.1004190

Gene-Based Sequencing Identifies Lipid-Influencing Variants with Ethnicity-Specific Effects in African Americans
Cited by: 31
Author(s): Amy R. Bentley, Guanjie Chen, Daniel Shriner, Ayo P. Doumatey, Jie Zhou, Hanxia Huang, James C. Mullikin, Robert W. Blakesley, Nancy F. Hansen, Gerard G. Bouffard, Praveen F. Cherukuri, Baishali Maskeri, Alice Young, Adebowale Adeyemo, Charles N. Rotimi
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pgen.1004314

Whole Exome Re-Sequencing Implicates CCDC38 and Cilia Structure and Function in Resistance to Smoking Related Airflow Obstruction
Cited by: 29
Author(s): Louise V. Wain, Ian Sayers, María Soler Artigas, Michael A. Portelli, Eleftheria Zeggini, Ma’en Obeidat, Don D. Sin, Yohan Bossé, David C. Nickle, Corry‐Anke Brandsma, Anders Mälarstig, Ciara Vangjeli, Scott A. Jelinsky, Sally John, Iain Kilty, Tricia M. McKeever, Nick Shrine, James P. Cook, Shrina Patel, Tim D. Spector, Edward J. Hollox, Ian P. Hall, Martin D. Tobin
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pgen.1002496

The Empirical Power of Rare Variant Association Methods: Results from Sanger Sequencing in 1,998 Individuals
Cited by: 101
Author(s): Martin Ladouceur, Zari Dastani, Yurii S. Aulchenko, Celia M.T. Greenwood, J. Brent Richards
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0222284

Association between mitochondrial genetic variation and breast cancer risk: The Multiethnic Cohort
Cited by: 5
Author(s): Yuqing Li, Elena E. Giorgi, Kenneth B. Beckman, Christian Caberto, Rémi Kazma, Annette Lum-Jones, Christopher A. Haiman, Loı̈c Le Marchand, Daniel O. Stram, Richa Saxena, Iona Cheng
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0178504

Comparison of single-marker and multi-marker tests in rare variant association studies of quantitative traits
Cited by: 7
Author(s): Stefan Konigorski, Yildiz E. Yilmaz, Tobias Pischon
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0190486

Weighted functional linear regression models for gene-based association analysis
Cited by: 7
Author(s): Nadezhda M. Belonogova, G. R. Svishcheva, James F. Wilson, Harry Campbell, Tatiana I. Axenovich
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0191153

Examining the role of common and rare mitochondrial variants in schizophrenia
Cited by: 24
Author(s): Vanessa F. Gonçalves, Stephanie N Giamberardino, James J. Crowley, Marquis P. Vawter, Richa Saxena, Cynthia M. Bulik, Zeynep Yılmaz, Christina M. Hultman, Pamela Sklar, James L. Kennedy, Patrick F. Sullivan, Jo Knight
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0233847

A rank-based normalization method with the fully adjusted full-stage procedure in genetic association studies
Cited by: 5
Author(s): Li‐Chu Chien
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0075897

Weighted SNP Set Analysis in Genome-Wide Association Study
Cited by: 6
Author(s): Hui Dai, Yang Zhao, Cheng Qian, Min Cai, Ruyang Zhang, Minjie Chu, Juncheng Dai, Zhibin Hu, Hongbing Shen, Feng Chen
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0201186

Testing an optimally weighted combination of common and/or rare variants with multiple traits
Cited by: 6
Author(s): Zhenchuan Wang, Qiuying Sha, Shurong Fang, Kui Zhang, Shuanglin Zhang
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0150464

Genetic Evaluation of Schizophrenia Using the Illumina HumanExome Chip
Cited by: 12
Author(s): Tim Moons, Marc De Hert, Gellens Edith, Gielen Leen, Kim Sweers, Jacqmaert Sigrun, Ruud van Winkel, Philippe Vandekerckhove, Stephan Claes
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0051680

