An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: cran: PHENIX

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/PHENIX

Phenotypic Integration Index
7 versions
Latest release: about 8 years ago
1 dependent package
161 downloads last month

Science Score: 75/100
Starting Score: 100 points
Penalties:
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  • -10 No science terms in description
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Very Likely Science (75)

Papers Mentioning PHENIX 2,287

10.1107/S2059798319010027
Structural comparison of protiated, H/D-exchanged and deuterated human carbonic anhydrase IX
Cited by: 11
Author(s): Katarina Koruza, Bénédicte Lafumat, Maria Nyblom, Brian P. Mahon, Wolfgang Knecht, Robert McKenna, S.Z. Fisher
Software Mentions: 2
Published: almost 6 years ago
10.3389/fimmu.2021.625808
Structural Basis of VSIG3: The Ligand for VISTA
Cited by: 11
Author(s): Xiaoxue Xie, Caiping Chen, Wenting Chen, Jingwei Jiang, Lanlan Wang, Tingting Li, Hongbin Sun, Jun Li
Software Mentions: 2
Published: over 4 years ago
10.1107/S2059798319000081
Engineered variants provide new insight into the structural properties important for activity of the highly dynamic, trimeric protein disulfide isomerase ScsC from Proteus mirabilis
Cited by: 5
Author(s): Emily Furlong, Fabian Kurth, Lakshmanane Premkumar, Andrew E. Whitten, Jennifer L. Martin
Software Mentions: 2
Published: over 6 years ago
10.1186/1472-6807-12-13
Crystal structure of the Yersinia enterocolitica type III secretion chaperone SycD in complex with a peptide of the minor translocator YopD
Cited by: 25
Author(s): Madeleine Schreiner, Hartmut H. Niemann
Software Mentions: 2
Published: over 13 years ago
10.1186/s13068-017-1009-4
Determination of the native features of the exoglucanase Cel48S from Clostridium thermocellum
Cited by: 21
Author(s): Yajun Li, Shiyue Liu, Sheng Dong, Renmin Li, Yingang Feng, Qiu Cui
Software Mentions: 2
Published: over 7 years ago
10.1016/j.jbc.2021.100662
The molecular basis of spectral tuning in blue- and red-shifted flavin-binding fluorescent proteins
Cited by: 14
Author(s): Katrin Röllen, Joachim Granzin, Alina Remeeva, Mehdi D. Davari, Thomas Gensch, Vera V. Nazarenko, Kirill Kovalev, Andrey Bogorodskiy, Valentin Borshchevskiy, Stefanie Hemmer, Ulrich Schwaneberg, Valentin Gordeliy, Karl‐Erich Jaeger, Renu Batra‐Safferling, Ivan Gushchin, Ulrich Krauß
Software Mentions: 2
Published: over 4 years ago
10.1016/j.jbc.2021.100684
Crystal structure of the catalytic domain of botulinum neurotoxin subtype A3
Cited by: 3
Author(s): Oneda Leka, Yufan Wu, Xiao Dan Li, Richard A. Kammerer
Software Mentions: 2
Published: over 4 years ago
10.1107/S1399004713033634
Multi-PAS domain-mediated protein oligomerization of PpsR from<i>Rhodobacter sphaeroides</i>
Cited by: 11
Author(s): Udo Heintz, Anton Meinhart, Andreas Winkler
Software Mentions: 2
Published: over 11 years ago
10.3389/fgene.2021.632423
MazEF Toxin-Antitoxin System-Mediated DNA Damage Stress Response in Deinococcus radiodurans
Cited by: 10
Author(s): Jingli Dai, Zijing Chen, Jinfeng Hou, Yudong Wang, Miao Guo, Junhui Cao, Liangyan Wang, Hong Xu, Bing Teng, Ye Zhao
Software Mentions: 2
Published: over 4 years ago
10.3389/fmicb.2018.01750
Crystal Structures of R-Type Bacteriocin Sheath and Tube Proteins CD1363 and CD1364 From Clostridium difficile in the Pre-assembled State
Cited by: 12
Author(s): Nina Schwemmlein, Jan Pippel, E.M. Gazdag, Wulf Blankenfeldt
Software Mentions: 2
Published: almost 7 years ago
10.3389/fpls.2018.01737
Expanding the Plant GSTome Through Directed Evolution: DNA Shuffling for the Generation of New Synthetic Enzymes With Engineered Catalytic and Binding Properties
Cited by: 10
Author(s): Evangelia Chronopoulou, Anastassios C. Papageorgiou, Farid S. Ataya, Irini Nianiou-Obeidat, Panagiotis Madesis, Nikolaos E. Labrou
Software Mentions: 2
Published: over 6 years ago
10.1186/s12900-015-0037-1
Binding of undamaged double stranded DNA to vaccinia virus uracil-DNA Glycosylase
Cited by: 8
