cran: RColorBrewer | Projects | Ecosyste.ms: Papers

10.1038/srep11534

Vy-PER: eliminating false positive detection of virus integration events in next generation sequencing data
Cited by: 35
Author(s): Michael Förster, Silke Szymczak, David Ellinghaus, Georg Hemmrich, Malte Rühlemann, Lars Kraemer, Sören Mucha, Lars Wienbrandt, Martin Stanulla, André Franke
Software Mentions: 3
Published: over 9 years ago

10.1038/srep42702

Aging and serum exomiR content in women-effects of estrogenic hormone replacement therapy
Cited by: 23
Author(s): Reeta Kangas, Timo Törmäkangas, Vidal Fey, Juha Pursiheimo, Ilkka Miinalainen, Markku Alén, Jaakko Kaprio, Sarianna Sipilä, Anna‐Marja Säämänen, Vuokko Kovanen, Eija K. Laakkonen
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-017-07862-w

E-Liquid Autofluorescence can be used as a Marker of Vaping Deposition and Third-Hand Vape Exposure
Cited by: 15
Author(s): Eric S. Davis, Maria F. Sassano, Henry P. Goodell, Robert Tarran
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-019-47757-6

The Genomic Landscape of Centromeres in Cancers
Cited by: 17
Author(s): Anjan K. Saha, Mohamad Mourad, Mark H. Kaplan, Ilana Chefetz, Sami N. Malek, Ronald J. Buckanovich, David M. Markovitz, Rafael Contreras-Galindo
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-49031-1

Novel computational model of gastrula morphogenesis to identify spatial discriminator genes by self-organizing map (SOM) clustering
Cited by: 10
Author(s): Takahide Mori, Haruka Takaoka, Junko Yamane, Cantas Alev, Wataru Fujibuchi
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-019-49421-5

Staphylococcal enterotoxins modulate the effector CD4+ T cell response by reshaping the gene expression profile in adults with atopic dermatitis
Cited by: 11
Author(s): Raquel Leão Orfali, Fábio Seiti Yamada Yoshikawa, Luanda Mara da Silva Oliveira, Newton Lindolfo Pereira, Jozely Francisca Mello Lima, Yasmim Álefe Leuzzi Ramos, Alberto José da Silva Duarte, Maria Notomi Sato, Valéria Aoki
Software Mentions: 3
Published: about 5 years ago

10.1128/mBio.01121-16

The Gut Microbiome of the Vector Lutzomyia longipalpis Is Essential for Survival of Leishmania infantum
Cited by: 95
Author(s): Patrick H. Kelly, Sarah M. Bahr, Tiago D. Serafim, Nadim J. Ajami, Joseph F. Petrosino, Claudio Meneses, John R. Kirby, Jesús G. Valenzuela, Shaden Kamhawi, Mary E. Wilson
Software Mentions: 3
Published: over 7 years ago

10.16910/jemr.12.3.4

Improving the pilot selection process by using eye-tracking tools
Cited by: 1
Author(s): Slaviša Vlačić, Aleksandar Knežević, Sanja Rođenkov, Saptarshi Mandal, Panagiotis A. Vitsas
Software Mentions: 3
Published: almost 5 years ago

10.7554/eLife.02407

Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons
Cited by: 464
Author(s): Iris Jonkers, Ho Young Kwak, John T. Lis
Software Mentions: 3
Published: over 10 years ago

10.7554/eLife.61073

Plasma proteomic biomarker signature of age predicts health and life span
Cited by: 63
Author(s): Toshiko Tanaka, Nathan Basisty, Giovanna Fantoni, Julián Candia, Ann Zenobia Moore, Angélique Biancotto, Birgit Schilling, Stefania Bandinelli, Luigi Ferrucci
Software Mentions: 3
Published: about 4 years ago

10.3390/ijms14048000

Proteins Involved in Distinct Phases of Cold Hardening Process in Frost Resistant Winter Barley (Hordeum vulgare L.) cv Luxor
Cited by: 41
Author(s): Iva Hlaváčková, Pavel Vítámvás, Jiří Šantrůček, Klára Kosová, Sylva Zelenková, Ilja Tom Prášil, Jaroslava Ovesná, Radovan Hynek, Milan Kodı́ček
Software Mentions: 3
Published: over 11 years ago

