cran: SAM | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0065912

Characterization of a Novel Putative S-Adenosylmethionine Decarboxylase-Like Protein from Leishmania donovani
Cited by: 4
Author(s): Saurabh Singh, Pragati Agnihotri, J. Venkatesh Pratap
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0179793

Characterization of human FCRL4-positive B cells
Cited by: 15
Author(s): Michel Jourdan, Robert Naeije, Maïlys Cren, Coraline Thibaut, Christophe Duperray, Alboukadel Kassambara, Michel Cogné, Karin Tarte, Bernard Klein, Jérôme Moreaux
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0004835

Graveyards on the Move: The Spatio-Temporal Distribution of Dead Ophiocordyceps-Infected Ants
Cited by: 82
Author(s): Maj-Britt Pontoppidan, Winanda Himaman, Nigel L. Hywel‐Jones, Jacobus J. Boomsma, David Hughes
Software Mentions: 1
Published: over 17 years ago

10.1371/journal.pone.0039547

Berry Flesh and Skin Ripening Features in Vitis vinifera as Assessed by Transcriptional Profiling
Cited by: 98
Author(s): Diego Lijavetzky, Pablo Carbonell‐Bejerano, Jérôme Grimplet, Gema Bravo, Pilar Flores, José Fenoll, Pilar Hellín, Juan Carlos Oliveros, José M. Martínez‐Zapater
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0186655

The fate of endemic insects of the Andean region under the effect of global warming
Cited by: 10
Author(s): Sara I. Montemayor, María Cecilia Melo, María Celeste Scattolini, Martina Eugenia Pocco, M. Guadalupe Del Río, Gimena Dellapé, Érica Elizabeth Scheibler, Sergio Alberto Roig, Carla G. Cazorla, Pablo Matías Dellapé
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0019144

Resistance of Renal Cell Carcinoma to Sorafenib Is Mediated by Potentially Reversible Gene Expression
Cited by: 68
Author(s): Liang Zhang, Manoj Bhasin, Rachel Schor-Bardach, Xiaoen Wang, Michael Collins, David J. Panka, Prabhakar Putheti, Sabina Signoretti, David C. Alsop, Towia A. Libermann, Michael B. Atkins, James W. Mier, S. Nahum Goldberg, Rupal S. Bhatt
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0096030

Follow-Up of Post-Discharge Growth and Mortality after Treatment for Severe Acute Malnutrition (FuSAM Study): A Prospective Cohort Study
Cited by: 132
Author(s): Marko Kerac, James Bunn, George Chagaluka, Paluku Bahwere, Andrew Tomkins, Steve Collins, Andrew Seal
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0121416

Adaptation and Transcriptome Analysis of Aureobasidium pullulans in Corncob Hydrolysate for Increased Inhibitor Tolerance to Malic Acid Production
Cited by: 24
Author(s): Xiang Zou, Yongkang Wang, Guangwei Tu, Zhanquan Zan, Xiaoyan Wu
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0020826

Why Is There a Lack of Consensus on Molecular Subgroups of Glioblastoma? Understanding the Nature of Biological and Statistical Variability in Glioblastoma Expression Data
Cited by: 17
Author(s): Nicholas F. Marko, John Quackenbush, Robert J. Weil
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0000441

Evidence that p53-Mediated Cell-Cycle-Arrest Inhibits Chemotherapeutic Treatment of Ovarian Carcinomas
Cited by: 56
Author(s): Carlos S. Moreno, Lilya V. Matyunina, Erin B. Dickerson, Nina Schubert, Nathan J. Bowen, Sanjay Logani, Benedict B. Benigno, John F. McDonald
Software Mentions: 1
Published: over 19 years ago

10.1371/journal.pone.0186830

Extension of biomass estimates to pre-assessment periods using density dependent surplus production approach
Cited by: 2
Author(s): Jan Horbowy, Maciej Tomczak
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0087251

Identification and Validation of miRNAs Associated with the Resistance of Maize (Zea mays L.) to Exserohilum turcicum
Cited by: 45
Author(s): Fuyong Wu, Jianhong Shu, Weibo Jin
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0083356

SoftSearch: Integration of Multiple Sequence Features to Identify Breakpoints of Structural Variations
Cited by: 37
Author(s): Steven N. Hart, Vivekananda Sarangi, Raymond M. Moore, Saurabh Baheti, Jaysheel Bhavsar, Fergus J. Couch, Jean Pierre A. Kocher
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0001734

