Ecosyste.ms: Papers

10.1080/14756366.2020.1712595

Deciphering the enzymatic target of a new family of antischistosomal agents bearing a quinazoline scaffold using complementary computational tools
Cited by: 2
Author(s): Víctor Sebastián-Pérez, Alfonso García‐Rubia, Sayed H. Seif el-Din, Abdel-Nasser A. Sabra, Naglaa M. El-Lakkany, Samia William, Tom L. Blundell, Louis Maes, Ana Martı́nez, Nuria E. Campillo, Sanaa S. Botros, Carmen Gil
Software Mentions: 1
Published: almost 5 years ago

10.1093/jxb/erv513

Transcriptomic and anatomical complexity of primary, seminal, and crown roots highlight root type-specific functional diversity in maize (<i>Zea mays</i>L.)
Cited by: 64
Author(s): Huanhuan Tai, Xin Lü, Nina Opitz, Caroline Marcon, Anja Paschold, Andrew Lithio, Dan Nettleton, Frank Hochholdinger
Software Mentions: 1
Published: almost 9 years ago

10.1093/jxb/erx294

Persulfidation proteome reveals the regulation of protein function by hydrogen sulfide in diverse biological processes in Arabidopsis
Cited by: 213
Author(s): Ángeles Aroca, Juan M. Benito, Cecilia Gotor, Luís C. Romero
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.ppat.1003221

Trichoderma-Plant Root Colonization: Escaping Early Plant Defense Responses and Activation of the Antioxidant Machinery for Saline Stress Tolerance
Cited by: 250
Author(s): Yariv Brotman, Udi Landau, Álvaro Cuadros-Inostroza, Takayuki Tohge, Alisdair R. Fernie, I. Chet, Ada Viterbo, Lothar Willmitzer
Software Mentions: 1
Published: over 11 years ago

10.1177/24725552211019405

Application of a High-Content Screening Assay Utilizing Primary Human Lung Fibroblasts to Identify Antifibrotic Drugs for Rapid Repurposing in COVID-19 Patients
Cited by: 3
Author(s): John A. Marwick, Richard Elliott, James Longden, Ashraff Makda, Nik Hirani, Kevin Dhaliwal, John C. Dawson, Neil O. Carragher
Software Mentions: 1
Published: about 3 years ago

10.1155/2016/6378137

Drug Repurposing Is a New Opportunity for Developing Drugs against Neuropsychiatric Disorders
Cited by: 45
Author(s): Hyeong-Min Lee, Yuna Kim
Software Mentions: 1
Published: almost 9 years ago

10.1126/sciadv.aav9810

Rational discovery of antimetastatic agents targeting the intrinsically disordered region of MBD2
Cited by: 20
Author(s): Min Young Kim, Insung Na, Ji Sook Kim, Sang Jun Son, Sungwoo Choi, Seol Eui Lee, Ji Hun Kim, Kiseok Jang, Gil Alterovitz, Yu Chen, Arjan van der Vaart, Hyung‐Sik Won, Vladimir N. Uversky, Chul Geun Kim
Software Mentions: 1
Published: about 5 years ago

10.1038/s41597-021-00975-y

Spanish electoral archive. SEA database
Cited by: 2
Author(s): Virgilio Pérez, Cristina Aybar, José M. Pavía
Software Mentions: 1
Published: over 3 years ago

10.1038/srep11970

Large-scale Direct Targeting for Drug Repositioning and Discovery
Cited by: 63
Author(s): Chunli Zheng, Zihu Guo, Chao Huang, Ziyin Wu, Yan Li, Xuetong Chen, Yingxue Fu, Jinlong Ru, Piar Ali Shar, Yuan Wang
Software Mentions: 1
Published: over 9 years ago

10.1038/srep27396

Penicimenolides A-F, Resorcylic Acid Lactones from Penicillium sp., isolated from the Rhizosphere Soil of Panax notoginseng
Cited by: 19
Author(s): Yanan An, Xue Zhang, Tianyuan Zhang, Mengyue Zhang, Qian-Zhang, Xiaoyu Deng, Feng Zhao, Lingjuan Zhu, Guan Wang, Jie Zhang, Yixuan Zhang, Bo Liu, Xin‐Sheng Yao
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-01536-3

Identifying disease-associated pathways in one-phenotype data based on reversal gene expression orderings
Cited by: 5
Author(s): Hong Guan, Hongdong Li, Jiahui Zhang, Qingzhou Guan, Rou Chen, Zheng Guo
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-02827-5

Establishment of the model system between phytochemicals and gene expression profiles in Macrosclereid cells of Medicago truncatula
Cited by: 13
Author(s): Fuyou Fu, Wentao Zhang, Yuanyuan Li, Hong Li Wang
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-12082-3