10.3390/ijms22158028

Ligand-Dependent and Ligand-Independent Effects of Ephrin-B2–EphB4 Signaling in Melanoma Metastatic Spine Disease
Cited by: 2
Author(s): Andras Piffko, Thomas Broggini, Christoph Harms, Ralf H. Adams, Peter Vajkoczy, Marcus Czabanka
Software Mentions: 3
Published: over 3 years ago

10.1089/neu.2019.6513

Dextran 500 Improves Recovery of Inflammatory Markers: An In Vitro Microdialysis Study
Cited by: 6
Author(s): Susan Giorgi-Coll, Eric Peter Thelin, Caroline Lindblad, Tamara Tajsic, Keri L.H. Carpenter, Peter J. Hutchinson, Adel Helmy
Software Mentions: 3
Published: almost 5 years ago

10.3390/nu10101492

Digestive Responses to Fortified Cow or Goat Dairy Drinks: A Randomised Controlled Trial
Cited by: 12
Author(s): Amber M. Milan, Alison J. Hodgkinson, Sarah M. Mitchell, Utpal Kumar Prodhan, Colin G. Prosser, Elizabeth Carpenter, Karl Fraser, David Cameron‐Smith
Software Mentions: 3
Published: about 6 years ago

10.3389/fcimb.2021.625229

Dysbiosis of the Human Oral Microbiome During the Menstrual Cycle and Vulnerability to the External Exposures of Smoking and Dietary Sugar
Cited by: 21
Author(s): Nagihan Bostancı, Maria Christine Krog, Luisa W. Hugerth, Zahra Bashir, Emma Fransson, Fredrik Boulund, Georgios N. Belibasakis, Kristin Wannerberger, Lars Engstrand, Henriette Svarre Nielsen, Ina Schuppe-Koistinen
Software Mentions: 2
Published: over 3 years ago

10.3390/polym9050156

Systematic Study of a Library of PDMAEMA-Based, Superparamagnetic Nano-Stars for the Transfection of CHO-K1 Cells
Cited by: 7
Author(s): Ullrich Stahlschmidt, Valérie Jérôme, Alexander P. Majewski, Axel H. E. Müller, Ruth Freitag
Software Mentions: 2
Published: over 7 years ago

10.7554/eLife.38892

Yeast Ded1 promotes 48S translation pre-initiation complex assembly in an mRNA-specific and eIF4F-dependent manner
Cited by: 45
Author(s): Neha Gupta, Jon R. Lorsch, Alan G. Hinnebusch
Software Mentions: 2
Published: about 6 years ago

10.1002/cam4.3775

Changing trends in the disease burden of esophageal cancer in China from 1990 to 2017 and its predicted level in 25 years
Cited by: 61
Author(s): Songbo Li, Hui Chen, Jinyu Man, Tongchao Zhang, Xiaolin Yin, Qian He, Xiaorong Yang, Ming Lü
Software Mentions: 2
Published: almost 4 years ago

10.7554/eLife.59633

Dynamically evolving novel overlapping gene as a factor in the SARS-CoV-2 pandemic
Cited by: 65
Author(s): Chase W. Nelson, Zachary Ardern, Tony L. Goldberg, Chen Meng, Chen-Hao Kuo, Christina Ludwig, Sergios‐Orestis Kolokotronis, Xinzhu Wei
Software Mentions: 2
Published: about 4 years ago

10.1186/1472-6750-10-47

Optimization and analysis of a quantitative real-time PCR-based technique to determine microRNA expression in formalin-fixed paraffin-embedded samples
Cited by: 40
Author(s): Rashmi S. Goswami, Levi Waldron, Jerry Machado, Nilva K. Cervigne, Wei Xu, Patrícia P. Reis, Denis Bailey, Igor Jurišica, Michael Crump, Suzanne Kamel‐Reid
Software Mentions: 2
Published: over 14 years ago

10.1093/bioinformatics/btx775

ASAR: visual analysis of metagenomes in R
Cited by: 5
Author(s): Askarbek Orakov, Nazgul Sakenova, Anatoly Sorokin, Igor Goryanin
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13104-018-3534-z

Modes of mechanical ventilation vary between hospitals and intensive care units within a university healthcare system: a retrospective observational study
Cited by: 14
Author(s): Craig S. Jabaley, Robert F. Groff, Milad Sharifpour, Jayashree Raikhelkar, James M. Blum
Software Mentions: 2
Published: over 6 years ago

10.1186/s13104-015-1017-z

BMX: a tool for computing bacterial phyletic composition from orthologous maps
Cited by: 8
Author(s): Benard W. Kulohoma
Software Mentions: 2
Published: almost 10 years ago

