Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: PST
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/PST
Probabilistic Suffix Trees and Variable Length Markov Chains
8 versions
Latest release: almost 8 years ago
168 downloads last month
Papers Mentioning PST 45
10.1186/s12864-020-07009-8
Bivalent genes that undergo transcriptional switching identify networks of key regulators of embryonic stem cell differentiationCited by: 6
Author(s): Ah-Jung Jeon, Greg Tucker‐Kellogg
Software Mentions: 4
Published: about 4 years ago
10.1186/s12862-019-1392-5
Population genomics of rapid evolution in natural populations: polygenic selection in response to power station thermal effluentsCited by: 59
Author(s): David I. Dayan, Xiao Du, Tara Zeynep Baris, Dominique Wagner, Douglas L. Crawford, Marjorie F. Oleksiak
Software Mentions: 4
Published: over 5 years ago
10.1002/lrh2.10214
The European medical information framework: A novel ecosystem for sharing healthcare data across EuropeCited by: 18
Author(s): Simon Lovestone
Software Mentions: 3
Published: almost 5 years ago
10.1186/1471-2105-10-418
TransportTP: A two-phase classification approach for membrane transporter prediction and characterizationCited by: 57
Author(s): Haiquan Li, Vagner A. Benedito, Michael K. Udvardi, Patrick Xuechun Zhao
Software Mentions: 3
Published: almost 15 years ago
10.2196/resprot.1925
Electronic Problem-Solving Treatment: Description and Pilot Study of an Interactive Media Treatment for DepressionCited by: 18
Author(s): James A. Cartreine, Steven E. Locke, Jay C. Buckey, Luis Sandoval, Mark T. Hegel
Software Mentions: 3
Published: about 12 years ago
10.1002/ece3.1324
Potential for adaptive evolution at species range margins: contrasting interactions between red coral populations and their environment in a changing oceanCited by: 33
Author(s): J. B. Ledoux, Didier Aurelle, Nathaniel Bensoussan, Christian Marschal, Jean‐Pierre Féral, Joaquim Garrabou
Software Mentions: 2
Published: almost 10 years ago
10.3390/toxins11020113
Mutagenesis of α-Conotoxins for Enhancing Activity and Selectivity for Nicotinic Acetylcholine ReceptorsCited by: 18
Author(s): Matthew Turner, Leanna A. Marquart, P.D. Phillips, Owen M. McDougal
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12888-021-03260-9
Problem-solving training as an active ingredient of treatment for youth depression: a scoping review and exploratory meta-analysisCited by: 7
Author(s): Karolin Rose Krause, Darren Courtney, Benjamin Chan, Sarah Bonato, Madison Aitken, Jacqueline Relihan, Matthew Prebeg, Karleigh Darnay, Lisa D. Hawke, Priya Watson, Péter Szatmári
Software Mentions: 2
Published: about 3 years ago
10.3390/molecules23123358
Photochemical Reactions in Dialdehyde StarchCited by: 20
Author(s): Marta Ziegler-Borowska, Katarzyna Węgrzynowska-Drzymalska, Dorota Chełminiak-Dudkiewicz, Jolanta Kowalonek, Halina Kaczmarek
Software Mentions: 1
Published: almost 6 years ago
10.1097/pq9.0000000000000449
The Child Health PSO at 10 Years: An Emerging Learning NetworkCited by: 0
Author(s): Fiona H. Levy, Katherine A Conrad, Carol A. Kemper, Michaeleen Green
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0146277
Improved Power System Stability Using Backtracking Search Algorithm for Coordination Design of PSS and TCSC Damping ControllerCited by: 9
Author(s): Naz Niamul Islam, M. A. Hannan, Azah Mohamed, Hussain Shareef
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0084338
