10.3390/ijms140611560

MicroRNA-Regulated Protein-Protein Interaction Networks and Their Functions in Breast Cancer
Cited by: 55
Author(s): Chia Hsien Lee, Wen-Hsing Kuo, Lin Chen, Yen Jen Oyang, Hsuan‐Cheng Huang, Hsueh‐Fen Juan
Software Mentions: 1
Published: about 13 years ago

10.3390/ijms141020326

MicroRNA Expression Profiling of the Porcine Developing Hypothalamus and Pituitary Tissue
Cited by: 18
Author(s): Lifan Zhang, Zhaowei Cai, Song Wei, Huiyun Zhou, Hongmei Zhou, Xiaoling Jiang, N. Xu
Software Mentions: 1
Published: over 12 years ago

10.3389/fpls.2017.00929

Whole Plant Temperature Manipulation Affects Flavonoid Metabolism and the Transcriptome of Grapevine Berries
Cited by: 95
Author(s): Chiara Pastore, Silvia Dal Santo, Sara Zenoni, Nushin Movahed, Gianluca Allegro, Gabriele Valentini, Ilaria Filippetti, Giovanni Battista Tornielli
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-2202-11-53

Downstream targets of methyl CpG binding protein 2 and their abnormal expression in the frontal cortex of the human Rett syndrome brain
Cited by: 79
Author(s): John G. Gibson, Barry Slobedman, K N Harikrishnan, Sarah Williamson, Dmytro O. Minchenko, Assam El‐Osta, Josh Lewis Stern, John Christodoulou
Software Mentions: 1
Published: about 16 years ago

10.1186/s40795-017-0161-3

Treatment outcome and associated factors of severe acute malnutrition among 6–59 months old children in Debre Markos and Finote Selam hospitals, Northwest Ethiopia: a retrospective cohort study
Cited by: 25
Author(s): Getnet Mekuria, Tariku Derese, Getachew Hailu
Software Mentions: 1
Published: about 9 years ago

10.1186/s40795-021-00406-6

“No weight for height” case detection strategies for therapeutic feeding programs: sensitivity to acute malnutrition and target composition based on representative surveys in humanitarian settings
Cited by: 2
Author(s): Benjamin Guesdon, Alexia Couture, Elise Lesieur, Oleg Bilukha
Software Mentions: 1
Published: over 5 years ago

10.1186/s12886-020-01664-x

Assessment of online patient education materials designed for people with age-related macular degeneration
Cited by: 7
Author(s): Jennifer K Fortuna, Anne Riddering, Linda Shuster, Cassie Lopez-Jeng
Software Mentions: 1
Published: over 5 years ago

10.1186/s12886-017-0537-9

MiRNAs regulate oxidative stress related genes via binding to the 3′ UTR and TATA-box regions: a new hypothesis for cataract pathogenesis
Cited by: 36
Author(s): Chunrong Wu, Zhao Liu, Le Ma, Cheng Pei, Qin Li, Ning Gao, Jun Li, Yue Yin
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12886-021-01994-4

Lateral rectus muscle differentiation potential in paralytic esotropia patients
Cited by: 2
Author(s): Qing Xia, Xiangtian Ling, Zhonghao Wang, Tao Shen, Minghao Chen, Danyi Mao, Xinqi Ma, Jie Ning, Han Zhang, Dongli Chen, Qiong Gu, Huangxuan Shen, Jianhua Yan
Software Mentions: 1
Published: about 5 years ago

10.1186/s12886-016-0315-0

Readability of patient education materials in ophthalmology: a single-institution study and systematic review
Cited by: 84
Author(s): Andrew M. Williams, Kelly W. Muir, Jullia A Rosdahl
Software Mentions: 1
Published: almost 10 years ago

10.1186/1471-2415-7-15

Idiopathic intracranial hypertension: the association between weight loss and the requirement for systemic treatment
Cited by: 67
Author(s): Roger Wong, S A Madill, Pravin Pandey, Paul Riordan-Eva
Software Mentions: 1
Published: over 18 years ago

10.1186/s12903-019-0718-4

Emotional stimuli candidates for behavioural intervention in the prevention of early childhood caries: a pilot study
Cited by: 4
Author(s): Michaela Bartošová, Miroslav Světlák, Martina Kukletová, Petra Bořilová Linhartová, Ladislav Dušek, Lýdie Izakovičová Hollá
Software Mentions: 1
Published: over 7 years ago

10.1186/s12887-017-0950-5

Developmental performance of hospitalized severely acutely malnourished under-six children in low- income setting
Cited by: 9
Author(s): Teklu Gemechu Abessa, Liesbeth Bruckers, Patrick Kolsteren, Marita Granitzer
Software Mentions: 1
Published: over 8 years ago