Author(s): Norbert Schormann, Surajit Banerjee, Robert P. Ricciardi, Debasish Chattopadhyay
Software Mentions: 2
Published: about 10 years ago
10.1107/S139900471501857X
Native sulfur/chlorine SAD phasing for serial femtosecond crystallography
Cited by: 50
Author(s): Takanori Nakane, Changyong Song, Mamoru Suzuki, Eriko Nango, Jun Kobayashi, Tetsuya Masuda, Shiro Inoue, Eiichi Mizohata, Toru Nakatsu, Tomoyuki Tanaka, Rie Tanaka, Tatsuro Shimamura, Kensuke Tono, Yasumasa Joti, Takashi Kameshima, Takaki Hatsui, Makina Yabashi, Osamu Nureki, So Iwata, Michihiro Sugahara
Software Mentions: 2
Published: over 9 years ago
10.1107/S2059798319006831
Structural and functional characterization of CMP-<i>N</i>-acetylneuraminate synthetase from<i>Vibrio cholerae</i>
Cited by: 1
Author(s): Sucharita Bose, Debayan Purkait, Deepthi Joseph, Vinod Nayak, Ramaswamy Subramanian
Software Mentions: 2
Published: about 6 years ago
10.26508/lsa.202000873
A conserved PI(4,5)P2–binding domain is critical for immune regulatory function of DOCK8
Cited by: 8
Author(s): Tetsuya Sakurai, Mutsuko Kukimoto-Niino, Kazufumi Kunimura, Nana Yamane, Daiji Sakata, Ryosuke Aihara, Tomoharu Yasuda, Shigeyuki Yokoyama, Mikako Shirouzu, Yoshihiro Fukui, Takehito Uruno
Software Mentions: 2
Published: over 4 years ago
10.1107/S0907444913025250
Improvements in the order, isotropy and electron density of glypican-1 crystals by controlled dehydration
Cited by: 13
Author(s): W. Awad, Gabriel Svensson Birkedal, Marjolein M.G.M. Thunnissen, Katrin Mani, D.T. Logan
Software Mentions: 2
Published: over 11 years ago
10.1107/S2059798318013347
Improving the accuracy and resolution of neutron crystallographic data by three-dimensional profile fitting of Bragg peaks in reciprocal space
Cited by: 23
Author(s): Brendan Sullivan, Rick Archibald, Patricia S. Langan, Holger Dobbek, Martin Bommer, Robert L. McFeeters, Leighton Coates, Xiaoping Wang, Franz X. Gallmeier, J.M. Carpenter, V. E. Lynch, Paul Langan
Software Mentions: 2
Published: almost 7 years ago
10.3389/fcimb.2016.00160
Structural Insights into Substrate Recognition by Clostridium difficile Sortase
Cited by: 4
Author(s): Jui-Chieh Yin, Chun-Hsien Fei, Yen-Chen Lo, Y.-Y. Hsiao, Jyun-Cyuan Chang, Jay C. Nix, Yuan-Yu Chang, Lee‐Wei Yang, I-Hsiu Huang, Shuying Wang
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0241912
Molecular analysis of cyclic α-maltosyl-(1→6)-maltose binding protein in the bacterial metabolic pathway
Cited by: 2
Author(s): Masanori Kohno, T. Arakawa, Naoki Sunagawa, Tetsuya Mori, Kiyohiko Igarashi, Tetsuya Nishimoto, Shinya Fushinobu
Software Mentions: 2
Published: over 4 years ago
10.1111/febs.13930
Hydrogen peroxide‐mediated conversion of coproheme to heme <i>b</i> by HemQ—lessons from the first crystal structure and kinetic studies
Cited by: 36
Author(s): Stefan Hofbauer, Georg Mlynek, Lisa Milazzo, Dominic Pühringer, Daniel Maresch, Irene Schaffner, Paul G. Furtmüller, Giulietta Smulevich, Kristina Djinović-Carugo, Christian Obinger
Software Mentions: 2
Published: over 8 years ago
10.1107/S205979831801519X
Iron–sulfur clusters have no right angles
Cited by: 15
Author(s): Nigel W. Moriarty, Paul D. Adams
Software Mentions: 2
Published: over 6 years ago
10.1002/1873-3468.13246
Tripeptide binding in a proton‐dependent oligopeptide transporter
Cited by: 20
Author(s): Maria Martinez Molledo, E.M. Quistgaard, Christian Löw
Software Mentions: 2
Published: almost 7 years ago
10.1186/s12934-019-1190-1
Structural and functional characterization of a novel cold-active S-formylglutathione hydrolase (SfSFGH) homolog from Shewanella frigidimarina, a psychrophilic bacterium
Cited by: 11
Author(s): Chang Woo Lee, Woo-Kyoung Yoo, Sunha Park, Ly Le, Chang-Sung Jeong, Bum Han Ryu, Seung Chul Shin, Han-Woo Kim, Hyun Park, Kyeong Kyu Kim, T. Doohun Kim, Jun Hyuck Lee
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0040066
The Crystal Structures of Dystrophin and Utrophin Spectrin Repeats: Implications for Domain Boundaries
Cited by: 27