10.1093/aob/mcy198

Remote tropical island colonization does not preclude symbiotic specialists: new evidence of mycorrhizal specificity across the geographic distribution of the Hawaiian endemic orchidAnoectochilus sandvicensis
Cited by: 5
Author(s): Sean O. I. Swift, Sherilyn Munroe, Chaewon Im, Laura Tipton, Nicole A. Hynson
Software Mentions: 2
Published: about 6 years ago

10.1186/s12870-016-0880-7

A fast and simple LC-MS-based characterization of the flavonoid biosynthesis pathway for few seed(ling)s
Cited by: 11
Author(s): Benjamin Jaegle, M. Kalle Uroic, Xu Holtkotte, Christina Lucas, Andreas Ole Termath, Hans‐Günther Schmalz, Marcel Bucher, Ute Hoecker, Martin Hülskamp, Andrea Schrader
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-019-53427-4

Latitudinal Distributions and Controls of Bacterial Community Composition during the Summer of 2017 in Western Arctic Surface Waters (from the Bering Strait to the Chukchi Borderland)
Cited by: 8
Author(s): Jiyoung Lee, Sung‐Ho Kang, Eun Jin Yang, Alison M. Macdonald, Hyoung Min Joo, Jun Hyung Park, Kwangmin Kim, Gi Seop Lee, Ju-Hyoung Kim, Ju-Yeon Yoon, Seong-Su Kim, Jae-Hyun Lim, Il-Nam Kim
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-30569-5

Klebsiella oxytoca expands in cancer cachexia and acts as a gut pathobiont contributing to intestinal dysfunction
Cited by: 66
Author(s): Sarah A. Pötgens, Hélène Brossel, Martina Sboarina, Émilie Catry, Patrice D. Cani, Audrey M. Neyrinck, Laure B. Bindels
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-21063-z

Cerebral ischemia induces the aggregation of proteins linked to neurodegenerative diseases
Cited by: 56
Author(s): Anja Kahl, Ismary Blanco, Katherine Jackman, Juhi Baskar, Harihar Milaganur Mohan, Reunet Rodney-Sandy, Sheng Zhang, Costantino Iadecola, Karin Hochrainer
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-020-62175-9

HLA-A, -B, -C, -DRB1, -DQA1, and -DQB1 allele and haplotype frequencies defined by next generation sequencing in a population of East Croatia blood donors
Cited by: 6
Author(s): Stana Tokić, Veronika Žižková, Mario Štefanić, Ljubica Glavaš‐Obrovac, Saška Marczi, Marina Samardžija, Kateřina Sikorová, Martin Petřek
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-017-14943-3

Cigarette smoking is associated with an altered vaginal tract metabolomic profile
Cited by: 71
Author(s): Tiffanie M. Nelson, Joanna-Lynn C. Borgogna, Ryan D. Michalek, David W. Roberts, Jessica M. Rath, Elbert D. Glover, Jacques Ravel, Michelle Shardell, Carl J. Yeoman, Rebecca M. Brotman
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-017-06231-x

CREB Regulates Distinct Adaptive Transcriptional Programs in Astrocytes and Neurons
Cited by: 33
Author(s): Luis Pardo, Luis M. Valor, Abel Eraso-Pichot, Ángel Barco, Arantxa Golbano, Giles E. Hardingham, Roser Masgrau, Elena Galea
Software Mentions: 2
Published: over 7 years ago

10.1038/srep10641

Novel EPHB4 Receptor Tyrosine Kinase Mutations and Kinomic Pathway Analysis in Lung Cancer
Cited by: 17
Author(s): Benjamin D. Ferguson, Yulong Tan, Rajani Kanteti, Ren Liu, Matthew Gayed, Everett E. Vokes, Mark K. Ferguson, A. John Iafrate, Parkash S. Gill, Ravi Salgia
Software Mentions: 2
Published: over 9 years ago

10.1186/s12968-016-0319-1

Effects of heart valve prostheses on phase contrast flow measurements in Cardiovascular Magnetic Resonance – a phantom study
Cited by: 12
Author(s): Johanna Richau, Matthias A. Dieringer, Julius Traber, Florian von Knobelsdorff‐Brenkenhoff, Andreas Greiser, Carsten Schwenke, Jeanette Schulz‐Menger
Software Mentions: 2
Published: almost 8 years ago