10.1186/1472-6793-8-23

Molecular analysis of photic inhibition of blood-feeding in Anopheles gambiae
Cited by: 55
Author(s): Suchismita Das, George Dimopoulos
Software Mentions: 1
Published: over 18 years ago

10.1186/1472-6793-5-8

Cited by: 40
Author(s): Nina Ståhlberg, Roxana Merino, Luis Henríquez Hernández, Leandro Fernández-Pérez, Albin Sandelin, Pär G. Engström, Petra Tollet-Egnell, Boris Lenhard, Amilcar Flores‐Morales
Software Mentions: 1
Published: over 21 years ago

10.1186/s12870-021-02824-x

Transcriptomic profiling of wheat near-isogenic lines reveals candidate genes on chromosome 3A for pre-harvest sprouting resistance
Cited by: 5
Author(s): Xingyi Wang, Hui Liu, Kadambot H. M. Siddique, Guijun Yan
Software Mentions: 1
Published: over 5 years ago

10.1186/s12870-018-1528-6

Identification and characterization of drought-responsive CC-type glutaredoxins from cassava cultivars reveals their involvement in ABA signalling
Cited by: 29
Author(s): Meiying Ruan, Yiling Yang, Kaimian Li, Xin Guo, Bin Wang, Xiaoling Yu, Ming Peng
Software Mentions: 1
Published: over 7 years ago

10.1186/s12870-019-1991-8

A fern WUSCHEL-RELATED HOMEOBOX gene functions in both gametophyte and sporophyte generations
Cited by: 19
Author(s): Christopher E. Youngstrom, Lander F. Geadelmann, Erin E. Irish, Chi‐Lien Cheng
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2229-8-110

Genome-wide transcriptional analysis of super-embryogenic Medicago truncatula explant cultures
Cited by: 43
Author(s): Nijat Imin, Nicolas Goffard, Mahira Nizamidin, Barry G. Rolfe
Software Mentions: 1
Published: over 18 years ago

10.1186/s12870-019-2198-8

Genome-scale mining of root-preferential genes from maize and characterization of their promoter activity
Cited by: 7
Author(s): Ye Li, Xiaoqing Liu, Rumei Chen, Jian Tian, Yanting Fan, Xiaojin Zhou
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2229-6-25

Cited by: 309
Author(s): Yuan‐Qing Jiang, Michael K. Deyholos
Software Mentions: 1
Published: over 20 years ago

10.1186/s12870-020-02380-w

Wide crossing diversify mitogenomes of rice
Cited by: 4
Author(s): Wenchao Yang, Jianing Zou, Jiajia Wang, Nengwu Li, Xiaoyun Luo, Xiaofen Jiang, Shaoqing Li
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2229-13-30

Selective defoliation affects plant growth, fruit transcriptional ripening program and flavonoid metabolism in grapevine
Cited by: 115
Author(s): Chiara Pastore, Sara Zenoni, Marianna Fasoli, Mario Pezzotti, Giovanni Battista Tornielli, Ilaria Filippetti
Software Mentions: 1
Published: over 13 years ago

10.1186/s12870-016-0730-7

On the role of ethylene, auxin and a GOLVEN-like peptide hormone in the regulation of peach ripening
Cited by: 40
Author(s): Alice Tadiello, Vanina Ziosi, Attilio Negri, M. Noferini, Giovanni Fiori, Nicola Busatto, Luca Espen, Guglielmo Costa, Livio Trainotti
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2229-11-18

Identification of rhizome-specific genes by genome-wide differential expression Analysis in Oryza longistaminata
Cited by: 67
Author(s): Fengyi Hu, Di Wang, Xiuqin Zhao, Ting Zhang, Hai‐Xi Sun, Linghua Zhu, Fan Zhang, Lijuan Li, Qiong Li, Dayun Tao, Binying Fu, Zhikang Li
Software Mentions: 1
Published: over 15 years ago

10.1186/s12870-016-0945-7

Transcriptomic and proteomic approach to identify differentially expressed genes and proteins in Arabidopsis thaliana mutants lacking chloroplastic 1 and cytosolic FBPases reveals several levels of metabolic regulation
Cited by: 10
Author(s): Mauricio Soto‐Suárez, Antonio Jesús Serrato, José A. Rojas-González, Rocí­o Bautista, Mariam Sahrawy
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2229-8-73

Transcriptional profiling of the pea shoot apical meristem reveals processes underlying its function and maintenance
Cited by: 24
Author(s): Chui Eng Wong, Prem L. Bhalla, H.H. Ottenhof, Mohan B. Singh
Software Mentions: 1
Published: almost 18 years ago