Author(s): M. Muthu, Kylie A. Richardson, Andrew J. Sutherland-Smith
Software Mentions: 2
Published: about 13 years ago
10.1080/14756366.2020.1837123
Crystal structure-guided design of berberine-based novel chitinase inhibitors
Cited by: 13
Author(s): Lei Chen, Ling Zhu, Jinli Chen, Wei Chen, Xuhong Qian, Qing Yang
Software Mentions: 2
Published: over 5 years ago
10.1107/S0907444913024608
Split green fluorescent protein as a modular binding partner for protein crystallization
Cited by: 27
Author(s): Hau B. Nguyen, Li Wei Hung, Todd O. Yeates, Thomas C. Terwilliger, Geoffrey S. Waldo
Software Mentions: 2
Published: over 11 years ago
10.1107/S1399004714018732
Structural basis for the recognition of muramyltripeptide by<i>Helicobacter pylori</i>Csd4, a<scp>D</scp>,<scp>L</scp>-carboxypeptidase controlling the helical cell shape
Cited by: 19
Author(s): Hyoun Sook Kim, Jieun Kim, Ha Na Im, Doo Ri An, Mijoon Lee, Dušan Hesek, Shahriar Mobashery, Jin Young Kim, Kun Cho, Hye Jin Yoon, Byung Woo Han, Byung Il Lee, Se Won Suh
Software Mentions: 2
Published: almost 11 years ago
10.12688/f1000research.6060.1
Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7
Cited by: 3
Author(s): Markus Knipp, Hideaki Ogata, Giancarlo Soavi, Giulio Cerullo, Alessandro Allegri, Stefania Abbruzzetti, Stefano Bruno, Cristiano Viappiani, Axel Bidon‐Chanal, F. Javier Luque
Software Mentions: 2
Published: over 10 years ago
10.1140/epjc/s10052-015-3819-5
Heavy-flavour and quarkonium production in the LHC era: from proton–proton to heavy-ion collisions
Cited by: 396
Author(s): A. Andronic, François Arleo, R. Arnaldi, A. Beraudo, E. Bruna, D. Caffarri, Z. Conesa del Valle, J. G. Contreras, T. Dahms, A. Dainese, Magdalena Djordjevic, E. G. Ferreiro, H. Fujii, Pol Bernard Gossiaux, R. Granier de Cassagnac, C. Hadjidakis, M. He, Hendrik van Hees, W. A. Horowitz, R. Kolevatov, B. Z. Kopeliovich, J. P. Lansberg, Maria-Paola Lombardo, C. Lourenço, Gines Martinez-Garcia, L. Massacrier, C. Mironov, A. Mischke, Marlene Nahrgang, M. Nguyen, J. Nystrand, Stéphane Peigné, S. Porteboeuf-Houssais, I. K. Potashnikova, A. Rakotozafindrabe, Ralf Rapp, P. Robbe, M. Rosati, P. Rosnet, Helmut Satz, R. Schicker, I. Schienbein, Iván Schmidt, E. Scomparin, Rajnikant Sharma, J. Stachel, D. Stocco, Michael Strickland, R. Tieulent, B. A. Trzeciak, Jan Uphoff, Ivan Vitev, R. Vogt, K. Watanabe, H. K. Woehri, Pengfei Zhuang
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0192488
The first dipeptidyl peptidase III from a thermophile: Structural basis for thermal stability and reduced activity
Cited by: 7
Author(s): Igor Sabljić, Marko Tomin, Mihaela Matovina, Iva Sučec, Ana Tomašić Paić, Antonija Tomić, Marija Abramić, Sanja Tomić
Software Mentions: 2
Published: over 7 years ago
10.1140/epjc/s10052-015-3422-9
Measurement of pion, kaon and proton production in proton–proton collisions at $$\sqrt{s} = 7$$ s = 7 TeV
Cited by: 129
Author(s): J. Adam, D. Adamová, M. M. Aggarwal, G. Aglieri Rinella, M. Agnello, Neelima Agrawal, Z. Ahammed, I. Ahmed, Sang Un Ahn, I. Aimo, S. Aiola, M. Ajaz, A. Akindinov, Sk Noor Alam, Dmitry Aleksandrov, B. Alessandro, D. Alexandre, R. Alfaro Molina, A. Alici, A. Alkin, J. Alme, T. Alt, S. Altinpinar, I. Altsybeev, C. Alves Garcia Prado, C. Andrei, A. Andronic, V. Anguelov, J. Anielski, T. Antičić, F. Antinori, P. Antonioli, L. Aphecetche, H. Appelshäuser, S. Arcelli, N. Armesto, R. Arnaldi, T. Aronsson, I. C. Arsene, M. Arslandok, A. Augustinus, R. Averbeck, M. D. Azmi, M. Bach, A. Badalà, Y. W. Baek, S. Bagnasco, R. Bailhache, R. Bala, A. Baldisseri, M. Ball, F. Baltasar Dos Santos Pedrosa, R. C. Baral, Anastasia Maria Barbano, R. Barbera, F. Barile, G. G. Barnaföldi, L. S. Barnby, V. Barret, P. Bartalini, J. Bartke, E. Bartsch, M. Basile, N. Bastid, S. Basu, B. Bathen, G. Batigne, A. Batista Camejo, B. Batyunya, P. C. Batzing, I. G. Bearden, H. Beck, C. Bedda, N. K. Behera, I. Belikov, F. Bellini, H. Bello