cran: RDP | Projects | Ecosyste.ms: Papers

10.1128/MRA.00329-19

Isolation, Whole-Genome Sequencing, and Annotation of Yimella sp. RIT 621, a Strain That Produces Antibiotic Compounds against Escherichia coli ATCC 25922 and Bacillus subtilis BGSC 168
Cited by: 1
Author(s): Anutthaman Parthasarathy, Narayan H. Wong, Nicolas D. Burns, Atlantis H. Aziz-Dickerson, Joyceline Dweh, D’Asia Buchanan, Michael A. Savka, André O. Hudson
Software Mentions: 1
Published: over 5 years ago

10.1186/2049-2618-2-41

Shaping the oral microbiota through intimate kissing
Cited by: 140
Author(s): Remco Kort, Martien P. M. Caspers, Astrid van de Graaf, Wim van Egmond, Bart J. F. Keijser, Guus Roeselers
Software Mentions: 1
Published: about 10 years ago

10.3390/microorganisms8111664

The Bacterial Microbiome in the Small Intestine of Hooded Seals (Cystophora cristata)
Cited by: 5
Author(s): Mario Acquarone, Alejandro Salgado-Flores, Monica A. Sundset
Software Mentions: 1
Published: about 4 years ago

10.3390/microorganisms9030619

Diversity of Bacterioplankton and Bacteriobenthos from the Veracruz Reef System, Southwestern Gulf of Mexico
Cited by: 1
Author(s): Citlali Rodríguez-Gómez, Lorena M. Durán-Riveroll, Yuri B. Okolodkov, Rosa María Oliart-Ros, Andrea M. García-Casillas, Allan Cembella
Software Mentions: 1
Published: over 3 years ago

10.3390/microorganisms8081202

Microbial Communities in Permafrost Soils of Larsemann Hills, Eastern Antarctica: Environmental Controls and Effect of Human Impact
Cited by: 13
Author(s): Ivan Alekseev, Aleksei Zverev, Evgeny Abakumov
Software Mentions: 1
Published: over 4 years ago

10.1186/s13100-018-0117-4

Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction
Cited by: 10
Author(s): Akash Sookdeo, Crystal M. Hepp, Stéphane Boissinot
Software Mentions: 1
Published: over 6 years ago

10.1111/1755-0998.12994

<i>LDJump</i>: Estimating variable recombination rates from population genetic data
Cited by: 20
Author(s): Philipp Hermann, Angelika Heissl, Irene Tiemann‐Boege, Andreas Futschik
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules23071555

Isolation of β-1,3-Glucanase-Producing Microorganisms from Poria cocos Cultivation Soil via Molecular Biology
Cited by: 27
Author(s): Qiulan Wu, Xiaoguang Dou, Qi Wang, Guan Zhang, Yujie Cai, Xiangru Liao
Software Mentions: 1
Published: over 6 years ago

10.3897/mycokeys.50.32432

Solving the taxonomic identity of Pseudotomentella tristis s.l. (Thelephorales, Basidiomycota) – a multi-gene phylogeny and taxonomic review, integrating ecological and geographical data
Cited by: 4
Author(s): Sten Svantesson, Karl‐Henrik Larsson, Urmas Kõljalg, Tom W. May, Patrik Cangren, R. Henrik Nilsson, Ellen Larsson
Software Mentions: 1
Published: over 5 years ago

10.1002/vms3.288

Genomic analysis of porcine circovirus type 2 from southern China
Cited by: 10
Author(s): Qizhuang Lv, Tao Wang, Jiahua Deng, Yan Chen, Yan Qiu, Daobo Wang, Yong‐Guan Zhu
Software Mentions: 1
Published: over 4 years ago

10.1080/01652176.2021.1967511

Detection and molecular characterization of two canine circovirus genotypes co-circulating in Vietnam
Cited by: 10
Author(s): Nguyen Manh Tuong, Chutchai Piewbang, Anudep Rungsipipat, Somporn Techangamsuwan
Software Mentions: 1
Published: almost 4 years ago

10.1186/s13567-014-0098-3

Diversity of avipoxviruses in captive-bred Houbara bustard
Cited by: 12
Author(s): Guillaume Le Loc’h, Mariette Ducatez, Christelle Camus-Bouclainville, Jean‐Luc Guérin, Stéphane Bertagnoli
Software Mentions: 1
Published: about 10 years ago

10.1186/s13567-018-0532-z

Genomic and biologic comparisons of cyprinid herpesvirus 3 strains
Cited by: 25
Author(s): Yuan Gao, Nicolás M. Suárez, Gavin S. Wilkie, Chuanfu Dong, Sven Bergmann, Pei-Yu Lee, Andrew J. Davison, Alain Vanderplasschen, Maxime Boutier
Software Mentions: 1
Published: over 6 years ago

10.1186/s13567-021-00954-6

The spike glycoprotein genes of porcine epidemic diarrhea viruses isolated in China
Cited by: 7
Author(s): Peihua Wang, Yaqian Li, Yuanqing Pan, Yanyan Guo, Fan Guo, Rui-Zhu Shi, Li Xing
Software Mentions: 1
Published: over 3 years ago