10.1186/s12870-014-0225-3

Deep resequencing reveals allelic variation in Sesamum indicum
Cited by: 27
Author(s): Linhai Wang, Xuelian Han, Yanxin Zhang, Donghua Li, Xin Wei, Xuezhi Ding, Xiurong Zhang
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2229-12-234

Transcriptome response analysis of Arabidopsis thaliana to leafminer (Liriomyza huidobrensis)
Cited by: 6
Author(s): Sufang Zhang, Zhen Zhang, Le Kang
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2229-10-272

Habituation to thaxtomin A in hybrid poplar cell suspensions provides enhanced and durable resistance to inhibitors of cellulose synthesis
Cited by: 16
Author(s): Viviane Brochu, Marie Girard-Martel, Isabelle Duval, Sylvain Lerat, Gilles Grondin, Olivier Domingue, Carole Beaulieu, Nathalie Beaudoin
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2229-12-60

RNAi-mediated silencing of the HD-Zip gene HD20 in Nicotiana attenuata affects benzyl acetone emission from corollas via ABA levels and the expression of metabolic genes
Cited by: 17
Author(s): Delfina Adela Ré, Brenda Raud, Raquel L. Chan, Ian Thomas Baldwin, Gustavo Bonaventure
Software Mentions: 1
Published: about 14 years ago

10.1186/s12870-015-0693-0

The loss-of-function GLABROUS 3 mutation in cucumber is due to LTR-retrotransposon insertion in a class IV HD-ZIP transcription factor gene CsGL3 that is epistatic over CsGL1
Cited by: 74
Author(s): Yupeng Pan, Kailiang Bo, Zhihui Cheng, Yiqun Weng
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2229-10-122

Identification of novel genes potentially involved in somatic embryogenesis in chicory (Cichorium intybus L.)
Cited by: 20
Author(s): Anca Lucau-Danila, Laurent Laborde, Sylvain Legrand, Ludovic Huot, David Hot, Yves Lemoine, Jean‐Louis Hilbert, Simon Hawkins, Marie-Christine Quillet, Théo Hendriks, Anne-Sophie Blervacq
Software Mentions: 1
Published: over 16 years ago

10.1186/s12870-019-1738-6

Extensive nuclear reprogramming and endoreduplication in mature leaf during floral induction
Cited by: 8
Author(s): Stefania Del Prete, Anne Molitor, Delphine Charif, Nadia Bessoltane, Ludivine Soubigou‐Taconnat, Cécile Guichard, Véronique Brunaud, Fabienne Granier, Paul Fransz, Valérie Gaudin
Software Mentions: 1
Published: about 7 years ago

10.1186/s12870-018-1615-8

Mapping of a novel clubroot resistance QTL using ddRAD-seq in Chinese cabbage (Brassica rapa L.)
Cited by: 48
Author(s): Rawnak Laila, Jong-In Park, Arif Hasan Khan Robin, Sathishkumar Natarajan, Harshavardhanan Vijayakumar, Kenta Shirasawa, Sachiko Isobe, Hoy‐Taek Kim, Ill–Sup Nou
Software Mentions: 1
Published: over 7 years ago

10.1186/s12870-018-1308-3

Mapping QTLs for water-use efficiency reveals the potential candidate genes involved in regulating the trait in apple under drought stress
Cited by: 39
Author(s): Haibo Wang, Shuang Zhao, Ke Mao, Qinglong Dong, Bowen Liang, Chao Li, Zhiwei Wei, Mingjun Li, Fengwang Ma
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2229-11-107

A microarray approach to identify genes involved in seed-pericarp cross-talk and development in peach
Cited by: 55
Author(s): Claudio Bonghi, Livio Trainotti, Alessandro Botton, Alice Tadiello, Angela Rasori, F. Ziliotto, Valerio Zaffalon, Giorgio Casadoro, Angelo Ramina
Software Mentions: 1
Published: almost 15 years ago

10.1186/s12884-021-03933-z

The influence of maternal singing on well-being, postpartum depression and bonding – a randomised, controlled trial
Cited by: 5
Author(s): Verena Wulff, Philip Hepp, Oliver T. Wolf, Tanja Fehm, Nora K. Schaal
Software Mentions: 1
Published: almost 5 years ago

10.1186/1753-6561-7-S2-P54

Gene expression profile of stromal cells from potential metastatic sites in breast cancer patients
Cited by: 0
Author(s): Paulo Roberto Del Valle, Maria Lh Katayama, Dirce Maria Carraro, Renato Puga, Eduardo Carneiro de Lyra, Cíntia Mussi Milani, Patrícia Bortman Rozenchan, Maria Mitzi Brentani, Maria Aak Folgueira
Software Mentions: 1
Published: about 13 years ago