Pharmacological use of a novel scaffold, anomeric N,N-diarylamino tetrahydropyran: molecular similarity search, chemocentric target profiling, and experimental evidence
Cited by: 17
Author(s): A. Venkanna, Oh Wook Kwon, Sualiha Afzal, Cheongyun Jang, Kyo Hee Cho, Dharmendra Kumar Yadav, Kang Kim, Hyeung‐geun Park, Kukjin Chun, Sun Yeou Kim, Mi‐Hyun Kim
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-16258-9

A small molecule screen to identify regulators of let-7 targets
Cited by: 10
Author(s): Jessica Cinkornpumin, Martina Roos, Liem H. Nguyen, Xiaoguang Liu, Xavier Gaeta, Shuibin Lin, David Chan, A. Liu, Richard I. Gregory, Mina Jung, John P. Chute, Hao Zhu, William E. Lowry
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-18332-8

Structural ensemble-based docking simulation and biophysical studies discovered new inhibitors of Hsp90 N-terminal domain
Cited by: 9
Author(s): Hyun-Hwi Kim, Ja-Shil Hyun, Joonhyeok Choi, Kwang-Eun Choi, Jun-Goo Jee, Sung Jean Park
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-29764-1

A network pharmacology-based approach to analyse potential targets of traditional herbal formulas: An example of Yu Ping Feng decoction
Cited by: 53
Author(s): Huali Zuo, Qianru Zhang, Shi‐Bing Su, Qilong Chen, Feng‐Qing Yang, Hu Y
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-57199-9

Combined network pharmacology and virtual reverse pharmacology approaches for identification of potential targets to treat vascular dementia
Cited by: 14
Author(s): Alexey Lagunin, Sergey Ivanov, Tatyana A. Gloriozova, Pavel V. Pogodin, Dmitry Filimonov, Sandeep Kumar, Rajesh Kumar Goel
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-59074-4

The kinase polypharmacology landscape of clinical PARP inhibitors
Cited by: 64
Author(s): Albert A. Antolín, Malaka Ameratunga, Udai Banerji, Paul A. Clarke, Paul Workman, Bissan Al‐Lazikani
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-70493-1

Identification and characterization of plant-derived alkaloids, corydine and corydaline, as novel mu opioid receptor agonists
Cited by: 17
Author(s): Teresa Kaserer, Theresa Steinacher, Roman Kainhofer, Filippo Erli, Sonja Sturm, Birgit Waltenberger, Daniela Schuster, Mariana Spetea
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-89035-4

Elucidating direct kinase targets of compound Danshen dropping pills employing archived data and prediction models
Cited by: 5
Author(s): Tongxing Wang, Lu Liang, Chun-Lai Zhao, Jia Sun, Hairong Wang, Wenjia Wang, Jianping Lin, Yunhui Hu
Software Mentions: 1
Published: over 3 years ago

10.1155/2015/235810

Fast Adapting Ensemble: A New Algorithm for Mining Data Streams with Concept Drift
Cited by: 15
Author(s): Agustín Ortiz Diaz, José del Campo-Ávila, Gonzalo Ramos-Jiménez, Isvani Frías Blanco, Yailé Caballero Mota, Antonio Mustelier Hechavarría, Rafael Morales-Bueno
Software Mentions: 1
Published: almost 10 years ago

10.3390/s150511511

Design of a Novel Telerehabilitation System with a Force-Sensing Mechanism
Cited by: 48
Author(s): Songyuan Zhang, Shuxiang Guo, Baofeng Gao, Hideyuki Hirata, Hidenori Ishihara
Software Mentions: 1
Published: over 9 years ago

10.1007/s13280-019-01279-7

Marine nature conservation and conflicts with fisheries
Cited by: 22
Author(s): Kjell Grip, Sven Blomqvist
Software Mentions: 1
Published: about 5 years ago

10.1007/s10712-017-9425-3

New Insights on Mt. Etna’s Crust and Relationship with the Regional Tectonic Framework from Joint Active and Passive P-Wave Seismic Tomography
Cited by: 21
Author(s): Alejandro Díaz‐Moreno, G. Barberi, O. Cocina, Ivan Koulakov, L. Scarfì, Luciano Zuccarello, Janire Prudencio, Araceli García-Yeguas, Isaac Álvarez, Luz García, Jesús M. Ibáñez
Software Mentions: 1
Published: about 7 years ago

10.7150/thno.47413

Salidroside can target both P4HB-mediated inflammation and melanogenesis of the skin
Cited by: 28
Author(s): Xiujuan Ding, Zhiyuan Zhang, Jing Jin, Jing Han, Yan Wang, Kai Yang, Yankun Yang, Hongqi Wang, Xintong Dai, Cheng Wen Yao, Tao Sun, Caibin Zhu, Huijuan Liu
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12960-017-0246-8