Association of the Innate Immunity and Inflammation Pathway with Advanced Prostate Cancer Risk
Cited by: 50
Author(s): Rémi Kazma, Joel Mefford, Iona Cheng, Sarah J. Plummer, Albert M. Levin, Benjamin A. Rybicki, Graham Casey, John S. Witte
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0083057

A Robust Model-free Approach for Rare Variants Association Studies Incorporating Gene-Gene and Gene-Environmental Interactions
Cited by: 12
Author(s): Ruixue Fan, Shaw-Hwa Lo
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0120873

A Robust GWSS Method to Simultaneously Detect Rare and Common Variants for Complex Disease
Cited by: 0
Author(s): Chung-Feng Kao, Jia‐Rou Liu, Hung Hung, Po-Hsiu Kuo
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0030238

Reconsidering Association Testing Methods Using Single-Variant Test Statistics as Alternatives to Pooling Tests for Sequence Data with Rare Variants
Cited by: 37
Author(s): Daniel D. Kinnamon, Ray E. Hershberger, Eden R. Martin
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0172995

Exome-wide association study reveals novel susceptibility genes to sporadic dilated cardiomyopathy
Cited by: 92
Author(s): Ulrike Esslinger, Sophie Garnier, Agathe Korniat, Carole Proust, Georgios Kararigas, Martina Müller‐Nurasyid, Jean Philippe Empana, Michael Morley, Claire Perret, Klaus Stark, Alexander Bick, Sanjay K. Prasad, Jennifer Kriebel, Jin Li, Laurence Tiret, Konstantin Strauch, Declan P O’Regan, Kenneth B. Marguiles, Jonathan G. Seidman, Pierre Boutouyrie, Patrick Lacolley, Xavier Jouven, Christian Hengstenberg, Michel Komajda, Håkon Håkonarson, Richard Isnard, Eloisa Arbustini, Harald Grallert, Stuart A. Cook, Christine E. Seidman, Vera Regitz–Zagrosek, Thomas P. Cappola, Philippe Charron, François Cambien, Eric Villard
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0162910

Pathway Analysis Incorporating Protein-Protein Interaction Networks Identified Candidate Pathways for the Seven Common Diseases
Cited by: 6
Author(s): Peng-Lin Lin, Yifeng Yu, Ren‐Hua Chung
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0085728

Rare Variant Association Testing by Adaptive Combination of P-values
Cited by: 29
Author(s): Wan-Yu Lin, Xiang‐Yang Lou, Guimin Gao, Nianjun Liu
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0180046

Whole exome sequence-based association analyses of plasma amyloid-β in African and European Americans; the Atherosclerosis Risk in Communities-Neurocognitive Study
Cited by: 18
Author(s): Jeannette Simino, Zhiying Wang, Jan Bressler, Vincent Chouraki, Qiong Yang, Steven G. Younkin, Sudha Seshadri, Myriam Fornage, Eric Boerwinkle, Thomas H. Mosley
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0099360

Investigation of Pathogenic Genes in Peri-Implantitis from Implant Clustering Failure Patients: A Whole-Exome Sequencing Pilot Study
Cited by: 18
Author(s): Soohyung Lee, Jiyoung Kim, Jihye Hwang, Sanguk Kim, Jae‐Hoon Lee, Dong‐Hoo Han
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0107800

Family-Based Association Test Using Both Common and Rare Variants and Accounting for Directions of Effects for Sequencing Data
Cited by: 5
Author(s): Ren Hua Chung, Wei Yun Tsai, Eden R. Martin
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0094337

Association Testing of Clustered Rare Causal Variants in Case-Control Studies
Cited by: 15
Author(s): Wan-Yu Lin
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0188911