10.1186/1471-244X-11-88

Explicit and implicit information needs of people with depression: a qualitative investigation of problems reported on an online depression support forum
Cited by: 82
Author(s): Lisa J. Barney, Kathleen M Griffiths, Michelle Banfield
Software Mentions: 1
Published: about 15 years ago

10.1186/1471-244X-7-54

Lack of cortisol response in patients with posttraumatic stress disorder (PTSD) undergoing a diagnostic interview
Cited by: 27
Author(s): Iris‐Tatjana Kolassa, Cindy Eckart, Martina Ruf, Frank Neuner, Dominique J.‐F. de Quervain, Thomas Elbert
Software Mentions: 1
Published: over 18 years ago

10.1186/s12888-019-2395-x

Implementation research for public sector mental health care scale-up (SMART-DAPPER): a sequential multiple, assignment randomized trial (SMART) of non-specialist-delivered psychotherapy and/or medication for major depressive disorder and posttraumatic stress disorder (DAPPER) integrated with outpatient care clinics at a county hospital in Kenya
Cited by: 6
Author(s): Rachel Levy, Muthoni Mathai, Purba Chatterjee, Linnet Ongeri, Simon Njuguna, Dickens Onyango, Dickens Akena, Grace Rota, Ammon Otieno, Thomas C. Neylan, Hafsa Lukwata, James G. Kahn, Craig R. Cohen, David Bukusi, Gregory A. Aarons, Ray E. Burger, Kelly Blum, Inbal Nahum‐Shani, Charles E. McCulloch, Susan M. Meffert
Software Mentions: 1
Published: over 6 years ago

10.1186/s12888-015-0442-9

Affective reactions differ between Chinese and American healthy young adults: a cross-cultural study using the international affective picture system
Cited by: 19
Author(s): Jinwen Huang, Dongrong Xu, Bradley S. Peterson, Jianbo Hu, Linfeng Cao, Ning Wei, Yingran Zhang, Weijuan Xu, Yi Xu, Shaohua Hu
Software Mentions: 1
Published: about 11 years ago

10.1186/s12888-020-02787-7

Viewing an alpine environment positively affects emotional analytics in patients with somatoform, depressive and anxiety disorders as well as in healthy controls
Cited by: 2
Author(s): Katharina Hüfner, Cornelia Ower, Georg Kemmler, Theresa Vill, Caroline Martini, Aurore Schmitt, Barbara Sperner‐Unterweger
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12889-019-8064-7

Reframing healthy food choices: a content analysis of Australian healthy eating blogs
Cited by: 11
Author(s): Rebecca Mete, Jayne Curlewis, Alison Shield, Kristen Murray, Rachel Bacon, Jane Kellett
Software Mentions: 1
Published: over 6 years ago

10.1186/s12889-020-10070-3

A rapid review of the impact of COVID-19 on the mental health of healthcare workers: implications for supporting psychological well-being
Cited by: 449
Author(s): Johannes H. De Kock, Helen Ann Latham, Stephen J Leslie, Mark Grindle, Sarah Anne Munoz, Liz Ellis, Rob Polson, Christopher M O’Malley
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2458-11-24

Tackling health literacy: adaptation of public hypertension educational materials for an Indo-Asian population in Canada
Cited by: 39
Author(s): Charlotte Jones, Shefina Mawani, Kathryn M. King, Selina Allu, Megan A. Smith, Sailesh Mohan, Norman R.C. Campbell
Software Mentions: 1
Published: over 15 years ago

10.1186/s12889-021-10197-x

Development and usability of educational material about workplace particulate matter exposure
Cited by: 5
Author(s): Thomas A. M. Stege, John Bolte, Liesbeth Claassen, Daniëlle R. M. Timmermans
Software Mentions: 1
Published: over 5 years ago

10.1186/s12889-020-08657-x

Do we need to reconsider the CMAM admission and discharge criteria?; an analysis of CMAM data in South Sudan
Cited by: 3
Author(s): Eunyong Ahn, Cyprian Ouma, Mesfin Loha, Asrat Dibaba, Wendy Dyment, Jae Kwang Kim, Nam Seon Beck, Taesung Park
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2458-14-1244

Effectiveness of a combination prevention strategy for HIV risk reduction with men who have sex with men in Central America: a mid-term evaluation
Cited by: 21
Author(s): Rebecca Firestone, Jorge Rivas, Susana Lungo, Alejandra Cabrera, Susan Ruether, Jennifer Wheeler, Lung Vu
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2458-13-S3-S23

Treatment of severe and moderate acute malnutrition in low- and middle-income settings: a systematic review, meta-analysis and Delphi process
Cited by: 144
Author(s): Lindsey Lenters, Kerri Wazny, Patrick Webb, Tahmeed Ahmed, Zulfiqar A Bhutta
Software Mentions: 1
Published: almost 13 years ago