One Health/EcoHealth capacity building programs in South and South East Asia: a mixed method rapid systematic review
Cited by: 9
Author(s): Pranab Chatterjee, Abhimanyu Singh Chauhan, Jessy Joseph, Manish Kakkar
Software Mentions: 1
Published: about 7 years ago

10.1186/s13033-020-00352-z

Implementing civic engagement within mental health services in South East Asia: a systematic review and realist synthesis of current evidence
Cited by: 7
Author(s): Karen James, Helen Brooks, Herni Susanti, Jessica Waddingham, Irman Irmansyah, Budi Anna Keliat, Bagus Wahyu Utomo, Diana Rose, Erminia Colucci, Karina Lovell
Software Mentions: 1
Published: over 4 years ago

10.3892/ijmm.2013.1563

Thymoquinone regulates gene expression levels in the estrogen metabolic and interferon pathways in MCF7 breast cancer cells
Cited by: 38
Author(s): Marjaneh Motaghed, Faisal Muti Al-Hassan, Shahrul Bariyah Sahul Hamid
Software Mentions: 1
Published: about 11 years ago

10.3390/ijerph16152729

Land Subsidence Control Zone and Policy for the Environmental Protection of Shanghai
Cited by: 21
Author(s): Xi-Cun He, Tianliang Yang, Shui‐Long Shen, Ye‐Shuang Xu, Arul Arulrajah
Software Mentions: 1
Published: over 5 years ago

10.3390/ijerph18136817

Regional Features of Long-Term Exposure to PM2.5 Air Quality over Asia under SSP Scenarios Based on CMIP6 Models
Cited by: 8
Author(s): Sungbo Shim, Hyun-Min Sung, Sang-Hoon Kwon, Jisun Kim, Jaehee Lee, Min-Ah Sun, Jaeyoung Song, Jong-Chul Ha, Young‐Hwa Byun, Yeon-Hee Kim, Steven T. Turnock, David S. Stevenson, Robert J. Allen, Fiona M. O’Connor, J. Teixeira, J. Williams, Ben Johnson, James Keeble, Jane Mulcahy, Guang Zeng
Software Mentions: 1
Published: over 3 years ago

10.7554/eLife.40580

Estimating the burden of α-thalassaemia in Thailand using a comprehensive prevalence database for Southeast Asia
Cited by: 14
Author(s): Carinna Hockham, Supachai Ekwattanakit, Samir Bhatt, Bridget S. Penman, Sunetra Gupta, Vip Viprakasit, Frédéric B. Piel
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.05920

The kinase DYRK1A reciprocally regulates the differentiation of Th17 and regulatory T cells
Cited by: 45
Author(s): Bernard Khor, John D. Gagnon, Gautam Goel, Marly I. Roche, Kara L. Conway, Khoa Tran, Leslie N. Aldrich, Thomas B. Sundberg, Alison M. Paterson, Scott Mordecai, David Dombkowski, Melanie Schirmer, Pauline H. Tan, Atul K. Bhan, Rahul Roychoudhuri, Nicholas P. Restifo, John J. O’Shea, Benjamin D. Medoff, Alykhan F. Shamji, Stuart L. Schreiber, Arlene H. Sharpe, Stanley Y. Shaw, Ramnik J. Xavier
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms20010195

Zhile Capsule Exerts Antidepressant-Like Effects through Upregulation of the BDNF Signaling Pathway and Neuroprotection
Cited by: 5
Author(s): Jiawei Wu, Tingting Zhang, Luping Yu, Shuai Huang, Yang Yu, Suyun Yu, Jun Li, Yuzhu Cao, Zhonghong Wei, Xiaoman Li, Yuanyuan Wu, Wenxing Chen, Aiyun Wang, Yin Lu
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms20235916

Trypanocidal Mechanism of Action and in silico Studies of p-Coumaric Acid Derivatives
Cited by: 24
Author(s): Susiany P. Lopes, Yunierkis P. Castillo, Marília Lopes Monteiro, Ramón Róseo Paula Pessoa Bezerra de Menezes, Reinaldo Nóbrega de Almeida, Alice Maria Costa Martins, Damião Pergentino de Sousa
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms21051766

A Network-Based Approach to Explore the Mechanisms of Uncaria Alkaloids in Treating Hypertension and Alleviating Alzheimer’s Disease
Cited by: 21
Author(s): Wenyong Wu, Zijia Zhang, Feifei Li, Yanping Deng, Min Lei, Huali Long, Jinjun Hou, Wanying Wu
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22073314

Insights into the Role of Transcriptional Gene Silencing in Response to Herbicide-Treatments in Arabidopsis thaliana
Cited by: 10
Author(s): Catarine Markus, Aleš Pečinka, Aldo Merotto
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms22179372

Network Pharmacology Study on Morus alba L. Leaves: Pivotal Functions of Bioactives on RAS Signaling Pathway and Its Associated Target Proteins against Gout
Cited by: 6
Author(s): Ki‐Kwang Oh, Md. Adnan, Dong Ha Cho
Software Mentions: 1
Published: about 3 years ago

