Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: RAT
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/RAT
Research Assessment Tools
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Latest release: over 2 years ago
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Papers Mentioning RAT 48
10.1155/2014/851425
Large-Scale Genomic Analysis of Codon Usage in Dengue Virus and Evaluation of Its Phylogenetic DependenceCited by: 22
Author(s): Edgar E. Lara-Ramírez, Ma Isabel Salazar, María de Jesús López-López, Juan Santiago Salas-Benito, Alejandro Sánchez-Varela, Xianwu Guo
Software Mentions: 7
Published: almost 11 years ago
10.1371/journal.pone.0067511
Evolutionary Dynamics of the Accessory Genome of Listeria monocytogenesCited by: 55
Author(s): Henk C. den Bakker, Christopher A. Desjardins, Allison Griggs, Joseph E. Peters, Qiandong Zeng, Sarah Young, Chinnappa D. Kodira, Chandri Yandava, Theresa A. Hepburn, Brian J. Haas, Bruce W. Birren, Martin Wiedmann
Software Mentions: 4
Published: over 11 years ago
10.1371/journal.pgen.1000456
Rapid and Accurate Multiple Testing Correction and Power Estimation for Millions of Correlated MarkersCited by: 170
Author(s): Buhm Han, Hyun Min Kang, Eleazar Eskin
Software Mentions: 4
Published: over 15 years ago
10.1186/s12879-020-05038-y
Abstracts from the International Science Symposium on HIV and Infectious Diseases (ISSHID 2019): Infectious diseasesCited by: 4
Author(s):
Software Mentions: 3
Published: over 4 years ago
10.3389/fmicb.2021.633710
Viruses Without Borders: Global Analysis of the Population Structure, Haplotype Distribution, and Evolutionary Pattern of Iris Yellow Spot Orthotospovirus (Family Tospoviridae, Genus Orthotospovirus)Cited by: 2
Author(s): Afsha Tabassum, S. V. Ramesh, Ying Zhai, Romana Iftikhar, Cristián Olaya
Software Mentions: 3
Published: over 3 years ago
10.1093/ve/veaa056
The evolutionary history and global spatio-temporal dynamics of potato virus YCited by: 14
Author(s): Fangluan Gao, Shusuke Kawakubo, Simon Y. W. Ho, Kazusato Ohshima
Software Mentions: 3
Published: over 4 years ago
10.3390/s18051643
Analyzing Cyber-Physical Threats on Robotic PlatformsCited by: 30
Author(s): Khalil M. Ahmad Yousef, Anas AlMajali, Salah Abu Ghalyon, Waleed Dweik, Bassam Jamil Mohd
Software Mentions: 3
Published: over 6 years ago
10.1186/s40163-021-00156-7
The impact of strict measures as a result of the COVID-19 pandemic on the spatial pattern of the demand for police: case study Antwerp (Belgium)Cited by: 4
Author(s): Maite Dewinter, Christophe Vandeviver, Philipp M. Dau, Tom Vander Beken, Frank Witlox
Software Mentions: 2
Published: about 3 years ago
10.1186/s12913-015-0838-8
Rapid assessment of infrastructure of primary health care facilities – a relevant instrument for health care systems managementCited by: 36
Author(s): Stefan Scholz, Baltazar Ngoli, Steffen Fleßa
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0235698
The effects of risk-taking, exploitation, and exploration on creativityCited by: 9
Author(s): Tsutomu Harada
Software Mentions: 2
Published: over 4 years ago
10.3390/v4091548
Genomic Sequences of Two Novel Levivirus Single-Stranded RNA Coliphages (Family Leviviridae): Evidence for Recombination in Environmental StrainsCited by: 6
Author(s): Stephanie D. Friedman, Wyatt C. Snellgrove, Fred J. Genthner
Software Mentions: 2
Published: over 12 years ago