10.3390/vetsci8060113

Comparison of the Fecal Microbiota of Horses with Intestinal Disease and Their Healthy Counterparts
Cited by: 10
Author(s): Taemook Park, Hyeonsook Cheong, Jungho Yoon, Ah-Ram Kim, Young‐Min Yun, Tatsuya Unno
Software Mentions: 1
Published: over 3 years ago

10.1186/1743-422X-4-40

Genome-wide diversity and selective pressure in the human rhinovirus
Cited by: 82
Author(s): Amy Kistler, Dale R. Webster, Silvi Rouskin, Vincent Magrini, Joel J. Credle, David P. Schnurr, Homer A. Boushey, Elaine R. Mardis, Hao Li, Joseph L. DeRisi
Software Mentions: 1
Published: almost 18 years ago

10.1186/1743-422X-4-111

Detection and frequency of recombination in tomato-infecting begomoviruses of South and Southeast Asia
Cited by: 47
Author(s): H. C. Prasanna, Mathura Rai
Software Mentions: 1
Published: almost 18 years ago

10.1186/1743-422X-5-9

Genetic variation and recombination of RdRp and HSP 70h genes of Citrus tristeza virus isolates from orange trees showing symptoms of citrus sudden death disease
Cited by: 9
Author(s): Clarissa P.C. Gomes, Tatsuya Nagata, Waldir Cintra de Jesús, Carlos R. Borges Neto, Γεώργιος Παππάς, Darren P. Martin
Software Mentions: 1
Published: almost 17 years ago

10.1186/1743-422X-5-72

Complete genome of a European hepatitis C virus subtype 1g isolate: phylogenetic and genetic analyses
Cited by: 18
Author(s): María Alma Bracho, Verónica Saludes, Elisa Martró, Ana Bargalló, Fernando González‐Candelas, V. Ausina
Software Mentions: 1
Published: almost 17 years ago

10.1186/1743-422X-5-65

Homologous recombination is unlikely to play a major role in influenza B virus evolution
Cited by: 7
Author(s): Guan-Zhu Han, Xiping Liu, Sishen Li
Software Mentions: 1
Published: almost 17 years ago

10.1186/1743-422X-5-143

Recombination analysis of Soybean mosaic virus sequences reveals evidence of RNA recombination between distinct pathotypes
Cited by: 38
Author(s): Alla Gagarinova, Mohan Babu, Martina V. Strömvik, Aiming Wang
Software Mentions: 1
Published: almost 16 years ago

10.1186/1743-422X-6-36

A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family
Cited by: 72
Author(s): Arvind Varsani, Dionne N. Shepherd, Kyle Dent, Adérito Luis Monjane, Edward P. Rybicki
Software Mentions: 1
Published: over 15 years ago

10.1186/1743-422X-6-48

Presence of necrotic strains of Potato virus Y in Mexican potatoes
Cited by: 13
Author(s): Victoriano Roberto Ramírez-Rodríguez, Katia Aviña-Padilla, Gustavo Frías-Treviño, Laura Silva-Rosales
Software Mentions: 1
Published: over 15 years ago

10.1186/1743-422X-6-165

Recombination in West Nile Virus: minimal contribution to genomic diversity
Cited by: 31
Author(s): Brett E. Pickett, Elliot J. Lefkowitz
Software Mentions: 1
Published: about 15 years ago

10.1186/1743-422X-7-48

Molecular diversity of Cotton leaf curl Gezira virus isolates and their satellite DNAs associated with okra leaf curl disease in Burkina Faso
Cited by: 42
Author(s): Fidèle Tiendrébéogo, Pierre Lefeuvre, Murielle Hoareau, Julie Villemot, G. Konaté, Alfred S. Traoré, Nicolas Barro, Valentin Stanislas Edgar Traoré, Bernard Reynaud, Oumar Traoré, Jean‐Michel Lett
Software Mentions: 1
Published: over 14 years ago

10.1186/1743-422X-7-227

No observed effect of homologous recombination on influenza C virus evolution
Cited by: 9
Author(s): Guan-Zhu Han, Maciej F. Boni, Si Shen Li
Software Mentions: 1
Published: about 14 years ago

10.1186/1743-422X-7-275

Analysis of a new strain of Euphorbia mosaic virus with distinct replication specificity unveils a lineage of begomoviruses with short Rep sequences in the DNA-B intergenic region
Cited by: 25
Author(s): Josefat Gregorio-Jorge, Artemiza Bernal-Alcocer, Bernardo Bañuelos-Hernández, Ángel G. Alpuche-Solís, Cecilia Hernández‐Zepeda, Oscar A. Moreno‐Valenzuela, Gustavo Frías-Treviño, Gerardo R. Argüello‐Astorga
Software Mentions: 1
Published: about 14 years ago

