Ecosyste.ms: Papers

10.1093/bib/bbz130

An extensive review of tools for manual annotation of documents
Cited by: 62
Author(s): Mariana Neves, Jurica Ševa
Software Mentions: 6
Published: about 5 years ago

10.1186/s13029-016-0057-7

TagDigger: user-friendly extraction of read counts from GBS and RAD-seq data
Cited by: 12
Author(s): Lindsay V. Clark, Erik J. Sacks
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0134880

Heterozygous Mapping Strategy (HetMappS) for High Resolution Genotyping-By-Sequencing Markers: A Case Study in Grapevine
Cited by: 99
Author(s): Katie E. Hyma, Paola Barba, Minghui Wang, Jason P. Londo, Charlotte B. Acharya, Sharon E. Mitchell, Qi Sun, Bruce I. Reisch, Lance Cadle‐Davidson
Software Mentions: 5
Published: over 9 years ago

10.1038/srep19244

Evaluation of the 2b-RAD method for genomic selection in scallop breeding
Cited by: 57
Author(s): Jun Dou, Xue Li, Qiang Fu, Wenqian Jiao, Yangping Li, Tianqi Li, Yangfan Wang, Xiaoli Hu, Shi Wang, Zhenmin Bao
Software Mentions: 5
Published: almost 9 years ago

10.1111/eva.13220

Not that clean: Aquaculture‐mediated translocation of cleaner fish has led to hybridization on the northern edge of the species' range
Cited by: 9
Author(s): Ellika Faust, Eva Jansson, Carl André, Kim Tallaksen Halvorsen, Geir Dahle, Halvor Knutsen, María Quintela, Kevin A. Glover
Software Mentions: 5
Published: over 3 years ago

10.1186/1471-2105-9-295

Systems biology driven software design for the research enterprise
Cited by: 18
Author(s): John P. Boyle, Christopher C. Cavnor, Sarah Killcoyne, Ilya Shmulevich
Software Mentions: 4
Published: over 16 years ago

10.1371/journal.pntd.0007921

Comparative genomics and full-length Tprk profiling of Treponema pallidum subsp. pallidum reinfection
Cited by: 18
Author(s): Amin Addetia, Lauren C. Tantalo, Michelle J. Lin, Hong Xie, Meei‐Li Huang, Christina M. Marra, Alexander L. Greninger
Software Mentions: 4
Published: over 4 years ago

10.1111/pbi.12835

Genotyping-by-sequencing through transcriptomics: implementation in a range of crop species with varying reproductive habits and ploidy levels
Cited by: 27
Author(s): M. Michelle Malmberg, Luke W. Pembleton, Rebecca C. Baillie, Michelle C. Drayton, Shimna Sudheesh, Sukhjiwan Kaur, Hiroshi Shinozuka, Preeti Verma, Germán Spangenberg, Hans D. Daetwyler, John W. Forster, Noel O. I. Cogan
Software Mentions: 4
Published: about 7 years ago

10.1534/g3.120.401497

Comparative Genomic Analyses and a Novel Linkage Map for Cisco (<i>Coregonus artedi)</i> Provide Insights into Chromosomal Evolution and Rediploidization Across Salmonids
Cited by: 13
Author(s): Danielle M. Blumstein, Matthew A. Campbell, Matthew C. Hale, Ben J. G. Sutherland, Garrett J. McKinney, Wendylee Stott, Wesley A. Larson
Software Mentions: 4
Published: over 4 years ago

10.1534/g3.115.023481

A Major Locus Controls a Genital Shape Difference Involved in Reproductive Isolation Between<i>Drosophila yakuba</i>and<i>Drosophila santomea</i>
Cited by: 28
Author(s): Alexandre E. Peluffo, Isabelle Nuez, Vincent Debat, Rosina Savisaar, David L. Stern, Virginie Orgogozo
Software Mentions: 4
Published: about 9 years ago

10.1002/ece3.4122

A nuclear DNA barcode for eastern North American oaks and application to a study of hybridization in an Arboretum setting
Cited by: 13
Author(s): Elisabeth Fitzek, Adline Delcamp, Erwan Guichoux, Marlene Hahn, Matthew S. Lobdell, Andrew L. Hipp
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.3699

Spatial and temporal genetic dynamics of the grasshopper <i>Oedaleus decorus</i> revealed by museum genomics
Cited by: 14
Author(s): Sarah Schmid, Samuel Neuenschwander, Camille Pitteloud, Gerald Heckel, Mila Pajkovic, Raphaël Arlettaz, Nadir Alvarez
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0120410

High-Density Genetic Linkage Mapping in Turbot (Scophthalmus maximus L.) Based on SNP Markers and Major Sex- and Growth-Related Regions Detection
Cited by: 43
Author(s): Weiji Wang, Yulong Hu, Yu Ma, Liyong Xu, Jiantao Guan, Jie Kong
Software Mentions: 3
Published: almost 10 years ago