Exome array analysis of adverse reactions to fluoropyrimidine-based therapy for gastrointestinal cancer
Cited by: 1
Author(s): Matthew Traylor, Jemma Walker, Adele Corrigan, M. Arenas Hernandez, Stephen Newhouse, Amos Folarin, Hamel Patel, Paul Ross, Jeremy Sanderson, James Spicer, Natalie J. Prescott, Christopher G. Mathew, Anthony M. Marinaki, Cathryn M. Lewis
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0099407

FFBSKAT: Fast Family-Based Sequence Kernel Association Test
Cited by: 20
Author(s): G. R. Svishcheva, Nadezhda M. Belonogova, Tatiana I. Axenovich
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0150079

Influence of Coding Variability in APP-Aβ Metabolism Genes in Sporadic Alzheimer’s Disease
Cited by: 30
Author(s): Celeste Sassi, Perry G. Ridge, Michael A. Nalls, Raphael Gibbs, Jinhui Ding, Michelle K. Lupton, Claire Troakes, Katie Lunnon, Safa Al‐Sarraj, Kristelle Brown, Christopher Medway, Jenny Lord, James Turton, Kevin Morgan, John Powell, John S. K. Kauwe, Carlos Cruchaga, José Brás, Alison M. Goate, Andrew B. Singleton, Rita Guerreiro, John Hardy
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0065395

Region-Based Association Analysis of Human Quantitative Traits in Related Individuals
Cited by: 30
Author(s): Nadezhda M. Belonogova, G. R. Svishcheva, Cornelia M. van Duijn, Yurii S. Aulchenko, Tatiana I. Axenovich
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0062119

Gastrointestinal Stromal Tumors, Somatic Mutations and Candidate Genetic Risk Variants
Cited by: 22
Author(s): Katie M. O’Brien, Irene Orlow, Cristina R. Antonescu, Karla V. Ballman, Linda McCall, Ronald P. DeMatteo, Lawrence S. Engel
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0044978

Association Test Based on SNP Set: Logistic Kernel Machine Based Test vs. Principal Component Analysis
Cited by: 10
Author(s): Yang Zhao, Feng Chen, Rihong Zhai, Xihong Lin, Nancy Diao, David C. Christiani
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0128988

Mutation Burden of Rare Variants in Schizophrenia Candidate Genes
Cited by: 17
Author(s): Simon L. Girard, Patrick A. Dion, Cynthia V. Bourassa, Steve Geoffroy, Pamela Lachance-Touchette, Amina Barhdadi, Mathieu Langlois, Ridha Joober, Marie‐Odile Krebs, Marie‐Pierre Dubé, Guy A. Rouleau
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0115971

Adaptive Combination of P-Values for Family-Based Association Testing with Sequence Data
Cited by: 5
Author(s): Wan-Yu Lin
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0176301

Next generation sequencing to dissect the genetic architecture of KNG1 and F11 loci using factor XI levels as an intermediate phenotype of thrombosis
Cited by: 4
Author(s): Laura Martín-Fernández, Giovana Gavidia-Bovadilla, Irene Corrales, Héléna Brunel, Leonardo Ramı́rez, Sònia López, Juan Carlos Souto, Francisco Vidal, José Manuel Nieto Soria
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0199837

Exome sequencing-based identification of novel type 2 diabetes risk allele loci in the Qatari population
Cited by: 6
Author(s): Sarah L. O’Beirne, Jacqueline Salit, Juan L. Rodríguez-Flores, Michelle R. Staudt, Charbel Abi Khalil, Khalid Fakhro, Amal Robay, Monica D. Ramstetter, Joel A. Malek, Mahmoud Zirie, Amin Jayyousi, Ramin Badii, Ajayeb Al Nabet Al-Marri, Abdulbari Bener, Mai Mahmoud, Marı́a J. Chiuchiolo, Alya Al-Shakaki, Omar Chidiac, Dora J. Stadler, Jason G. Mezey, Ronald G. Crystal
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0111269