Nonvirally Modified Autologous Primary Hepatocytes Correct Diabetes and Prevent Target Organ Injury in a Large Preclinical Model
Cited by: 22
Author(s): Nelson K. F. Chen, Jolin Wong, Irene Kee, Siang Hui Lai, Choon Hua Thng, Wai Har Ng, Reuben Ng, Soo Yong Tan, Shu Yen Lee, Mark E. H. Tan, Jaichandran Sivalingam, Pierce K. H. Chow, Oi Lian Kon
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.pone.0153642

Metabolic Biomarker Panels of Response to Fusarium Head Blight Infection in Different Wheat Varieties
Cited by: 29
Author(s): Miroslava Čuperlović-Culf, Lipu Wang, Lily Forseille, Kerry Boyle, Nadine Merkley, Ian W. Burton, Pierre R. Fobert
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0186942

Genetic analysis and gene mapping of a low stigma exposed mutant gene by high-throughput sequencing
Cited by: 10
Author(s): Xiao Ma, Zhong Zheng, Fanshu Lin, Tingting Ge, Huimin Sun
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0014301

Chromatin Remodeling Pathways in Smooth Muscle Cell Differentiation, and Evidence for an Integral Role for p300
Cited by: 26
Author(s): Joshua M. Spin, Thomas Quertermous, Philip S. Tsao
Software Mentions: 1
Published: almost 16 years ago

10.1371/journal.pone.0222328

Understanding the variability of Australian fire weather between 1973 and 2017
Cited by: 78
Author(s): Sarah Harris, Chris Lucas
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0039470

Acidithiobacillus caldus Sulfur Oxidation Model Based on Transcriptome Analysis between the Wild Type and Sulfur Oxygenase Reductase Defective Mutant
Cited by: 96
Author(s): Linxu Chen, Yilin Ren, Jianqun Lin, Xiangmei Liu, Xin Pang
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0132452

Exploring Dance Movement Data Using Sequence Alignment Methods
Cited by: 11
Author(s): Seyed Hossein Chavoshi, Bernard De Baets, Tijs Neutens, Guy De Tré, Nico Van de Weghe
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0068831

Distinct Pools of Non-Glycolytic Substrates Differentiate Brain Regions and Prime Region-Specific Responses of Mitochondria
Cited by: 20
Author(s): Mi Kyung Lee, Zhiyin Xun, Virginia M. Platt, Helen Budworth, Christie A. Canaria, Cynthia T. McMurray
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0200288

The advantages of using drones over space-borne imagery in the mapping of mangrove forests
Cited by: 80
Author(s): Monika Ruwaimana, Behara Satyanarayana, Viviana Otero, Aidy M. Muslim, A Muhammad Syafiq, Salihu Ibrahim, Dries Raymaekers, Nico Koedam, Farid Dahdouh‐Guebas
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0234992

Nonlinear adaptive NeuroFuzzy feedback linearization based MPPT control schemes for photovoltaic system in microgrid
Cited by: 14
Author(s): Muhammad Awais, Laiq Khan, Saghir Ahmad, Sidra Mumtaz, Rabiah Badar
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0007592

Regulation of GABAA and Glutamate Receptor Expression, Synaptic Facilitation and Long-Term Potentiation in the Hippocampus of Prion Mutant Mice
Cited by: 61
Author(s): Alejandra Rangel, Noelia Madroñal, Agnès Gruart i. Massó, Rosalina Gavı́n, Franc Llorens, Lauro Sumoy, Juan María Torres, José M. Delgado‐García, José Antonio del Rı́o
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0068545

Discovery and Characterization of BlsE, a Radical S-Adenosyl-L-methionine Decarboxylase Involved in the Blasticidin S Biosynthetic Pathway
Cited by: 17
Author(s): Jun Feng, Jun Wu, Nan Dai, Shuangjun Lin, H. Howard Xu, Zixin Deng, Xinyi He
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0002397

Virus Adaptation by Manipulation of Host's Gene Expression
Cited by: 83
Author(s): Ana Patrícia, Pablo Carbonell, Miguel A. Pérez‐Amador, Santiago F. Elena
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.pone.0062752

Inhibition of DEPDC1A, a Bad Prognostic Marker in Multiple Myeloma, Delays Growth and Induces Mature Plasma Cell Markers in Malignant Plasma Cells
Cited by: 23
Author(s): Alboukadel Kassambara, Matthieu Schoenhals, Jérôme Moreaux, Jean-Luc Veyrune, Thierry Rème, Hartmut Goldschmidt, Dirk Hose, Bernard Klein
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0126409