10.1186/1743-422X-8-58

Identification of a natural human serotype 3 parainfluenza virus
Cited by: 20
Author(s): Huiting Yang, Qing Jiang, Xu Zhou, Muqun Bai, Hongli Si, Xiaojing Wang, Yan Lu, Heng Zhao, Hongbin He, Cheng-Qiang He
Software Mentions: 1
Published: almost 14 years ago

10.1186/1743-422X-8-175

Isolation, identification and complete genome sequence analysis of a strain of foot-and-mouth disease virus serotype Asia1 from pigs in southwest of China
Cited by: 12
Author(s): Xin Yang, Yingshun Zhou, Hongning Wang, Yi Zhang, Kun Wei, Ting Wang
Software Mentions: 1
Published: over 13 years ago

10.1186/1743-422X-8-373

Molecular evolution of Azagny virus, a newfound hantavirus harbored by the West African pygmy shrew (Crocidura obscurior) in Côte d'Ivoire
Cited by: 61
Author(s): Hae Ji Kang, Blaise Kadjo, Sylvain Dubey, François Jacquet, Richard Yanagihara
Software Mentions: 1
Published: over 13 years ago

10.1186/1743-422X-8-439

Analysis of the genomic homologous recombination in Theilovirus based on complete genomes
Cited by: 5
Author(s): Guangming Sun, Xiaodan Zhang, Maoli Yi, Shihe Shao, Wen Zhang
Software Mentions: 1
Published: about 13 years ago

10.1186/1743-422X-9-67

Evolution of African cassava mosaic virus by recombination between bipartite and monopartite begomoviruses
Cited by: 50
Author(s): Fidèle Tiendrébéogo, Pierre Lefeuvre, Murielle Hoareau, Mireille Aurélie Harimalala, Alexandre De Bruyn, Julie Villemot, Valentin Stanislas Edgar Traoré, G. Konaté, Alfred S. Traoré, Nicolas Barro, Bernard Reynaud, Oumar Traoré, Jean‐Michel Lett
Software Mentions: 1
Published: over 12 years ago

10.1186/1743-422X-9-241

Genetic diversity and recombination analysis of sweepoviruses from Brazil
Cited by: 39
Author(s): Leonardo Cunha de Albuquerque, Alice K. Inoue‐Nagata, Bruna Teles Pinheiro, Renato O. Resende, Enrique Moriones, Jesús Navas‐Castillo
Software Mentions: 1
Published: about 12 years ago

10.1186/1743-422X-10-32

Analysis of whole genome sequences of 16 strains of rubella virus from the United States, 1961–2009
Cited by: 29
Author(s): Emily Abernathy, Min-hsin Chen, Jayati Bera, Susmita Shrivastava, Ewen F. Kirkness, Qi Zheng, William J. Bellini, Joseph P. Icenogle
Software Mentions: 1
Published: almost 12 years ago

10.1186/1743-422X-10-170

Genetic diversity of Newcastle disease virus in Pakistan: a countrywide perspective
Cited by: 44
Author(s): Muhammad Zubair Shabbir, Siamak Zohari, Tahir Yaqub, Jawad Nazir, Muhammad Abu Bakr Shabbir, Nadia Mukhtar, Muhammad Shafee, Muhammad Sajid, Muhammad Anees, Muhammad Abbas, Muhammad Tanveer Khan, Asad Ali, Aamir Ghafoor, Abdul Ahad, Aijaz Ali Channa, Aftab Ahmad Anjum, Nazeer Hussain, Arfan Ahmad, Mohsan Ullah Goraya, Zahid Iqbal, Sohail A. Khan, Hassan Bin Aslam, Kiran Zehra, Muhammad Sohail, Waseem Yaqub, Nisar Ahmad, Mikael Berg, Muhammad Munir
Software Mentions: 1
Published: over 11 years ago

10.1186/1743-422X-10-330

Molecular epidemiology of Newcastle disease virus isolates from vaccinated commercial poultry farms in non-epidemic areas of Japan
Cited by: 29
Author(s): Dennis V. Umali, Hiroshi Ito, Terumasa Suzuki, Kinya Shirota, Hiromitsu Katoh, Toshihiro Ito
Software Mentions: 1
Published: about 11 years ago

10.1186/1743-422X-11-168

Novel norovirus recombinants detected in South Africa
Cited by: 52
Author(s): Janet Mans, Tanya Y. Murray, Maureen B. Taylor
Software Mentions: 1
Published: about 10 years ago

10.1186/1743-422X-11-181

Frequent migration of introduced cucurbit-infecting begomoviruses among Middle Eastern countries
Cited by: 23
Author(s): Moshe Lapidot, Dana Gelbart, Amit Gal‐On, Noa Sela, Ghandi Anfoka, Fatima Haj Ahmed, Yusuf Abou-Jawada, H. Sobh, H. M. Mazyad, Aboul Ata E. Aboul-Ata, Ahmed Kamal El-Attar, Mohammed S. Ali‐Shtayeh, Rana M. Jamous, Jane E. Polston, Siobain Duffy
Software Mentions: 1
Published: about 10 years ago