10.18632/oncotarget.5992
Comparing the clinical outcomes in stereotactic body radiotherapy for lung tumors between Ray-Tracing and Monte-Carlo algorithmsCited by: 9
Author(s): Jin Ho Song, Ki Mun Kang, Hyejung Choi, Hojin Jeong, In Bong Ha, Jong Deog Lee, Ho Cheol Kim, Yi Yeong Jeong, Yu Ji Cho, Seung Jun Lee, Sung Hwan Kim, In‐Seok Jang, Bae Kwon Jeong
Software Mentions: 2
Published: about 9 years ago
10.1002/brb3.1895
Intact microstructure of the right corticostriatal pathway predicts creative ability in healthy adultsCited by: 1
Author(s): Farzaneh Rahmani, Hossein Sanjari Moghaddam, Mohammad Hadi Aarabi
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-020-63326-8
Species specific gene expression dynamics during harmful algal bloomsCited by: 8
Author(s): Gabriel Metegnier, Sauvann Paulino, Pierre Ramond, Raffaele Siano, Marc Sourisseau, Christophe Destombe, Mickaël Le Gac
Software Mentions: 2
Published: over 4 years ago
10.1093/emph/eot019
How effectively can HIV phylogenies be used to measure heritability?Cited by: 24
Author(s): George Shirreff, Samuel Alizon, Anne Cori, Huldrych F Günthard, Oliver Laeyendecker, Ard van Sighem, Daniela Bezemer, Christophe Fraser
Software Mentions: 1
Published: almost 12 years ago
10.3389/fpsyg.2017.00950
Affective and Engagement Issues in the Conception and Assessment of a Robot-Assisted Psychomotor Therapy for Persons with DementiaCited by: 34
Author(s): Natacha Rouaix, Laure Retru-Chavastel, Anne‐Sophie Rigaud, Clotilde Monnet, H. Lenoir, Maribel Pino
Software Mentions: 1
Published: over 7 years ago
10.3389/fpsyg.2020.573432
A Systematic Review of Creativity-Related Studies Applying the Remote Associates Test From 2000 to 2019Cited by: 29
Author(s): Ching Lin Wu, Shong Huang, Pei-Zhen Chen, Hsueh Chih Chen
Software Mentions: 1
Published: about 4 years ago
10.3389/fpsyg.2018.02450
From Broken Windows to Perceived Routine Activities: Examining Impacts of Environmental Interventions on Perceived Safety of Urban AlleysCited by: 31
Author(s): Bin Jiang, Cecilia Nga Sze Mak, Hua Zhong, Linda Larsen, Chris Webster
Software Mentions: 1
Published: about 6 years ago
10.3389/fpsyg.2019.00926
Visual and Linguistic Stimuli in the Remote Associates Test: A Cross-Cultural InvestigationCited by: 11
Author(s): Teemu Toivainen, Ana‐Maria Oltețeanu, Vlada Repeykova, Maxim Likhanov, Yulia Kovas
Software Mentions: 1
Published: over 5 years ago
10.3389/fpsyg.2021.689932
Distributed Cognition and the Experience of Presence in the Mars Exploration Rover MissionCited by: 1
Author(s): Dan Chiappe, John Vervaeke
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.ppat.1006215
Comparative analysis estimates the relative frequencies of co-divergence and cross-species transmission within viral familiesCited by: 197
Author(s): Jemma L. Geoghegan, Sebastián Duchêne, Edward C. Holmes
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-019-50741-9
Biphasic adverse effect of titanium nanoparticles on testicular function in miceCited by: 12
Author(s): Nobuhiko Miura, Kazuhiro Ohtani, Tatsuya Hasegawa, Hiroki Yoshioka, Gi Wook Hwang
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-019-52452-7
Exotic magnetic behaviour and evidence of cluster glass and Griffiths like phase in Heusler alloys Fe2-xMnxCrAl (0 ≤ x ≤ 1)Cited by: 20
Author(s): Kavita Yadav, Mohit K. Sharma, Sanjay Singh, K. Mukherjee