10.1186/1471-2458-6-68

Using consecutive Rapid Participatory Appraisal studies to assess, facilitate and evaluate health and social change in community settings
Cited by: 14
Author(s): Colin S Brown, Simon J Lloyd, Scott A Murray
Software Mentions: 1
Published: over 20 years ago

10.1186/1471-2458-14-704

Knowledge and acceptability of Chlamydia trachomatis screening among pregnant women and their partners; a cross-sectional study
Cited by: 10
Author(s): Monique Pereboom, Evelien Spelten, Judith Manniën, G. Ingrid J. G. Rours, Servaas A. Morré, François G. Schellevis, Eileen K. Hutton
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12890-015-0088-x

Identification of new biomarkers for Acute Respiratory Distress Syndrome by expression-based genome-wide association study
Cited by: 18
Author(s): Dmitry N. Grigoryev, Dilyara Cheranova, Suman Chaudhary, Daniel P. Heruth, Li Qin Zhang, Shui Q. Ye
Software Mentions: 1
Published: almost 11 years ago

10.1186/1756-0500-2-195

Parallel changes in gene expression in peripheral blood mononuclear cells and the brain after maternal separation in the mouse
Cited by: 36
Author(s): Johan van Heerden, Ana Conesa, Dan J. Stein, David Montaner, Vivienne A. Russell, Nicola Illing
Software Mentions: 1
Published: over 17 years ago

10.1186/1756-0500-5-27

BarraCUDA - a fast short read sequence aligner using graphics processing units
Cited by: 113
Author(s): Petr Klus, Simon Lam, Dag Lyberg, Ming Sin Cheung, Graham Pullan, Ian G. McFarlane, Giles S.H. Yeo, Brian Lam
Software Mentions: 1
Published: over 14 years ago

10.1186/s13104-015-1474-4

PSR: polymorphic SSR retrieval
Cited by: 10
Author(s): Concita Cantarella, Nunzio D’Agostino
Software Mentions: 1
Published: over 10 years ago

10.1186/1756-0500-7-676

jChIP: a graphical environment for exploratory ChIP-Seq data analysis
Cited by: 2
Author(s): Krzysztof Chojnowski, Krzysztof Goryca, Tymon Rubel, Michał Mikula
Software Mentions: 1
Published: over 11 years ago

10.1186/1756-0500-6-43

Intra-platform comparison of 25-mer and 60-mer oligonucleotide Nimblegen DNA microarrays
Cited by: 3
Author(s): Stéphane Fénart, Malika Chabi, Sophie Gallina, Rudy Huis, Godfrey Neutelings, Nathalie Rivière, Brigitte Thomasset, Simon Hawkins, Anca Lucau-Danila
Software Mentions: 1
Published: over 13 years ago

10.1186/s13104-016-2113-4

Thermodynamically optimal whole-genome tiling microarray design and validation
Cited by: 6
Author(s): Hyejin Cho, Hui‐Hsien Chou
Software Mentions: 1
Published: about 10 years ago

10.1186/1756-0500-7-360

Application of next generation sequencing to CEPH cell lines to discover variants associated with FDA approved chemotherapeutics
Cited by: 5
Author(s): Gunjan Hariani, Ernest J. Lam, Tammy M. Havener, Pui Yan Kwok, Howard L. McLeod, Michael J. Wagner, Alison A. Motsinger‐Reif
Software Mentions: 1
Published: about 12 years ago

10.1186/1756-0500-3-39

Interpretation of custom designed Illumina genotype cluster plots for targeted association studies and next-generation sequence validation
Cited by: 26
Author(s): Elizabeth A. Tindall, Desiree C. Petersen, Stina Nikolaysen, Webb Miller, Stephan C. Schuster, Vanessa M. Hayes
Software Mentions: 1
Published: over 16 years ago

10.1186/1756-0500-3-158

Animal Ca2+ release-activated Ca2+ (CRAC) channels appear to be homologous to and derived from the ubiquitous cation diffusion facilitators
Cited by: 18
Author(s): Madeleine Matias, Kenny M. Gomolplitinant, Dorjee G. Tamang, Milton H. Saier
Software Mentions: 1
Published: about 16 years ago

10.1186/1756-0500-3-24

Non-coding RNAs change their expression profile after Retinoid induced differentiation of the promyelocytic cell line NB4
Cited by: 28
Author(s): Annalisa Rossi, Oscar Fernando D’Urso, Graziana Gatto, Palmiro Poltronieri, Manuela Ferracin, Paolo Remondelli, Massimo Negrini, Maria Gabriella Caporaso, Stefano Bonatti, Massimo Mallardo
Software Mentions: 1
Published: over 16 years ago