10.1186/s12985-015-0361-x

Revisiting the taxonomical classification of Porcine Circovirus type 2 (PCV2): still a real challenge
Cited by: 66
Author(s): Giovanni Franzo, Martı́ Cortey, Àlex Olvera, Dinko Novosel, Alessandra Marnie Martins Gomes de Castro, Philippe Biagini, Joaquím Segalés, Michele Drigo
Software Mentions: 1
Published: about 9 years ago

10.1186/s12985-015-0457-3

Identification of three new isolates of Tomato spotted wilt virus from different hosts in China: molecular diversity, phylogenetic and recombination analyses
Cited by: 18
Author(s): Zhenjia Zhang, Deya Wang, Yu Chang, Zenghui Wang, Jiahong Dong, Kaichuang Shi, Xuefeng Yuan
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12985-016-0487-5

Molecular characterisation of a novel recombinant Ribgrass mosaic virus strain FSHS
Cited by: 9
Author(s): Ramesh R. Chavan, M. N. Pearson
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12985-016-0497-3

Characterization and analysis of an infectious bronchitis virus strain isolated from southern China in 2013
Cited by: 32
Author(s): Gang Xu, Xiao Yu Liu, Ye Zhao, Chen Yang, Jing Zhao, Guo Zhong Zhang
Software Mentions: 1
Published: over 8 years ago

10.1186/s12985-016-0609-0

Continuous detection and genetic diversity of human rotavirus A in sewage in eastern China, 2013–2014
Cited by: 23
Author(s): Nan Zhou, Dongwen Lv, Suting Wang, Xiaojuan Lin, Zhuanfang Bi, Haiyan Wang, Pei Wang, Huaning Zhang, Zexin Tao, Peibin Hou, Yue Song, Aiqiang Xu
Software Mentions: 1
Published: about 8 years ago

10.1186/s12985-017-0735-3

Emergence of mosaic recombinant strains potentially associated with vaccine JXA1-R and predominant circulating strains of porcine reproductive and respiratory syndrome virus in different provinces of China
Cited by: 52
Author(s): Huajian Zhao, Qing Han, Lei Zhang, Zhiyong Zhang, Yufeng Wu, Hong Shen, Ping Jiang
Software Mentions: 1
Published: over 7 years ago

10.1186/s12985-017-0790-9

Variability in P1 gene redefines phylogenetic relationships among cassava brown streak viruses
Cited by: 11
Author(s): Willard Mbewe, Fred Tairo, Peter Sseruwagi, Joseph Ndunguru, Siobain Duffy, Settumba B. Mukasa, I. R. M. Benesi, Samar Sheat, Marianne Koerbler, Stephan Winter
Software Mentions: 1
Published: over 7 years ago

10.1186/s12985-017-0832-3

The genetic structure of Turnip mosaic virus population reveals the rapid expansion of a new emergent lineage in China
Cited by: 9
Author(s): Xiangdong Li, Tiansheng Zhu, Xiao Yin, Chengling Zhang, Jia Chen, Yanping Tian, Jinliang Liu
Software Mentions: 1
Published: about 7 years ago

10.1186/s12985-017-0850-1

Genetic analysis of porcine circovirus type 2 from pigs affected with PMWS in Chile reveals intergenotypic recombination
Cited by: 11
Author(s): Víctor Neira, Natália Ramos, Rodrigo Tapia, Juan Arbiza, Andrónico Neira‐Carrillo, M. Quezada, A Ruiz, Sergio A. Bucarey
Software Mentions: 1
Published: about 7 years ago

10.1186/s12985-017-0910-6

The prevalent status and genetic diversity of porcine reproductive and respiratory syndrome virus in China: a molecular epidemiological perspective
Cited by: 129
Author(s): Zhenhua Guo, Xinxin Chen, Rui Li, Songlin Qiao, Gaiping Zhang
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12985-018-0998-3

Characterization of a new apple luteovirus identified by high-throughput sequencing
Cited by: 17
Author(s): Huawei Liu, Liping Wu, Е. А. Николаева, Kari A. Peter, Zongrang Liu, Dimitre Mollov, Mengji Cao, Ruhui Li
Software Mentions: 1
Published: over 6 years ago

10.1186/s12985-018-1043-2

Full-length genome and molecular characterization of dengue virus serotype 2 isolated from an imported patient from Myanmar
Cited by: 7
Author(s): Zong Yuan Zeng, Jiandong Shi, Xin Guo, Ling Mo, Ningzhu Hu, Jing Sun, Man‐Li C. Wu, Hongning Zhou, Yunzhang Hu
Software Mentions: 1
Published: over 6 years ago

10.1186/s12985-019-1129-5

Full genome sequence analysis and putative host-shifting of Milk vetch dwarf virus infecting tobacco (Nicotiana tabacum) in China
Cited by: 4
Author(s): Kamran Ali, Han Wei Hou, Yi Xie, Cunxiao Zhao, Xiaomin Wei, Chaoqun Zhang, Xiao Yu, Fenglong Wang, Jinguang Yang
Software Mentions: 1
Published: over 5 years ago