10.1016/j.isci.2019.10.050

Targeted Drug-Loaded Chemical Probe Staining Assay to Predict Therapy Response and Function as an Independent Pathological Marker
Cited by: 1
Author(s): Heng Zhang, Weilong Zhong, Bo Sun, Guang Yang, Yanrong Liu, Bijiao Zhou, Xin Chen, Xiangyan Jing, Longcong Huai, Ning Liu, Zhiyuan Zhang, Mi-Mi Li, Jing Han, Kun Qiao, Jing Meng, Honggang Zhou, Shuang Chen, Cheng Yang, Tao Sun
Software Mentions: 1
Published: about 5 years ago

10.1155/2012/814987

Fetal Vibroacoustic Stimulation in Computerized Cardiotocographic Analysis: The Role of Short-Term Variability and Approximate Entropy
Cited by: 8
Author(s): Maria Laura Annunziata, Maria Rosaria Scala, Natascia Giuliano, Salvatore Tagliaferri, Olga Carmela Maria Imperato, Francesca Esposito, Marta Campanile, Andrea Di Lieto
Software Mentions: 1
Published: almost 13 years ago

10.1186/1750-1172-5-13

α-thalassaemia
Cited by: 359
Author(s): Cornelis L. Harteveld, Douglas R. Higgs
Software Mentions: 1
Published: over 14 years ago

10.1155/2020/5780703

Network Pharmacology Analysis and Molecular Characterization of the Herbal Medicine Formulation Qi-Fu-Yin for the Inhibition of the Neuroinflammatory Biomarker iNOS in Microglial BV-2 Cells: Implication for the Treatment of Alzheimer’s Disease
Cited by: 7
Author(s): Fung Yin Ngo, Weiwei Wang, Qilei Chen, Jia Zhao, Hubiao Chen, Jin Gao, Jianhui Rong
Software Mentions: 1
Published: about 4 years ago

10.1155/2020/8870656

Differences in the Hemolytic Behavior of Two Isomers in Ophiopogon japonicus In Vitro and In Vivo and Their Risk Warnings
Cited by: 2
Author(s): Huan-Hua Xu, Zhenhong Jiang, Yi Sun, Li-Zhen Qiu, Long-Long Xu, Xiao‐Qing Tang, Zhongliang Ma, Yue Gao
Software Mentions: 1
Published: almost 4 years ago

10.1186/s40064-016-3054-z

Multi-objective flexible job-shop scheduling problem using modified discrete particle swarm optimization
Cited by: 37
Author(s): Song Huang, Naishuo Tian, Yan Wang, Zhicheng Ji
Software Mentions: 1
Published: about 8 years ago

10.1007/s13280-019-01285-9

Socio-economic analysis in REACH restriction dossiers for chemicals management: A critical review
Cited by: 5
Author(s): Silke Gabbert, Isabel Hilber
Software Mentions: 1
Published: almost 5 years ago

10.1128/AAC.02484-19

Experimentally Engineered Mutations in a Ubiquitin Hydrolase, UBP-1, Modulate <i>In Vivo</i> Susceptibility to Artemisinin and Chloroquine in Plasmodium berghei
Cited by: 15
Author(s): Nelson V. Simwela, Katie R. Hughes, A. Roberts, Michael T Rennie, Michael P. Barrett, Andrew P. Waters
Software Mentions: 1
Published: over 4 years ago

10.1186/1471-2105-15-210

Exploiting large-scale drug-protein interaction information for computational drug repurposing
Cited by: 18
Author(s): Ruifeng Liu, Narender Singh, Gregory J. Tawa, Anders Wallqvist, Jaques Reifman
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2105-5-98

Cited by: 13
Author(s): Dariusz Plewczynski, Leszek Rychlewski, Yuzhen Ye, Lukasz Jaroszewski, Adam Godzik
Software Mentions: 1
Published: almost 21 years ago

10.1186/1472-6882-14-430

A novel systems pharmacology model for herbal medicine injection: a case using reduning injection
Cited by: 51
Author(s): Huabo Yang, Wenjuan Zhang, Chao Huang, Wei Zhou, Yao Yao, Zhenzhong Wang, Yan Li, Wei Xiao, Yonghua Wang
Software Mentions: 1
Published: about 10 years ago

10.1186/1471-2164-13-294

Identification of genes specifically or preferentially expressed in maize silk reveals similarity and diversity in transcript abundance of different dry stigmas
Cited by: 31
Author(s): Xiao Hui Xu, Hao Chen, Ya Lin Sang, Fang Wang, Jun Ping, Xin-Qi Gao, Xian Sheng Zhang
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-15-399