10.1186/s13073-017-0418-0

Genetic pleiotropy between age-related macular degeneration and 16 complex diseases and traits
Cited by: 50
Author(s): Felix Graßmann, Christina Kiel, Martina E. Zimmermann, Florian Kronenberg, Veronika Grassmann, Klaus Stark, Iris M. Heid, Bernhard H. F. Weber
Software Mentions: 2
Published: over 7 years ago

10.3390/genes10110891

Intermediate-Salinity Systems at High Altitudes in the Peruvian Andes Unveil a High Diversity and Abundance of Bacteria and Viruses
Cited by: 10
Author(s): Hugo G Castelán-Sánchez, Paola Elorrieta, Pedro Romoacca, Arturo Liñan-Torres, José Luis Sierra, Ingrid Vera, Ramón Alberto Batista-García, Silvia Tenorio-Salgado, Gabriel Lizama-Uc, Ernesto Pérez‐Rueda, María Antonieta Quispe-Ricalde, Sonia Dávila-Ramos
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2018.00655

Acacia Changes Microbial Indicators and Increases C and N in Soil Organic Fractions in Intercropped Eucalyptus Plantations
Cited by: 44
Author(s): Arthur Prudêncio de Araújo Pereira, Maurício Rumenos Guidetti Zagatto, Carolina Braga Brandani, Denise de Lourdes Colombo Mescolotti, Simone Raposo Cotta, José Leonardo de Moraes Gonçalves, Elke Jurandy Bran Nogueira Cardoso
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-021-89745-9

Beta cell adaptation to pregnancy requires prolactin action on both beta and non-beta cells
Cited by: 9
Author(s): Vipul Shrivastava, Megan Lee, Daniel Lee, Marle Pretorius, Bethany Radford, Guneet Makkar, Carol Huang
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2020.01781

Geochemistry and Microbiology Predict Environmental Niches With Conditions Favoring Potential Microbial Activity in the Bakken Shale
Cited by: 11
Author(s): Kara Tinker, James Gardiner, Daniel Lipus, Preom Sarkar, Mengling Stuckman, Djuna Gulliver
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2018.01462

Sewage Sludge Microbial Structures and Relations to Their Sources, Treatments, and Chemical Attributes
Cited by: 98
Author(s): Andréa M. A. Nascimento, Adijailton José de Souza, Pedro Avelino Maia de Andrade, Fernando Dini Andreote, Aline Renée Coscione, Fernando Carvalho Oliveira, Jussara Borges Regitano
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2018.01886

Pan-Genomic Study of Mycobacterium tuberculosis Reflecting the Primary/Secondary Genes, Generality/Individuality, and the Interconversion Through Copy Number Variations
Cited by: 29
Author(s): Tingting Yang, Jun Zhong, Ju Zhang, Cuidan Li, Xia Yu, Jingfa Xiao, Xiaoyun Jia, Nan Ding, Ge Ma, Guirong Wang, Liya Yue, Qian Liang, Yongjie Sheng, Yanhong Sun, Hairong Huang, Fei Chen
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.02978

Genomic Characterization of a Novel Gut Symbiont From the Hadal Snailfish
Cited by: 23
Author(s): Chun-Ang Lian, Guoyong Yan, Junzhe Huang, Antoine Danchin, Yong Wang, Lisheng He
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmed.2020.00112

Single-Cell Transcriptional Profiling of Cells Derived From Regenerating Alveolar Ducts
Cited by: 3
Author(s): Alexandra B. Ysasi, Robert D. Bennett, Willi L. Wagner, Cristian D. Valenzuela, Andrew B. Servais, Akira Tsuda, Saumyadipta Pyne, Shuqiang Li, Jonna Grimsby, Prapti Pokharel, Kenneth J. Livak, Maximilian Ackermann, Paul C. Blainey, Steven J. Mentzer
Software Mentions: 2
Published: over 4 years ago

10.1038/srep08496

Temperature and solids retention time control microbial population dynamics and volatile fatty acid production in replicated anaerobic digesters
Cited by: 98
Author(s): Inka Vanwonterghem, Paul D. Jensen, Korneel Rabaey, Gene W. Tyson
Software Mentions: 2
Published: almost 10 years ago

10.3389/fnbeh.2021.706079

Sex-Specific Social Behavior and Amygdala Proteomic Deficits in Foxp2+/− Mutant Mice
Cited by: 5
Author(s): María Jesús Presentación Herrero, Li Wang, David Hernandez‐Pineda, Payal Banerjee, Heidi Y. Matos, Meredith Goodrich, Aswini K. Panigrahi, Nathan A. Smith, Joshua G. Corbin
Software Mentions: 2
Published: over 3 years ago