Martínez, R. Bellwied, R. Belmont, E. Belmont‐Moreno, V. Belyaev, G. Bencédi, S. Beolè, I. Berceanu, A. Bercuci, Y. Berdnikov, D. Berényi, R. A. Bertens, D. Berzano, L. Betev, A. Bhasin, I. R. Bhat, A. K. Bhati, B. Bhattacharjee, J. Bhom, L. Bianchi, N. Bianchi, C. Bianchin, J. Bielčík, J. Bielčíková, A. Bilandzic, S. Biswas, S. Bjelogrlic, F. Blanco, D. Blau, C. Blume, F. Bock, A. Bøgdanov, H. Bøggild, L. Boldizsár, M. Bombara, J. Book, H. Borel, A. Borissov, M. Borri, F. Bossú, M. Botje, E. Botta, S. Böttger, P. Braun‐Munzinger, M. Bregant, T. Breitner, T. A. Broker, T. A. Browning, M. Broz, E. Brücken, E. Bruna, G. Bruno, D. Budnikov, H. Buesching, S. Bufalino, P. Bunčić, O. Busch, Z. Buthelezi, J. T. Buxton, D. Caffarri, X. Cai, H. Caines, L. Calero Diaz, A. Caliva, E. Calvo Villar, P. Camerini, F. Carena, W. Carena, J. Castillo Castellanos, A. Castro, E. A. R. Casula, C. Cavicchioli, C. Ceballos Sànchez, J. Cepila, P. Cerello, B. Chang, S. Chapeland, M. Chartier, J. L. Charvet, S. Chattopadhyay, V. Chelnokov, M. Cherney, C. Cheshkov, B. Cheynis, V. Chibante Barroso, D. D. Chinellato, P. Chochula, K. Choi, M. Chojnacki, S. Choudhury, P. Christakoglou, C. H. Christensen, P. Christiansen, T. Chujo, S. U. Chung, C. Cicalò, L. Cifarelli, F. Cindolo, J. Cleymans, F. Colamaria, D. Colella, A. Collu, M. Colocci, G. Conesa Balbastre, Z. Conesa del Valle, M. Connors, J. G. Contreras, Thomas Michael Cormier, Y. Corrales Morales, I. Cortés Maldonado, P. Cortese, M. R. Cosentino, F. Costa, P. Crochet, R. Cruz Albino, E. Cuautle, L. Cunqueiro, T. Dahms, A. Dainese, A. Danu, D. Das, I. Das, S. Das, A. Dash, S. Dash, S. De, A. De, G. de Cataldo, J. de Cuveland, A. De Falco, D. De Gruttola, N. De Marco, S. De Pasquale, A. Deisting, A. Deloff, E. Dénes, G. DʼErasmo, D. Di Bari, A. Di Mauro, P. Di Nezza, M. A. Diaz Corchero, T. Dietel, P. Dillenseger, R. Divià, Oeystein Djuvsland, A. Dobrin, T. Dobrowolski, D. Domenicis Gimenez, B. Dönigus, O. Dordic, A. K. Dubey, A. Dubla, L. Ducroux, P. Dupieux, R. J. Ehlers, D. Elia, H. Engel, B. Erazmus, F. Erhardt, D. Eschweiler, B. Espagnon, M. Estienne, S. Esumi, J. Eum, D. Evans, S. Evdokimov, G. Eyyubova, L. Fabbietti, D. Fabris, J. Faivre, A. Fantoni, M. Fasel, L. Feldkamp, D. Felea, A. Feliciello, Г. Феофилов, J. Ferencei, A. Fernández Téllez, E. G. Ferreiro, A. Ferretti, A. Festanti, J. Figiel, M. A. S. Figueredo, S. Filchagin, D. Finogeev, F. M. Fionda, E. M. Fiore, M. G. Fleck, M. Floris, S. Foertsch, P. Foka, S. Fokin, E. Fragiacomo, A. Francescon, U. Frankenfeld, U. Fuchs, C. Furget, A. Furs, M. Fusco Girard, J. J. Gaardhøje, M. Gagliardi, A. M. Gago, M. Gallio, D. R. Gangadharan, P. Ganoti, C. Gao, C. Garabatos, E. García-Solis, C. Gargiulo, P. Gasik, M. Germain, A. Gheaţă, M. Gheata, P. Ghosh, S. K. Ghosh, P. Gianotti, P. Giubellino, P. Giubilato, E. Gladysz Dziadus, P. Glässel, A. Gómez Ramírez, Pedro González Zamora, S. Gorbunov, L. Görlich, S. Gotovac, V. Grabski, L. K. Graczykowski, A. Grelli, A. Grigoras, C. Grigoras, V. Grigoriev, A. Grigoryan, S. Grigoryan, B. Grinyov, N. Grion, J. F. Grosse-Oetringhaus, J.‐Y. Grossiord, R. Grosso, F. Guber, R. Guernane, B. Guerzoni, K. Gulbrandsen, H. Gulkanyan, T. Gunji, A. Gupta, R. Gupta, R. Haake, Ø. Haaland, C. Hadjidakis, M. Haiduc, H. Hamagaki, G. Hamar, L. D. Hanratty, A. Hansen, J. W. Harris, H. Hartmann, A. Harton, D. Hatzifotiadou, S. Hayashi, S. T. Heckel, M. Heide, H. Helstrup, A. Herghelegiu, G. Herrera Corral, B. A. Hess, K. F. Hetland, T. E. Hilden, H. Hillemanns, B. Hippolyte, P. Hristov, M. Huang, T. J. Humanic, N. Hussain, T. Hussain, D. Hutter, Dae Sung Hwang, R. Ilkaev, I. Ilkiv, M. Inaba, C. Ionita, M. Ippolitov, M. Irfan, M. Ivanov, V. Ivanov, V. Izucheev, P. Jacobs, C. Jahnke, H. J. Jang, M. A. Janik, P. H. S. Y. Jayarathna, C. Jena, S. Jena, R. T. Jimenez Bustamante, P. G. Jones, H. Jung, A. Jusko, P. Kaliňák, A. Kalweit, J. Kamin, J. H. Kang, V. Kaplin, S. Kar, A. Karasu Uysal, O. Karavichev, T. Karavicheva, E. Karpechev, U. Kebschull, R. Keidel, D. L. D. Keijdener, M. Keil, K. H. Khan, M. Mohisin