10.1038/s41598-017-14998-2

MiSNPDb: a web-based genomic resources of tropical ecology fruit mango (Mangifera indica L.) for phylogeography and varietal differentiation
Cited by: 19
Author(s): Mir Asif Iquebal, Sarika Jaiswal, Ajay Kumar Mahato, Pawan Kumar Jayaswal, U. B. Angadi, Neeraj Kumar, Nimisha Sharma, Anand Kumar Singh, Manish Srivastav, Jai Prakash, Sanjay Kumar Singh, Kasim Khan, Rupesh Kumar Mishra, Shailendra Rajan, Anju Bajpai, B. Sandhya, P. Nischita, K. V. Ravishankar, M. R. Dinesh, Anil Rai, Dinesh Kumar, Tilak Raj Sharma, Nagendra Singh
Software Mentions: 3
Published: about 7 years ago

10.1186/s12983-019-0335-8

Persistence of multiple patterns and intraspecific polymorphism in multi-species Müllerian communities of net-winged beetles
Cited by: 14
Author(s): Matěj Boček, Dominik Kusy, Michal Motyka, Ladislav Bocák
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0075670

Multiplex Microsphere Immunoassays for the Detection of IgM and IgG to Arboviral Diseases
Cited by: 40
Author(s): Alison Jane Basile, Kalanthe Horiuchi, Amanda J. Panella, Janeen Laven, Olga Kosoy, Robert S. Lanciotti, Neeraja Venkateswaran, Brad J. Biggerstaff
Software Mentions: 3
Published: about 11 years ago

10.1186/1471-2105-6-268

MiMiR: a comprehensive solution for storage, annotation and exchange of microarray data
Cited by: 20
Author(s): Mahendra Navarange, Laurence Gamé, Derek Fowler, Vihar Wadekar, H. Stanley Banks, Nicola Cooley, Fatimah Rahman, Justin Hinshelwood, Peter Broderick, Helen C. Causton
Software Mentions: 3
Published: about 19 years ago

10.1371/journal.pone.0236082

Microbial community dissimilarity for source tracking with application in forensic studies
Cited by: 8
Author(s): Kyle M. Carter, L. Meng, Qianwen Luo, Hongmei Jiang, Lingling An
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0036558

Characterising and Predicting Benthic Biodiversity for Conservation Planning in Deepwater Environments
Cited by: 26
Author(s): Piers K. Dunstan, Franziska Althaus, Alan Williams, Nicholas J. Bax
Software Mentions: 3
Published: over 12 years ago

10.1111/mec.14426

Maintaining their genetic distance: Little evidence for introgression between widely hybridizing species of <i>Geum</i> with contrasting mating systems
Cited by: 16
Author(s): Crispin Y. Jordan, Konrad Lohse, Frances Turner, Marian Thomson, Karim Gharbi, Richard A. Ennos
Software Mentions: 3
Published: about 7 years ago

10.1111/mec.13746

The ecology of an adaptive radiation of three-spined stickleback from North Uist, Scotland
Cited by: 31
Author(s): Isabel S. Magalhaes, Daniele D’Agostino, Paul A. Hohenlohe, Andrew D. C. MacColl
Software Mentions: 3
Published: over 8 years ago

10.1038/s41438-020-0241-4

A CIN-like TCP transcription factor (LsTCP4) having retrotransposon insertion associates with a shift from Salinas type to Empire type in crisphead lettuce (Lactuca sativa L.)
Cited by: 27
Author(s): Kousuke Seki, Kenji Kono, Keisuke Tanaka, Masahiro Hiraga, Hiromi Kajiya‐Kanegae, Hideo Matsumura, Yuichi Uno
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-020-71210-8

Exploring the genetic basis of fatty liver development in geese
Cited by: 3
Author(s): Yu Yang, Huiying Wang, Guangquan Li, Yi Liu, Cui Wang, Daqian He
Software Mentions: 3
Published: over 4 years ago

10.1111/eva.13231

Leveraging genomics to understand threats to migratory birds
Cited by: 4
Author(s): Brenda Larison, Alec R. Lindsay, Christen M. Bossu, Michael D. Sorenson, Jonas Kaplan, David C. Evers, James D. Paruk, Jeffrey M. DaCosta, Thomas B. Smith, Kristen Ruegg
Software Mentions: 3
Published: over 3 years ago

10.1002/advs.201900678

Modulating Activity through Defect Engineering of Tin Oxides for Electrochemical CO₂ Reduction
Cited by: 87
Author(s): Rahman Daiyan, Emma C. Lovell, Nicholas M. Bedford, Wibawa Hendra Saputera, Kuang‐Hsu Wu, Sean Lim, Jonathan Horlyck, Yun Hau Ng, Rose Amal
Software Mentions: 2
Published: over 5 years ago