10.3390/diagnostics10070453

COVID-19 Serological Tests: How Well Do They Actually Perform?
Cited by: 104
Author(s): Abdi Ghaffari, Robyn Meurant, Ali Ardakani
Software Mentions: 2
Published: over 4 years ago

10.1186/2193-1801-3-431

STRUCTURE PLOT: a program for drawing elegant STRUCTURE bar plots in user friendly interface
Cited by: 294
Author(s): Ramesh Ramasamy, R. Sumathy, B. B. Bindroo, V. Girish Naik
Software Mentions: 2
Published: over 10 years ago

10.1186/s13287-020-01706-7

Mass spectrometric analysis of the in vitro secretome from equine bone marrow-derived mesenchymal stromal cells to assess the effect of chondrogenic differentiation on response to interleukin-1β treatment
Cited by: 19
Author(s): Louise Bundgaard, Allan Stensballe, Kirstine Juul Elbæk, Lise C. Berg
Software Mentions: 2
Published: over 4 years ago

10.1186/s13148-015-0047-7

Identification of novel long non-coding RNAs in clear cell renal cell carcinoma
Cited by: 73
Author(s): Jasmine Jc Blondeau, Mario C. Deng, Isabella Syring, Sarah Schrödter, Doris Schmidt, Sven Perner, Stefan Müller, Jörg Ellinger
Software Mentions: 2
Published: almost 10 years ago

10.15698/cst2017.10.106

mIDH-associated DNA hypermethylation in acute myeloid leukemia reflects differentiation blockage rather than inhibition of TET-mediated demethylation
Cited by: 3
Author(s): Laura Wiehle, Günter Raddatz, Stefan Pusch, Julian Gutekunst, Andreas von Deimling, Manuel Rodríguez-Paredes, Frank Lyko
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0097338

Core Microbial Functional Activities in Ocean Environments Revealed by Global Metagenomic Profiling Analyses
Cited by: 18
Author(s): Ari J. S. Ferreira, Rania Siam, João Carlos Setúbal, Ahmed Moustafa, Ahmed A. Sayed, Felipe S. Chambergo, Adam Dawe, Mohamed A. Ghazy, Hazem Sharaf, Amged Ouf, Intikhab Álam, Alyaa M. Abdel-Haleem, Heikki Lehväslaiho, Eman Ramadan, André Antunes, Ulrich Stingl, John Archer, Boris R. Janković, Mitchell L. Sogin, Vladimir B. Bajic, Hamza A. El-Dorry
Software Mentions: 2
Published: over 10 years ago

10.1128/AEM.00515-17

Microbiota in Exhaled Breath Condensate and the Lung
Cited by: 14
Author(s): Laura Glendinning, Steven H. Wright, Peter Tennant, Andrew C. Gill, David Collie, Gerry McLachlan
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0124969

Transcriptional and Phenotypic Characterization of Novel Spx-Regulated Genes in Streptococcus mutans
Cited by: 28
Author(s): Lívia C. C. Galvão, James H. Miller, Jessica K. Kajfasz, Kathy Scott-Anne, Irlan Almeida Freires, Gilson César Nobre Franco, Jacqueline Abranches, Pedro Luiz Rosalen, José A. Lemos
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0196325

Population structure in Argentina
Cited by: 36
Author(s): Marina Muzzio, Josefina María Brenda Motti, Paula B. Paz Sepúlveda, Muh-Ching Yee, Thomas F. Cooke, Maria Rita de Morais Chaves Santos, Virgínia Ramallo, Emma Alfaro, José Edgardo Dipierri, Graciela Bailliet, Cláudio M. Bravi, Carlos D. Bustamante, Eimear E. Kenny
Software Mentions: 2
Published: over 6 years ago

10.1038/s41396-019-0520-y

Genomic, transcriptomic, and proteomic insights into the symbiosis of deep-sea tubeworm holobionts
Cited by: 40
Author(s): Yi Yang, Jin Sun, Yanan Sun, Yick Hang Kwan, Wai Chuen Wong, Yanjie Zhang, Ting Xu, Feng Dong, Yu Zhang, Jian‐Wen Qiu, Pei‐Yuan Qian
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0008623