DIDA: Distributed Indexing Dispatched Alignment
Cited by: 14
Author(s): Hamid Mohamadi, Benjamin P. Vandervalk, Anthony Raymond, Shaun D. Jackman, Justin Chu, Clay P. Breshears, İnanç Birol
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0051131

Systematic Analysis of the Gene Expression in the Livers of Nonalcoholic Steatohepatitis: Implications on Potential Biomarkers and Molecular Pathological Mechanism
Cited by: 17
Author(s): Yida Zhang, Susan S. Baker, Robert D. Baker, Rong Zhu, Lixin Zhu
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0107204

A Prolyl-Hydroxylase Inhibitor, Ethyl-3,4-Dihydroxybenzoate, Induces Cell Autophagy and Apoptosis in Esophageal Squamous Cell Carcinoma Cells via Up-Regulation of BNIP3 and N-myc Downstream-Regulated Gene-1
Cited by: 28
Author(s): Bo Han, Wei Li, Yulin Sun, Lanping Zhou, Yang Xu, Xiaohang Zhao
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0192039

The use of geographic information system and 1860s cadastral data to model agricultural suitability before heavy mechanization. A case study from Malta
Cited by: 9
Author(s): Gianmarco Alberti, Reuben Grima, Nicholas C. Vella
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0073074

Network and Data Integration for Biomarker Signature Discovery via Network Smoothed T-Statistics
Cited by: 59
Author(s): Yupeng Cun, Holger Fröhlich
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0038465

γ-H2AX Kinetics as a Novel Approach to High Content Screening for Small Molecule Radiosensitizers
Cited by: 20
Author(s): Shihua Fu, Ying Yang, Das Tirtha, Yun Yen, Bing Zhou, Ming Zhou, Michael Ohlmeyer, Eric C. Ko, Ross L. Cagan, Barry S. Rosenstein, Shu hsia Chen, Johnny Kao
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0011742

Comparative Membranome Expression Analysis in Primary Tumors and Derived Cell Lines
Cited by: 18
Author(s): Paolo Uva, Armin Lahm, Andrea Sbardellati, Anita Grigoriadis, Andrew Tutt, Emanuele de Rinaldis
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0153903

The Influence of the Global Gene Expression Shift on Downstream Analyses
Cited by: 2
Author(s): Qifeng Xu, Xuegong Zhang
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0124519

Traces of Unconscious Mental Processes in Introspective Reports and Physiological Responses
Cited by: 14
Author(s): Leonid Ivonin, He Chang, Marta Díaz, Andreu Catalá, Wei Chen, Matthias Rauterberg
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0198714

Highly multiplexed genome engineering using CRISPR/Cas9 gRNA arrays
Cited by: 43
Author(s): Morito Kurata, Natalie K. Wolf, Walker S. Lahr, Madison T. Weg, Mitchell G. Kluesner, Samantha Lee, Kai Hui, Masano Shiraiwa, Beau R. Webber, Branden S. Moriarity
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0022317

Cysteine-Rich Secretory Protein-3 (CRISP3) Is Strongly Up-Regulated in Prostate Carcinomas with the TMPRSS2-ERG Fusion Gene
Cited by: 38
Author(s): Franclim R. Ribeiro, Paula Paulo, Vera L. Costa, João D. Barros-Silva, João Ramalho-Carvalho, Carmen Jerónimo, Rui Henrique, Guro Elisabeth Lind, Rolf Inge Skotheim, Ragnhild Lothe, Manuel R. Teixeira
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0044172

Sperm Cells Induce Distinct Cytokine Response in Peripheral Mononuclear Cells from Infertile Women with Serum Anti-Sperm Antibodies
Cited by: 6
Author(s): Miloslav Kverka, Z Ulčová-Gallová, Jiřina Bártová, J Cibulka, K Bibková, Z Mičanová, Helena Tlaskalová‐Hogenová
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0030044

Host Genes Related to Paneth Cells and Xenobiotic Metabolism Are Associated with Shifts in Human Ileum-Associated Microbial Composition
Cited by: 28
Author(s): Tianyi Zhang, Robert A. DeSimone, Xiangmin Jiao, F. James Rohlf, Wei Zhu, Qing Gong, Steven R. Hunt, Themistocles Dassopoulos, Rodney D. Newberry, Erica Sodergren, George M. Weinstock, Charles E. Robertson, Daniel N. Frank, Ellen Li
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0131927

