cran: SAM | Projects | Ecosyste.ms: Papers

10.1155/2015/492395

Transcriptomic Analysis of mRNAs in Human Monocytic Cells Expressing the HIV-1 Nef Protein and Their Exosomes
Cited by: 31
Author(s): Madeeha Aqil, Saurav Mallik, Sanghamitra Bandyopadhyay, Ujjwal Maulik, Shahid Jameel
Software Mentions: 1
Published: over 11 years ago

10.1155/2018/8475463

Siji Antiviral Mixture Protects against CA16 Induced Brain Injury through Inhibiting PERK/STAT3/NF-κB Pathway
Cited by: 1
Author(s): Huimin Xiao, Ruiyang Zhao, Yue He, Yang Liu, Qin He, Siwang Wang, Fei Chen
Software Mentions: 1
Published: about 8 years ago

10.1155/2020/8595473

Contributions of Gene Modules Regulated by Essential Noncoding RNA in Colon Adenocarcinoma Progression
Cited by: 0
Author(s): Chunhua Li, Xihe Yu, Jianping Lu, Lei Zheng, Dahua Xu, Zelong Xu, Liqiang Wang, Ying Cui, Yeshuang Li, Hong Wang, Jiankai Xu, Kongning Li
Software Mentions: 1
Published: over 6 years ago

10.1155/2013/317926

Profiling of Hepatocellular Carcinoma Cell Cycle Regulating Genes Targeted by Calycosin
Cited by: 14
Author(s): Dongqing Zhang, Shufang Wang, Li Zhu, Yao Tian, Haibao Wang, Yuan Zhuang, Yu Li, Deqing Wang
Software Mentions: 1
Published: over 13 years ago

10.1155/2015/625192

Age-Specific Gene Expression Profiles of Rhesus Monkey Ovaries Detected by Microarray Analysis
Cited by: 8
Author(s): Hengxi Wei, Xiangjie Liu, Jihong Yuan, Li Li, Dongdong Zhang, Xiaolong Guo, Lin Liu, Shouquan Zhang
Software Mentions: 1
Published: over 11 years ago

10.1155/2015/949624

Transcriptional Changes Associated with Long-Term Left Ventricle Volume Overload in Rats: Impact on Enzymes Related to Myocardial Energy Metabolism
Cited by: 9
Author(s): Élise Roussel, Marie‐Claude Drolet, Élisabeth Walsh-Wilkinson, Wahiba Dhahri, Dominic Lachance, Suzanne Gascon, Otman Sarrhini, Jacques Rousseau, Roger Lecomte, Jacques Couët, Marie Arsenault
Software Mentions: 1
Published: over 11 years ago

10.1155/2019/3843295

Breast Tumor Detection and Classification Using Intravoxel Incoherent Motion Hyperspectral Imaging Techniques
Cited by: 6
Author(s): Si-Wa Chan, Yung-Chieh Chang, Po-Chiun Huang, Yen-Chieh Ouyang, Yu-Tzu Chang, Ruey-Feng Chang, Jyh‐Wen Chai, Clayton Chi‐Chang Chen, Hsian‐Min Chen, Chein‐I Chang, Chia-Chieh Lin
Software Mentions: 1
Published: about 7 years ago

10.1155/2014/543673

Complex Network-Driven View of Genomic Mechanisms Underlying Parkinson’s Disease: Analyses in Dorsal Motor Vagal Nucleus, Locus Coeruleus, and Substantia Nigra
Cited by: 22
Author(s): Beatriz Raposo Corradini, Priscila Iamashita, Edilaine Tampellini, José Marcelo Farfel, Lea T. Grinberg, Carlos Alberto Moreira-Filho
Software Mentions: 1
Published: over 12 years ago

10.1155/2018/5895628

Global, Survival, and Apoptotic Transcriptome during Mouse and Human Early Embryonic Development
Cited by: 9
Author(s): D. Haouzi, I. Boumela, Karim Chébli, S. Hamamah
Software Mentions: 1
Published: almost 8 years ago

10.1155/2015/561819

Targeted Next-Generation Sequencing Reveals Hot Spots and Doubly Heterozygous Mutations in Chinese Patients with Familial Cardiomyopathy
Cited by: 9
Author(s): Yue Zhao, Yue Feng, Yunmei Zhang, Xiaoqing Ding, Yuzhu Song, A-Mei Zhang, Li Liu, Hong Zhang, Jindong Ding, Xueshan Xia
Software Mentions: 1
Published: over 11 years ago

10.1155/2017/6423021

Bioinformatics Genes and Pathway Analysis for Chronic Neuropathic Pain after Spinal Cord Injury
Cited by: 36
Author(s): Guan Zhang, Ping Yang
Software Mentions: 1
Published: over 9 years ago