Serological Patterns of Brucellosis, Leptospirosis and Q Fever in Bos indicus Cattle in Cameroon
Cited by: 64
Author(s): Francesca Scolamacchia, Ian Handel, Eric M. Fèvre, K. L. Morgan, Vincent N. Tanya, Barend M. deC. Bronsvoort
Software Mentions: 2
Published: almost 15 years ago

10.1371/journal.pone.0137762

Using Co-Expression Analysis and Stress-Based Screens to Uncover Arabidopsis Peroxisomal Proteins Involved in Drought Response
Cited by: 27
Author(s): Jiying Li, Jianping Hu
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pntd.0003446

Conservation and Immunogenicity of Novel Antigens in Diverse Isolates of Enterotoxigenic Escherichia coli
Cited by: 60
Author(s): Qingwei Luo, Firdausi Qadri, Rita G. Kansal, David A. Rasko, Alaullah Sheikh, James M. Fleckenstein
Software Mentions: 2
Published: almost 10 years ago

10.7717/peerj.10678

TET2 mutations in acute myeloid leukemia: a comprehensive study in patients of Sindh, Pakistan
Cited by: 4
Author(s): Abdul Rehman Shaikh, Ikram Uddin Ujjan, Muhammad Irfan, Arshi Naz, Tahir Shamsi, Muhammad Tariq Masood Khan, Muhammad Shakeel
Software Mentions: 2
Published: almost 4 years ago

10.7717/peerj.10053

Silicon flow from root to shoot in pepper: a comprehensive in silico analysis reveals a potential linkage between gene expression and hormone signaling that stimulates plant growth and metabolism
Cited by: 9
Author(s): Fernando Carlos Gómez-Meriño, Libia Iris Trejo-Téllez, Atonaltzin García-Jiménez, Hugo Fernando Escobar-Sepúlveda, Sara Monzerrat Ramírez-Olvera
Software Mentions: 2
Published: about 4 years ago

10.3390/pathogens6040045

The Use of Hyperimmune Chicken Reference Sera Is Not Appropriate for the Validation of Influenza Pseudotype Neutralization Assays
Cited by: 0
Author(s): Francesca Ferrara, Eleonora Molesti, Simon D. Scott, Giovanni Cattoli, Nigel Temperton
Software Mentions: 2
Published: about 7 years ago

10.1186/s13071-019-3405-z

Interpreting mosquito feeding patterns in Australia through an ecological lens: an analysis of blood meal studies
Cited by: 18
Author(s): Eloise Stephenson, Amanda K. Murphy, Cassie C. Jansen, Alison J. Peel, Hamish McCallum
Software Mentions: 2
Published: over 5 years ago

10.3390/vetsci7020061

Using Manual and Computer-Based Text-Mining to Uncover Research Trends for Apis mellifera
Cited by: 3
Author(s): Esmaeil Amiri, Prashant Waiker, Olav Rueppell, Prashanti Manda
Software Mentions: 2
Published: over 4 years ago

10.1016/j.omtm.2018.06.006

Prevalence of Pre-existing Antibodies to CRISPR-Associated Nuclease Cas9 in the USA Population
Cited by: 168
Author(s): Vijaya L. Simhadri, Joseph R. McGill, Shane McMahon, Junxia Wang, Haiyan Jiang, Zuben E. Sauna
Software Mentions: 2
Published: about 6 years ago

10.3390/molecules26061644

Anti-Cancer Effects of Carnosine—A Dipeptide Molecule
Cited by: 13
Author(s): Monica D. Prakash, Sarah Fraser, Jennifer C. Boer, Magdalena Plebanski, Barbora de Courten, Vasso Apostolopoulos
Software Mentions: 2
Published: over 3 years ago

10.1186/s12863-014-0108-5

Genome wide linkage disequilibrium and genetic structure in Sicilian dairy sheep breeds
Cited by: 33
Author(s): Salvatore Mastrangelo, Rosalia Di Gerlando, Marco Tolone, Lina Tortorici, Maria Teresa Sardina, Baldassare Portolano
Software Mentions: 2
Published: about 10 years ago

10.1074/mcp.M114.044289

Global Proteomics Analysis of the Response to Starvation in C. elegans*
Cited by: 29
Author(s): Mark Larance, Ehsan Pourkarimi, Bin Wang, Alejandro Brenes Murillo, Robert E. Kent, Angus I. Lamond, Anton Gartner
Software Mentions: 2
Published: over 9 years ago