Immunization Associated with Erectile Dysfunction Based on Cross-Sectional and Genetic Analyses
Cited by: 10
Author(s): Yang Chen, Xianxiang Xin, Haiying Zhang, Jianfeng Xu, Yong Gao, Aihua Tan, Xiaobo Yang, Xue Qin, Yanling Hu, Zengnan Mo
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0138223

A Multi-Marker Genetic Association Test Based on the Rasch Model Applied to Alzheimer’s Disease
Cited by: 7
Author(s): Wenjia Wang, Jonas Mandel, Jan Bouaziz, Daniel Commenges, Serguei Nabirotchkine, Ilya Chumakov, Daniel Cohen, Mickaël Guedj
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0143489

Powerful Tests for Multi-Marker Association Analysis Using Ensemble Learning
Cited by: 0
Author(s): Badri Padhukasahasram, Chandan K. Reddy, Albert M. Levin, Esteban G. Burchard, L. Keoki Williams
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0217314

Influence of genetic factors on long-term treatment related neurocognitive complications, and on anxiety and depression in survivors of childhood acute lymphoblastic leukemia: The Petale study
Cited by: 13
Author(s): Kateryna Petrykey, Sarah Lippé, Philippe Robaey, Serge Sultan, Julie Laniel, Simon Drouin, Laurence Bertout, Patrick Beaulieu, Pascal St-Onge, Aubree Boulet‐Craig, Aziz Rezgui, Yutaka Yasui, Yadav Sapkota, Kevin R. Krull, Melissa M. Hudson, Caroline Laverdière, Daniel Sinnett, Maja Krajinović
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0220914

A gene based approach to test genetic association based on an optimally weighted combination of multiple traits
Cited by: 0
Author(s): Jianjun Zhang, Qiuying Sha, Guanfu Liu, Xuexia Wang
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0044173

Adaptive Ridge Regression for Rare Variant Detection
Cited by: 8
Author(s): Haimao Zhan, Shizhong Xu
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0180485

Rare variants of small effect size in neuronal excitability genes influence clinical outcome in Japanese cases of SCN1A truncation-positive Dravet syndrome
Cited by: 18
Author(s): Michael F. Hammer, Atsushi Ishii, Laurel Johnstone, Alexander Tchourbanov, Branden Lau, Ryan Sprissler, Brian Hallmark, Miao Zhang, Jin Zhou, Joseph C. Watkins, Shinichi Hirose
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0086126

Blocking Approach for Identification of Rare Variants in Family-Based Association Studies
Cited by: 6
Author(s): Asuman Türkmen, Shili Lin
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0056626

Assessing the Impact of Differential Genotyping Errors on Rare Variant Tests of Association
Cited by: 22
Author(s): Morgan Mayer-Jochimsen, Shannon Fast, Nathan L. Tintle
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0125204

Gene-Wise Association of Variants in Four Lysosomal Storage Disorder Genes in Neuropathologically Confirmed Lewy Body Disease
Cited by: 51
Author(s): Lorraine N. Clark, Robin B. Chan, Rong Cheng, Xinmin Liu, Naeun Park, Nancy L. Parmalee, Sergey Kisselev, Etty Cortés, Patrícia Torres, Gregory M. Pastores, Jean Paul Vonsattel, Roy N. Alcalay, Karen Marder, Lawrence S. Honig, Stanley Fahn, Richard Mayeux, Michael L. Shelanski, Gilbert Di Paolo, Joseph H. Lee
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0174356

Rare mutations and potentially damaging missense variants in genes encoding fibrillar collagens and proteins involved in their production are candidates for risk for preterm premature rupture of membranes
Cited by: 13
Author(s): Bhavi P. Modi, María E. Teves, Laurel N. Pearson, Hardik I. Parikh, Piya Chaemsaithong, Nihar U. Sheth, Timothy P. York, Roberto Romero, Jerome F. Strauss
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0167202