10.1002/ajcp.12468

Enabling Action: Reflections upon Inclusive Participatory Research on Health with Women with Disabilities in the Philippines
Cited by: 12
Author(s): Cathy Vaughan, Liz Gill‐Atkinson, Alexandra Devine, Jerome Zayas, Raquel Ignacio, Joy Garcia, Krissy Bisda, Joy Salgado, Ma Jesusa Marco
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2105-15-82

Transient protein-protein interface prediction: datasets, features, algorithms, and the RAD-T predictor
Cited by: 42
Author(s): Calem J Bendell, Shalon Liu, Tristan Aumentado-Armstrong, Bogdan Istrate, Paul Cernek, Samuel Khan, Sergiu Picioreanu, Michael Zhao, Robert A. Murgita
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2105-7-273

Agile methods in biomedical software development: a multi-site experience report
Cited by: 57
Author(s): David W. Kane, Moses M. Hohman, Ethan Cerami, Michael McCormick, Karl F Kuhlmman, Jeff Byrd
Software Mentions: 2
Published: over 18 years ago

10.1186/s12862-017-0911-5

Genetic basis of allochronic differentiation in the fall armyworm
Cited by: 36
Author(s): Sabine Hänniger, Pascaline Dumas, Gerhard Schöfl, Steffi Gebauer-Jung, Heiko Vogel, Melanie Unbehend, David G. Heckel, Astrid T. Groot
Software Mentions: 2
Published: almost 8 years ago

10.1186/1471-2164-14-566

Mapping the sex determination locus in the Atlantic halibut (Hippoglossus hippoglossus) using RAD sequencing
Cited by: 125
Author(s): Christos Palaiokostas, Michaël Bekaert, Andrew Davie, Mairi Cowan, Münevver Oral, John B. Taggart, Karim Gharbi, Brendan McAndrew, David J. Penman, Hervé Migaud
Software Mentions: 2
Published: over 11 years ago

10.1186/s12864-017-3805-4

In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping
Cited by: 56
Author(s): P. A. M. R. Valdisser, Wendell Jacinto Pereira, Jâneo E. Almeida Filho, Bárbara S. F. Müller, G. R. C. Coelho, Ivandilson Pessoa Pinto de Menezes, João Paulo Gomes Vianna, Maria Imaculada Zucchi, Anna Cristina Lanna, Alexandre Siqueira Guedes Coelho, Jaison Pereira de Oliveira, A. da C. Moraes, C. Brondani, R. P. Vianello
Software Mentions: 2
Published: over 7 years ago

10.1186/s12916-021-01928-3

Automated detection of lung nodules and coronary artery calcium using artificial intelligence on low-dose CT scans for lung cancer screening: accuracy and prognostic value
Cited by: 47
Author(s): Jordan Chamberlin, Madison Kocher, Jeffrey Waltz, Madalyn Snoddy, Natalie Stringer, Joseph Stephenson, Pooyan Sahbaee, Puneet Sharma, Saikiran Rapaka, U. Joseph Schoepf, Andres F. Abadia, Jonathan I. Sperl, Phillip Hoelzer, Megan Mercer, Nayana R Somayaji, Gilberto Aquino, Jeremy R. Burt
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12889-017-4793-7

Prevalence and determinants of disability among adults in Malaysia: results from the National Health and Morbidity Survey (NHMS) 2015
Cited by: 20
Author(s): Noor Ani Ahmad, Noraida Mohamad Kasim, Nur Azna Mahmud, Yusniza Mohd Yusof, Salimah Othman, Ying Ying Chan, Mohamad Aznuddin Abd Razak, Mohd Apandi Yusof, Maisarah Omar, Faieza Abdul Aziz, Rasidah Jamaluddin, Norazizah Ibrahim Wong, Tahir Aris
Software Mentions: 2
Published: about 7 years ago

10.3390/biom11010056

Design, Synthesis and In Vitro Investigation of Novel Basic Celastrol Carboxamides as Bio-Inspired Leishmanicidal Agents Endowed with Inhibitory Activity against Leishmania Hsp90
Cited by: 12
Author(s): Ivan Bassanini, Silvia Parapini, Erica Elisa Ferrandi, Elena Gabriele, Donatella Taramelli, Anna Sparatore
Software Mentions: 2
Published: almost 4 years ago

10.1002/mrm.28097

Prospective GIRF‐based RF phase cycling to reduce eddy current‐induced steady‐state disruption in bSSFP imaging
Cited by: 8
Author(s): Tom Bruijnen, Bjorn Stemkens, C.A.T. Van den Berg, Rob H N Tijssen
Software Mentions: 2
Published: about 5 years ago

10.7717/peerj.2664

Whole-genome single-nucleotide polymorphism (SNP) marker discovery and association analysis with the eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) content in<i>Larimichthys crocea</i>
Cited by: 18
Author(s): Shijun Xiao, Panpan Wang, Linsong Dong, Yaguang Zhang, Zhaofang Han, Qiurong Wang, Zhiyong Wang
Software Mentions: 2
Published: about 8 years ago