The large-scale investigation of gene expression in Leymus chinensis stigmas provides a valuable resource for understanding the mechanisms of poaceae self-incompatibility
Cited by: 22
Author(s): Quan Zhou, Junjie Jia, Xing Huang, Xiaohong Yan, Long Cheng, Shuangyan Chen, Xiaoxia Li, Xianjun Peng, Gongshe Liu
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12874-020-01132-6

When complexity matters: a step-by-step guide to incorporating a complexity perspective in guideline development for public health and health system interventions
Cited by: 6
Author(s): Ani Movsisyan, Eva Rehfuess, Susan L. Norris
Software Mentions: 1
Published: about 4 years ago

10.1186/s12883-021-02042-w

Bibliometric analysis of bacterial central nervous system infection research in Southeast Asia
Cited by: 13
Author(s): Francis Gerwin U. Jalipa, Marie Charmaine C. Sy, Adrian I. Espiritu, Roland Dominic G. Jamora
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12870-017-1035-1

Ethephon induced oxidative stress in the olive leaf abscission zone enables development of a selective abscission compound
Cited by: 29
Author(s): Shiri Goldental-Cohen, C. Burstein, Iris Biton, S. Ben Sasson, Asaf Sadeh, Yair Many, Adi Doron‐Faigenboim, Hanita Zemach, Y. Mugira, Doron Schneider, R. Birger, Shimon Meir, Sonia Philosoph‐Hadas, V. Irihomovitch, S. Lavee, Benjamin Avidan, Giora Ben-Ari
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2229-14-110

Differential proteomic analysis of grapevine leaves by iTRAQ reveals responses to heat stress and subsequent recovery
Cited by: 104
Author(s): Guotian Liu, Lifeng Ma, Wei Duan, Baichen Wang, Jihu Li, Huawei Xu, Xiaohong Yan, Bofang Yan, Shaohua Li, Lijun Wang
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2229-12-15

The role of the Arabidopsis FUSCA3transcription factor during inhibition of seed germination at high temperature
Cited by: 74
Author(s): Rex Shun Chiu, Hardeep Nahal, Nicholas J. Provart, Sonia Gazzarrini
Software Mentions: 1
Published: almost 13 years ago

10.1186/s12870-015-0492-7

Dissection of the style’s response to pollination using transcriptome profiling in self-compatible (Solanum pimpinellifolium) and self-incompatible (Solanum chilense) tomato species
Cited by: 15
Author(s): Panfeng Zhao, Lida Zhang, Lingxia Zhao
Software Mentions: 1
Published: over 9 years ago

10.1186/s12889-020-08576-x

Process evaluation of a whole-of-community systems approach to address childhood obesity in western Victoria, Australia
Cited by: 18
Author(s): E. Lynn Jenkins, Janette Lowe, Steven Allender, Kristy A. Bolton
Software Mentions: 1
Published: over 4 years ago

10.1136/bmjopen-2017-020756

Does practice analysis agree with the ambulatory care sensitive conditions’ list of avoidable unplanned admissions?: a cross-sectional study in the East of England
Cited by: 8
Author(s): Robert Fleetcroft, Antonia C Hardcastle, Nicholas Steel, Gill M Price, Sarah Purdy, Alistair Lipp, Phyo Kyaw Myint, Amanda Howe
Software Mentions: 1
Published: over 6 years ago

10.3762/bjnano.8.108

Optical response of heterogeneous polymer layers containing silver nanostructures
Cited by: 3
Author(s): Miriam Carlberg, Florent Pourcin, Olivier Margeat, Judikaël Le Rouzo, Gérard Berginc, Rose-Marie Sauvage, Jörg Ackermann, Ludovic Escoubas
Software Mentions: 1
Published: over 7 years ago

10.1016/j.bcp.2013.02.026

Chemical informatics uncovers a new role for moexipril as a novel inhibitor of cAMP phosphodiesterase-4 (PDE4)
Cited by: 18
Author(s): Ryan T. Cameron, Ryan G. Coleman, Jon P. Day, Krishna C. Yalla, Miles D. Houslay, David H. Adams, Brian K. Shoichet, George S. Baillie
Software Mentions: 1
Published: over 11 years ago

10.1186/s13062-020-00288-x

An ensemble learning approach for modeling the systems biology of drug-induced injury
Cited by: 10
Author(s): Joaquim Aguirre‐Plans, Janet Piñero, Terezinha de Souza, Giulia Callegaro, Steven J. Kunnen, Ferrán Sanz, Narcís Fernández-Fuentes, Laura I. Furlong, Emre Güney, Baldo Oliva
Software Mentions: 1
Published: almost 4 years ago