Rare Variants in NOD1 Associated with Carotid Bifurcation Intima-Media Thickness in Dominican Republic Families
Cited by: 4
Author(s): Nicole Dueker, Ashley Beecham, Liyong Wang, Susan H. Blanton, Shengru Guo, Tatjana Rundek, Ralph L. Sacco
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0032485

Joint Rare Variant Association Test of the Average and Individual Effects for Sequencing Studies
Cited by: 10
Author(s): Yuanjia Wang, Yin-Hsiu Chen, Qiong Yang
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0217477

Exome chip association study excluded the involvement of rare coding variants with large effect sizes in the etiology of anorectal malformations
Cited by: 4
Author(s): Romy van de Putte, Charlotte H. W. Wijers, Heiko Reutter, Sita H. Vermeulen, Carlo Marcelis, Erwin Brosens, Paul M. A. Broens, Markus Homberg, Michael Ludwig, Ekkehart Jenetzky, Nadine Zwink, Cornelius E. J. Sloots, Annelies de Klein, Alice S. Brooks, Robert M.W. Hofstra, Sophie A. C. Holsink, Loes F M van der Zanden, Tessel E. Galesloot, Paul Kwong‐Hang Tam, Marloes Steehouwer, Rocío Acuña-Hidalgo, Maartje van de Vorst, Lambertus A. Kiemeney, María-Mercé García-Barceló, Ivo de Blaauw, Han G. Brunner, Nel Roeleveld, Iris A. L. M. van Rooij
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0152984

Association of Common Polymorphisms in the Nicotinic Acetylcholine Receptor Alpha4 Subunit Gene with an Electrophysiological Endophenotype in a Large Population-Based Sample
Cited by: 7
Author(s): Arian Mobascher, Amalia Díaz-Lacava, Michael Wagner, Jürgen Gallinat, Thomas F. Wienker, Dmitriy Drichel, Tim Becker, Michael Steffens, Norbert Dahmen, Gerhard Gründer, Norbert Thürauf, Falk Kiefer, Johannes Kornhuber, Mohammad Reza Toliat, Holger Thiele, Peter Nürnberg, Ortrud K. Steinlein, Georg Winterer
Software Mentions: 1
Published: over 8 years ago

10.3390/cancers13081864

Genetic Analysis Reveals Rare Variants in T-Cell Response Gene MR1 Associated with Poor Overall Survival after Urothelial Cancer Diagnosis
Cited by: 0
Author(s): Lisa Bang, Manu Shivakumar, Tullika Garg, Dokyoon Kim
Software Mentions: 1
Published: over 3 years ago

10.1016/j.celrep.2020.108456

Rare Variant Burden Analysis within Enhancers Identifies CAV1 as an ALS Risk Gene
Cited by: 24
Author(s): Johnathan Cooper‐Knock, Sai Zhang, Kevin P. Kenna, Tobias Moll, John Franklin, Samantha Allen, Helia Ghahremani Nezhad, Alfredo Iacoangeli, Nancy‐Sarah Yacovzada, Chen Eitan, Eran Hornstein, Eran Elhaik, Petra Celadova, Daniel Bose, Sali M.K. Farhan, Simon Fishilevich, Doron Lancet, Karen E. Morrison, Christopher E. Shaw, Ammar Al‐Chalabi, Jan H. Veldink, Janine Kirby, M Snyder, Pamela J. Shaw
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41422-020-0322-9

The ChinaMAP analytics of deep whole genome sequences in 10,588 individuals
Cited by: 138
Author(s): Yanan Cao, Lin Li, Min Xu, Zhihui Feng, Xiaohui Sun, Jieli Lu, Yu Xu, Peina Du, Tiange Wang, Ruying Hu, Zhen Ye, Lixin Shi, Xulei Tang, Yan Li, Zhengnan Gao, Gang Chen, Yinfei Zhang, Lulu Chen, Guang Ning, Yufang Bi, Weiqing Wang
Software Mentions: 1
Published: over 4 years ago