Consequences of Cathodal Stimulation for Behavior: When Does It Help and When Does It Hurt Performance?Cited by: 64
Author(s): Nazbanou Nozari, Kristina Woodard, Sharon L. Thompson-Schill
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0212277
Valuing individual characteristics and the multifunctionality of urban green spaces: The integration of sociotope mapping and hedonic pricingCited by: 31
Author(s): Piotr Czembrowski, Edyta Łaszkiewicz, Jakub Kronenberg, Gustav Engström, Erik Andersson
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0129770
Neuroelectric Correlates of Pragmatic Emotional Incongruence Processing: Empathy MattersCited by: 12
Author(s): Dorian Dozolme, Éric Brunet-Gouet, Christine Passerieux, Michel-Ange Amorim
Software Mentions: 1
Published: over 9 years ago
10.3389/fnhum.2018.00381
Decoding Voluntary Movement of Single Hand Based on Analysis of Brain Connectivity by Using EEG SignalsCited by: 25
Author(s): Ting Li, Tao Xue, Baozeng Wang, Jinhua Zhang
Software Mentions: 1
Published: about 6 years ago
10.3389/fninf.2018.00073
Mapping the Human Brain in Frequency Band Analysis of Brain Cortex Electroencephalographic Activity for Selected Psychiatric DisordersCited by: 20
Author(s): Grzegorz M. Wójcik, Jolanta Masiak, Andrzej Kawiak, Łukasz Kwaśniewicz, Piotr Schneider, Nikodem Polak, Anna Gajos-Balińska
Software Mentions: 1
Published: about 6 years ago
10.3389/fninf.2019.00073
Analysis of Decision-Making Process Using Methods of Quantitative Electroencephalography and Machine Learning ToolsCited by: 19
Author(s): Grzegorz M. Wójcik, Jolanta Masiak, Andrzej Kawiak, Łukasz Kwaśniewicz, Piotr Schneider, Filip Postepski, Anna Gajos-Balińska
Software Mentions: 1
Published: almost 5 years ago
10.3389/fpsyg.2019.01580
Why Smoggy Days Suppress Our Mood: Automatic Association Between Clarity and ValenceCited by: 0
Author(s): Yiguang Liu, Jun Yin, Junying Liang
Software Mentions: 1
Published: over 5 years ago
10.3389/fpsyg.2021.662050
Pragmatic Prediction in the Processing of Referring Expressions Containing Scalar QuantifiersCited by: 1
Author(s): Vinicius Macuch Silva, Michael Franke
Software Mentions: 1
Published: about 3 years ago
10.1186/s12955-021-01798-6
The influences of the environment and information on the complications of diabetes on patient outcomesCited by: 1
Author(s): Kazuoki Inoue, Jun Watanabe, Eiichi Kakehi
Software Mentions: 1
Published: over 3 years ago
10.1186/s12955-021-01831-8
Reply to: The influences of the environment and information on the complications of diabetes on patient outcomesCited by: 0
Author(s): Zeynep Bahadır Ağce, Gamze Ekici
Software Mentions: 1
Published: about 3 years ago
10.5334/joc.134
A Future of Words: Language and the Challenge of Abstract ConceptsCited by: 38
Author(s): Anna M. Borghi
Software Mentions: 1
Published: almost 5 years ago
10.1038/srep14333
Dormant phages of Helicobacter pylori reveal distinct populations in EuropeCited by: 38
Author(s): Filipa F. Vale, Jamuna Vadivelu, Mónica Oleastro, Sébastien Breurec, Lars Engstrand, Tsachi-Tsadok Perets, Françis Mégraud, Philippe Lehours
Software Mentions: 1
Published: about 9 years ago
10.1038/srep36848
High-Affinity α-Conotoxin PnIA Analogs Designed on the Basis of the Protein Surface Topography MethodCited by: 23
Author(s): Igor E. Kasheverov, Anton O. Chugunov, Denis S. Kudryavtsev, Igor A. Ivanov, Maxim N. Zhmak, Irina V. Shelukhina, Ekaterina N. Spirova, Valentin М. Tabakmakher, Elena Zelepuga, Roman G. Efremov, Victor I. Tsetlin