10.1186/s13007-016-0139-1

Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants
Cited by: 63
Author(s): Guoqian Yang, Yunmei Chen, Jinpeng Wang, Cen Guo, Lei Zhao, Xiaoyan Wang, Ying Guo, Li Li, Li D, Zhenhua Guo
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pgen.1008013

Identification of the master sex determining gene in Northern pike (Esox lucius) reveals restricted sex chromosome differentiation
Cited by: 101
Author(s): Qiaowei Pan, Romain Féron, Ayaka Yano, René Guyomard, Elodie Jouanno, Estelle Vigouroux, Ming Wen, Jean-Mickaël Busnel, Julien Bobe, Jean-Paul Concordet, Hugues Parrinello, Laurent Journot, Christophe Klopp, Jérôme Lluch, Céline Roques, John H. Postlethwait, Manfred Schartl, Amaury Herpin, Yann Guiguen
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0229973

Real word evidence on rituximab utilization: Combining administrative and hospital-pharmacy data
Cited by: 4
Author(s): Giuseppe Roberto, Andrea Spini, Claudia Bartolini, Valentino Moscatelli, Alessandro Barchielli, Davide Paoletti, Silvano Giorgi, Alberto Fabbri, Monica Bocchia, Sandra Donnini, Rosa Gini, Marina Ziche
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0254417

Not discussed: Inequalities in narrative text data for suicide deaths in the National Violent Death Reporting System
Cited by: 6
Author(s): Briana Mezuk, Viktoryia Kalesnikava, Jenni Kim, Tomohiro M. Ko, C L Collins
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0018561

Local De Novo Assembly of RAD Paired-End Contigs Using Short Sequencing Reads
Cited by: 194
Author(s): Paul D. Etter, Jessica L. Preston, Susan Bassham, William A. Cresko, Eric A. Johnson
Software Mentions: 2
Published: over 13 years ago

10.1002/ece3.2047

Whole‐genome sequencing reveals small genomic regions of introgression in an introduced crater lake population of threespine stickleback
Cited by: 19
Author(s): Kohta Yoshida, Ryutaro Miyagi, Seiichi Mori, Aya Takahashi, Takashi Makino, Atsushi Toyoda, Asao Fujiyama, Jun Kitano
Software Mentions: 2
Published: almost 9 years ago

10.1002/ece3.3065

Evaluating hybridization capture with <scp>RAD</scp> probes as a tool for museum genomics with historical bird specimens
Cited by: 33
Author(s): Ethan Linck, Zachary R Hanna, Anna B. Sellas, John P. Dumbacher
Software Mentions: 2
Published: over 7 years ago

10.1002/ece3.1366

Assessing the phylogeographic history of the montane caddisfly<i>Thremma gallicum</i>using mitochondrial and restriction-site-associated DNA (RAD) markers
Cited by: 24
Author(s): Jan‐Niklas Macher, Andrey Rozenberg, Steffen U. Pauls, Ralph Tollrian, R. Steiten Wagner, Florian Leese
Software Mentions: 2
Published: almost 10 years ago

10.1002/ece3.6710

Miocene diversification of a golden‐thread nanmu tree species (<i>Phoebe zhennan</i>, Lauraceae) around the Sichuan Basin shaped by the East Asian monsoon
Cited by: 17
Author(s): Jianhua Xiao, Ding Xin, Lang Li, Hui Ma, Xiuqin Ci, Marlien van der Merwe, John G. Conran, Jie Li
Software Mentions: 2
Published: over 4 years ago

10.1093/g3journal/jkab267

A candidate chromosome inversion in Arctic charr (<i>Salvelinus alpinus</i>) identified by population genetic analysis techniques
Cited by: 4
Author(s): Matthew C. Hale, Matthew A. Campbell, Garrett J. McKinney
Software Mentions: 2
Published: over 3 years ago

10.34133/2019/5373785

Kinetics of the Toluene Reaction with OH Radical
Cited by: 14
Author(s): Rui Ming Zhang, Donald G. Truhlar, Xuefei Xu
Software Mentions: 2
Published: almost 6 years ago

10.1111/raq.12193

Applications of genotyping by sequencing in aquaculture breeding and genetics
Cited by: 170
Author(s): Diego Robledo, Christos Palaiokostas, Luca Bargelloni, Paulino Martı́nez, Ross D. Houston
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-021-87237-4

Genome survey and high-resolution genetic map provide valuable genetic resources for Fenneropenaeus chinensis
Cited by: 3
Author(s): Xianhong Meng, Qiang Fu, Sheng Luan, Kun Luo, Juan Sui, Jie Kong
Software Mentions: 2
Published: over 3 years ago

10.1155/2014/639142

RSSI-Based Smooth Localization for Indoor Environment
Cited by: 6
Author(s): Yujian Wang, Bin Zhao, Zhaohui Jiang
Software Mentions: 2
Published: almost 11 years ago