10.1186/2045-3329-3-12

Gastrointestinal stromal tumors: a case-only analysis of single nucleotide polymorphisms and somatic mutations
Cited by: 11
Author(s): Katie M. O’Brien, Irene Orlow, Cristina R. Antonescu, Karla V. Ballman, Linda McCall, Ronald P. DeMatteo, Lawrence S. Engel
Software Mentions: 1
Published: about 11 years ago

10.1002/ctm2.152

Genetic modifiers of long‐term survival in sickle cell anemia
Cited by: 19
Author(s): Ambroise Wonkam, Emile R. Chimusa, Khuthala Mnika, Gift D. Pule, Valentina Josiane Ngo Bitoungui, Nicola Mulder, Daniel Shriner, Charles N. Rotimi, Adebowale Adeyemo
Software Mentions: 1
Published: over 4 years ago

10.1038/s42003-020-01251-2

A multi-ethnic meta-analysis identifies novel genes, including ACSL5, associated with amyotrophic lateral sclerosis
Cited by: 45
Author(s): Ryoichi Nakamura, Kazuharu Misawa, Genki Tohnai, Masahiro Nakatochi, Sho Furuhashi, Naoki Atsuta, Naoki Hayashi, Daichi Yokoi, H. Watanabe, Haruo Watanabe, Masahisa Katsuno, Yuishin Izumi, Kazuaki Kanai, Nobutaka Hattori, Mitsuya Morita, Akira Taniguchi, Osamu Kano, Masaya Oda, Kazumoto Shibuya, Satoshi Kuwabara, Naoki Suzuki, Masashi Akiyama, Yasuyuki Ohta, Toru Yamashita, Kōji Abe, Rina Hashimoto, Ikuko Aiba, Koichi Okamoto, Kouichi Mizoguchi, Kazuko Hasegawa, Yohei Okada, Tomohiko Ishihara, Osamu Onodera, Kenichiro Nakashima, Ryuji Kaji, Yoichiro Kamatani, Shiro Ikegawa, Yukihide Momozawa, Michiaki Kubo, Noriko Ishida, Naoko Minegishi, Masao Nagasaki, Gen Sobue
Software Mentions: 1
Published: about 4 years ago

10.1007/s11892-019-1142-5

The Contribution of Low-Frequency and Rare Coding Variation to Susceptibility to Type 2 Diabetes
Cited by: 13
Author(s): Jason Flannick
Software Mentions: 1
Published: over 5 years ago

10.1016/j.ebiom.2016.07.011

Variation of 46 Innate Immune Genes Evaluated for their Contribution in Pneumococcal Meningitis Susceptibility and Outcome
Cited by: 12
Author(s): Bart Ferwerda, Mercedes Valls Serón, Aldo Jongejan, Aeilko H. Zwinderman, Madelijn Geldhoff, Arie van der Ende, Frank Baas, Matthijs C. Brouwer, Diederik van de Beek
Software Mentions: 1
Published: over 8 years ago

10.1038/ejhg.2016.113

A pathway-centric approach to rare variant association analysis
Cited by: 12
Author(s): Tom G Richardson, Nicholas J. Timpson, Colin Campbell, Tom R. Gaunt
Software Mentions: 1
Published: about 8 years ago

10.1038/ejhg.2015.170

Search for new loci and low-frequency variants influencing glioma risk by exome-array analysis
Cited by: 9
Author(s): Ben Kinnersley, Yoichiro Kamatani, Marianne Labussière, Yufei Wang, Pilar Galán, Karima Mokhtari, Jean‐Yves Delattre, Konstantinos Gousias, Johannes Schramm, Minouk J. Schoemaker, Anthony Swerdlow, Sarah Fleming, Stefan Herms, Stefanie Heilmann, Markus M. Nöthen, Matthias Simon, Marc Sanson, Mark Lathrop, Richard S. Houlston
Software Mentions: 1
Published: over 9 years ago