10.3390/biology8040075

Development of a Novel Quinoline Derivative as a P-Glycoprotein Inhibitor to Reverse Multidrug Resistance in Cancer Cells
Cited by: 4
Author(s): Yuanyuan Zhou, Po-yee Chung, Jessica Yuen Wuen, Alfred King-Yin Lam, Simon Law, Kwok‐Wah Chan, Albert S. C. Chan, Xingshu Li, Kim Hung Lam, Chung‐Hin Chui, Johnny Tang
Software Mentions: 1
Published: about 5 years ago

10.3390/biom10111570

Identification and Validation of Carbonic Anhydrase II as the First Target of the Anti-Inflammatory Drug Actarit
Cited by: 3
Author(s): Ghita Ghislat, Taufiq Rahman, Pedro J. Ballester
Software Mentions: 1
Published: about 4 years ago

10.1093/bib/bbaa115

Dr <i>AFC</i>: drug repositioning through anti-fibrosis characteristic
Cited by: 4
Author(s): Dingfeng Wu, Wenxing Gao, Xiaoyi Li, Chuan Tian, Na Jiao, Sa Fang, Jing Xiao, Zhifeng Xu, Lixin Zhu, Guoqing Zhang, Rong Zhu
Software Mentions: 1
Published: over 4 years ago

10.1093/bib/bbz026

Validation strategies for target prediction methods
Cited by: 34
Author(s): Neann Mathai, Chen Ya, Johannes Kirchmair
Software Mentions: 1
Published: over 5 years ago

10.1016/j.lanwpc.2020.100084

An analysis of national action plans on antimicrobial resistance in Southeast Asia using a governance framework approach
Cited by: 48
Author(s): Alvin Qijia Chua, Monica Verma, Li Yang Hsu, Helena Legido‐Quigley
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12936-019-2701-6

K13-propeller gene polymorphisms in Plasmodium falciparum parasite population in malaria affected countries: a systematic review of prevalence and risk factors
Cited by: 30
Author(s): Moses Ocan, Dickens Akena, Sam Nsobya, Moses R. Kamya, Richard Senono, Alison Annet Kinengyere, Ekwaro A. Obuku
Software Mentions: 1
Published: over 5 years ago

10.1155/2020/2929163

Relieving Sore Throat Formula Exerts a Therapeutic Effect on Pharyngitis through Immunoregulation and NF-<i>κ</i>B Pathway
Cited by: 5
Author(s): Yushi Ding, Suyun Yu, Zhonghong Wei, Rui Deng, Peng Chen, Yifan Sun, Qi Jia, Xiaoman Li, Yuanyuan Wu, Wenxing Chen, Kurt S. Zänker, Aiyun Wang, Yin Lu
Software Mentions: 1
Published: over 4 years ago

10.1007/s11306-014-0734-y

MarVis-Pathway: integrative and exploratory pathway analysis of non-targeted metabolomics data
Cited by: 62
Author(s): Alexander Kaever, Manuel Landesfeind, Kirstin Feussner, Alina Mosblech, Ingo Heilmann, Burkhard Morgenstern, Ivo Feußner, Peter Meinicke
Software Mentions: 1
Published: about 10 years ago

10.1128/MRA.00160-20

Complete Genome Sequences of Cluster G Mycobacteriophage Darionha, Cluster A Mycobacteriophage Salz, and Cluster J Mycobacteriophage ThreeRngTarjay
Cited by: 1
Author(s): Andrea Sandoval, Amber M. Abram, Zahraa M. Alhabib, Angelina S. Antonyan, Salar M. Brikho, Sarah I. Buhay, Griffin E. Craig, Karen G. Crile, Nour El Yaman, Lizbeth Garcia-Leon, Zahraa B. Hammoud, Anthony Huffman, Ali H. Issa, Alexander B. Jackman, Victoria K. Krajcz, Yamiya J. Lloyd, Marcel L. Jones, Diana L. McMahon, Briana A. D. Murdock, Jada J. Nelson, Tulsi T. Patel, Yashodhara V. Patil, Sabriyyah A. Ricketts, Leonardo S. Romero-Barajas, Laila H. Sareini, Channing Sesoko, Marcelio A. Shammami, Erin E. Sheardy, John R. Sherwood, Arren E. Simpson, Racha H. Tiba, Stephanie B. Conant, Jonathan S. Finkel, Jacob D. Kagey
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules25081883

Target Identification Using Homopharma and Network-Based Methods for Predicting Compounds Against Dengue Virus-Infected Cells
Cited by: 4
Author(s): Kowit Hengphasatporn, Kitiporn Plaimas, Apichat Suratanee, Peemapat Wongsriphisant, Jinn-Moon Yang, Yasuteru Shigeta, Warinthorn Chavasiri, Siwaporn Boonyasuppayakorn, Thanyada Rungrotmongkol
Software Mentions: 1
Published: over 4 years ago

10.1186/1743-422X-9-101

Comparative analysis of microarray data in Arabidopsis transcriptome during compatible interactions with plant viruses
Cited by: 54
Author(s): Olga A. Postnikova, Lev G. Nemchinov
Software Mentions: 1
Published: over 12 years ago