Software Mentions: 1
Published: about 5 years ago
10.3390/s150818402
A Novel Speed Compensation Method for ISAR Imaging with Low SNRCited by: 9
Author(s): Yongxiang Liu, Shuanghui Zhang, Dekang Zhu, Xiang Li
Software Mentions: 1
Published: over 9 years ago
10.3390/s17030445
A Topology Control Strategy with Reliability Assurance for Satellite Cluster Networks in Earth ObservationCited by: 4
Author(s): Qing Chen, Jinxiu Zhang, Ze Hu
Software Mentions: 1
Published: almost 8 years ago
10.3390/s17030550
Road Traffic Anomaly Detection via Collaborative Path Inference from GPS SnippetsCited by: 11
Author(s): Hongtao Wang, Hui Wen, Yi Feng, Hongsong Zhu, Limin Sun
Software Mentions: 1
Published: almost 8 years ago
10.1186/1751-0473-4-7
ParaHaplo: A program package for haplotype-based whole-genome association study using parallel computingCited by: 6
Author(s): Kazuharu Misawa, Naoyuki Kamatani
Software Mentions: 1
Published: about 15 years ago
10.1186/2193-1801-2-128
Integrin triplets of marine sponges in the murine and human MHCI-CD8 interface and in the interface of human neural receptor heteromers and subunitsCited by: 9
Author(s): Alexander O. Tarakanov, Kjell Fuxé
Software Mentions: 1
Published: almost 12 years ago
10.1186/1742-4682-10-38
Tumor necrosis factor receptor superfamily 10B (TNFRSF10B): an insight from structure modeling to virtual screening for designing drug against head and neck cancerCited by: 21
Author(s): Rana Adnan Tahir, Sheikh Arslan Sehgal, Naureen Aslam Khattak, Jabar Zaman Khan Khattak, Asif Mir
Software Mentions: 1
Published: over 11 years ago
10.1007/s12117-012-9182-0
On ‘Organized Crime’ in the illicit antiquities trade: moving beyond the definitional debateCited by: 18
Author(s): Jessica Dietzler
Software Mentions: 1
Published: almost 12 years ago
10.3390/ijerph18073763
Smartphone Addiction and Cybercrime Victimization in the Context of Lifestyles Routine Activities and Self-Control Theories: The User’s Dual Vulnerability Model of Cybercrime VictimizationCited by: 10
Author(s): Juan Herrero, Andréa Torres, Pep Vivas, Antonio Hidalgo Nuchera, Francisco Javier Iglesias Rodríguez, Alberto Urueña
Software Mentions: 1
Published: over 3 years ago
10.3390/ijerph18115883
Speed, Change of Direction Speed and Reactive Agility in Adolescent Soccer Players: Age Related DifferencesCited by: 11
Author(s): Slobodan Andrašić, Marko Gušić, Milica Stanković, Draženka Mačak, Asim Bradić, Goran Sporiš, Nebojša Trajković
Software Mentions: 1
Published: over 3 years ago
10.1007/s10935-020-00602-3
Predictive Extrinsic Factors in Multiple Victim ShootingsCited by: 4
Author(s): Daniel Ruderman, Ellen G. Cohn
Software Mentions: 1
Published: over 4 years ago
10.1186/s12885-020-07572-z
Development, validation and effectiveness of diagnostic prediction tools for colorectal cancer in primary care: a systematic reviewCited by: 11
Author(s): Bogdan Grigore, Ruth Lewis, Jaime Peters, Sophie Robinson, Christopher Hyde
Software Mentions: 1
Published: about 4 years ago
10.1523/ENEURO.0485-19.2020
Rodent Arena Tracker (RAT): A Machine Vision Rodent Tracking Camera and Closed Loop Control SystemCited by: 23
Author(s): Jonathan Krynitsky, Alex A. Legaria, Julia Pai, Marcial Garmendia‐Cedillos, Ghadi Salem, Tom Pohida, Alexxai V. Kravitz
Software Mentions: 1
Published: over 4 years ago
10.1186/1471-2229-10-35