Olfactomedin 4 Serves as a Marker for Disease Severity in Pediatric Respiratory Syncytial Virus (RSV) Infection
Cited by: 49
Author(s): H. Kim Brand, Inge M. L. Ahout, Dick de Ridder, Angela van Diepen, Y. Li, M. Zaalberg, Arno C. Andeweg, Nel Roeleveld, Ronald de Groot, Adilia Warris, Peter W. M. Hermans, Gerben Ferwerda, Frank J. T. Staal
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0211760

Linking species functional traits of terrestrial vertebrates and environmental filters: A case study in temperate mountain systems
Cited by: 10
Author(s): Paula García-Llamas, Thiago F. Rangel, Leonor Calvo
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0134757

Downstream Warming and Headwater Acidity May Diminish Coldwater Habitat in Southern Appalachian Mountain Streams
Cited by: 35
Author(s): Todd C. McDonnell, Matthew R. Sloat, Timothy J. Sullivan, C. Andrew Dolloff, Paul F. Hessburg, Nicholas A. Povak, W. A. Jackson, Christopher Sams
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0009396

High Resolution Niche Models of Malaria Vectors in Northern Tanzania: A New Capacity to Predict Malaria Risk?
Cited by: 71
Author(s): Manisha A. Kulkarni, Rachelle E. Desrochers, Jeremy T. Kerr
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0174297

miRNAs in the vitreous humor of patients affected by idiopathic epiretinal membrane and macular hole
Cited by: 24
Author(s): Andrea Russo, Marco Ragusa, Cristina Barbagallo, Antonio Longo, Teresio Avitabile, Maurizio G. Uva, Vincenza Bonfiglio, Mario Damiano Toro, Rosario Caltabiano, Cesare Mariotti, Francesco Boscia, Mario R. Romano, Cinzia Santa Di Pietro, Davide Barbagallo, Michele Purrello, Michele Reibaldi
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0155993

Discovery and Validation of Prognostic Biomarker Models to Guide Triage among Adult Dengue Patients at Early Infection
Cited by: 12
Author(s): Junxiong Pang, Anna Lindblom, Thomas Tolfvenstam, Tun-Linn Thein, Ahmad Nazri Mohamed Naim, Ling Ling, Angelia Chow, Mark Chen, Eng Eong Ooi, Yee Sin Leo, Martin L. Hibberd
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0016143

The Functional Consequences of Mutualistic Network Architecture
Cited by: 64
Author(s): José M. Gómez, Francisco Perfectti, Pedro Jordano
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0007458

Genome-Wide Transcriptome Analyses of Silicon Metabolism in Phaeodactylum tricornutum Reveal the Multilevel Regulation of Silicic Acid Transporters
Cited by: 97
Author(s): Guillaume Sapriel, Michelle Quinet, Marc Heijde, Laurent Jourdren, Véronique Tanty, Guangzuo Luo, Stéphane Le Crom, Pascal J. Lopez
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0067728

Effect of Licochalcone A on Growth and Properties of Streptococcus suis
Cited by: 17
Author(s): Huaijie Hao, Wenjia Hui, Peng Liu, Qingyu Lv, Xiao-Tao Zeng, Hua Jiang, Yanzi Wang, Xin Zheng, Yinan Zheng, Jianchun Li, X. Y. Zhou, Yongqiang Jiang
Software Mentions: 1
Published: about 13 years ago

10.1289/ehp.0901047

Maternal Dioxin Exposure Combined with a Diet High in Fat Increases Mammary Cancer Incidence in Mice
Cited by: 38
Author(s): Michele A. La Merrill, Rachel Harper, Linda S. Birnbaum, Robert D. Cardiff, David W. Threadgill
Software Mentions: 1
Published: over 16 years ago

10.1289/ehp.8337

The Relationship between Ambient Air Pollution and Heart Rate Variability Differs for Individuals with Heart and Pulmonary Disease
Cited by: 113
Author(s): Amanda Wheeler, Antonella Zanobetti, Diane R. Gold, Joel Schwartz, Peter H. Stone, Helen Suh
Software Mentions: 1
Published: over 20 years ago

10.1289/ehp.1104282

Inflammatory Pathway Genes Belong to Major Targets of Persistent Organic Pollutants in Adipose Cells
Cited by: 143
Author(s): Min Ji Kim, Véronique Pelloux, Erwan Guyot, Joan Tordjman, Linh‐Chi Bui, Aline Chevallier, Claude Forest, C Benelli, Karine Clément, Robert Barouki
Software Mentions: 1
Published: over 14 years ago

