Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: QTLRel

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/QTLRel

Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
29 versions
Latest release: over 1 year ago
678 downloads last month

Papers Mentioning QTLRel 16

Improved detection of gene-microbe interactions in the mouse skin microbiota using high-resolution QTL mapping of 16S rRNA transcripts
Cited by: 29
Author(s): Meriem Belheouane, Yask Gupta, Sven Künzel, Saleh M. Ibrahim, John F. Baines
Software Mentions: 6
Published: over 7 years ago

10.1534/genetics.118.301589

Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
Cited by: 17
Author(s): Pip Wilson, Jared Streich, Kevin Murray, Steven R. Eichten, Riyan Cheng, Nicola Aitken, Kurt A. Spokas, Norman Warthmann, Sean P. Gordon, Accession Contributors, John P. Vogel, Justin O. Borevitz
Software Mentions: 4
Published: almost 6 years ago

10.1534/g3.117.041426

The Beavis Effect in Next-Generation Mapping Panels in <i>Drosophila melanogaster</i>
Cited by: 47
Author(s): Elizabeth G. King, Anthony D. Long
Software Mentions: 4
Published: over 7 years ago

10.1007/s00122-017-2904-6

Epistatic determinism of durum wheat resistance to the wheat spindle streak mosaic virus
Cited by: 6
Author(s): Yan Holtz, Michel Bonnefoy, Véronique Viader, Morgane Ardisson, Nicolas O. Rode, Gérard Poux, Pierre Roumet, Véronique Marie-Jeanne, Vincent Ranwez, Sylvain Santoni, David Gouache, Jacques David
Software Mentions: 3
Published: over 7 years ago

10.1534/g3.114.013748

Quantitative Trait Locus Mapping Methods for Diversity Outbred Mice
Cited by: 183
Author(s): Daniel M. Gatti, Karen L. Svenson, Andrey A. Shabalin, Long Yang Wu, William Valdar, Petr Šimeček, Neal Goodwin, Riyan Cheng, Daniel Pomp, Abraham A. Palmer, Elissa J. Chesler, Karl W. Broman, Gary A. Churchill
Software Mentions: 3
Published: about 10 years ago

10.3390/genes12091368

The Genetic Architecture of a Congenital Heart Defect Is Related to Its Fitness Cost
Cited by: 1
Author(s): Ehiole Akhirome, Suk D. Regmi, Rachel A. Magnan, Nelson Ugwu, Yidan Qin, Claire E. Schulkey, James M. Cheverud, Patrick Y. Jay
Software Mentions: 2
Published: about 3 years ago

10.1534/g3.113.007948

Practical Considerations Regarding the Use of Genotype and Pedigree Data to Model Relatedness in the Context of Genome-Wide Association Studies
Cited by: 55
Author(s): Riyan Cheng, Clarissa C. Parker, Mark Abney, Abraham A. Palmer
Software Mentions: 1
Published: about 11 years ago

10.1186/1741-7007-10-108

Evolution of an adaptive behavior and its sensory receptors promotes eye regression in blind cavefish
Cited by: 133
Author(s): Masato Yoshizawa, Yoshiyuki Yamamoto, Kelly E. O’Quin, William R. Jeffery
Software Mentions: 1
Published: almost 12 years ago

10.1007/s00335-014-9508-0

Precise genetic mapping and integrative bioinformatics in Diversity Outbred mice reveals Hydin as a novel pain gene
Cited by: 54
Author(s): Jill M Recla, Raymond F. Robledo, Daniel M. Gatti, Carol J. Bult, Gary A. Churchill, Elissa J. Chesler
Software Mentions: 1
Published: over 10 years ago

10.1534/g3.119.400763

Genome-Wide Association Study in Two Cohorts from a Multi-generational Mouse Advanced Intercross Line Highlights the Difficulty of Replication Due to Study-Specific Heterogeneity
Cited by: 8
Author(s): Xinzhu Zhou, Celine L. St. Pierre, Natalia M. Gonzales, Jennifer Zou, Riyan Cheng, Apurva S. Chitre, Greta Sokoloff, Abraham A. Palmer
Software Mentions: 1
Published: over 4 years ago

10.1111/gbb.12029

High‐precision genetic mapping of behavioral traits in the diversity outbred mouse population
Cited by: 106
Author(s): Ryan W. Logan, Raymond F. Robledo, Jill M Recla, Vivek M. Philip, Jason A. Bubier, Jeremy J. Jay, Chris Harwood, Troy Wilcox, Daniel M. Gatti, Carol J. Bult, Gary A. Churchill, Elissa J. Chesler
Software Mentions: 1
Published: over 11 years ago

10.1186/1471-2156-12-66

QTLRel: an R Package for Genome-wide Association Studies in which Relatedness is a Concern
Cited by: 72
Author(s): Riyan Cheng, Mark Abney, Abraham A. Palmer, Andrew D. Skol
Software Mentions: 1
Published: over 13 years ago

10.1186/s13059-014-0552-6

Host genetics and diet, but not immunoglobulin A expression, converge to shape compositional features of the gut microbiome in an advanced intercross population of mice
Cited by: 120
Author(s): Larry J. Leamy, Scott A. Kelly, Joseph Nietfeldt, Ryan Legge, Fangrui Ma, Kunjie Hua, Rohita Sinha, Daniel A. Peterson, Jens Walter, Andrew K. Benson, Daniel Pomp
Software Mentions: 1
Published: almost 10 years ago

10.1186/2044-5040-2-26

The superhealing MRL background improves muscular dystrophy
Cited by: 29
Author(s): Ahlke Heydemann, Kayleigh A. Swaggart, Gene Kim, Jenan Holley-Cuthrell, Michele Hadhazy, Elizabeth M. McNally
Software Mentions: 1
Published: almost 12 years ago

10.14814/phy2.13561

Replication and discovery of musculoskeletal QTLs in LG/J and SM/J advanced intercross lines
Cited by: 10
Author(s): Ana I Hernández Cordero, Peter Carbonetto, Gioia Riboni Verri, Jennifer S. Gregory, David J. Vandenbergh, Joseph P. Gyekis, David A. Blizard, Arimantas Lionikas
Software Mentions: 1
Published: almost 7 years ago

10.7717/peerj.392

Quantitative trait loci for energy balance traits in an advanced intercross line derived from mice divergently selected for heat loss
Cited by: 3
Author(s): Larry J. Leamy, Kari Elo, Marie Vejrup Nielsen, Stephanie R. Thorn, William Valdar, Daniel Pomp
Software Mentions: 1
Published: over 10 years ago