10.1186/1756-6606-7-40

Metabotropic glutamate receptor 5 knockout reduces cognitive impairment and pathogenesis in a mouse model of Alzheimer's disease
Cited by: 102
Author(s): Alison B. Hamilton, Jessica L. Esseltine, Rebecca A. DeVries, Sean P. Cregan, Stephen S. G. Ferguson
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0096417

Reassessment of QTLs for Late Blight Resistance in the Tomato Accession L3708 Using a Restriction Site Associated DNA (RAD) Linkage Map and Highly Aggressive Isolates of Phytophthora infestans
Cited by: 35
Author(s): Ailin Chen, Chu-Yin Liu, Chien‐Hua Chen, Jaw‐Fen Wang, Chien-Chang Liao, Chia‐Hui Chang, Mong-Hsun Tsai, Kae-Kang Hwu, Kai-Yi Chen
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0224473

Genome-wide SNP analyses reveal population structure of Portunus pelagicus along Vietnam coastline
Cited by: 9
Author(s): Binh T. Dang, Muhammad Arifur Rahman, Sang Tran, Henrik Glenner
Software Mentions: 1
Published: about 5 years ago

10.3390/ma14164604

Modeling Superconducting Critical Temperature of 122-Iron-Based Pnictide Intermetallic Superconductor Using a Hybrid Intelligent Computational Method
Cited by: 5
Author(s): Oluwatobi Akomolafe, Taoreed O. Owolabi, Mohd Amiruddin Abd Rahman, Mohd Mustafa Awang Kechik, Mohd Najib Mohd Yasin, Miloud Souiyah
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0033394

Inferring Phylogenies from RAD Sequence Data
Cited by: 276
Author(s): Benjamin E. R. Rubin, Richard H. Ree, Corrie S. Moreau
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0236343

High accuracy of pooled DNA genotyping by 2b-RAD sequencing in the Pacific white shrimp, Litopenaeus vannamei
Cited by: 1
Author(s): Juan Sui, Sheng Luan, Peng Dai, Qiang Fu, Xianhong Meng, Kun Luo, Baoxiang Cao, Jie Kong
Software Mentions: 1
Published: over 4 years ago

10.1186/1472-6874-11-44

Molecular subtype analysis determines the association of advanced breast cancer in Egypt with favorable biology
Cited by: 52
Author(s): Bodour Salhia, Coya Tapia, Elia A. Ishak, Salwa Gaber, Bree D. Berghuis, Khateeb Hyder Hussain, Rachelle A. DuQuette, James H. Resau, John D. Carpten
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0143404

Comparison of Multiparametric MRI Scoring Systems and the Impact on Cancer Detection in Patients Undergoing MR US Fusion Guided Prostate Biopsies
Cited by: 42
Author(s): Ardeshir R. Rastinehad, Nikhil Waingankar, Barış Türkbey, Oksana Yaskiv, Anna Marie Sonstegard, Mathew Fakhoury, Carl A. Olsson, David Siegel, Peter L. Choyke, Eran Ben‐Levi, Robert Villani
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-2458-14-S1-P17

Development of UNU-Casemix Grouper standard integration tool kit for hospital information system (HIS) in selected hospitals in Malaysia and Indonesia
Cited by: 0
Author(s): Syed M. Aljunid, Syed Mohamed Aljunid, Zafar Ahmed, Hasrul Reeza Mustaffa
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0139840

Phylogeny of Morella rubra and Its Relatives (Myricaceae) and Genetic Resources of Chinese Bayberry Using RAD Sequencing
Cited by: 12
Author(s): Luxian Liu, Xinjie Jin, Nan Chen, Xian Li, Pan Li, Chengxin Fu
Software Mentions: 1
Published: about 9 years ago

10.1523/ENEURO.0160-19.2019

Rodent Activity Detector (RAD), an Open Source Device for Measuring Activity in Rodent Home Cages
Cited by: 16
Author(s): Bridget A. Matikainen‐Ankney, Marcial Garmendia‐Cedillos, Mohamed A. Ali, Jonathan Krynitsky, Ghadi Salem, Nanami L. Miyazaki, Tom Pohida, Alexxai V. Kravitz
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0175038

Access to percutaneous transluminal coronary angioplasty and 30-day mortality in patients with incident STEMI: Differentials by educational level and gender over 11 years
Cited by: 5
Author(s): Laura Cacciani, Nera Agabiti, Anna Maria Bargagli, Marina Davoli
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0158336

The Tradeoff between Travel Time from Home to Hospital and Door to Balloon Time in Determining Mortality among STEMI Patients Undergoing PCI
Cited by: 13
Author(s): Riccardo Di Domenicantonio, Giovanna Cappai, Paolo Sciattella, Valeria Belleudi, Mirko Di Martino, Nera Agabiti, Francesca Mataloni, Roberto Ricci, Carlo A. Perucci, Marina Davoli, Danilo Fusco
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0109650