Khan, P. Khan, S. A. Khan, A. Khanzadeev, Y. Kharlov, B. Kileng, B. Kim, D. W. Kim, D. J. Kim, H. Kim, J. S. Kim, M. Kim, S. Kim, T. Kim, S. Kirsch, I. Kisel, S. Kiselev, A. Kisiel, G. Kiss, J. L. Klay, C. Klein, J. Klein, C. Klein-Bösing, Alexander Kluge, M. L. Knichel, A. G. Knospe, T. Kobayashi, C. Kobdaj, M. Kofarago, M. K. Köhler, T. Kollegger, A. Kolojvari, V. Kondratiev, N. Kondratyeva, E. Kondratyuk, A. Konevskikh, C. Kouzinopoulos, O. Kovalenko, В. Коваленко, M. Kowalski, S. Kox, G. Koyithatta Meethaleveedu, J. Král, I. Králik, A. Kravčáková, M. Krelina, M. Kretz, M. Krivda, F. Křížek, E. Kryshen, M. Krzewicki, A. M. Kubera, V. Kučera, Y. Kucheriaev, T. Kugathasan, C. Kuhn, P. G. Kuijer, I. Kulakov, J. Kumar, L. Kumar, P. Kurashvili, A. Kurepin, A. Kuryakin, S. Kushpil, M. J. Kweon, Y. Kwon, S. L. La Pointe, P. La Rocca, C. Lagana Fernandes, I. Lakomov, R. Langoy, C. Lara, A. Lardeux, A. Lattuca, E. Laudi, R. Lea, L. Leardini, G. R. Lee, S. Lee, I. Legrand, J. Lehnert, R. C. Lemmon, V. Lenti, E. Leogrande, I. Léon Monźon, M. Leoncino, P. Lévai, S. Li, X. Li, J. Lien, R. Lietava, S. Lindal, V. Lindenstruth, C. Lippmann, M. A. Lisa, H. M. Ljunggren, D. F. Lodato, P. I. Loenne, V. R. Loggins, V. Loginov, C. Loizides, X. Lopez, E. López Torres, A. J. Lowe, X.-G. Lu, P. Luettig, M. Lunardon, G. Luparello, A. Maevskaya, M. Mager, S. Mahajan, S. M. Mahmood, A. Maire, R. Majka, M. Malaev, I. Maldonado Cervantes, L. Malinina, D. Mal’Kevich, P. Malzacher, A. Mamonov, L. Manceau, V. Manko, F. Manso, V. Manzari, M. Marchisone, J. Mareš, G. V. Margagliotti, A. Margotti, J. Margutti, A. Marı́n, C. Markert, M. Marquard, N. A. Martin, J. Martin Blanco, P. Martinengo, M. Martı́nez, G. Garcı́a, M. Martinez Pedreira, Y. Martynov, A. Mas, S. Masciocchi, M. Masera, A. Masoni, L. Massacrier, A. Mastroserio, H. Masui, A. Matyja, Christoph Mayer, J. Mazer, M. A. Mazzoni, D. McDonald, F. Meddi, A. Menchaca‐Rocha, E. Meninno, J. Mercado Pérez, M. Meres, Y. Miake, M. M. Mieskolainen, K. Mikhaylov, L. Milano, J. Milošević, L. M. Minervini, A. Mischke, Aditya Nath Mishra, D. Miśkowiec, J. Mitra, C. M. Mitu, N. Mohammadi, B. Mohanty, L. Molnár, L. Montaño Zetina, E. Montes, M. Morando, D. A. Moreira De Godoy, S. Moretto, A. Morreale, A. Morsch, V. Muccifora, E. Mudnić, D. Mühlheim, S. Muhuri, M. Mukherjee, H. Müller, J. D. Mulligan, M. G. Munhoz, S. Murray, L. Musa, J. Mušinský, B. K. Nandi, R. Nania, E. Nappi, M. U. Naru, C. Nattrass, K. Nayak, T. K. Nayak, S. Nazarenko, A. Nedosekin, L. Nellen, F. Ng, M. Nicassio, M. Niculescu, J. Niedziela, B. S. Nielsen, S. Nikolaev, S. Nikulin, V. Nikulin, F. Noferini, P. Nomokonov, G. Nooren, J. Norman, A. Nyanin, J. Nystrand, H. Oeschler, S. B. Oh, S. Oh, A. Ohlson, A. Okatan, T. Okubo, L. Oláh, J. Oleniacz, A. C. Oliveira Da Silva, Michael Henry Oliver, J. Onderwaater, C. Oppedisano, A. Ortiz Velasquez, A. Öskarsson, J. Otwinowski, K. Oyama, K. Ozdemir, Y. Pachmayer, P. Pagano, G. Paić, C. Pajares, S. K. Pal, J. Pan, A. K. Pandey, D. Pant, V. Papikyan, G. S. Pappalardo, P. Pareek, W. J. Park, S. Parmar, A. Passfeld, V. Paticchio, B. Paul, T. Pawlak, T. Peitzmann, H. Pereira Da Costa, E. Pereira De Oliveira Filho, D. Peresunko, C. Lara, V. Peskov, Y. Pestov, V. Petráček, V. Petrov, M. Petrovici, C. Petta, S. Piano, M. Pikna, P. Pillot, O. Pinazza, L. Pinsky, D. B. Piyarathna, M. Płoskoń, M. Planinić, J. Pluta, S. Pochybová, P. L.M. Podesta-Lerma, M. G. Poghosyan, B. Polichtchouk, N. Poljak, W. Poonsawat, A. Pop, S. Porteboeuf-Houssais, J. Porter, J. Pospı́šil, Sidharth Kumar Prasad, R. Preghenella, F. Prino, C. Pruneau, I. Pshenichnov, M. Puccio, G. Puddu, P. R. Pujahari, V. Punin, J. Putschke, H. Qvigstad, A. Rachevski, S. Raha, S. Rajput, J. Rak, A. Rakotozafindrabe, L. Ramello, R. Raniwala, S. Raniwala, Sami Sakari Rasanen, B. T. Rascanu, D. Rathee, V. Razazi, K. F. Read, J. S. Réal, K. Redlich, R. Reed, A. Rehman, P. Reichelt, M. Reicher, F. Reidt, X. Ren, R. Renfordt, A. R. Reolon, A. Reshetin, F. Rettig, J.