10.1289/txg.7204

Prediction of Toxicant-Specific Gene Expression Signatures after Chemotherapeutic Treatment of Breast Cell Lines
Cited by: 11
Author(s): Melissa A. Troester, Katherine A. Hoadley, Joel S. Parker, Charles M. Perou
Software Mentions: 1
Published: almost 22 years ago

10.4178/epih.e2020003

Recovery time from severe acute malnutrition and associated factors among under-5 children in Yekatit 12 Hospital, Addis Ababa, Ethiopia: a retrospective cohort study
Cited by: 9
Author(s): Mekonen Adimasu, Girum Sebsibie, Fikrtemariam Abebe, Getaneh Baye, Kerebih Abere
Software Mentions: 1
Published: over 6 years ago

10.1186/s13072-016-0084-2

The cancer-associated CTCFL/BORIS protein targets multiple classes of genomic repeats, with a distinct binding and functional preference for humanoid-specific SVA transposable elements
Cited by: 29
Author(s): Elena M. Pugacheva, Evgeny Teplyakov, Qiongfang Wu, Jingjing Li, Chen Cheng, Chengcheng Meng, Jian Liu, Susan Robinson, Dmitry Loukinov, Abdelhalim Boukaba, Andrew P. Hutchins, Victor Lobanenkov, Alexander Strunnikov
Software Mentions: 1
Published: about 10 years ago

10.1186/1756-8935-6-18

Constitutional trisomy 8 mosaicism as a model for epigenetic studies of aneuploidy
Cited by: 20
Author(s): Josef Davidsson, Srinivas Veerla, Bertil Johansson
Software Mentions: 1
Published: about 13 years ago

10.1186/1756-8935-4-7

Extensive epigenetic reprogramming in human somatic tissues between fetus and adult
Cited by: 58
Author(s): Ryan K. C. Yuen, Sarah Neumann, Alexandra Fok, Maria S. Peñaherrera, Deborah E. McFadden, Wendy P. Robinson, Michæl S. Kobor
Software Mentions: 1
Published: over 15 years ago

10.1111/j.1365-2362.2010.02437.x

The effect of next-generation sequencing technology on complex trait research
Cited by: 52
Author(s): Aaron G. Day‐Williams, Eleftheria Zeggini
Software Mentions: 1
Published: over 15 years ago

10.1111/ejn.12520

Localizing evoked and induced responses to faces using magnetoencephalography
Cited by: 19
Author(s): Gavin Perry, Krish Devi Singh
Software Mentions: 1
Published: over 12 years ago

10.1111/j.1460-9568.2011.07777.x

Retinotopic mapping of the primary visual cortex - a challenge for MEG imaging of the human cortex
Cited by: 15
Author(s): Gavin Perry, Peyman Adjamian, Ngoc Jade Thai, Ian Holliday, Arjan Hillebrand, Gareth R. Barnes
Software Mentions: 1
Published: about 15 years ago

10.1007/s00394-020-02200-9

Synbiotic supplementation with prebiotic green banana resistant starch and probiotic Bacillus coagulans spores ameliorates gut inflammation in mouse model of inflammatory bowel diseases
Cited by: 50
Author(s): Rajaraman Eri, Agampodi Promoda Perera, Ravichandra Vemuri, Shakuntla Gondalia, David J. Beale, Avinash V. Karpe, Sonia Shastri, Waheedha Basheer, Benjamin Southam, Roger Stanley
Software Mentions: 1
Published: over 6 years ago

10.1111/eos.12079

Can you read my pokerface? A study on sex differences in dentophobia
Cited by: 5
Author(s): Verena Leutgeb, Sonja Übel, Anne Schienle
Software Mentions: 1
Published: about 13 years ago

10.5964/ejop.v14i3.1593

Effect of congruence between sound and video on heart rate and self-reported measures of emotion
Cited by: 1
Author(s): Sebastián Calderón, Raúl Rincón Flórez, Andrés Araujo, Carlos Gantiva
Software Mentions: 1
Published: about 8 years ago

10.3402/ejpt.v6.27882

Mobile mental health: a challenging research agenda
Cited by: 177
Author(s): Miranda Olff
Software Mentions: 1
Published: over 11 years ago

10.3402/ejpt.v6.28545

Early interventions: from e-health to neurobiology
Cited by: 10
Author(s): Miranda Olff, Mirjam van Zuiden, Anne Bakker
Software Mentions: 1
Published: over 11 years ago