10.1186/s13104-019-4764-4

Reliability of crowdsourcing as a method for collecting emotions labels on pictures
Cited by: 6
Author(s): Olga Korovina, Marcos Báez, Fabio Casati
Software Mentions: 1
Published: over 6 years ago

10.1186/s13104-016-2296-8

Immunoassay of S-adenosylmethionine and S-adenosylhomocysteine: the methylation index as a biomarker for disease and health status
Cited by: 22
Author(s): Xiujuan Hao, Yan Huang, Ming Qiu, Chunlin Yin, Haiyan Ren, Hongjie Gan, Huijun Li, Yaxia Zhou, Jiazhi Xia, Wenting Li, Lijuan Guo, Isaac Angres
Software Mentions: 1
Published: over 9 years ago

10.1186/2052-1847-6-6

Cardiac performance, biomarkers and gene expression studies in previously sedentary men participating in half-marathon training
Cited by: 8
Author(s): Danica D. Vance, Gordon L. Chen, Mark Stoutenberg, Robert J. Myerburg, Kevin A. Jacobs, Lubov Nathanson, Arlette C. Perry, David Seo, Pascal J. Goldschmidt‐Clermont, Evadnie Rampersaud
Software Mentions: 1
Published: over 12 years ago

10.1186/1472-6807-10-S1-S2

Prediction of protein long-range contacts using an ensemble of genetic algorithm classifiers with sequence profile centers
Cited by: 16
Author(s): Peng Chen, Jinyan Li
Software Mentions: 1
Published: over 16 years ago

10.1186/1471-2482-14-18

Use of human fibrin glue (Ti sseel) versus sta ples for mesh fixation in laparoscopic transabdominal preperitoneal hernioplasty (TISTA): a randomized controlled trial (NCT01641718)
Cited by: 2
Author(s): Sascha Müller, René Warschkow, Ulrich Beutner, Cornelia Lüthi, Kristjan Ukegjini, Bruno M. Schmied, Ignazio Tarantino
Software Mentions: 1
Published: about 12 years ago

10.1186/s12893-016-0126-5

Emergency radiological examination of the externally stabilized pelvis – there is a catch to it: lessons learned from two cases with symphyseal disruption despite initial inconspicuous computed tomography
Cited by: 3
Author(s): Jörg Bayer, Thorsten Hammer, Dirk Maier, Norbert P. Südkamp, Oliver Hauschild
Software Mentions: 1
Published: over 10 years ago

10.1186/1752-0509-5-2

Models of sequestration and receptor cross-talk for explaining multiple mutants in plant stem cell regulation
Cited by: 7
Author(s): Patrik Sahlin, Pontus Melke, Henrik Jönsson
Software Mentions: 1
Published: over 15 years ago

10.1186/1752-0509-5-52

A computational framework for gene regulatory network inference that combines multiple methods and datasets
Cited by: 33
Author(s): R. Gupta, Anna Stincone, Philipp Antczak, Sarah M. Durant, Roy Bicknell, Andréas Bikfalvi, Francesco Falciani
Software Mentions: 1
Published: about 15 years ago

10.1186/1752-0509-3-20

Using cell fate attractors to uncover transcriptional regulation of HL60 neutrophil differentiation
Cited by: 32
Author(s): Albert C. Huang, Limei Hu, Stuart Kauffman, Wei Zhang, Ilya Shmulevich
Software Mentions: 1
Published: over 17 years ago

10.1186/1752-0509-6-112

Detecting microRNAs of high influence on protein functional interaction networks: a prostate cancer case study
Cited by: 13
Author(s): Mohammed Alshalalfa, Gary D. Bader, Anna Goldenberg, Quaid Morris, Reda Alhajj
Software Mentions: 1
Published: over 14 years ago

10.1186/s12918-015-0215-6

Mathematical analysis of the regulation of competing methyltransferases
Cited by: 21
Author(s): Michael C. Reed, Mary V. Gamble, Megan N. Hall, H. Frederik Nijhout
Software Mentions: 1
Published: over 10 years ago

10.1186/1752-0509-3-11

A Drosophila systems model of pentylenetetrazole induced locomotor plasticity responsive to antiepileptic drugs
Cited by: 26
Author(s): Farhan Mohammad, Priyanka Singh, Abhay Sharma
Software Mentions: 1
Published: over 17 years ago

10.1186/1752-0509-7-S4-S1

A novel approach to minimize false discovery rate in genome-wide data analysis
Cited by: 2
Author(s): Yuanzhe Bei, Pengyu Hong
Software Mentions: 1
Published: over 13 years ago