10.1038/ejhg.2013.69

Kernel canonical correlation analysis for assessing gene–gene interactions and application to ovarian cancer
Cited by: 31
Author(s): Nicholas B. Larson, Gregory D. Jenkins, Melissa C. Larson, Robert A. Vierkant, Thomas A. Sellers, Catherine M. Phelan, Joellen M. Schildkraut, Rebecca Sutphen, Paul Pharoah, Simon A. Gayther, Nicolas Wentzensen, Ellen L. Goode, Brooke L. Fridley
Software Mentions: 1
Published: over 11 years ago

10.3389/fnagi.2020.584801

Association of Genes Involved in the Metabolic Pathways of Amyloid-β and Tau Proteins With Sporadic Late-Onset Alzheimer’s Disease in the Southern Han Chinese Population
Cited by: 3
Author(s): Xuewen Xiao, Bin Jiao, Xinxin Liao, Weiwei Zhang, Zhenhua Yuan, Lijia Guo, Xin Wang, Lu Zhou, Xixi Liu, Xinxiang Yan, Beisha Tang, Lu Shen
Software Mentions: 1
Published: about 4 years ago

10.3389/fcell.2020.00576

Association Study of Genetic Variants in Autophagy Pathway and Risk of Non-syndromic Cleft Lip With or Without Cleft Palate
Cited by: 5
Author(s): Shu Lou, Lan Ma, Shiyi Kan, Xin Yu, Yuting Wang, Fan Yang, Guirong Zhu, Liwen Fan, Dandan Li, Hua Wang, Wei Wang, Weibing Zhang, Lin Wang, Yongchu Pan
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2021.657499

Identifying Susceptibility Loci for Cutaneous Squamous Cell Carcinoma Using a Fast Sequence Kernel Association Test
Cited by: 2
Author(s): Manyan Huang, Chao Lyu, Xin Li, Abrar A. Qureshi, Jiali Han, Ming Li
Software Mentions: 1
Published: over 3 years ago

10.3389/fgene.2017.00228

A Powerful Gene-Based Test Accommodating Common and Low-Frequency Variants to Detect Both Main Effects and Gene-Gene Interaction Effects in Case-Control Studies
Cited by: 2
Author(s): Ren‐Hua Chung, Chen-Yu Kang
Software Mentions: 1
Published: almost 7 years ago

10.3389/fgene.2013.00195

New insights into the genetic mechanism of IQ in autism spectrum disorders
Cited by: 15
Author(s): Harold Zhaokun Wang, Haide Qin, Wei Guo, Jack Samuels, Yin Yao Shugart
Software Mentions: 1
Published: almost 12 years ago

10.3389/fgene.2013.00252

On multi-marker tests for association in case-control studies
Cited by: 5
Author(s): Margaret A. Taub, Holger Schwender, Samuel G. Younkin, Thomas A. Louis, Ingo Ruczinski
Software Mentions: 1
Published: almost 12 years ago

10.3389/fgene.2021.588452

Whole-Exome Sequencing and hiPSC Cardiomyocyte Models Identify MYRIP, TRAPPC11, and SLC27A6 of Potential Importance to Left Ventricular Hypertrophy in an African Ancestry Population
Cited by: 4
Author(s): Marguerite R. Irvin, Praful Aggarwal, Steven A. Claas, Lisa de las Fuentes, Anh N., C. Charles Gu, Andrea Matter, Benjamin Olson, Amit Patki, Karen Schwander, Joshua D. Smith, Vinodh Srinivasasainagendra, Hemant K. Tiwari, Amy Turner, Deborah A. Nickerson, D. C. Rao, Ulrich Broeckel, Donna K. Arnett
Software Mentions: 1
Published: almost 4 years ago