The Association between Circulating MicroRNA Levels and Coronary Endothelial Function
Cited by: 33
Author(s): R. Jay Widmer, Woo Young Chung, Joerg Herrmann, Kyra L. Jordan, Lilach O. Lerman, Amir Lerman
Software Mentions: 1
Published: about 10 years ago

10.3390/s21062005

Structural Damage Identification of Composite Rotors Based on Fully Connected Neural Networks and Convolutional Neural Networks
Cited by: 7
Author(s): Veronika Scholz, Peter Winkler, Andreas Hornig, Μaik Gude, Angelos Filippatos
Software Mentions: 1
Published: almost 4 years ago

10.1186/1749-8546-7-9

Inquiry diagnosis of coronary heart disease in Chinese medicine based on symptom-syndrome interactions
Cited by: 27
Author(s): Guozheng Li, Sheng Sun, Mingyu You, Yalei Wang, Guoping Li
Software Mentions: 1
Published: over 12 years ago

10.1002/ece3.7342

Colonization process determines species diversity via competitive quasi‐exclusion
Cited by: 3
Author(s): Atsushi Yamauchi, Koichi Ito, Shota Shibasaki
Software Mentions: 1
Published: almost 4 years ago

10.1177/1073191118797422

Development and Examination of the Reactive Attachment Disorder and Disinhibited Social Engagement Disorder Assessment Interview
Cited by: 17
Author(s): Stine Lehmann, Sébastien Monette, Helen L. Egger, Kyrre Breivik, David Young, Claire Davidson, Helen Minnis
Software Mentions: 1
Published: over 6 years ago

10.1007/s00122-016-2736-9

A highly robust and optimized sequence-based approach for genetic polymorphism discovery and genotyping in large plant populations
Cited by: 8
Author(s): Ning Jiang, Fengjun Zhang, Jang‐Yen Wu, Yue Chen, Xiaohua Hu, Fang Ou, Lindsey Leach, Di Wang, Zewei Luo
Software Mentions: 1
Published: over 8 years ago

10.1002/ece3.2617

Geographic structure in the Southern Ocean circumpolar brittle star <i>Ophionotus victoriae</i> (Ophiuridae) revealed from mt <scp>DNA</scp> and single‐nucleotide polymorphism data
Cited by: 31
Author(s): Matthew P. Galaska, Chester J. Sands, Scott R. Santos, Andrew R. Mahon, Kenneth M. Halanych
Software Mentions: 1
Published: about 8 years ago

10.3390/tomography7010007

Respiratory Motion Mitigation and Repeatability of Two Diffusion-Weighted MRI Methods Applied to a Murine Model of Spontaneous Pancreatic Cancer
Cited by: 3
Author(s): Jianbo Cao, Hee Kwon Song, Han Yang, Víctor R Castillo, Jinbo Chen, Cynthia Clendenin, Mark Rosen, Rong Zhou, Stephen Pickup
Software Mentions: 1
Published: almost 4 years ago

10.1186/1471-2458-14-900

Field-testing of the rapid assessment of disability questionnaire
Cited by: 22
Author(s): Manjula Marella, Ljoudmila Busija, Amirul Islam, Alexandra Devine, Kathy Fotis, Sally Baker, Beth Sprunt, Tanya J. Edmonds, Nafisa Lira Huq, Anaseini Cama, Jill Keeffe
Software Mentions: 1
Published: over 10 years ago

10.1002/ece3.2844

Population genomics meet Lagrangian simulations: Oceanographic patterns and long larval duration ensure connectivity among<i>Paracentrotus lividus</i>populations in the Adriatic and Ionian seas
Cited by: 31
Author(s): Marta Paterno, Marcello Schiavina, Giorgio Aglieri, Jamila Ben Souissi, Elisa Boscari, Renato Casagrandi, Aurore Chassanite, Mariachiara Chiantore, Leonardo Congiu, Giuseppe Guarnieri, Claudia Kruschel, Vesna Mačić, Ilaria A. M. Marino, Chiara Papetti, Tomaso Patarnello, Lorenzo Zane, Paco Melià
Software Mentions: 1
Published: almost 8 years ago

10.1128/mBio.02726-20

Estimation of Full-Length TprK Diversity in Treponema pallidum subsp. <i>pallidum</i>
Cited by: 17
Author(s): Amin Addetia, Michelle J. Lin, Quynh Phung, Hong Xie, Meei Li Huang, Giulia Ciccarese, Ivano Dal Conte, Marco Cusini, Francesco Drago, Lorenzo Giacani, Alexander L. Greninger
Software Mentions: 1
Published: about 4 years ago

10.1186/s12870-015-0604-4

Construction of a dense genetic linkage map and mapping quantitative trait loci for economic traits of a doubled haploid population of Pyropia haitanensis (Bangiales, Rhodophyta)
Cited by: 25
Author(s): Yan Xu, Long Huang, Dehua Ji, Changsheng Chen, Hongkun Zheng, Chaotian Xie
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2288-12-142