10.1155/2016/6125204

Structural and Histochemical Alterations in the Aortic Valves of Elderly Patients: A Comparative Study of Aortic Stenosis, Aortic Regurgitation, and Normal Valves
Cited by: 19
Author(s): Katsutoshi Miura, Hideki Katoh
Software Mentions: 1
Published: over 10 years ago

10.1155/2014/171487

Alteration of Interictal Brain Activity in Patients with Temporal Lobe Epilepsy in the Left Dominant Hemisphere: A Resting-State MEG Study
Cited by: 4
Author(s): Haitao Zhu, Jing Zhu, Tiezhu Zhao, Yong Wu, Hongyi Liu, Ting Wu, Lu Yang, Yuanjie Zou, Rui Zhang, Gang Zheng
Software Mentions: 1
Published: over 12 years ago

10.1155/2014/527029

Survey of Network-Based Approaches to Research of Cardiovascular Diseases
Cited by: 8
Author(s): Anida Sarajlić, Nataša Pržulj
Software Mentions: 1
Published: over 12 years ago

10.1155/2014/850802

ECR-MAPK Regulation in Liver Early Development
Cited by: 4
Author(s): Xiu-Ju Zhao, Hexian Zhuo
Software Mentions: 1
Published: over 12 years ago

10.1155/2013/354582

Comparative Gene Expression Profiling in Human Cumulus Cells according to Ovarian Gonadotropin Treatments
Cited by: 33
Author(s): Saïd Assou, D. Haouzi, H. Déchaud, Anna Gala, A. Ferrières, S. Hamamah
Software Mentions: 1
Published: over 13 years ago

10.1155/2014/651751

Microarray-Based RNA Profiling of Breast Cancer: Batch Effect Removal Improves Cross-Platform Consistency
Cited by: 19
Author(s): Martin Jakob Larsen, Mads Thomassen, Qihua Tan, Kristina Pilekær Sørensen, Torben A. Kruse
Software Mentions: 1
Published: over 12 years ago

10.1155/2014/951937

Endometrial Receptivity Profile in Patients with Premature Progesterone Elevation on the Day of hCG Administration
Cited by: 46
Author(s): D. Haouzi, Laurence Bissonnette, Anna Gala, Saïd Assou, Frida Entezami, Hélène Perrochia, H. Déchaud, Jean‐Noël Hugues, S. Hamamah
Software Mentions: 1
Published: over 12 years ago

10.1155/2013/317912

Development of Pineapple Microsatellite Markers and Germplasm Genetic Diversity Analysis
Cited by: 13
Author(s): Shuo Feng, Tong HeLin, Chun‐Xiang You, Jingyi Wang, Yeyuan Chen, Guangming Sun, Jun He, Yan Wu
Software Mentions: 1
Published: over 13 years ago

10.1155/2014/536591

Computational Analysis of mRNA Expression Profiles Identifies theITGFamily andPIK3R3as Crucial Genes for Regulating Triple Negative Breast Cancer Cell Migration
Cited by: 13
Author(s): Sukhontip Klahan, Mei-Shin Wu, Edward Hsi, Chi‐Cheng Huang, Ming‐Feng Hou, Wei Chiao Chang
Software Mentions: 1
Published: over 12 years ago

10.1155/2016/8208904

Expression of Migration-Related Genes in Human Colorectal Cancer and Activity of a Disintegrin and Metalloproteinase 17
Cited by: 19
Author(s): Katarzyna Walkiewicz, Paweł Kozieł, Martyna Bednarczyk, Adam Błażelonis, Urszula Mazurek, Małgorzata Muc-Wierzgoń
Software Mentions: 1
Published: over 10 years ago

10.1155/2014/138410

msiDBN: A Method of Identifying Critical Proteins in Dynamic PPI Networks
Cited by: 4
Author(s): Yuan Zhang, Nan Du, Kang Li, Jinchao Feng, Kebin Jia, Aidong Zhang
Software Mentions: 1
Published: over 12 years ago

10.7603/s40681-014-0010-5

Coronary artery aneurysms occurrence risk analysis between Kawasaki disease and LRP1B gene in Taiwanese children
Cited by: 8
Author(s): Ying Lin, Xiang Liu, Jen‐Ping Chang, Wen Kuei Chien, Jin Hua Chen, Hsinyi Tsang, Chien Hui Hung, Ting Hsu Lin, Shaohui Huang, Chien-Chang Liao, Cheng Wen Lin, Tsung Jung Ho, Fuu Jen Tsai
Software Mentions: 1
Published: over 12 years ago