10.3390/pathogens10070821

Rhipicephalus Tick: A Contextual Review for Southeast Asia
Cited by: 8
Author(s): Li Tan, Ruhil Hayati Hamdan, Basripuzi Nurul Hayyan Hassan, Mohd Farhan Hanif Reduan, Ibrahim Abdul-Azeez Okene, Shih Keng Loong, Jing Jing Khoo, Samsuddin Ahmad Syazwan, Seng Hua Lee
Software Mentions: 1
Published: over 3 years ago

10.7717/peerj.184

Gooseneck barnacles (<i>Lepas</i>spp.) ingest microplastic debris in the North Pacific Subtropical Gyre
Cited by: 169
Author(s): Miriam C. Goldstein, Deborah S. Goodwin
Software Mentions: 1
Published: about 11 years ago

10.7717/peerj-cs.633

Dynamic sampling of images from various categories for classification based incremental deep learning in fog computing
Cited by: 0
Author(s): Swaraj Dube, Yee Wan Wong, Hanung Adi Nugroho
Software Mentions: 1
Published: over 3 years ago

10.1098/rstb.2015.0168

Multiscale perspectives of fire, climate and humans in western North America and the Jemez Mountains, USA
Cited by: 75
Author(s): Thomas W. Swetnam, Joshua Farella, Christopher I. Roos, Matthew Liebmann, Donald A. Falk, Craig D. Allen
Software Mentions: 1
Published: over 8 years ago

10.1007/s00299-017-2194-0

Transcriptome and phytohormone analysis reveals a comprehensive phytohormone and pathogen defence response in pear self-/cross-pollination
Cited by: 26
Author(s): Dongqing Shi, Chao Tang, Runze Wang, Chao Gu, Xiao Wu, Huanzhi Shi, Jian Jin, Shaoling Zhang
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pbio.1001712

In Silico Molecular Comparisons of C. elegans and Mammalian Pharmacology Identify Distinct Targets That Regulate Feeding
Cited by: 17
Author(s): George A. Lemieux, Michael J. Keiser, Maria F. Sassano, Christian Laggner, Fahima Mayer, Roland J. Bainton, Zena Werb, Bryan L. Roth, Brian K. Shoichet, Kaveh Ashrafi
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pcbi.1006752

Drug combination sensitivity scoring facilitates the discovery of synergistic and efficacious drug combinations in cancer
Cited by: 93
Author(s): Alina Malyutina, Muntasir Mamun Majumder, Wenyu Wang, Alberto Pessia, Caroline A. Heckman, Jing Tang
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1000474

A Mapping of Drug Space from the Viewpoint of Small Molecule Metabolism
Cited by: 31
Author(s): James Corey Adams, Michael J. Keiser, Li Basuino, Henry F. Chambers, Deok-Sun Lee, Olaf Wiest, Patricia C. Babbitt
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pcbi.1005522

Detecting similar binding pockets to enable systems polypharmacology
Cited by: 33
Author(s): Miquel Duran‐Frigola, Lydia Siragusa, Eytan Ruppin, Xavier Barril, Gabriele Cruciani, Patrick Aloy
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pgen.1002208

Quantitative and Qualitative Stem Rust Resistance Factors in Barley Are Associated with Transcriptional Suppression of Defense Regulons
Cited by: 51
Author(s): Matthew J. Moscou, Nick Lauter, Brian J. Steffenson, Roger P. Wise
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pgen.1007182

Ovule identity mediated by pre-mRNA processing in Arabidopsis
Cited by: 13
Author(s): Encarnación Rodríguez-Cazorla, Samanta Ortuño-Miquel, Héctor Candela, Lindsay J. Bailey-Steinitz, Martin F. Yanofsky, Antonio Martínez‐Laborda, Juan-José Ripoll, Antonio Vera
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pntd.0001736

Diverse Inhibitor Chemotypes Targeting Trypanosoma cruzi CYP51
Cited by: 52
Author(s): Shamila S. Gunatilleke, Cláudia M. Calvet, Jonathan B. Johnston, Chiung-Kuang Chen, Grigori Erenburg, Jiří Gut, Juan C. Engel, Kenny Kean‐Hooi Ang, Joseph Mulvaney, Steven Chen, Michelle R. Arkin, James H. McKerrow, L.M. Podust
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0012480

Fire, Fuel Composition and Resilience Threshold in Subalpine Ecosystem
Cited by: 51
Author(s): Olivier Blarquez, Christopher Carcaillet
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0150602