10.1186/s12985-019-1163-3

Close evolutionary relationship between rice black-streaked dwarf virus and southern rice black-streaked dwarf virus based on analysis of their bicistronic RNAs
Cited by: 2
Author(s): Zenghui Wang, Yu Chang, Yuanhao Peng, Chengshi Ding, Qingliang Li, Deya Wang, Xuefeng Yuan
Software Mentions: 1
Published: over 5 years ago

10.1186/s12985-020-01321-1

Analysis of reassortant and intragenic recombination in Cypovirus
Cited by: 3
Author(s): Zhendong Zhang, Ning Li, Chengxiang Hou, Kun Gao, Xudong Tang, Xijie Guo
Software Mentions: 1
Published: over 4 years ago

10.1186/s12985-020-01387-x

Whole genomic analysis of a potential recombinant human adenovirus type 1 in Qinghai plateau, China
Cited by: 7
Author(s): Juan Yu, Shouqin Zhao, Huaxiang Rao
Software Mentions: 1
Published: over 4 years ago

10.1186/s12985-021-01511-5

Pod pepper vein yellows virus, a new recombinant polerovirus infecting Capsicum frutescens in Yunnan province, China
Cited by: 9
Author(s): Kuangjie Zhao, Yueyan Yin, Mengying Hua, Shaoxiang Wang, Xiaohan Mo, Enping Yuan, Hongying Zheng, Lin Lin, Hairu Chen, Yuwen Lu, Jianping Chen, Jiejun Peng, Fei Yan
Software Mentions: 1
Published: over 3 years ago

10.1093/ve/vez032

Modular nature of simian foamy virus genomes and their evolutionary history
Cited by: 11
Author(s): Pakorn Aiewsakun, Léa Richard, Antoine Gessain, Augustin Mouinga‐Ondémé, Philippe V. Afonso, Aris Katzourakis
Software Mentions: 1
Published: over 5 years ago

10.1093/ve/vez043

RETRACTED: A complex evolutionary relationship between HHV-6A and HHV-6B
Cited by: 1
Author(s): Diego Forni, Rachele Cagliani, Mario Clerici, Manuela Sironi
Software Mentions: 1
Published: over 5 years ago

10.1093/ve/vez057

Avian and serpentine endogenous foamy viruses, and new insights into the macroevolutionary history of foamy viruses
Cited by: 6
Author(s): Pakorn Aiewsakun
Software Mentions: 1
Published: almost 5 years ago

10.1093/ve/veaa035

Evolutionary analysis of exogenous and integrated HHV-6A/HHV-6B populations
Cited by: 1
Author(s): Diego Forni, Rachele Cagliani, Mario Clerici, Manuela Sironi
Software Mentions: 1
Published: almost 5 years ago

10.1093/ve/veaa064

Novel hepaci- and pegi-like viruses in native Australian wildlife and non-human primates
Cited by: 18
Author(s): Ashleigh F. Porter, John H.‐O. Pettersson, Wei-Shan Chang, Erin Harvey, Karrie Rose, Mǎng Shī, John‐Sebastian Eden, Jan P. Buchmann, Craig Moritz, Edward C. Holmes
Software Mentions: 1
Published: over 4 years ago

10.1093/ve/veaa098

Synonymous mutations and the molecular evolution of SARS-CoV-2 origins
Cited by: 48
Author(s): Hongru Wang, Lenore Pipes, Rasmus Nielsen
Software Mentions: 1
Published: almost 4 years ago

10.1093/ve/veaa087

RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets
Cited by: 201
Author(s): Darren P. Martin, Arvind Varsani, Philippe Roumagnac, Gerrit Botha, Suresh Maslamoney, Tiana Schwab, Zena Kelz, Venkatesh Kumar, Ben Murrell
Software Mentions: 1
Published: over 4 years ago

10.1093/ve/veab075

Diversity and transmission of Aleutian mink disease virus in feral and farmed American mink and native mustelids
Cited by: 7
Author(s): Jenni Virtanen, Andrzej Zalewski, Marta Kołodziej‐Sobocińska, Marcin Brzeziński, Teemu Smura, Tarja Sironen
Software Mentions: 1
Published: about 3 years ago

10.1007/s11262-016-1343-9

Complete genome sequence of a sapovirus from a child in Zhejiang, China
Cited by: 1
Author(s): Xiaohong Zhou, Yi Sun, Shang Xiao-chun, Jian Gao, Xueqin Zhao, Huiqun Shuai, Rui Zhang, Yanjun Zhang
Software Mentions: 1
Published: over 8 years ago

10.1016/j.virusres.2020.197944

Characterization of distinct strains of an aphid-transmitted ilarvirus (Fam. Bromoviridae) infecting different hosts from South America
Cited by: 5
Author(s): Rocio Silvestre, Segundo Fuentes, Roger Risco, A Berrocal, Ian Adams, Adrian Fox, Wilmer J. Cuellar, Jan Kreuze
Software Mentions: 1
Published: over 4 years ago

10.3390/v3091777

Recombination in Avian Gamma-Coronavirus Infectious Bronchitis Virus
Cited by: 84
Author(s): Sharmi Thor, Deborah A. Hilt, Jessica C. Kissinger, Andrew H. Paterson, Mark W. Jackwood
Software Mentions: 1
Published: about 13 years ago