10.1186/s12943-016-0495-5

Identification of the dopamine transporter SLC6A3 as a biomarker for patients with renal cell carcinoma
Cited by: 51
Author(s): Sarah Schrödter, Martin Braun, Isabella Syring, Niklas Klümper, Mario C. Deng, Doris Schmidt, Sven Perner, Stefan Müller, Jörg Ellinger
Software Mentions: 2
Published: almost 9 years ago

10.3390/microorganisms8121896

Comparative Analysis of the Global Transcriptomic Response to Oxidative Stress of Bacillus anthracis htrA-Disrupted and Parental Wild Type Strains
Cited by: 4
Author(s): Galia Zaide, Uri Elia, Inbar Cohen-Gihon, Moshe Israeli, Shahar Rotem, Ofir Israeli, Sharon Ehrlich, Hila Cohen, Shirley Lazar, Adi Beth-Din, Avigdor Shafferman, Anat Zvi, Ofer Cohen, Theodor Chitlaru
Software Mentions: 2
Published: almost 4 years ago

10.1186/s40168-017-0364-5

Comparing microbiotas in the upper aerodigestive and lower respiratory tracts of lambs
Cited by: 20
Author(s): Laura Glendinning, David Collie, Steven H. Wright, Kenny Rutherford, Gerry McLachlan
Software Mentions: 2
Published: about 7 years ago

10.1186/s40168-020-00930-w

Uncovering the genomic potential of the Amazon River microbiome to degrade rainforest organic matter
Cited by: 14
Author(s): Célio Dias Santos Júnior, Hugo Sarmento, Fernando Miranda, Flávio Henrique-Silva, Ramiro Logares
Software Mentions: 2
Published: about 4 years ago

10.1128/MRA.00479-20

Nearly Complete Genome Sequence of Brugia pahangi FR3
Cited by: 4
Author(s): John Mattick, Silvia Libro, Benjamin C. Sparklin, Matthew Chung, Robin E. Bromley, Suvarna Nadendla, Xüna Zhao, Sandra Ott, Lisa Sadzewicz, Luke J. Tallon, Michelle L. Michalski, Jeremy M. Foster, Julie C. Dunning Hotopp
Software Mentions: 2
Published: over 4 years ago

10.1186/s12862-020-01630-7

The green-brown polymorphism of the club-legged grasshopper Gomphocerus sibiricus is heritable and appears genetically simple
Cited by: 5
Author(s): Holger Schielzeth, Petra Dieker
Software Mentions: 2
Published: over 4 years ago

10.1186/s12936-017-1950-5

Host attraction and biting behaviour of Anopheles mosquitoes in South Halmahera, Indonesia
Cited by: 21
Author(s): Brandyce St. Laurent, Timothy A. Burton, Siti Zubaidah, Helen C. Miller, Puji Budi Setia Asih, Amirullah Baharuddin, Sully Kosasih, Shinta, Saya Firman, William A. Hawley, Thomas R. Burkot, Supratman Supratman, Frank H. Collins, Neil F. Lobo
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.ppat.1003070

Attenuated Salmonella Typhimurium Lacking the Pathogenicity Island-2 Type 3 Secretion System Grow to High Bacterial Numbers inside Phagocytes in Mice
Cited by: 55
Author(s): A. Grant, Fiona J. E. Morgan, Trevelyan J. McKinley, Gemma Foster, Duncan J. Maskell, Pietro Mastroeni
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0099058

Increases in Myocardial Workload Induced by Rapid Atrial Pacing Trigger Alterations in Global Metabolism
Cited by: 7
Author(s): Aslan T. Turer, Gregory D. Lewis, John O’Sullivan, Sammy Elmariah, Jessica L. Mega, Tayo Addo, Marc S. Sabatine, James A. de Lemos, Robert E. Gerszten
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0184414

Comparative skull anatomy of terrestrial and crevice-dwelling Trachylepis skinks (Squamata: Scincidae) with a survey of resources in scincid cranial osteology
Cited by: 19
Author(s): Daniel J. Paluh, Aaron M. Bauer
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0155552

Global Carrier Rates of Rare Inherited Disorders Using Population Exome Sequences
Cited by: 15
Author(s): Kohei Fujikura
Software Mentions: 1
Published: over 8 years ago

10.3389/fpubh.2021.577789

Biodiversity of Potential Vectors of Rickettsiae and Epidemiological Mosaic of Spotted Fever in the State of Paraná, Brazil
Cited by: 5
Author(s): Liliane Silva Durães, Karla Bitencourth, Frederico Rodrigues Ramalho, Mário Círio Nogueira, Emília de Carvalho Nunes, Gilberto Salles Gazêta
Software Mentions: 1
Published: over 3 years ago