Sequence analysis of two alleles reveals that intra-and intergenic recombination played a role in the evolution of the radish fertility restorer (Rfo)Cited by: 27
Author(s): José Ramón Hernández Mora, Éric Rivals, Hakim Mireau, Françoise Budar
Software Mentions: 1
Published: almost 15 years ago
10.1186/1745-6150-6-55
The rhizome of Reclinomonas americana, Homo sapiens, Pediculus humanus and Saccharomyces cerevisiae mitochondriaCited by: 28
Author(s): Kalliopi Georgiades, Didier Raoult
Software Mentions: 1
Published: almost 14 years ago
10.15766/mep_2374-8265.10856
Maternal-Fetal Physiology, Intrapartum Care, Postpartum Care: A Team-Based Learning Module for Normal ObstetricsCited by: 1
Author(s): Lindsey B Sward, Sara Tariq
Software Mentions: 1
Published: about 5 years ago
10.1007/s40670-019-00844-9
Can Team-Based Learning (TBL) Be Used to Deliver Postgraduate Education in Transfusion Medicine for UK Physicians?Cited by: 0
Author(s): Jane Graham, Conrad Hayes, Kate Pendry
Software Mentions: 1
Published: about 5 years ago
10.1186/s13567-016-0399-9
Heterogeneous antigenic properties of the porcine reproductive and respiratory syndrome virus nucleocapsidCited by: 10
Author(s): J. Rappe, Obdulio Garcìa-Nicolàs, Franziska Flückiger, Barbara Thür, Martin Hofmann, Artur Summerfield, Nicolas Ruggli
Software Mentions: 1
Published: about 8 years ago
10.1098/rstb.2018.0433
Drawing parallels in human–other interactions: a trans-disciplinary approach to developing human–robot interaction methodologiesCited by: 38
Author(s): Emily C. Collins
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0203131
Individual differences in exploration and persistence: Grit and beliefs about ability and rewardCited by: 12
Author(s): Gillian Dale, Danielle Sampers, Stephanie Loo, C. Shawn Green
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0062593
Self-Affirmation Improves Problem-Solving under StressCited by: 66
Author(s): J. David Creswell, Janine M. Dutcher, William M. P. Klein, Peter R. Harris, John M. Levine
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0055677
Origin of African Physacanthus (Acanthaceae) via Wide HybridizationCited by: 14
Author(s): Erin A. Tripp, Siti Fatimah, Iain Darbyshire, Lucinda A. McDade
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0029857
What You May Not See Might Slow You Down Anyway: Masked Images and DrivingCited by: 8
Author(s): Ben Lewis-Evans, Dick de Waard, Jacob Jolij, Karel Brookhuis
Software Mentions: 1
Published: almost 13 years ago
10.1371/journal.pone.0081469
Synonymous Codon Usage in TTSuV2: Analysis and Comparison with TTSuV1Cited by: 46
Author(s): Zhicheng Zhang, Wei Dai, Dingzhen Dai
Software Mentions: 1
Published: about 11 years ago
10.1016/j.cognition.2019.02.016
Reconsidering unconscious persistence: Suppressing unwanted memories reduces their indirect expression in later thoughtsCited by: 26
Author(s): Yingying Wang, Andrea I. Luppi, Jonathan M. Fawcett, Michael C. Anderson
Software Mentions: 1
Published: over 5 years ago
10.1289/ehp.0800158
Chronic Dietary Exposure to a Low-Dose Mixture of Genistein and Vinclozolin Modifies the Reproductive Axis, Testis Transcriptome, and FertilityCited by: 117
Author(s): Florence Eustache, Françoise Mondon, Marie Chantal Canivenc-Lavier, Corinne Lesaffre, Y. Fulla, Raymond Bergès, Jean Pierre Cravedi, Daniel Vaiman, Jacques Auger
Software Mentions: 1
Published: over 15 years ago