10.3390/v4112670

Comparative Genomics of Korean Infectious Bronchitis Viruses (IBVs) and an Animal Model to Evaluate Pathogenicity of IBVs to the Reproductive Organs
Cited by: 22
Author(s): Seung-Min Hong, Hyuk‐Joon Kwon, Il-Hwan Kim, Meilan Mo, Jae-Hong Kim
Software Mentions: 1
Published: about 12 years ago

10.3390/v5020550

Genetic Diversity of Spike, 3a, 3b and E Genes of Infectious Bronchitis Viruses and Emergence of New Recombinants in Korea
Cited by: 19
Author(s): Mei Lan Mo, Sung Min Hong, Hanjung Kwon, Il Hwan Kim, Chang Seon Song, Jae Hong Kim
Software Mentions: 1
Published: almost 12 years ago

10.3390/v5092116

A Naturally Occurring Defective DNA Satellite Associated with a Monopartite Begomovirus: Evidence for Recombination between Alphasatellite and Betasatellite
Cited by: 18
Author(s): Changjun Huang, Yan Xie, Lihua Zhao, He Ren, Zhenghe Li
Software Mentions: 1
Published: about 11 years ago

10.3390/v5123007

Molecular Characterization of Major Structural Protein Genes of Avian Coronavirus Infectious Bronchitis Virus Isolates in Southern China
Cited by: 36
Author(s): Mei Lan Mo, Meng Li, Bai Cheng Huang, Wen Sheng Fan, Ping Wei, Tian Chao Wei, Qiu Ying Cheng, Wei Zheng, Ya Hui Lang
Software Mentions: 1
Published: almost 11 years ago

10.3390/v6052186

Regional Changes in the Sequence of Cotton Leaf Curl Multan Betasatellite
Cited by: 16
Author(s): Sohail Akhtar, Muhammad Nouman Tahir, Ghulam Rasool Baloch, Shaista Javaid, Ali Qaiser Khan, Imran Amin, R. W. Briddon, Shahid Mansoor
Software Mentions: 1
Published: over 10 years ago

10.3390/v7010239

Identification of a Novel Human Rhinovirus C Type by Antibody Capture VIDISCA-454
Cited by: 2
Author(s): Seyed Mohammad Jazaeri Farsani, Bas B. Oude Munnink, Marta Canuti, Martin Deijs, Matthew Cotten, Maarten F. Jebbink, Joost T. P. Verhoeven, Paul Kellam, Katherine Loens, Herman Goossens, Margareta Ieven, Lia van der Hoek
Software Mentions: 1
Published: almost 10 years ago

10.3390/v7112908

Detection and Characterization of a Novel Reassortant Mammalian Orthoreovirus in Bats in Europe
Cited by: 31
Author(s): Davide Lelli, Ana Moreno, Andrej Steyer, Tina Nagliˇc, Chiara Chiapponi, Alice Prosperi, Francesca Faccin, Enrica Sozzi, Antonio Llombart‐Bosch
Software Mentions: 1
Published: about 9 years ago

10.3390/v8060164

Genomic Characterization of the Genus Nairovirus (Family Bunyaviridae)
Cited by: 49
Author(s): Jens H. Kuhn, Michael R. Wiley, Sergio E. Rodriguez, Yīmíng Bào, Karla Prieto, A.P.A. Travassos da Rosa, Hilda Guzmán, Nazir Savji, Jason T. Ladner, Robert B. Tesh, Jiro Wada, Peter B. Jahrling, Dennis A. Bente, Gustavo Palacios
Software Mentions: 1
Published: over 8 years ago

10.3390/v9070183

Variability of Emaravirus Species Associated with Sterility Mosaic Disease of Pigeonpea in India Provides Evidence of Segment Reassortment
Cited by: 28
Author(s): Basavaprabhu L. Patil, Meenakshi Dangwal, Ritesh Mishra
Software Mentions: 1
Published: over 7 years ago

10.3390/v9080196

Perspectives on the Evolution of Porcine Parvovirus
Cited by: 16
Author(s): Woo-Taek Oh, Ri-Yeon Kim, Van Giap Nguyen, Hee‐Chun Chung, Bong‐Kyun Park
Software Mentions: 1
Published: over 7 years ago

10.3390/v10040151

Identification of a Novel Recombinant Type 2 Porcine Reproductive and Respiratory Syndrome Virus in China
Cited by: 20
Author(s): Long Zhou, Ran Kang, Bingyan Xie, Yiming Tian, Xuan Wu, Xuebin Lv, Xin Yang, Hongning Wang
Software Mentions: 1
Published: over 6 years ago

10.3390/v10040193

Full-Genome Characterization and Genetic Evolution of West African Isolates of Bagaza Virus
Cited by: 3
Author(s): Martin Faye, Oumar Faye, Moussa Moïse Diagne, Gamou Fall, Manfred Weidmann, Mbacké Sembène, Amadou Alpha Sall
Software Mentions: 1
Published: over 6 years ago