10.1186/1752-0509-6-68

Identifying MicroRNA-mRNA regulatory network in colorectal cancer by a combination of expression profile and bioinformatics analysis
Cited by: 116
Author(s): Jihong Fu, Wentao Tang, Peng Du, Guanghui Wang, Wei Chen, Jingming Li, Yunxiang Zhu, Jun Gao, Long Cui
Software Mentions: 1
Published: about 14 years ago

10.1186/1752-0509-6-152

Clarifying off-target effects for torcetrapib using network pharmacology and reverse docking approach
Cited by: 32
Author(s): Shengjun Fan, Qiang Geng, Zhenyu Pan, Xin Li, Lu Tie, Yan Pan, Xuejun Li
Software Mentions: 1
Published: over 13 years ago

10.1186/1752-0509-4-177

Individual vs. combinatorial effect of elevated CO2 conditions and salinity stress on Arabidopsis thaliana liquid cultures: Comparing the early molecular response using time-series transcriptomic and metabolomic analyses
Cited by: 52
Author(s): Harin Kanani, Bhaskar Dutta, Maria I. Klapa
Software Mentions: 1
Published: over 15 years ago

10.1186/1752-0509-5-158

Prioritizing cancer-related genes with aberrant methylation based on a weighted protein-protein interaction network
Cited by: 22
Author(s): Liu Hui, Jianzhong Su, Junhua Li, Hongbo Liu, Jie Lv, Boyan Li, Hong Qiao, Yan Zhang
Software Mentions: 1
Published: over 14 years ago

10.1186/1752-0509-7-120

Transcription factors and genetic circuits orchestrating the complex, multilayered response of Clostridium acetobutylicum to butanol and butyrate stress
Cited by: 65
Author(s): Qinghua Wang, Keerthi P. Venkataramanan, Hongzhan Huang, Eleftherios T. Papoutsakis, Cathy H. Wu
Software Mentions: 1
Published: over 12 years ago

10.1186/1752-0509-4-51

Identifying mRNA targets of microRNA dysregulated in cancer: with application to clear cell Renal Cell Carcinoma
Cited by: 229
Author(s): Huiqing Liu, A. Rose Brannon, Anupama Reddy, Gabriela Alexe, Michael Seiler, Alexandra Arreola, Jay Oza, Ming Yao, David Juan, Louis S. Liou, Shridar Ganesan, Arnold J. Levine, W. Kimryn Rathmell, Gyan Bhanot
Software Mentions: 1
Published: about 16 years ago

10.1186/1752-0509-5-99

Integrative network analysis reveals active microRNAs and their functions in gastric cancer
Cited by: 79
Author(s): Chien Wei Tseng, Lin Chen, Chiung Nien Chen, Hsuan‐Cheng Huang, Hsueh‐Fen Juan
Software Mentions: 1
Published: almost 15 years ago

10.1186/1752-0509-7-S2-S10

HSA: A Heuristic Splice Alignment Tool
Cited by: 7
Author(s): Jingde Bu, Xuebin Chi, Zhong Jin
Software Mentions: 1
Published: over 12 years ago

10.1186/1752-0509-8-S2-S8

A diVIsive Shuffling Approach (VIStA) for gene expression analysis to identify subtypes in Chronic Obstructive Pulmonary Disease
Cited by: 23
Author(s): Jörg Menche, Amitabh Sharma, Michael H. Cho, Ruth Mayer, Stephen I. Rennard, Bartolomé R. Celli, Bruce E. Miller, Nick Locantore, Ruth Tal‐Singer, Soumitra Ghosh, Chris Larminie, Glyn Bradley, John Riley, Àlvar Agustí, Edwin K. Silverman, Albert‐László Barabási
Software Mentions: 1
Published: over 12 years ago

10.1186/s12917-016-0904-4

A frameshift mutation in MOCOS is associated with familial renal syndrome (xanthinuria) in Tyrolean Grey cattle
Cited by: 12
Author(s): Leonardo Murgiano, Vidhya Jagannathan, Christian Piffer, Inmaculada Diez-Prieto, Marilena Bolcato, Arcangelo Gentile, Cord Drögemüller
Software Mentions: 1
Published: over 9 years ago

10.1186/1746-6148-6-49

Ovine serum biomarkers of early and late phase scrapie
Cited by: 14
Author(s): Isabelle Batxelli-Molina, Nicolas Salvetat, Olivier Andréoletti, Luc Guerrier, Guillaume Vicat, Franck Molina, Chantal Mourton-Gilles
Software Mentions: 1
Published: over 16 years ago

10.1186/1746-6148-8-205

Transcriptomic markers meet the real world: finding diagnostic signatures of corticosteroid treatment in commercial beef samples
Cited by: 10
Author(s): Sara Pegolo, Guglielmo Gallina, Clara Montesissa, Francesca Capolongo, Serena Ferraresso, Caterina Pellizzari, Lisa Poppi, Massimo Castagnaro, Luca Bargelloni
Software Mentions: 1
Published: over 13 years ago