10.3390/biomedicines9091258

Master Regulators of Epithelial-Mesenchymal Transition and WNT Signaling Pathways in Juvenile Nasopharyngeal Angiofibromas
Cited by: 2
Author(s): Naiade Calanca, Sara Martoreli Silveira Binato, Sabrina Daniela da Silva, Helena Brentani, Luiz Ubirajara Sennes, Clóvis Antônio Lopes Pinto, Maria Aparecida Custódio Domingues, Carlos Eduardo Fonseca-Alves, Cláudia Aparecida Rainho, Sílvia Regina Rogatto
Software Mentions: 1
Published: almost 5 years ago

10.3390/biom6040042

CoverageAnalyzer (CAn): A Tool for Inspection of Modification Signatures in RNA Sequencing Profiles
Cited by: 16
Author(s): Ralf Hauenschild, Stephan Werner, Lyudmil Tserovski, Andreas Hildebrandt, Yuri Motorin, Mark Helm
Software Mentions: 1
Published: almost 10 years ago

10.3390/biom7010003

DNA Methylation Targeting: The DNMT/HMT Crosstalk Challenge
Cited by: 93
Author(s): Omar Castillo-Aguilera, Patrick Depreux, Ludovic Halby, Paola B. Arimondo, Laurence Goossens
Software Mentions: 1
Published: over 9 years ago

10.1042/BSR20181016

The effect of HMGB1 on the clinicopathological and prognostic features of cervical cancer
Cited by: 12
Author(s): Li Pan, Meng-Fei Xu, Hongwei Cai, Niresh Thapa, Cancan He, Zhen Song
Software Mentions: 1
Published: over 7 years ago

10.3390/bios10110162

Carbon-Based Quantum Dots for Electrochemical Detection of Monoamine Neurotransmitters—Review
Cited by: 15
Author(s): Saheed E. Elugoke, Abolanle S. Adekunle, Omolola E. Fayemi, Bhekie B. Mamba, El‐Sayed M. Sherif, Eno E. Ebenso
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13068-015-0415-8

SorGSD: a sorghum genome SNP database
Cited by: 41
Author(s): Hong Luo, Wenming Zhao, Yanqing Wang, Yan Xia, Xiaoyuan Wu, Limin Zhang, Bixia Tang, Junwei Zhu, Fang Lü, Zhenglin Du, Wubishet A. Bekele, Shuaishuai Tai, David R. Jordan, Ian D. Godwin, Rod J. Snowdon, Emma Mace, Hai‐Chun Jing, Jianxun Luo
Software Mentions: 1
Published: over 10 years ago

10.1186/s13068-015-0260-9

Complex and extensive post-transcriptional regulation revealed by integrative proteomic and transcriptomic analysis of metabolite stress response in Clostridium acetobutylicum
Cited by: 30
Author(s): Keerthi P. Venkataramanan, Lie Min, Shuyu Hou, Shawn W. Jones, Matthew T. Ralston, Kelvin H. Lee, Eleftherios T. Papoutsakis
Software Mentions: 1
Published: over 11 years ago

10.1186/s13068-019-1554-0

Metabolic engineering of Bacillus amyloliquefaciens for enhanced production of S-adenosylmethionine by coupling of an engineered S-adenosylmethionine pathway and the tricarboxylic acid cycle
Cited by: 15
Author(s): Liying Ruan, Lü Li, Dian Zou, Cong Jiang, Zhiyou Wen, Shouwen Chen, Yu Deng, Xuetuan Wei
Software Mentions: 1
Published: about 7 years ago

10.1186/1754-6834-7-31

Transcriptional comparison of the filamentous fungus Neurospora crassagrowing on three major monosaccharides D-glucose, D-xylose and L-arabinose
Cited by: 53
Author(s): Jingen Li, Liangcai Lin, Yong Li, Chaoguang Tian, Yanhe Ma
Software Mentions: 1
Published: over 12 years ago

10.1038/boneres.2017.30

New insights into the vitamin D requirements during pregnancy
Cited by: 84
Author(s): Bruce W. Hollis, Carol L. Wagner
Software Mentions: 1
Published: about 9 years ago

10.1038/s41416-019-0725-x

Anti-VEGF therapy resistance in ovarian cancer is caused by GM-CSF-induced myeloid-derived suppressor cell recruitment
Cited by: 57
Author(s): Naoki Horikawa, Kaoru Abiko, Noriomi Matsumura, Tsukasa Baba, Junzo Hamanishi, Ken Yamaguchi, Ryusuke Murakami, Mana Taki, Masao Ukita, Yuko Hosoe, Masafumi Koshiyama, Ikuo Konishi, Masaki Mandai
Software Mentions: 1
Published: over 6 years ago