10.3390/v10060328

Whole Genome Analysis of Two Novel Type 2 Porcine Reproductive and Respiratory Syndrome Viruses with Complex Genome Recombination between Lineage 8, 3, and 1 Strains Identified in Southwestern China
Cited by: 30
Author(s): Long Zhou, Ran Kang, Yi Zhang, Mengdie Ding, Bingyan Xie, Yiming Tian, Xuan Wu, Lei Zuo, Xin Yang, Hongning Wang
Software Mentions: 1
Published: over 6 years ago

10.3390/v10070385

High-Throughput Sequencing Reveals Further Diversity of Little Cherry Virus 1 with Implications for Diagnostics
Cited by: 17
Author(s): Asimina Katsiani, Varvara I. Maliogka, N. I. Katis, Laurence Svanella-Dumas, Antonio Olmos, Ana Belén Ruiz-García, Armelle Marais, Chantal Faure, Sébastien Theil, Leonidas Lotos, Thierry Candresse
Software Mentions: 1
Published: over 6 years ago

10.3390/v10080430

Molecular and Biological Characterisation of Turnip mosaic virus Isolates Infecting Poppy (Papaver somniferum and P. rhoeas) in Slovakia
Cited by: 8
Author(s): Miroslav Glasa, Katarína Šoltýs, Lukáš Predajňa, Nina Sihelská, Slavomíra Nováková, Z Šubr, Ján Kraic, Daniel Mihálik
Software Mentions: 1
Published: over 6 years ago

10.3390/v10100551

Genetic Characterization and Pathogenicity of a Novel Recombined Porcine Reproductive and Respiratory Syndrome Virus 2 among Nadc30-Like, Jxa1-Like, and Mlv-Like Strains
Cited by: 39
Author(s): Long Zhou, Ran Kang, Jifeng Yu, Bingyan Xie, Changying Chen, Xingyu Li, Jing Xie, Yonggang Ye, Xiao Lu, Jinling Zhang, Xin Yang, Hongning Wang
Software Mentions: 1
Published: about 6 years ago

10.3390/v10100520

Recombination Located over 2A-2B Junction Ribosome Frameshifting Region of Saffold Cardiovirus
Cited by: 9
Author(s): Antônio Charlys da Costa, Adriana Luchs, Flávio Augusto de Pádua Milagres, Shirley Vasconcelos Komninakis, Danielle Elise Gill, Márcia Cristina Alves Brito Sayão Lobato, Rafael Brustulin, Rogério Togisaki das Chagas, Maria de Fátima Neves dos Santos Abrão, Cássia Vitória de Deus Alves Soares, Xutao Deng, Éster Cerdeira Sabino, Eric Delwart, Élcio Leal
Software Mentions: 1
Published: about 6 years ago

10.3390/v11010057

Genetic Diversity and Phylodynamics of Avian Coronaviruses in Egyptian Wild Birds
Cited by: 12
Author(s): Mohammed A. Rohaim, Rania F. El Naggar, Ahmed M. Helal, Mahmoud Bayoumi, Mohamed El-Saied, Kawkab A. Ahmed, Muhammad Zubair Shabbir, Muhammad Munir
Software Mentions: 1
Published: almost 6 years ago

10.3390/v11040308

Molecular Characterization and Evolutionary Analyses of Carnivore Protoparvovirus 1 NS1 Gene
Cited by: 29
Author(s): Francesco Mira, Marta Canuti, Giuseppa Purpari, Vincenza Cannella, Leonardo Occhiogrosso, Giorgia Schirò, Gabriele Chiaramonte, Santino Barreca, Patrizia Pisano, Antonio Lastra, Nicola Decaro, Annalisa Guercio
Software Mentions: 1
Published: over 5 years ago

10.3390/v11040327

Tomato Twisted Leaf Virus: A Novel Indigenous New World Monopartite Begomovirus Infecting Tomato in Venezuela
Cited by: 16
Author(s): Gustavo Romay, Francis Geraud-Pouey, Dorys T. Chirinos, Mathieu Mahillon, Annika Gillis, Jacques Mahillon, Claude Bragard
Software Mentions: 1
Published: over 5 years ago

10.3390/v12030334

Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus
Cited by: 1
Author(s): Kehong Yuan, Dongdong Wang, Qingdong Luan, Ju Sun, Qianwen Gao, Zhiyao Jiang, Shouchun Wang, Yijun Han, Xueting Qu, Yueying Cui, Shimei Qiu, Youxia Di, Xiaoyi Wang, Shaofu Song, Peiheng Wang, Shilong Xia, Yongle Yu, Weiquan Liu, Ye Yin
Software Mentions: 1
Published: over 4 years ago

10.3390/v12040361

Genetic Adaptations, Biases, and Evolutionary Analysis of Canine Distemper Virus Asia-4 Lineage in a Fatal Outbreak of Wild-Caught Civets in Thailand
Cited by: 11
Author(s): Chutchai Piewbang, Jira Chansaenroj, Piyaporn Kongmakee, Wijit Banlunara, Yong Poovorawan, Somporn Techangamsuwan
Software Mentions: 1
Published: over 4 years ago