-P. Revol, K. Reygers, V. Riabov, R. A. Ricci, T. Richert, Matthias Richter, P. Riedler, W. Riegler, F. Riggi, C. Ristea, A. Rivetti, E. Rocco, M. Rodríguez Cahuantzi, A. Rodriguez Manso, K. Røed, E. Rogochaya, D. Røhr, D. Röhrich, R. Romita, F. Ronchetti, L. Ronflette, P. Rosnet, A. M. Rossi, F. Roukoutakis, A. Roy, C. Roy, P. Roy, A.J. Rubio Montero, R. Rui, R. Russo, E. Ryabinkin, Y. F. Ryabov, A. Rybicki, S. Sadovsky, K. Šafǎŕık, B. Sahlmuller, P. Sahoo, R. Sahoo, S. Sahoo, P. K. Sahu, J. Saini, S. Sakai, M. A. Saleh, Carlos A. Salgado, J. Salzwedel, S. Sambyal, V. Samsonov, X. Sanchez Castro, L. Šándor, A. Sandoval, M. Sano, G. Santagati, D. Sarkar, E. Scapparone, F. Scarlassara, R. P. Scharenberg, C. Schiaua, R. Schicker, C. Schmidt, H. R. Schmidt, S. Schuchmann, J. Schukraft, Martin Schulc, T. Schuster, Y. Schütz, K. Schwarz, K. Schweda, G. Scioli, E. Scomparin, R. Scott, K. S. Seeder, J. Seger, Y. Sekiguchi, I. Selyuzhenkov, K. Senosi, J. Seo, E. Serradilla, A. Sevcenco, A. Shabanov, A. Shabetai, O. Shadura, R. Shahoyan, A. Shangaraev, A. Sharma, N. Sharma, K. Shigaki, K. Shtejer, Y. Sibiriak, S. Siddhanta, K. M. Sielewicz, T. Siemiarczuk, D. Silvermyr, C. Silvestre, G. Simatovic, G. Simonetti, R. Singaraju, R. Singh, S. Singha, V. Singhal, Bikash Sinha, T. Sinha, B. Sitár, M. Sitta, T. B. Skaali, M. Słupecki, N. Smirnov, Raimond Snellings, T. W. Snellman, C. Søgaard, R. A. Soltz, J. Song, M. Song, Zixuan Song, F. Soramel, S. Sörensen, M. Špaček, E. Spiriti, I. Sputowska, M. Stassinaki, B. Srivastava, J. Stachel, I. Stan, G. Stefanek, M. Steinpreis, E. Stenlund, G. Steyn, J. H. Stiller, D. Stocco, P. Strmeň, Alexandre Alarcon Do Passo Suaide, T. Sugitate, C. Suire, M. Suleymanov, R. Sultanov, M. Šumbera, T. J. M. Symons, A. Szabó, A. Szanto de Toledo, I. Szarka, A. Szczepankiewicz, M. Szymański, J. Takahashi, N. Tanaka, M. A. Tangaro, J. D. Tapia ∋Takaki, A. Tarantola Peloni, Mohammad Tariq, M. G. Târzilă, A. Tauro, G. Tejeda Muñoz, A. Telesca, K. Terasaki, C. Terrevoli, B. Teyssier, J. Thäder, D. Thomas, R. Tieulent, A. R. Timmins, A. Toia, S. Trogolo, V. Trubnikov, W. H. Trzaska, T. Tsuji, A. Tumkin, R. Turrisi, Trine Spedstad Tveter, K. Ullaland, A. Uras, G. L. Usai, A. Utrobicic, M. Vajzer, M. Vala, L. Valencia Palomo, S. Vallero, J. Van Der Maarel, J. W. Van Hoorne, M. van Leeuwen, T. Vǎnát, P. Vande Vyvre, D. Varga, A. Vargas, M. Vargyas, R. Varma, M. Vasileiou, A. Vasiliev, A. Vauthier, V. Vechernin, A. M. Veen, M. Veldhoen, A. Velure, M. Venaruzzo, E. Vercellin, S. Vergara Limón, R. Vernet, M. Verweij, L. Vickovic, G. Viesti, J. Viinikainen, Z. Vilakazi, O. Villalobos Baillie, А. Виноградов, L. Vinogradov, Y. Vinogradov, T. Virgili, V. Vislavicius, Y. P. Viyogi, A. Vodopyanov, Martin Andreas Volkl, K. Voloshin, S. A. Voloshin, G. Volpe, B. von Haller, I. Vorobyev, D. Vranić, J. Vrláková, B. Vulpescu, A. Vyushin, B. Wagner, Jan Wagner, H. Wang, M. Wang, Y. Wang, Daisuke Watanabe, Martin Weber, S. G. Weber, J. P. Wessels, U. Westerhoff, J. Wiechuła, J. Wikne, M. Wilde, G. Wilk, J. Wilkinson, M. C. S. Williams, B. Windelband, Michael Andreas Winn, C. G. Yaldo, Y. Yamaguchi, H. J. Yang, P. Yang, S. Yano, S. Yasnopolskiy, Z. Yin, H. Yokoyama, I. K. Yoo, V. Yurchenko, I. E. Yushmanov, A. Zaborowska, V. Zaccolo, A. Zaman, C. Zampolli, Henrique José Correia Zanoli, S. Zaporozhets, A. Zarochentsev, P. Závada, N. Zaviyalov, H. Zbroszczyk, I. S. Zgura, M. Zhalov, H. Zhang, X. Zhang, Y. Zhang, C. Zhao, N. Zhigareva, D. Zhou, Y. Zhou, Z. Zhou, H. Zhu, J. Zhu, X. Zhu, A. Zichichi, A. Zimmermann, M. B. Zimmermann, G. Zinovjev, M. Zyzak
Software Mentions: 2
Published: over 10 years ago
10.1111/febs.15601
Angiotensin‐converting enzyme open for business: structural insights into the subdomain dynamics
Cited by: 16
Author(s): Gyles E. Cozier, Lizelle Lubbe, Edward D. Sturrock, K. Ravi Acharya
Software Mentions: 2
Published: over 4 years ago
10.1016/j.molcel.2018.08.039
Substrate Recognition and Autoinhibition in the Central Ribonuclease RNase E
Cited by: 35
Author(s): Katarzyna Bandyra, J.M. Wandzik, Ben F. Luisi
Software Mentions: 2
Published: almost 7 years ago