10.1038/s41416-021-01377-y

The circulating soluble form of the CD40 costimulatory immune checkpoint receptor and liver metastasis risk in rectal cancer
Cited by: 7
Author(s): Sebastian Meltzer, Annette Torgunrud, Hanna Abrahamsson, Arne M. Solbakken, Kjersti Flatmark, Svein Dueland, Kine Mari Bakke, Paula A. Bousquet, Anne Negård, Christin Johansen, Lars Gustav Lyckander, Finn Ole Larsen, Jesper Sølver Schou, Kathrine Røe Redalen, Anne Hansen Ree
Software Mentions: 1
Published: over 5 years ago

10.1038/bjc.2017.102

Decreased levels of baseline and drug-induced tubulin polymerisation are hallmarks of resistance to taxanes in ovarian cancer cells and are associated with epithelial-to-mesenchymal transition
Cited by: 36
Author(s): George E. Durán, Yan C. Wang, François Moisan, E. Brian Francisco, Branimir I. Šikić
Software Mentions: 1
Published: over 9 years ago

10.1002/brb3.686

Resting state and personality component (BIS/BAS) predict the brain activity (EEG and fNIRS measure) in response to emotional cues
Cited by: 24
Author(s): Michela Balconi, Maria Elide Vanutelli, Elisabetta Grippa
Software Mentions: 1
Published: over 9 years ago

10.1007/s40708-017-0069-3

Emotion recognition based on EEG features in movie clips with channel selection
Cited by: 89
Author(s): Mehmet Siraç Özerdem, Hasan Polat
Software Mentions: 1
Published: about 9 years ago

10.3390/brainsci11010035

Oscillatory EEG Signatures of Affective Processes during Interaction with Adaptive Computer Systems
Cited by: 3
Author(s): Mathias Vukelić, Katharina Lingelbach, Kathrin Pollmann, Matthias Peißner
Software Mentions: 1
Published: over 5 years ago

10.3390/brainsci11020128

The Influence of Video Format on Engagement and Performance in Online Learning
Cited by: 18
Author(s): Sergej Lackmann, Pierre-Majorique Léger, Patrick Charland, Caroline Aubé, Jean Talbot
Software Mentions: 1
Published: over 5 years ago

10.3390/brainsci8080157

Magnetoencephalography: Clinical and Research Practices
Cited by: 9
Author(s): Jennifer R. Stapleton-Kotloski, Robert J. Kotloski, Gautam Popli, Dwayne W. Godwin
Software Mentions: 1
Published: about 8 years ago

10.3390/brainsci6010001

REM-Enriched Naps Are Associated with Memory Consolidation for Sad Stories and Enhance Mood-Related Reactivity
Cited by: 35
Author(s): Médhi Gilson, Gaétane Deliens, Rachel Leproult, Alice Bodart, Antoine Nonclercq, Rudy Ercek, Philippe Peigneux
Software Mentions: 1
Published: over 10 years ago

10.3390/brainsci11020274

A Muscular and Cerebral Physiological Indices Assessment for Stress Measuring during Virtual Wheelchair Guidance
Cited by: 2
Author(s): Mohamed Moncef Ben Khelifa, Hachem A. Lamti, Vincent Hugel
Software Mentions: 1
Published: over 5 years ago

10.1590/1414-431X20209021

Expression of CHPF modulates cell proliferation and invasion in lung cancer
Cited by: 6
Author(s): Chengsong Cao, Yong Liu, Qun Wang, Jing Zhao, Ming Shi, Jian Zheng
Software Mentions: 1
Published: over 6 years ago

10.1186/bcr1732

Molecular response to aromatase inhibitor treatment in primary breast cancer
Cited by: 109
Author(s): Alan Mackay, Ander Urruticoechea, JM Dixon, Tim Dexter, Kerry Fenwick, Alan Ashworth, Suzanne Drury, Alexey Larionov, Oliver Young, Sharon White, William R. Miller, Dean B. Evans, Mitch Dowsett
Software Mentions: 1
Published: over 19 years ago

10.1186/bcr2590

Molecular subtypes of breast cancer are associated with characteristic DNA methylation patterns
Cited by: 251
Author(s): Karolina Holm, Cecilia Hegardt, Johan Staaf, Johan Vallon‐Christersson, Göran Jönsson, Håkan Olsson, Åke Borg, Markus Ringnér
Software Mentions: 1
Published: over 16 years ago