10.3389/fgene.2020.591606

Multi-Set Testing Strategies Show Good Behavior When Applied to Very Large Sets of Rare Variants
Cited by: 1
Author(s): Ruby Fore, Jaden Boehme, Kevin Li, Jason Westra, Nathan L. Tintle
Software Mentions: 1
Published: about 4 years ago

10.3389/fgene.2020.00336

Exome-Wide Association Study Reveals Several Susceptibility Genes and Pathways Associated With Acute Coronary Syndromes in Han Chinese
Cited by: 3
Author(s): Qiwen Zheng, Yan Zhang, Jie Jiang, Jia Jia, Fangfang Fan, Yanjun Gong, Zhi Wang, Qiuping Shi, Dafang Chen, Yong Huo
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2013.00233

Gene-based multiple regression association testing for combined examination of common and low frequency variants in quantitative trait analysis
Cited by: 7
Author(s): Yung Joon Yoo, Lei Sun, Shelley B. Bull
Software Mentions: 1
Published: almost 12 years ago

10.3389/fgene.2021.639418

Genome-Wide Identification of Rare and Common Variants Driving Triglyceride Levels in a Nevada Population
Cited by: 7
Author(s): Robert W. Read, Karen Schlauch, Vincent Lombardi, Elizabeth T. Cirulli, Nicole Washington, James T. Lu, Joseph J. Grzymski
Software Mentions: 1
Published: over 3 years ago

10.3389/fgene.2019.00398

A Cautionary Note on the Effects of Population Stratification Under an Extreme Phenotype Sampling Design
Cited by: 9
Author(s): Michela Panarella, Kelly Burkett
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2021.662846

Whole-Exome Sequencing Analysis of Human Semen Quality in Russian Multiethnic Population
Cited by: 4
Author(s): Semyon Kolmykov, Gennady V. Vasiliev, Л. В. Осадчук, Maxim Kleschev, А. В. Осадчук
Software Mentions: 1
Published: over 3 years ago

10.3389/fgene.2015.00136

PCSK9 variation and association with blood pressure in African Americans: preliminary findings from the HyperGEN and REGARDS studies
Cited by: 23
Author(s): Ngan T.K. Tran, Stella Aslibekyan, Hemant K. Tiwari, Degui Zhi, Yun Ju Sung, Steven C. Hunt, DC Rao, Ulrich Broeckel, Suzanne E. Judd, Paul Muntner, Shia T. Kent, Donna K. Arnett, Marguerite R. Irvin
Software Mentions: 1
Published: over 9 years ago

10.3389/fimmu.2019.00258

Exploring Impact of Rare Variation in Systemic Lupus Erythematosus by a Genome Wide Imputation Approach
Cited by: 15
Author(s): Manuel Martínez-Bueno, Marta E. Alarcón‐Riquelme
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2021.615527

Common and Rare Variants Genetic Association Analysis of Circulating Neutrophil Extracellular Traps
Cited by: 6
Author(s): Samantha J. Donkel, Eliana Portilla Fernández, Shahzad Ahmad, Fernando Rivadeneira, Frank J.A. van Rooij, M. Arfan Ikram, Frank W.G. Leebeek, Moniek P.M. de Maat, Mohsen Ghanbari
Software Mentions: 1
Published: over 3 years ago

10.3389/fneur.2020.00641

Exome Sequencing Reveals Signal Transduction Genes Involved in Impulse Control Disorders in Parkinson's Disease
Cited by: 3
Author(s): Sabine Prud'hon, Samir Bekadar, Agnès Rastetter, Justine Guégan, Florence Cormier‐Dequaire, Lucette Lacomblez, Graziella Mangone, Hana You, Maïlys Daniau, Yannick Marie, Hélène Bertrand, Suzanne Lesage, Sophie Tezenas du Montcel, Mathieu Anheim, Alexis Brice, Fabrice Danjou, Jean‐Christophe Corvol
Software Mentions: 1
Published: over 4 years ago

Projects: cran: SKAT

Papers Mentioning SKAT 407