Software Mentions: 1
Published: about 8 years ago
10.1038/srep44136
Humans Conceptualize Victory and Defeat in Body SizeCited by: 3
Author(s): Wenjun Yu, Zhe Sun, Jifan Zhou, Chaoer Xu, Mowei Shen
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-018-28322-z
Estimating missing values in China’s official socioeconomic statistics using progressive spatiotemporal Bayesian hierarchical modelingCited by: 10
Author(s): Chao Song, Xiu Xian Yang, Xun Shi, Yanchen Bo, Jinfeng Wang
Software Mentions: 1
Published: over 6 years ago
10.3390/s20175016
Which Visual Modality Is Important When Judging the Naturalness of the Agent (Artificial Versus Human Intelligence) Providing Recommendations in the Symbolic Consumption Context?Cited by: 2
Author(s): Kyungmi Chung, Jin Young Park, Kiwan Park, Yaeri Kim
Software Mentions: 1
Published: about 4 years ago
10.1007/s40279-015-0319-6
Psychological Determinants of Whole-Body Endurance PerformanceCited by: 179
Author(s): Alister McCormick, Carla Meijen, Samuele Maria Marcora
Software Mentions: 1
Published: over 9 years ago
10.1186/s13011-015-0018-1
Screening and concurrent brief intervention of conjoint hazardous or harmful alcohol and tobacco use in hospital out-patients in Thailand: a randomized controlled trialCited by: 12
Author(s): Supa Pengpid, Karl Peltzer, Apa Puckpinyo, Somchai Viripiromgool, Kriengsak Thamma-aphiphol, Kawinarat Suthisukhon, Dussanee Dumee, Thiprada Kongtapan
Software Mentions: 1
Published: over 9 years ago
10.1186/1745-6215-15-457
Task sharing of a psychological intervention for maternal depression in Khayelitsha, South Africa: study protocol for a randomized controlled trialCited by: 35
Author(s): Crick Lund, Marguerite Schneider, Thandi Davies, Memory Nyatsanza, Simone Honikman, Arvin Bhana, Judith K. Bass, Paul Bolton, Michael Dewey, John A. Joska, Ashraf Kagee, Landon Myer, Inge Petersen, Martin Prince, Dan J. Stein, Graham Thornicroft, Mark Tomlinson, Atalay Alem, Ezra Süsser
Software Mentions: 1
Published: about 10 years ago
10.1007/s00484-018-1591-6
Evaluation of thermal indices for their applicability in obstacle-resolving meteorology modelsCited by: 20
Author(s): Jana Fischereit, K. Heinke Schlünzen
Software Mentions: 1
Published: over 6 years ago
10.2196/16880
Association Between Electroencephalogram-Derived Sleep Measures and the Change of Emotional Status Analyzed Using Voice Patterns: Observational Pilot StudyCited by: 2
Author(s): Hirotaka Miyashita, Mitsuteru Nakamura, Akiko Kishi Svensson, Masahiro Nakamura, Shinichi Tokuno, Ung‐il Chung, Thomas Svensson
Software Mentions: 1
Published: over 4 years ago
10.5195/jmla.2020.834
Improving the translation of search strategies using the Polyglot Search Translator: a randomized controlled trialCited by: 178
Author(s): Justin Clark, Sharon Sanders, Matthew Carter, David Honeyman, Gina Cleo, Yvonne Auld, Debbie Booth, Patrick Condron, Christine Dalais, Sarah Bateup, Bronwyn Linthwaite, Nikki May, Joanne Munn, Lindy Ramsay, Kirsty Rickett, Cameron Rutter, Angela Smith, Peter Sondergeld, Margie Wallin, Mark Jones, Elaine Beller
Software Mentions: 1
Published: over 4 years ago
10.2196/15172
The Effectiveness of a Guided Internet-Based Tool for the Treatment of Depression and Anxiety in Pregnancy (MamaKits Online): Randomized Controlled TrialCited by: 34
Author(s): H Heller, Adriaan W. Hoogendoorn, Adriaan Honig, Birit F.P. Broekman, Annemieke van Straten
Software Mentions: 1
Published: over 4 years ago
10.2196/jmir.1094