10.3390/v12040437

Population Structure of Lassa Mammarenavirus in West Africa
Cited by: 8
Author(s): Diego Forni, Manuela Sironi
Software Mentions: 1
Published: over 4 years ago

10.3390/v12040443

A Complex of Badnavirus Species Infecting Cacao Reveals Mixed Infections, Extensive Genomic Variability, and Interspecific Recombination
Cited by: 14
Author(s): Roberto Ramos-Sobrinho, Nomatter Chingandu, Osman A. Gutiérrez, Jean-Philippe Marelli, Judith K. Brown
Software Mentions: 1
Published: over 4 years ago

10.3390/v12080790

Molecular Characterization of Porcine Epidemic Diarrhea Virus and Its New Genetic Classification Based on the Nucleocapsid Gene
Cited by: 8
Author(s): Sung Jae Kim, Van Giap Nguyen, Thi My Le Huynh, Taesung Park, Bong Kyun Park
Software Mentions: 1
Published: over 4 years ago

10.3390/v12091029

Identification and Distribution of Novel Cressdnaviruses and Circular Molecules in Four Penguin Species in South Georgia and the Antarctic Peninsula
Cited by: 9
Author(s): Hila Levy, Rafaela S. Fontenele, Ciara Harding, Crystal Suazo, Simona Kraberger, Kara Schmidlin, Anni Djurhuus, Caitlin Black, Tom Hart, Adrian L. Smith, Arvind Varsani
Software Mentions: 1
Published: about 4 years ago

10.3390/v12101061

Genetic Diversity Analysis of Coxsackievirus A8 Circulating in China and Worldwide Reveals a Highly Divergent Genotype
Cited by: 3
Author(s): Yang Song, Dongyan Wang, Yong Zhang, Zhaoxia Han, Jingwei Xiao, Huanhuan Lu, Dongmei Yan, Tianjiao Ji, Qian Yang, Shuangli Zhu
Software Mentions: 1
Published: about 4 years ago

10.3390/v12111262

Whole Genome Sequence Analysis of Porcine Astroviruses Reveals Novel Genetically Diverse Strains Circulating in East African Smallholder Pig Farms
Cited by: 8
Author(s): Joshua O. Amimo, Eunice Machuka, Edward Okoth Abworo, Anastasia N. Vlasova, Roger Pellé
Software Mentions: 1
Published: about 4 years ago

10.3390/v12111301

Identification of Novel Astroviruses in the Gastrointestinal Tract of Domestic Cats
Cited by: 7
Author(s): Kate Van Brussel, Xiuwan Wang, Mǎng Shī, Maura Carrai, Jun Li, Vito Martella, Julia A. Beatty, Edward C. Holmes, Vanessa R. Barrs
Software Mentions: 1
Published: about 4 years ago

10.3390/v12121421

Phylogenomic Analysis of Global Isolates of Canid Alphaherpesvirus 1
Cited by: 4
Author(s): Andrew C. Lewin, Lyndon M. Coghill, Melanie A. Mironovich, Chin‐Chi Liu, Renee T. Carter, Eric C. Ledbetter
Software Mentions: 1
Published: almost 4 years ago

10.3390/v13010057

Origin and Spread of the Dengue Virus Type 1, Genotype V in Senegal, 2015–2019
Cited by: 22
Author(s): Idrissa Dieng, Marielton dos Passos Cunha, Moussa Moïse Diagne, Pape Mbacké Sembène, Paolo Marinho de Andrade Zanotto, Ousmane Faye, Amadou Alpha Sall
Software Mentions: 1
Published: almost 4 years ago

10.3390/v13020249

High Diversity of Human Non-Polio Enterovirus Serotypes Identified in Contaminated Water in Nigeria
Cited by: 10
Author(s): Manasi Majumdar, Dimitra Klapsa, Thomas Wilton, Erika Bujaki, Maria Dolores Fernandez-Garcia, Temitope Oluwasegun Cephas Faleye, A. O. Oyero, Moses Olubusuyi Adewumi, Kader Ndiaye, Johnson Adekunle Adeniji, Javier Martı́n
Software Mentions: 1
Published: almost 4 years ago

10.3390/v13030396

The Novel Genetic Background of Infectious Bursal Disease Virus Strains Emerging from the Action of Positive Selection
Cited by: 8
Author(s): Anna Pikuła, Anna Lisowska, Agnieszka Jasik, Lester J. Pérez
Software Mentions: 1
Published: over 3 years ago

10.3390/v13040535

Recombination Events Shape the Genomic Evolution of Infectious Bronchitis Virus in Europe
Cited by: 11
Author(s): Krisztina Bali, Ádám Bálint, Attila Farsang, Szilvia Marton, Blaise Nagy, Eszter Kaszab, Sándór Belák, Vilmos Palya, Krisztiàn Bányai
Software Mentions: 1
Published: over 3 years ago

Projects: cran: RDP

Papers Mentioning RDP 1,243