10.3389/fcimb.2018.00051
Structural Insights into the Mechanisms of Action of Short-Peptide HIV-1 Fusion Inhibitors Targeting the Gp41 Pocket
Cited by: 13
Author(s): Xiujuan Zhang, Yuanmei Zhu, Hao Hu, Senyan Zhang, Pengfei Wang, Huihui Chong, Jin‐Sheng He, Xinquan Wang, Yuxian He
Software Mentions: 2
Published: over 7 years ago
10.1016/j.molcel.2009.09.038
An Autoinhibitory Tyrosine Motif in the Cell-Cycle-Regulated Nek7 Kinase Is Released through Binding of Nek9
Cited by: 86
Author(s): Mark W. Richards, Laura O’Regan, Corine Mas-Droux, Joëlle Blot, Jack Cheung, Swen Hoelder, Andrew M. Fry, Richard Bayliss
Software Mentions: 2
Published: over 15 years ago
10.1016/j.molcel.2021.02.021
Structural basis for conformational equilibrium of the catalytic spliceosome
Cited by: 21
Author(s): Max E. Wilkinson, Sebastian M. Fica, Wojciech P. Galej, Kiyoshi Nagai
Software Mentions: 2
Published: over 4 years ago
10.1080/22221751.2021.1899770
The preclinical inhibitor GS441524 in combination with GC376 efficaciously inhibited the proliferation of SARS-CoV-2 in the mouse respiratory tract
Cited by: 33
Author(s): Yuejun Shi, Lei Shuai, Zhiyuan Wen, Chong Wang, Yuanyuan Yan, Zhe Jiao, Fenglin Guo, Zhen F. Fu, Huanchun Chen, Zhigao Bu, Guiqing Peng
Software Mentions: 2
Published: over 4 years ago
10.1080/22221751.2020.1865840
Structure of the multiple functional domains from coronavirus nonstructural protein 3
Cited by: 8
Author(s): Mengxia Li, Gang Ye, Yu Si, Zhou Shen, Zhu Liu, Yuejun Shi, Shaobo Xiao, Zhen F. Fu, Guiqing Peng
Software Mentions: 2
Published: over 4 years ago
10.1289/ehp.1306902
Mimicking of Estradiol Binding by Flame Retardants and Their Metabolites: A Crystallographic Analysis
Cited by: 79
Author(s): R.A. Gosavi, Gabriel A. Knudsen, Linda S. Birnbaum, Lars C. Pedersen
Software Mentions: 2
Published: almost 12 years ago
10.1371/journal.ppat.1004169
Structural Insights into SraP-Mediated Staphylococcus aureus Adhesion to Host Cells
Cited by: 79
Author(s): Yong Yang, Yong-Liang Jiang, Juan Zhang, Lei Wang, Xiaohui Bai, Shijie Zhang, Yan-Min Ren, Na Li, Yong Hui Zhang, Zhiyong Zhang, Qingguo Gong, Yide Mei, Ting Xue, Jing-Ren Zhang, Yuxing Chen, Cong‐Zhao Zhou
Software Mentions: 2
Published: about 11 years ago
10.3390/molecules25102404
Structural Basis for Broad Substrate Selectivity of Alcohol Dehydrogenase YjgB from Escherichia coli
Cited by: 2
Author(s): Giang T. Nguyen, Yeon-Gil Kim, Joo‐Myung Ahn, Jeong Ho Chang
Software Mentions: 2
Published: about 5 years ago
10.1186/1756-0500-5-626
Crystal structures of wild-type and mutated cyclophilin B that causes hyperelastosis cutis in the American quarter horse
Cited by: 8
Author(s): Sergei P. Boudko, Yoshihiro Ishikawa, Thomas F. Lerch, Jay C. Nix, Michael S. Chapman, Hans Peter Bächinger
Software Mentions: 2
Published: over 12 years ago
10.1371/journal.pone.0188005
Crystal structures of ternary complexes of archaeal B-family DNA polymerases
Cited by: 36
Author(s): H.M. Kropp, Karin Betz, Johannes Wirth, Kay Diederichs, Andreas Marx
Software Mentions: 2
Published: over 7 years ago
10.1107/S2059798317000067
<i>AceDRG</i>: a stereochemical description generator for ligands
Cited by: 228
Author(s): Fei Long, Robert A. Nicholls, Paul Emsley, Saulius Graǽulis, Andrius Merkys, Antanas Vaitkus, Garib N. Murshudov
Software Mentions: 2
Published: over 8 years ago
10.1038/srep22127
In-situ and real-time growth observation of high-quality protein crystals under quasi-microgravity on earth
Cited by: 7
Author(s): Akira Nakamura, Jun Ohtsuka, Tatsuki Kashiwagi, Nobutaka Numoto, Noriyuki Hirota, Takahiro Ode, Hidehiko Okada, Koji Nagata, Motosuke Kiyohara, E Suzuki, Akiko Kita, Hitoshi Wada, Masaru Tanokura
Software Mentions: 2
Published: over 9 years ago
10.1107/S2059798316016910
Strategies for carbohydrate model building, refinement and validation
Cited by: 45
Author(s): Jon Agirre
Software Mentions: 2
Published: over 8 years ago
10.1038/srep28488
Structural basis for autoinhibition and its relief of MOB1 in the Hippo pathway