In Vitro and In Vivo Characterization of the Alkaloid Nuciferine
Cited by: 25
Author(s): Martilias S. Farrell, John D. McCorvy, Xi Ping Huang, Daniel J. Urban, Kate L. White, Patrick M. Giguère, Allison K. Doak, Alison I. Bernstein, Kristen A. Stout, Su Mi Park, Ramona M. Rodriguiz, Bradley W. Gray, William S. Hyatt, Andrew P. Norwood, Kevin A. Webster, Brenda M. Gannon, Gary W. Miller, Joseph H. Porter, Brian K. Shoichet, William E. Fantegrossi, William C. Wetsel, Bryan L. Roth
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0121492

Mycobacterial Dihydrofolate Reductase Inhibitors Identified Using Chemogenomic Methods and In Vitro Validation
Cited by: 40
Author(s): Grace Mugumbate, Katherine A. Abrahams, Jonathan Cox, George Papadatos, Gerard J. P. van Westen, Jöel Lelièvre, Szymon T. Calus, Nicholas J. Loman, Lluís Ballell, David Barros, John P. Overington, Gurdyal S. Besra
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0149669

Beyond Attributable Burden: Estimating the Avoidable Burden of Disease Associated with Household Air Pollution
Cited by: 16
Author(s): Randall Kuhn, Dale S. Rothman, Sara Turner, José R. Solórzano, Barry B. Hughes
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0084510

A Linear Combination of Pharmacophore Hypotheses as a New Tool in Search of New Active Compounds – An Application for 5-HT1A Receptor Ligands
Cited by: 33
Author(s): Dawid Warszycki, Stefan Mordalski, Kurt Kristiansen, Rafał Kafel, Ingebrigt Sylte, Zdzisław Chilmończyk, Andrzej J. Bojarski
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0160061

Linear Energy Transfer-Dependent Change in Rice Gene Expression Profile after Heavy-Ion Beam Irradiation
Cited by: 8
Author(s): Kotaro Ishii, Yusuke Kazama, Ryouhei Morita, Tomonari Hirano, Tokihiro Ikeda, Sachiko Usuda, Yasuhiro Hayashi, Sumie Ohbu, Ritsuko Motoyama, Yoshiaki Nagamura, Tomoko Abe
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0130055

In silico Analysis and Experimental Validation of Lignan Extracts from Kadsura longipedunculata for Potential 5-HT1AR Agonists
Cited by: 10
Author(s): Yaxin Zheng, Jiming Wu, Xuesong Feng, Ying Jia, Jian Huang, Zhihui Hao, Songyan Zhao, Jinhui Wang
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0237143

Gene expression regulated by abatacept associated with methotrexate and correlation with disease activity in rheumatoid arthritis
Cited by: 3
Author(s): Céline Derambure, Gaëlle Dzangué-Tchoupou, Maria Antonietta D'Agostino, Thierry Lequerré, Olivier Vittecoq
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0080020

Scales of Spatial Heterogeneity of Plastic Marine Debris in the Northeast Pacific Ocean
Cited by: 186
Author(s): Miriam C. Goldstein, Andrew J. Titmus, Michael Ford
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0077635

Tuberculosis Transmission among Immigrants and Autochthonous Populations of the Eastern Province of Saudi Arabia
Cited by: 24
Author(s): Bright Varghese, Philip Supply, Mohammed Shoukri, Caroline Allix‐Béguec, Ziad A. Memish, Naila Abuljadayel, Raafat F. Alhakeem, Fahad Alrabiah, Sahal Al‐Hajoj
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0018867

Consensus Pathways Implicated in Prognosis of Colorectal Cancer Identified Through Systematic Enrichment Analysis of Gene Expression Profiling Studies
Cited by: 32
Author(s): Jesús Lascorz, Bowang Chen, Kari Hemminki, Asta Försti
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0103292

Wnt Pathway Activation Increases Hypoxia Tolerance during Development
Cited by: 7
Author(s): Merril Gersten, Dan Zhou, Priti Azad, Gabriel G. Haddad, Shankar Subramaniam
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0052064

Investigating Cultural Evolution Using Phylogenetic Analysis: The Origins and Descent of the Southeast Asian Tradition of Warp Ikat Weaving
Cited by: 36
Author(s): Christopher D. Buckley
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0166994

Associations between a Genetic Risk Score for Clinical CAD and Early Stage Lesions in the Coronary Artery and the Aorta
Cited by: 2
Author(s): Elias Salfati, David M. Herrington, Themistocles L. Assimes
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0096404

Gene Expression Profile and Toxic Effects in Human Bronchial Epithelial Cells Exposed to Zearalenone
Cited by: 44
Author(s): Mei Yu So, Zhipeng Tian, Yong Shian Phoon, Sha Sha, Michael Antoniou, Jiangwen Zhang, Rongben Wu, KC Tan-Un
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0240873

Network pharmacology of bioactives from Sorghum bicolor with targets related to diabetes mellitus
Cited by: 24
Author(s): Ki‐Kwang Oh, Md. Adnan, Dong Ha Cho
Software Mentions: 1
Published: almost 4 years ago