10.1183/13993003.01301-2016

Long-term effects of severe acute malnutrition on lung function in Malawian children: a cohort study
Cited by: 23
Author(s): Natasha Lelijveld, Marko Kerac, Andrew Seal, Emmanuel Chimwezi, Jonathan C. K. Wells, Robert S. Heyderman, Moffat Nyirenda, Janet Stocks, Jane Kirkby
Software Mentions: 1
Published: over 9 years ago

10.1111/eva.12581

Call of the wild rice: <i>Oryza rufipogon</i> shapes weedy rice evolution in Southeast Asia
Cited by: 42
Author(s): Cynthia C. Vigueira, Xuchen Qi, Beng Kah Song, Lin Feng Li, Ana L. Caicedo, Yulin Jia, Kenneth M. Olsen
Software Mentions: 1
Published: over 8 years ago

10.1186/s40164-016-0032-7

Identification of AIM2 as a downstream target of JAK2V617F
Cited by: 15
Author(s): Ei Leen Liew, Marito Araki, Yumi Hironaka, Seiichi Mori, Tuan Zea Tan, Soji Morishita, Yoko Edahiro, Akimichi Ohsaka, Norio Komatsu
Software Mentions: 1
Published: almost 11 years ago

10.12688/f1000research.9762.1

Viewing RNA-seq data on the entire human genome
Cited by: 2
Author(s): Eric Weitz, Lorena Pantano, Jingzhi Zhu, Bennett Upton, Ben Busby
Software Mentions: 1
Published: over 9 years ago

10.12688/f1000research.25088.2

Affective rating of audio and video clips using the EmojiGrid
Cited by: 2
Author(s): Alexander Toet, J.B.F. van Erp
Software Mentions: 1
Published: over 5 years ago

10.12688/f1000research.1-2.v2

Considerations for clinical read alignment and mutational profiling using next-generation sequencing
Cited by: 6
Author(s): Gavin R. Oliver
Software Mentions: 1
Published: almost 14 years ago

10.12688/f1000research.6255.1

Short-term effect of acute and repeated urinary bladder inflammation on thigmotactic behaviour in the laboratory rat
Cited by: 14
Author(s): Rosie Morland, Amparo Novejarque, Wenlong Huang, Rachel Wodarski, Franziska Denk, J. D. K. Dawes, T. Pheby, Stephen B. McMahon, Andrew S.C. Rice
Software Mentions: 1
Published: over 11 years ago

10.12688/f1000research.4734.3

Anterior and posterior subareas of the dorsolateral frontal cortex in socially relevant decisions based on masked affect expressions
Cited by: 2
Author(s): Denise Prochnow, Sascha Brunheim, Hannes Kossack, Simon B. Eickhoff, Hans J. Markowitsch, Rüdiger J. Seitz
Software Mentions: 1
Published: about 11 years ago

10.1007/s10689-014-9728-1

Distinct gene expression profiles in ovarian cancer linked to Lynch syndrome
Cited by: 17
Author(s): Jenny-Maria Jönsson, Katarina Bartuma, Mev Dominguez‐Valentin, Katja Harbst, Zohreh Ketabi, Susanne Malander, Mats Jönsson, Ana Carneiro, Anna Måsbäck, Göran Jönsson, Mef Nilbert
Software Mentions: 1
Published: over 12 years ago

10.1016/j.fochx.2019.100035

Toward on-site food authentication using nanopore sequencing
Cited by: 16
Author(s): Marleen M. Voorhuijzen-Harink, Rico Hagelaar, Jeroen P. van Dijk, T.W. Prins, E.J. Kok, Martijn Staats
Software Mentions: 1
Published: over 7 years ago

10.3390/foods4020130

A Prospective Randomized Double-Blind Study Evaluating UP165 and S-Adenosyl-l-Methionine on Depression, Anxiety and Psychological Well-Being
Cited by: 2
Author(s): Douglas Kalman, Steven R. Feldman, Rafeal Rivas Vazquez, Diane Krieger
Software Mentions: 1
Published: over 11 years ago

10.3389/fnagi.2017.00395

Salicylate-Induced Suppression of Electrically Driven Activity in Brain Slices from the Auditory Cortex of Aging Mice
Cited by: 6
Author(s): Minoru Namikawa, Sano Ayaka, Toshitake Tateno
Software Mentions: 1
Published: almost 9 years ago

10.3389/fnagi.2013.00065

Nodes and biological processes identified on the basis of network analysis in the brain of the senescence accelerated mice as an Alzheimer's disease animal model
Cited by: 40
Author(s): Xiaorui Cheng, Xiuliang Cui, Yue Zheng, Guirong Zhang, Peng Li, Huang Huang, Yue-Ying Zhao, Xiaochen Bo, Shengqi Wang, Wen Zhou, Yongxiang Zhang
Software Mentions: 1
Published: over 13 years ago