10.1186/s13058-014-0415-9

A joint analysis of metabolomics and genetics of breast cancer
Cited by: 150
Author(s): Xiaohu Tang, Chao-Chieh Lin, Ivan Spasojević, Edwin S. Iversen, Jen-Tsan Chi, Jeffrey R. Marks
Software Mentions: 1
Published: about 12 years ago

10.12669/pjms.335.12990

Vitamin D supplementation improves FEV1 in patients of Bronchial Asthma
Cited by: 8
Author(s): Muhammad Zafar Majeed Babar, Mazhar Hussain, Sadia Majeed
Software Mentions: 1
Published: almost 9 years ago

10.1017/S0031182016001797

Rumen fluke (Calicophoron daubneyi) on Welsh farms: prevalence, risk factors and observations on co-infection withFasciola hepatica
Cited by: 44
Author(s): Rhys Aled Jones, Peter M. Brophy, Erik T. Mitchell, H. Williams
Software Mentions: 1
Published: almost 10 years ago

10.1186/1756-3305-5-162

Analysis of Babesia bovis infection-induced gene expression changes in larvae from the cattle tick, Rhipicephalus (Boophilus) microplus
Cited by: 22
Author(s): Andrew M. Heekin, Felix D. Guerrero, Kylie G. Bendele, Leo Saldivar, Glen A. Scoles, Cedric Gondro, Vishvanath Nene, Appolinaire Djikeng, Kelly A. Brayton
Software Mentions: 1
Published: about 14 years ago

10.1186/s13071-015-0914-2

Phlebotomus papatasi SP15: mRNA expression variability and amino acid sequence polymorphisms of field populations
Cited by: 16
Author(s): Marcelo Ramalho-Ortigão, Iliano V. Coutinho-Abreu, Valdir Queiroz Balbino, Carlos Alberto Santiago Figueirêdo, Rami Mukbel, Hussan Dayem, Hanafi A. Hanafi, Shabaan S. El-Hossary, Emad El Din Y. Fawaz, Mahmoud N. Abo‐Shehada, David F. Hoel, Gwen Stayback, Mariha Wadsworth, Douglas A. Shoue, Jenica Abrudan, Neil F. Lobo, Andrew R. Mahon, Scott J. Emrich, Shaden Kamhawi, Frank H. Collins, Mary Ann McDowell
Software Mentions: 1
Published: over 11 years ago

10.1186/s13071-018-2816-6

Molecular and morphological characterisation of Pharyngostrongylus kappa Mawson, 1965 (Nematoda: Strongylida) from Australian macropodid marsupials with the description of a new species, P. patriciae n. sp.
Cited by: 1
Author(s): Tanapan Sukee, Ian Beveridge, Abdul Jabbar
Software Mentions: 1
Published: over 8 years ago

10.1186/s13071-016-1544-z

The persistence and ecological impacts of a cyanobacterium genetically engineered to express mosquitocidal Bacillus thuringiensis toxins
Cited by: 0
Author(s): Irene Ketseoglou, Gustav Bouwer
Software Mentions: 1
Published: over 10 years ago

10.1186/s13071-019-3578-5

Redescription and molecular characterisation of the fish ectoparasite Anilocra capensis Leach, 1818 (Isopoda: Cymothoidae), with description of six new species of Anilocra Leach, 1818 from Africa
Cited by: 13
Author(s): Rachel L. Welicky, Nico J. Smit
Software Mentions: 1
Published: about 7 years ago

10.1186/1756-3305-6-276

The ovarian transcriptome of the cattle tick, Rhipicephalus (Boophilus) microplus, feeding upon a bovine host infected with Babesia bovis
Cited by: 24
Author(s): Andrew M. Heekin, Felix D. Guerrero, Kylie G. Bendele, Leo Saldivar, Glen A. Scoles, Scot E. Dowd, Cedric Gondro, Vishvanath Nene, Appolinaire Djikeng, Kelly A. Brayton
Software Mentions: 1
Published: almost 13 years ago

10.1080/20010001.2018.1516072

Evaluation of aging, diabetes mellitus, and skin wounds by scanning acoustic microscopy with protease digestion
Cited by: 5
Author(s): Katsutoshi Miura, Kensuke Yamashita
Software Mentions: 1
Published: over 8 years ago

10.20411/pai.v6i2.461

Lack of Atorvastatin Effect on Monocyte Gene Expression and Inflammatory Markers in HIV-1- infected ART-suppressed Individuals at Risk of non-AIDS Comorbidities
Cited by: 1
Author(s): Anjana Yadav, Andrew V. Kossenkov, Louise C. Showe, Sarah J. Ratcliffe, Grace Choi, Luis J. Montaner, Pablo Tebas, Pamela A. Shaw, Ronald G. Collman
Software Mentions: 1
Published: about 5 years ago