Construct validity of 2 measures to assess reasons for antipsychotic discontinuation and continuation from patients’ and clinicians’ perspectives in a clinical trial
Cited by: 4
Author(s): Douglas E. Faries, Haya Ascher-Svanum, Glenn Phillips, Allen W. Nyhuis, Tomoko Sugihara, Virginia L. Stauffer, Bruce J. Kinon
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-15-1098

Genomic resources for the endangered Hawaiian honeycreepers
Cited by: 21
Author(s): Taylor Callicrate, Rebecca B. Dikow, James W. Thomas, James C. Mullikin, Erich D. Jarvis, Robert C. Fleischer
Software Mentions: 1
Published: about 10 years ago

10.1111/eva.12288

Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era
Cited by: 214
Author(s): Pierre‐Alexandre Gagnaire, Thomas Broquet, Didier Aurelle, Frédérique Viard, Amira Souissi, François Bonhomme, Sophie Arnaud‐Haond, Nicolas Bierne
Software Mentions: 1
Published: over 9 years ago

10.3389/fpls.2014.00484

Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding
Cited by: 429
Author(s): Jiang-Feng He, Xiaoqing Zhao, André Laroche, Zhen-Xiang Lu, HongKui Liu, Ziqin Li
Software Mentions: 1
Published: about 10 years ago

10.3389/fpls.2018.01003

Genotypic and Environmental Effects on the Volatile Chemotype of Valeriana jatamansi Jones
Cited by: 20
Author(s): Xingchao He, Shiyu Wang, Jiayi Shi, Zhong-Lin Sun, Zhentian Lei, Zili Yin, Qian Zhou, Huiru Tang, Hui Xie
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-15-104

An evaluation of genotyping by sequencing (GBS) to map the Breviaristatum-e (ari-e) locus in cultivated barley
Cited by: 120
Author(s): Hui Liu, Micha Bayer, Arnis Druka, Joanne Russell, Christine A. Hackett, Jesse Poland, Luke Ramsay, Pete E. Hedley, Robbie Waugh
Software Mentions: 1
Published: almost 11 years ago

10.1186/1471-2164-15-1158

An SNP-based saturated genetic map and QTL analysis of fruit-related traits in cucumber using specific-length amplified fragment (SLAF) sequencing
Cited by: 102
Author(s): Qingzhen Wei, Yunzhu Wang, Xiaodong Qin, Yunxia Zhang, Zhentao Zhang, Jing Wang, Ji Li, Qunfeng Lou, Jinfeng Chen
Software Mentions: 1
Published: about 10 years ago

10.1186/s12864-020-06960-w

Development and validation of a RAD-Seq target-capture based genotyping assay for routine application in advanced black tiger shrimp (Penaeus monodon) breeding programs
Cited by: 14
Author(s): Jarrod L. Guppy, David B. Jones, Shannon R. Kjeldsen, Agnès Le Port, Mehar S. Khatkar, Nicholas M. Wade, Melony J. Sellars, Eike J. Steinig, Herman W. Raadsma, Dean R. Jerry, Kyall R. Zenger
Software Mentions: 1
Published: over 4 years ago

10.1534/g3.120.401485

Chromonomer: A Tool Set for Repairing and Enhancing Assembled Genomes Through Integration of Genetic Maps and Conserved Synteny
Cited by: 34
Author(s): Julian M. Catchen, Angel Amores, Susan Bassham
Software Mentions: 1
Published: about 4 years ago

10.1155/2021/6649591

Computer-Aided Diagnosis of COVID-19 CT Scans Based on Spatiotemporal Information Fusion
Cited by: 8
Author(s): Tianyi Li, Wei Wei, Lidan Cheng, Shengjie Zhao, Chuanjun Xu, Xia Zhang, Yi Zeng, Jin Gu
Software Mentions: 1
Published: almost 4 years ago

10.3390/genes10100793

An SNP-Based Genetic Map and QTL Mapping for Growth Traits in the Red-Spotted Grouper (Epinephelus akaara)
Cited by: 10
Author(s): Xiang Wang, Shoujia Jiang, Li Zheng, Ling Xiao, Xinhui Zhang, Dengdong Wang, Shuisheng Li, Qiong Shi, Shuiqing Wu, Haoran Lin, Xinxin You, Yong Zhang
Software Mentions: 1
Published: about 5 years ago

10.1186/1744-8603-6-18

Turning a blind eye: the mobilization of radiology services in resource-poor regions
Cited by: 94
Author(s): Duncan Smith-Rohrberg Maru, Ryan Schwarz, Jason R Andrews, Sanjay Basu, Aditya Sharma, Christopher L. Moore
Software Mentions: 1
Published: almost 15 years ago