10.3389/fnagi.2016.00040

Identifying Dysfunctional Cortex: Dissociable Effects of Stroke and Aging on Resting State Dynamics in MEG and fMRI
Cited by: 51
Author(s): Aneta Kielar, Tiffany Deschamps, Ron Chu, Regina Jokel, Yasha B. Khatamian, Jean Chen, Jed A. Meltzer
Software Mentions: 1
Published: over 10 years ago

10.3389/fnagi.2021.687456

ADVIAN: Alzheimer's Disease VGG-Inspired Attention Network Based on Convolutional Block Attention Module and Multiple Way Data Augmentation
Cited by: 37
Author(s): Shuihua Wang, Qinghua Zhou, Ming Yang, Yudong Zhang
Software Mentions: 1
Published: about 5 years ago

10.3389/fnbeh.2018.00270

Common Recruitment of Angular Gyrus in Episodic Autobiographical Memory and Bodily Self-Consciousness
Cited by: 28
Author(s): Lucie Bréchet, Petr Grivaz, Baptiste Gauthier, Olaf Blanke
Software Mentions: 1
Published: almost 8 years ago

10.3389/fnbeh.2014.00121

Neuropeptide S and BDNF gene expression in the amygdala are influenced by social decision-making under stress
Cited by: 32
Author(s): Justin Smith, Justin K. Achua, Tangi R. Summers, Patrick J. Ronan, Cliff H. Summers
Software Mentions: 1
Published: over 12 years ago

10.3389/fnbeh.2014.00449

Episodic memory and self-reference via semantic autobiographical memory: insights from an fMRI study in younger and older adults
Cited by: 27
Author(s): Sandrine Kalenzaga, Marco Sperduti, AdÃ ̈le Anssens, Pénélope Martinelli, Anne-Dominique Devauchelle, Thierry Gallarda, Marion Delhommeau, StÃ©phanie Lion, Isabelle Amado, Marie‐Odile Krebs, Catherine Oppenheim, Pascale Piolino
Software Mentions: 1
Published: over 11 years ago

10.3389/fnbeh.2020.00089

Automatic Reappraisal-Based Implementation Intention Produces Early and Sustainable Emotion Regulation Effects: Event-Related Potential Evidence
Cited by: 12
Author(s): Shengdong Chen, Kang Yang Trevor Yu, Jiemin Yang, Jiajin Yuan
Software Mentions: 1
Published: about 6 years ago

10.3389/fnbeh.2018.00225

Frontal EEG Asymmetry and Middle Line Power Difference in Discrete Emotions
Cited by: 73
Author(s): Guoguang Zhao, Yulin Zhang, Yan Ge
Software Mentions: 1
Published: almost 8 years ago

10.3389/fnbeh.2014.00370

Winning the game: brain processes in expert, young elite and amateur table tennis players
Cited by: 28
Author(s): Sebastian Wolf, Ellen Brölz, David Scholz, Ander Ramos-Murguialday, Philipp M. Keune, Martin Hautzinger, Niels Birbaumer, Ute Strehl
Software Mentions: 1
Published: almost 12 years ago

10.3389/fbioe.2020.00268

Identification of Pan-Cancer Prognostic Biomarkers Through Integration of Multi-Omics Data
Cited by: 20
Author(s): Ning Zhao, Maozu Guo, Kuanquan Wang, Chunlong Zhang, Xiaoyan Liu
Software Mentions: 1
Published: over 6 years ago

10.3389/fbioe.2019.00031

An EU Perspective on Biosafety Considerations for Plants Developed by Genome Editing and Other New Genetic Modification Techniques (nGMs)
Cited by: 55
Author(s): Michael Eckerstorfer, Marion Dolezel, Andreas Heissenberger, Marianne Miklau, Wolfram Reichenbecher, Ricarda A. Steinbrecher, Friedrich Waßmann
Software Mentions: 1
Published: over 7 years ago

10.3389/fbioe.2020.00553

Identification of a Multi–Long Noncoding RNA Signature for the Diagnosis of Type 1 Diabetes Mellitus
Cited by: 11
Author(s): Guannan Geng, Zicheng Zhang, Cheng Liang
Software Mentions: 1
Published: about 6 years ago