10.1007/s12253-020-00865-5

Metabolic Parameters as Predictors for Progression Free and Overall Survival of Patients with Metastatic Colorectal Cancer
Cited by: 6
Author(s): Zsuzsanna Németh, W. Wijker, Zsolt Lengyel, Erika Hitre, Katalin Borbély
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.49

A new 12-gene diagnostic biomarker signature of melanoma revealed by integrated microarray analysis
Cited by: 55
Author(s): Wanting Liu, Yonghong Peng, Desmond J. Tobin
Software Mentions: 1
Published: over 13 years ago

10.7717/peerj.788

Loss of CITED1, an MITF regulator, drives a phenotype switchin vitroand can predict clinical outcome in primary melanoma tumours
Cited by: 19
Author(s): Jill Howlin, Helena Cirenajwis, Barbara Lettiero, Johan Staaf, Martin Lauss, Lao H. Saal, Åke Borg, Sofia K. Gruvberger-Saal, Göran Jönsson
Software Mentions: 1
Published: over 11 years ago

10.7717/peerj.9338

URMAP, an ultra-fast read mapper
Cited by: 7
Author(s): Robert C. Edgar
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.8349

Multiple genome pattern analysis and signature gene identification for the Caucasian lung adenocarcinoma patients with different tobacco exposure patterns
Cited by: 1
Author(s): Yanmei Dong, Li-da Qin, Yifan Tong, Qian He, Ling Wang, Kai Song
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.6116

Elevational patterns of the percentages of plant genera with tropical and temperate affinities in Nepal
Cited by: 1
Author(s): Yunyun Lai, Jianmeng Feng
Software Mentions: 1
Published: over 7 years ago

10.7717/peerj.808

Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space
Cited by: 33
Author(s): Richard Wilton, Tamás Budavàri, Ben Langmead, Sarah J. Wheelan, Steven L. Salzberg, Alexander S. Szalay
Software Mentions: 1
Published: over 11 years ago

10.7717/peerj.7314

Mitochondrial DNA in human identification: a review
Cited by: 56
Author(s): António Amorim, Teresa Fernandes, Nuno Taveira
Software Mentions: 1
Published: about 7 years ago

10.7717/peerj.3932

Influence of current climate, historical climate stability and topography on species richness and endemism in Mesoamerican geophyte plants
Cited by: 39
Author(s): Victoria Sosa, Israel Loera
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.4061

Levels of detail analysis of microwave scattering from human head models for brain stroke detection
Cited by: 10
Author(s): Awais Munawar Qureshi, Zartasha Mustansar
Software Mentions: 1
Published: almost 9 years ago

10.7717/peerj.1743

Effects of personal relevance and simulated darkness on the affective appraisal of a virtual environment
Cited by: 8
Author(s): Alexander Toet, J.M. Houtkamp, Paul E. Vreugdenhil
Software Mentions: 1
Published: over 10 years ago

10.7717/peerj.2636

Elevational pattern of bird species richness and its causes along a central Himalaya gradient, China
Cited by: 38
Author(s): Xinyuan Pan, Zhifeng Ding, Yiming Hu, Jiankun Liang, Yongjie Wu, Xingfeng Si, Guo Ming-fang, Huijian Hu, Kazutaka Jin
Software Mentions: 1
Published: almost 10 years ago

10.7717/peerj.438

Continental variation in wing pigmentation inCalopteryxdamselflies is related to the presence of heterospecifics
Cited by: 12
Author(s): Christopher Hassall
Software Mentions: 1
Published: over 12 years ago

10.7717/peerj.990

Profiling and initial validation of urinary microRNAs as biomarkers in IgA nephropathy
Cited by: 33
Author(s): Nannan Wang, Rongfa Bu, Zhi-Yu Duan, Xueguang Zhang, Pu Chen, Zuoxiang Li, Jie Wu, Guangyan Cai, Xiangmei Chen
Software Mentions: 1
Published: over 11 years ago

10.7717/peerj.380

Effect of nutrition survey ‘cleaning criteria’ on estimates of malnutrition prevalence and disease burden: secondary data analysis
Cited by: 40
Author(s): Sonya Crowe, Andrew Seal, Carlos Grijalva-Eternod, Marko Kerac
Software Mentions: 1
Published: over 12 years ago

10.7717/peerj.11642

A new HSI denoising method via interpolated block matching 3D and guided filter
Cited by: 1
Author(s): Ping Xu, Bingqiang Chen, Jingcheng Zhang, Lei Xue, Lei Zhu
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.7591

Negative emotional state slows down movement speed: behavioral and neural evidence
Cited by: 8
Author(s): Xiawen Li, Guanghui Zhang, Changle Zhou, Xiaochun Wang
Software Mentions: 1
Published: almost 7 years ago