10.1186/1471-2164-15-956

An improved 2b-RAD approach (I2b-RAD) offering genotyping tested by a rice (Oryza sativa L.) F2 population
Cited by: 26
Author(s): Yu Guo, Hui Yuan, Dongming Fang, Lianbo Song, Yan Liu, Yong Liu, Lian Wu, Jianping Yu, Zichao Li, Xun Xu, Hongliang Zhang
Software Mentions: 1
Published: about 10 years ago

10.3390/insects10090295

Genomic and Mitochondrial Data Identify Different Species Boundaries in Aposematically Polymorphic Eniclases Net-Winged Beetles (Coleoptera: Lycidae)
Cited by: 5
Author(s): Matěj Boček, Michal Motyka, Dominik Kusy, Ladislav Bocäk
Software Mentions: 1
Published: over 5 years ago

10.1002/acm2.12692

Variation in target volume and centroid position due to breath holding during four‐dimensional computed tomography scanning: A phantom study
Cited by: 2
Author(s): Yuta Miyamae, Mami Akimoto, Makoto Sasaki, Takahiro Fujimoto, Shinsuke Yano, Mitsuhiro Nakamura
Software Mentions: 1
Published: over 5 years ago

10.1002/acm2.12842

Patient motion tracking for non‐isocentric and non‐coplanar treatments via fixed frame‐of‐reference 3D camera
Cited by: 1
Author(s): Sergey Gasparyan, Kyle Ko, Lawrie Skinner, Ryan B. Ko, Billy W. Loo, B Fahimian, Amy S. Yu
Software Mentions: 1
Published: almost 5 years ago

10.1002/acm2.13170

Quantifying false positional corrections due to facial motion using SGRT with open‐face Masks
Cited by: 5
Author(s): Victoria Bry, Anna Laura Licon, James McCulloch, Neil Kirby, Pamela Myers, Daniel Saenz, Sotirios Stathakis, Niko Papanikolaou, Karl Rasmussen
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12963-016-0096-y

Rapid assessment of disability in the Philippines: understanding prevalence, well-being, and access to the community for people with disabilities to inform the W-DARE project
Cited by: 26
Author(s): Manjula Marella, Alexandra Devine, Graeme Ferdinand Armecin, Jerome Zayas, Ma Jesusa Marco, Cathy Vaughan
Software Mentions: 1
Published: over 8 years ago

10.1098/rsos.150565

A novel method of microsatellite genotyping-by-sequencing using individual combinatorial barcoding
Cited by: 55
Author(s): Salla Vartia, José Luis Villanueva‐Cañas, John A. Finarelli, Edward D. Farrell, Patrick C. Collins, Graham M. Hughes, Jeanette E. L. Carlsson, David T. Gauthier, Philip McGinnity, T. Cross, Ross Fitzgerald, Luca Mirimin, Fiona Crispie, Paul D. Cotter, Jens Carlsson
Software Mentions: 1
Published: almost 9 years ago

10.1098/rsos.181085

Scaling the phase-planes of social dilemma strengths shows game-class changes in the five rules governing the evolution of cooperation
Cited by: 162
Author(s): Hiromu Ito, Jun Tanimoto
Software Mentions: 1
Published: about 6 years ago

10.1098/rsos.200943

Correction to ‘Scaling the phase-planes of social dilemma strengths shows game-class changes in the five rules governing the evolution of cooperation’
Cited by: 1
Author(s): Hiromu Ito, Jun Tanimoto
Software Mentions: 1
Published: over 4 years ago

10.1155/2012/360598

Local Assemblies of Paired-End Reduced Representation Libraries Sequenced with the Illumina Genome Analyzer in Maize
Cited by: 5
Author(s): Stéphane Deschamps, Kishore Nannapaneni, Yun Zhang, Kevin Hayes
Software Mentions: 1
Published: about 12 years ago

10.1186/s12931-019-1046-6

A prospective multicentre study testing the diagnostic accuracy of an automated cough sound centred analytic system for the identification of common respiratory disorders in children
Cited by: 89
Author(s): Paul Porter, Udantha R. Abeyratne, Vinayak Swarnkar, Jamie Tan, Ti Wan Ng, Joanna Brisbane, Deirdre Speldewinde, Jennifer Choveaux, Roneel V. Sharan, Keegan Kosasih, Phillip Della
Software Mentions: 1
Published: over 5 years ago

10.2196/mededu.9365

Consensus on Quality Indicators of Postgraduate Medical E-Learning: Delphi Study
Cited by: 13
Author(s): Robert de Leeuw, Kieran Walsh, Michiel Westerman, Fedde Scheele
Software Mentions: 1
Published: over 6 years ago

10.1038/sdata.2018.251

A dataset of clinically generated visual questions and answers about radiology images
Cited by: 88
Author(s): Jason J. Lau, Soumya Gayen, Asma Ben Abacha, Dina Demner‐Fushman
Software Mentions: 1
Published: about 6 years ago