Internet-Based Treatment for Adults with Depressive Symptoms: Randomized Controlled TrialCited by: 222
Author(s): Lisanne Warmerdam, Annemieke van Straten, Jos W. R. Twisk, Heleen Riper, Pim Cuijpers
Software Mentions: 1
Published: about 16 years ago
10.1007/s00415-019-09340-x
Screening performance of abbreviated versions of the UPSIT smell testCited by: 34
Author(s): Theresita Joseph, Stephen D. Auger, Luisa Peress, Daniel Rack, Jack Cuzick, Gavin Giovannoni, Andrew J. Lees, Anette Schrag, Alastair J. Noyce
Software Mentions: 1
Published: over 5 years ago
10.5709/acp-0191-7
Interplay Between the Object and Its Symbol: The Size-Congruency EffectCited by: 8
Author(s): Mowei Shen, Jiushu Xie, Wenjuan Liu, Wenjie Lin, Zhuoming Chen, Fernando Marmolejo‐Ramos, Ruiming Wang
Software Mentions: 1
Published: over 8 years ago
10.3390/nu12061678
Further Evidence of Benefits to Mood and Working Memory from Lipidated Curcumin in Healthy Older People: A 12-Week, Double-Blind, Placebo-Controlled, Partial Replication StudyCited by: 29
Author(s): Katherine Cox, David White, Andrew Pipingas, Kaylass Poorun, Andrew Scholey
Software Mentions: 1
Published: over 4 years ago
10.3390/antibiotics10030267
Whole-Genome Sequencing Reveals the Presence of the blaCTX-M-65 Gene in Extended-Spectrum β-Lactamase-Producing and Multi-Drug-Resistant Clones of Salmonella Serovar Infantis Isolated from Broiler Chicken Environments in the Galapagos IslandsCited by: 15
Author(s): Elton Burnett, Maria Ishida, Sofía de Janon, Sohail Naushad, Marc‐Olivier Duceppe, Ruimin Gao, Armando Jardim, Jessica C. Chen, Kaitlin A. Tagg, Dele Ogunremi, Christian Vinueza-Burgos
Software Mentions: 1
Published: over 3 years ago
10.1186/1471-2164-12-434
Analysis of human meiotic recombination events with a parent-sibling tracing approachCited by: 11
Author(s): Yun‐Shien Lee, Angel Chao, Chun-Houh Chen, T. L. Chou, Shih-Yee Mimi Wang, Tzu‐Hao Wang
Software Mentions: 1
Published: about 13 years ago
10.1186/1471-2164-11-273
A jackknife-like method for classification and uncertainty assessment of multi-category tumor samples using gene expression informationCited by: 3
Author(s): Wensheng Zhang, Kelly R. Robbins, Yupeng Wang, Keith Bertrand, Romdhane Rekaya
Software Mentions: 1
Published: over 14 years ago
10.1186/1471-2458-7-74
The effectiveness of adding cognitive behavioural therapy aimed at changing lifestyle to managed diabetes care for patients with type 2 diabetes: design of a randomised controlled trialCited by: 33
Author(s): L.M.C. Welschen, Patricia van Oppen, Joost Dekker, Lex M. Bouter, W.A.B. Stalman, Giel Nijpels
Software Mentions: 1
Published: over 17 years ago
10.1186/s12900-016-0055-7
Structuprint: a scalable and extensible tool for two-dimensional representation of protein surfacesCited by: 11
Author(s): Dimitrios-Georgios Kontopoulos, Dimitriοs Vlachakis, Georgia Tsiliki, Sofia Kossida
Software Mentions: 1
Published: over 8 years ago
10.3390/ma14185236
Phononic Bandgap Optimization in Sandwich Panels Using Cellular Truss CoresCited by: 5
Author(s): Leonel Quinteros, Viviana Meruane, Eduardo Lenz Cardoso, Rafael O. Ruiz
Software Mentions: 1
Published: about 3 years ago
10.3390/microorganisms5020029
Toxin Variability Estimations of 68 Alexandrium ostenfeldii (Dinophyceae) Strains from The Netherlands Reveal a Novel Abundant GymnodimineCited by: 24
Author(s): Helge Martens, Urban Tillmann, Kirsi Harju, Carmela Dell’Aversano, Bernd Krock
Software Mentions: 1
Published: over 7 years ago