10.7717/peerj.3850

Historical dynamics and current environmental effects explain the spatial distribution of species richness patterns of New World monkeys
Cited by: 4
Author(s): Paulo Vallejos-Garrido, Reinaldo Rivera, Oscar Inostroza‐Michael, Enrique Rodríguez‐Serrano, Cristián E. Hernández
Software Mentions: 1
Published: almost 9 years ago

10.3390/pharmacy6030077

An Evidence-Based Procedure for Self-Management of Medication in Hospital: Development and Validation of the SelfMED Procedure
Cited by: 8
Author(s): Toke Vanwesemael, Tinne Dilles, Bart Van Rompaey, Koen Boussery
Software Mentions: 1
Published: about 8 years ago

10.1098/rsta.2013.0040

The ocean's role in polar climate change: asymmetric Arctic and Antarctic responses to greenhouse gas and ozone forcing
Cited by: 110
Author(s): John Marshall, Kyle C. Armour, J.W. Scott, Yavor Kostov, Ute Hausmann, David Ferreira, Theodore G. Shepherd, Cecilia M. Bitz
Software Mentions: 1
Published: about 12 years ago

10.1098/rsta.2018.0148

Assessing the scales in numerical weather and climate predictions: will exascale be the rescue?
Cited by: 49
Author(s): Philipp Neumann, Peter Dueben, Panagiotis Adamidis, Péter Bauer, Matthias Brück, Luis Kornblueh, Daniel Klocke, Björn Stevens, Nils Wedi, Joachim Biercamp
Software Mentions: 1
Published: over 7 years ago

10.14814/phy2.13726

Physiological culture conditions alter myotube morphology and responses to atrophy treatments: implications for in vitro research on muscle wasting
Cited by: 7
Author(s): Élodie Archer-Lahlou, Cathy Lan, R. Thomas Jagoe
Software Mentions: 1
Published: over 8 years ago

10.1002/PHY2.8

Elevated pulmonary arterial pressure and altered expression ofDdah1andArg1in mice lacking cavin-1/PTRF
Cited by: 30
Author(s): Karl Swärd, Mardjaneh Karbalaei Sadegh, Masataka Mori, Jonas Erjefält, Catarina Rippe
Software Mentions: 1
Published: over 13 years ago

10.1186/s40814-021-00883-3

Posttraumatic stress disorder intervention for people with severe mental illness in a low-income country primary care setting: a randomized feasibility trial protocol
Cited by: 1
Author(s): Lauren C. Ng, Eyerusalem Getachew Serba, Benyam Worku Dubale, Abebaw Fekadu, Charlotte Hanlon
Software Mentions: 1
Published: about 5 years ago

10.1111/pbi.13002

Time-specific and pleiotropic quantitative trait loci coordinately modulate stem growth inPopulus
Cited by: 30
Author(s): Qingzhang Du, Xiaohui Yang, Jianbo Xie, Mingyang Quan, Xiao Liang, Wenjie Lu, Jiaxing Tian, Chenrui Gong, Jinhui Chen, Bai-Lian Li, Deqiang Zhang
Software Mentions: 1
Published: about 8 years ago

10.1111/pbi.13030

Resequencing of cv CRI‐12 family reveals haplotype block inheritance and recombination of agronomically important genes in artificial selection
Cited by: 18
Author(s): Xuke Lu, Xiaoqiong Fu, Delong Wang, Junyi Wang, Xiugui Chen, Meirong Hao, Junjuan Wang, Kyle A. Gervers, Lixue Guo, Shuai Wang, Zujun Yin, Weili Fan, Chunwei Shi, Xiaoge Wang, Jun Peng, Chao Chen, Ruifeng Cui, Na Shu, Binglei Zhang, Mingge Han, Xin Zhao, Mingchun Mu, John Z. Yu, Wuwei Ye
Software Mentions: 1
Published: almost 8 years ago

10.1111/pbi.12826

Assembly and analysis of aqingkereference genome demonstrate its close genetic relation to modern cultivated barley
Cited by: 48
Author(s): Fei Dai, Xiaolei Wang, Xiaoqi Zhang, Zhonghua Chen, Eviatar Nevo, Gulei Jin, Dezhi Wu, Chengdao Li, Guoping Zhang
Software Mentions: 1
Published: almost 9 years ago

10.1111/pbi.12704

A novel functional gene associated with cold tolerance at the seedling stage in rice
Cited by: 56
Author(s): Junliang Zhao, Shaohong Zhang, Jingfang Dong, Ting Yang, Xingxue Mao, Qing Liu, Xiaofei Wang, Bin Liu
Software Mentions: 1
Published: over 9 years ago