10.3389/fbioe.2018.00146

Hydrogen Peroxide-Based Fluorometric Assay for Real-Time Monitoring of SAM-Dependent Methyltransferases
Cited by: 8
Author(s): M. Kalim Akhtar, Dhanya Vijay, Saima Umbreen, Chris McLean, Yizhi Cai, Dominic J. Campopiano, Gary J. Loake
Software Mentions: 1
Published: almost 8 years ago

10.3389/fcell.2021.690373

Oleic Acid Protects Caenorhabditis Mothers From Mating-Induced Death and the Cost of Reproduction
Cited by: 9
Author(s): Leo Sungwong Choi, Cheng Shi, Jasmine Ashraf, Salman Sohrabi, Coleen T. Murphy
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2019.00269

Multidisciplinary and Comparative Investigations of Potential Psychobiotic Effects of Lactobacillus Strains Isolated From Newborns and Their Impact on Gut Microbiota and Ileal Transcriptome in a Healthy Murine Model
Cited by: 17
Author(s): Bo Ram Beck, Gun-Seok Park, Do Yeun Jeong, Yong Hyun Lee, Sunghoon Im, Won Ho Song, Jihee Kang
Software Mentions: 1
Published: about 7 years ago

10.3389/fchem.2018.00068

How Diverse Are the Protein-Bound Conformations of Small-Molecule Drugs and Cofactors?
Cited by: 7
Author(s): Nils-Ole Friedrich, Méliné Simsir, Johannes Kirchmair
Software Mentions: 1
Published: over 8 years ago

10.3389/fncom.2013.00093

Graph theoretical analysis of resting magnetoencephalographic functional connectivity networks
Cited by: 30
Author(s): Lindsay Rutter, Sreenivasan Rajamoni Nadar, Tom Holroyd, Frederick W. Carver, José Apud, Daniel R. Weinberger, Richard Coppola
Software Mentions: 1
Published: over 13 years ago

10.3389/fncom.2015.00149

Neural Network Model of Memory Retrieval
Cited by: 29
Author(s): Stefano Recanatesi, Mikhail Katkov, Sandro Romani, Misha Tsodyks
Software Mentions: 1
Published: over 10 years ago

10.3389/fncom.2017.00119

Dynamic Hebbian Cross-Correlation Learning Resolves the Spike Timing Dependent Plasticity Conundrum
Cited by: 4
Author(s): Tjeerd Olde Scheper, Rhiannon M. Meredith, Huibert D. Mansvelder, Jaap van Pelt, Arjen van Ooyen
Software Mentions: 1
Published: over 8 years ago

10.3389/fendo.2014.00133

Gene Expression Profiling in Mouse Embryonic Stem Cells Reveals Glycogen Synthase Kinase-3-Dependent Targets of Phosphatidylinositol 3-Kinase and Wnt/Î²-Catenin Signaling Pathways
Cited by: 8
Author(s): Colleen M. Bartman, Jennifer N. Egelston, Sravya Kattula, Leigh C. Zeidner, Anthony D’Ippolito, Bradley W. Doble, Christopher J. Phiel
Software Mentions: 1
Published: about 12 years ago

10.3389/fendo.2020.574662

Genetic and Clinical Profiles of Pheochromocytoma and Paraganglioma: A Single Center Study
Cited by: 11
Author(s): Xiaosen Ma, Ming Li, Anli Tong, Fen Wang, Yunying Cui, Xuebin Zhang, Yushi Zhang, Shi Chen, Yuxiu Li
Software Mentions: 1
Published: almost 6 years ago

10.3389/fendo.2021.605797

Identification of Clinical Relevant Molecular Subtypes of Pheochromocytoma
Cited by: 2
Author(s): Umair Ali Khan Saddozai, Fengling Wang, Muhammad Usman Akbar, Lu Zhang, Yang An, Wan Zhu, Longxiang Xie, Yongqiang Li, Xin‐Ying Ji, Xiangqian Guo
Software Mentions: 1
Published: about 5 years ago

10.3389/fendo.2018.00678

Integration of Proteomics and Metabolomics Revealed Metabolite–Protein Networks in ACTH-Secreting Pituitary Adenoma
Cited by: 22
Author(s): Jiaxuan Feng, Qi Zhang, Yang Zhou, Shenyuan Yu, Liu Hong, Sida Zhao, Jingjing Yang, Hong Wan, Guowang Xu, Yazhou Zhang, Chuzhong Li
Software Mentions: 1
Published: almost 8 years ago

Projects: cran: SAM

Science Score: 85/100

Bonuses:

Penalties:

Papers Mentioning SAM 4,566