10.3389/fphar.2020.01322

Unraveling the Pharmacological Potential of Lichen Extracts in the Context of Cancer and Inflammation With a Broad Screening Approach
Cited by: 27
Author(s): Rebecca Ingelfinger, Marina Henke, Luise Roser, Thomas Ulshöfer, Anjuli Calchera, Garima Singh, Michael J. Parnham, Gerd Geißlinger, Robert Fürst, Imke Schmitt, Susanne Schiffmann
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0041508

Tracking the Emergence of a New Breed Using 49,034 SNP in Sheep
Cited by: 9
Author(s): James W. Kijas, James E. Miller, Tracy Hadfield, Russell McCulloch, E. García‐Gámez, Laércio R. Porto-Neto, Noelle E. Cockett
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-019-51282-x

Co-expression of synaptic genes in the sponge Amphimedon queenslandica uncovers ancient neural submodules
Cited by: 11
Author(s): Eunice Wong, Jan Mölter, Victor Anggono, Sandie M. Degnan, Bernard M. Degnan
Software Mentions: 1
Published: about 5 years ago

10.1186/s12870-016-0833-1

Tartaric acid pathways in Vitis vinifera L. (cv. Ugni blanc): a comparative study of two vintages with contrasted climatic conditions
Cited by: 34
Author(s): Céline Cholet, Stéphane Claverol, Olivier Claisse, Amélie Rabot, Audrey Osowsky, Vincent Dumot, G. Ferrari, Laurence Gény
Software Mentions: 1
Published: over 8 years ago

10.3390/cells10051001

Broad-Spectrum HDAC Inhibitors Promote Autophagy through FOXO Transcription Factors in Neuroblastoma
Cited by: 15
Author(s): Katharina Körholz, Johannes Ridinger, Damir Krunic, Sara Najafi, Xenia F Gerloff, Karen Frese, Benjamin Meder, Heike Peterziel, Silvia Vega-Rubín-de-Celis, Olaf Witt, Ina Oehme
Software Mentions: 1
Published: over 3 years ago

10.3389/fmicb.2021.646300

Nucleotide Composition and Codon Usage Across Viruses and Their Respective Hosts
Cited by: 21
Author(s): Diego Simón, Juan Cristina, Héctor Musto
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pgen.1007050

Loss of Xist RNA from the inactive X during B cell development is restored in a dynamic YY1-dependent two-step process in activated B cells
Cited by: 64
Author(s): Camille M. Syrett, Vishal Sindhava, Suchita Hodawadekar, Arpita Myles, Guanxiang Liang, Yue Zhang, Satabdi Nandi, Michael P. Cancro, Michael L. Atchison, Montserrat C. Anguera
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-021-94810-4

Specificity of UV-C LED disinfection efficacy for three N95 respirators
Cited by: 5
Author(s): C. Carolina Ontiveros, David C. Shoults, Sean A. MacIsaac, Kyle D. Rauch, Crystal L. Sweeney, Amina K. Stoddart, Graham A. Gagnon
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pgen.1006347

Multiple Pairwise Analysis of Non-homologous Centromere Coupling Reveals Preferential Chromosome Size-Dependent Interactions and a Role for Bouquet Formation in Establishing the Interaction Pattern
Cited by: 7
Author(s): Philippe Lefrançois, Beth Rockmill, Pingxing Xie, G. Shirleen Roeder, M Snyder
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0202196

Genetic homogeneity of North-African goats
Cited by: 10
Author(s): N. A. Ouchene-Khelifi, Mohamed Lafri, François Pompanon, Abdessamad Ouhrouch, Nassim Ouchene, Véronique Blanquet, Johannes A. Lenstra, Badr Benjelloun, Anne Da Silva
Software Mentions: 1
Published: over 6 years ago

10.3389/fgene.2018.00687

Genome Sequencing of Blacklip and Greenlip Abalone for Development and Validation of a SNP Based Genotyping Tool
Cited by: 8
Author(s): James W. Kijas, Matthew Hamilton, Natasha A. Botwright, Hilary King, Luke McPherson, Anton Krsinich, Sean McWilliam
Software Mentions: 1
Published: almost 6 years ago

Projects: cran: RColorBrewer

Papers Mentioning RColorBrewer 490