10.1111/pbi.13203

A high‐throughput BAC end analysis protocol ( <scp>BAC</scp> ‐anchor) for profiling genome assembly and physical mapping
Cited by: 4
Author(s): Xiaohui Yang, Yan Yu, Jian Ling, Jiantao Guan, Xuewu Guo, Dan Dong, Liping Jin, Sanwen Huang, Jun Li, Guangcun Li
Software Mentions: 1
Published: about 7 years ago

10.1111/pbi.13138

Strong gene activation in plants with genome‐wide specificity using a new orthogonal <scp>CRISPR</scp>/Cas9‐based programmable transcriptional activator
Cited by: 70
Author(s): Sara Selma, Joan Miquel Bernabé‐Orts, Marta Vázquez‐Vilar, Borja Diego-Martin, María Ajenjo, Victor García‐Carpintero, Antonio Granell, Diego Orzáez
Software Mentions: 1
Published: over 7 years ago

10.1111/pbi.13420

Genomic prediction of maize microphenotypes provides insights for optimizing selection and mining diversity
Cited by: 15
Author(s): Xiaoqing Yu, Samuel Leiboff, Xianran Li, Tingting Guo, Natalie Ronning, Xiaoyu Zhang, Gary J. Muehlbauer, Marja C.P. Timmermans, Patrick S. Schnable, Michael J. Scanlon, Jianming Yu
Software Mentions: 1
Published: over 6 years ago

10.1002/pld3.317

Quantification of gray mold infection in lettuce using a bispectral imaging system under laboratory conditions
Cited by: 1
Author(s): Clifton G. Scarboro, Stephanie M. Ruzsa, Colleen J. Doherty, Michael W. Kudenov
Software Mentions: 1
Published: over 5 years ago

10.1002/pld3.306

A cellular expression map of epidermal and subepidermal cell layer‐enriched transcription factor genes integrated with the regulatory network in Arabidopsis shoot apical meristem
Cited by: 2
Author(s): Shivani Bhatia, Harish Kumar, Monika Mahajan, Manisha Yadav, Prince Saini, Shalini Yadav, Shivani Sahu, Jayesh Kumar Sundaram, Ram Kishor Yadav
Software Mentions: 1
Published: over 5 years ago

10.1186/s13007-017-0198-y

Improved classification accuracy of powdery mildew infection levels of wine grapes by spatial-spectral analysis of hyperspectral images
Cited by: 63
Author(s): Uwe Knauer, Andrea Matros, Tijana Petrović, T Zanker, Eileen S. Scott, Udo Seiffert
Software Mentions: 1
Published: over 9 years ago

10.1186/s13007-019-0521-x

Sensory assessment of Cercospora beticola sporulation for phenotyping the partial disease resistance of sugar beet genotypes
Cited by: 13
Author(s): E. C. Oerke, Marlene Leucker, Ulrike Steiner
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13007-021-00719-4

Heritable gene editing using FT mobile guide RNAs and DNA viruses
Cited by: 26
Author(s): Jianfeng Lei, Peng Dai, Yue Li, Wanqi Zhang, Guantong Zhou, Chao Liu, Xiaodong Liu
Software Mentions: 1
Published: over 5 years ago

10.1186/1746-4811-8-3

Hyperspectral imaging for small-scale analysis of symptoms caused by different sugar beet diseases
Cited by: 257
Author(s): Anne-Katrin Mahlein, Ulrike Steiner, Christian Hillnhütter, H. W. Dehne, E. C. Oerke
Software Mentions: 1
Published: over 14 years ago

10.34133/2021/9765952

Classification of Rice Yield Using UAV-Based Hyperspectral Imagery and Lodging Feature
Cited by: 15
Author(s): Jian Wang, Bizhi Wu, Markus V. Kohnen, Daqi Lin, Changcai Yang, Xiaowei Wang, Ailing Qiang, Wei Liu, Jian Kang, Hua Li, Jing Shen, Tianhao Yao, Jun Su, Bangyu Li, Lianfeng Gu
Software Mentions: 1
Published: over 5 years ago

10.3390/plants10040771

Mapping of Genetic Locus for Leaf Trichome Formation in Chinese Cabbage Based on Bulked Segregant Analysis
Cited by: 6
Author(s): Rujia Zhang, Yiming Ren, Huiyuan Wu, Yang Yu, Mengguo Yuan, Haonan Liang, Changwei Zhang
Software Mentions: 1
Published: over 5 years ago

Projects: cran: SAM

Science Score: 85/100

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Papers Mentioning SAM 4,566