10.1186/1746-6148-8-65

Evaluating observer agreement of scoring systems for foot integrity and footrot lesions in sheep
Cited by: 23
Author(s): Alessandro Foddai, Laura Green, Sarah Mason, Jasmeet Kaler
Software Mentions: 1
Published: about 14 years ago

10.1136/bmjgh-2020-002613

Long-term outcomes for children with disability and severe acute malnutrition in Malawi
Cited by: 8
Author(s): Natasha Lelijveld, Nora Groce, Seema Patel, Theresa Nnensa, Emmanuel Chimwezi, Melissa Gladstone, Macpherson Mallewa, Jonathan C. K. Wells, Andrew Seal, Marko Kerac
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms7110499

Elucidating Escherichia Coli O157:H7 Colonization and Internalization in Cucumbers Using an Inverted Fluorescence Microscope and Hyperspectral Microscopy
Cited by: 6
Author(s): Yeting Sun, Dan Wang, Yue Ma, Hongyang Guan, Hao Liang, Xiaoyan Zhao
Software Mentions: 1
Published: over 6 years ago

10.1038/s41378-020-00219-w

Using intracellular plasmonics to characterize nanomorphology in human cells
Cited by: 10
Author(s): Ahmad Sohrabi Kashani, Alisa Piekny, Muthukumaran Packirisamy
Software Mentions: 1
Published: over 5 years ago

10.1080/23802359.2019.1667279

The complete mitochondrial genome of Ceutorhynchus obstrictus (Marsham, 1802) (Coleoptera: Curculionidae)
Cited by: 4
Author(s): Hyobin Lee, Jong‐Hyun Park, Jieun Lee, Ki–Jeong Hong, Jongsun Park, Wonhoon Lee
Software Mentions: 1
Published: almost 7 years ago

10.1080/23802359.2020.1866450

Inheritance of <i>Solanum</i> chloroplast genomic DNA in interspecific hybrids
Cited by: 4
Author(s): Dandan Li, Guiyun Gan, Weiliu Li, Wenjia Li, Yaqin Jiang, Xuyu Liang, Yu Ning, Riyuan Chen, Yikui Wang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41379-019-0279-8

Whole exome sequencing reveals mutations in FAT1 tumor suppressor gene clinically impacting on peripheral T-cell lymphoma not otherwise specified
Cited by: 37
Author(s): Maria Antonella Laginestra, Luciano Cascione, Giovanna Motta, Fabio Fuligni, Claudio Agostinelli, Mosé Rossi, Maria Rosaria Sapienza, Simona Righi, Alessandro Broccoli, Valentina Indio, Federica Melle, Valentina Tabanelli, Angelica Calleri, Domenico Novero, Fabio Facchetti, Giorgio Inghirami, Elena Sabattini, Francesco Bertoni, Stefano Pileri
Software Mentions: 1
Published: over 6 years ago

10.1093/molbev/msw224

Genome-Wide Biases in the Rate and Molecular Spectrum of Spontaneous Mutations in<i>Vibrio cholerae</i>and<i>Vibrio fischeri</i>
Cited by: 69
Author(s): Marcus M. Dillon, Way Sung, Robert Sebra, Michael Lynch, Vaughn S. Cooper
Software Mentions: 1
Published: over 9 years ago

10.1186/s13041-015-0133-y

Circulating miRNAs profiles in tourette syndrome: molecular data and clinical implications
Cited by: 26
Author(s): Renata Rizzo, Marco Ragusa, Cristina Barbagallo, M. Sammito, Mariangela Gulisano, Paola V. Calì, Claudio Pappalardo, Martina Barchitta, Mariagrazia Granata, Angelo Giuseppe Condorelli, Davide Barbagallo, Marina Scalia, Antonella Agodi, Cinzia Di Pietro, Michele Purrello
Software Mentions: 1
Published: almost 11 years ago

10.1186/1476-4598-5-24

Cited by: 642
Author(s): Michael D. Mattie, Christopher C. Benz, Jessica Bowers, Kelly Sensinger, Linda Wong, Gary K. Scott, Vita Fedele, David G. Ginzinger, Robert C. Getts, Chris Haqq
Software Mentions: 1
Published: over 20 years ago

10.1186/1476-4598-7-92

Gene expression deregulation by KRAS G12D and G12V in a BRAF V600E context
Cited by: 33
Author(s): Massimiliano Monticone, Emanuela Biollo, Massimo Maffei, Alessandra Donadini, Francesco Romeo, Clelia Tiziana Storlazzi, Walter Giaretti, Patrizio Castagnola
Software Mentions: 1
Published: over 17 years ago