Cited by: 27
Author(s): Sunyong Kim, Yuka Tachioka, Tomoyuki Mori, Toshio Hakoshima
Software Mentions: 2
Published: about 9 years ago
10.15252/embr.201745680
Active site alanine mutations convert deubiquitinases into high‐affinity ubiquitin‐binding proteins
Cited by: 40
Author(s): Marie E. Morrow, Michael T. Morgan, Marcello Clerici, Kateřina Growková, Ming Yan, David Komander, Titia K. Sixma, Michal Šimíček, Cynthia Wolberger
Software Mentions: 2
Published: almost 7 years ago
10.1038/srep30494
Crystal structures of RidA, an important enzyme for the prevention of toxic side products
Cited by: 13
Author(s): Xiwen Liu, Jianhua Zeng, Xiaolei Chen, Wei Xie
Software Mentions: 2
Published: about 9 years ago
10.3390/molecules23071538
Crystal Structure of LSD1 in Complex with 4-[5-(Piperidin-4-ylmethoxy)-2-(p-tolyl)pyridin-3-yl]benzonitrile
Cited by: 18
Author(s): Hideaki Niwa, Shin Sato, Tomoko Hashimoto, Kenji Matsuno, Takashi Umehara
Software Mentions: 2
Published: about 7 years ago
10.1107/S1399004715009438
High-resolution crystal structures of the solubilized domain of porcine cytochrome<i>b</i><sub>5</sub>
Cited by: 3
Author(s): Yu Hirano, Shigenobu Kimura, Taro Tamada
Software Mentions: 2
Published: about 10 years ago
10.3390/molecules23010111
Characterization of Two VAO-Type Flavoprotein Oxidases from Myceliophthora thermophila
Cited by: 7
Author(s): Alessandro Ferrari, H.J. Rozeboom, Aniek S.C. Vugts, Martijn J. Koetsier, R.J. Floor, Marco W. Fraaije
Software Mentions: 2
Published: over 7 years ago
10.1107/S2059798319008933
Prediction of models for ordered solvent in macromolecular structures by a classifier based upon resolution-independent projections of local feature data
Cited by: 0
Author(s): Laurel Jones, Michael Tynes, Paul Smith
Software Mentions: 2
Published: about 6 years ago
10.15252/embj.2020106164
Cryo‐EM reveals the complex architecture of dynactin's shoulder region and pointed end
Cited by: 15
Author(s): C.K. Lau, Francis J. O’Reilly, S. Balaji, Samuel E Lacey, Juri Rappsilber, Andrew P. Carter
Software Mentions: 2
Published: over 4 years ago
10.15252/embj.2019103234
Structural basis for centromere maintenance by <i>Drosophila</i> <scp>CENP</scp> ‐A chaperone <scp>CAL</scp> 1
Cited by: 27
Author(s): Bethan Medina‐Pritchard, Vasiliki Lazou, Juan Zou, Olwyn Byron, Maria Alba Abad, Juri Rappsilber, Patrick Heun, A. Arockia Jeyaprakash
Software Mentions: 2
Published: over 5 years ago
10.1186/1741-7007-9-48
Cofactor-mediated conformational control in the bifunctional kinase/RNase Ire1
Cited by: 49
Author(s): Alexei Korennykh, Pascal F. Egea, А.A. Коростелев, J. Finer-Moore, Robert M. Stroud, Chao Zhang, Kevan M. Shokat, Peter Walter
Software Mentions: 2
Published: about 14 years ago
10.1107/S2059798317016618
Molecular architectures of benzoic acid-specific type III polyketide synthases
Cited by: 11
Author(s): Charles Stewart, Kate Woods, Greg Macias, Andrew C. Allan, Roger P. Hellens, Joseph P. Noel
Software Mentions: 2
Published: over 7 years ago
10.15252/embj.2018101414
Coupling of ATPase activity, microtubule binding, and mechanics in the dynein motor domain
Cited by: 19
Author(s): Stefan Niekamp, Nicolas Coudray, Nan Zhang, Ronald D. Vale, Gira Bhabha
Software Mentions: 2
Published: about 6 years ago
10.15252/embr.202052325
NeutrobodyPlex—monitoring SARS‐CoV‐2 neutralizing immune responses using nanobodies
Cited by: 35
Author(s): Teresa R. Wagner, E. Ostertag, Philipp Kaiser, Marius Gramlich, Natalia Ruétalo, Daniel Junker, Julia Haering, Bjoern Traenkle, Matthias Becker, Alex Dulovic, H Schweizer, Stefan Nueske, Armin M. Scholz, Anne Zeck, Katja Schenke‐Layland, Annika Nelde, Monika Strengert, Juliane S. Walz, Georg Zocher, Thilo Stehle, Michael Schindler, Nicole Schneiderhan‐Marra, Ulrich Rothbauer
Software Mentions: 2
Published: over 4 years ago
10.1107/S1399004714027114
Interaction of the amyloid precursor protein-like protein 1 (APLP1) E2 domain with heparan sulfate involves two distinct binding modes
Cited by: 12
Author(s): S.O. Dahms, Magnus C. Mayer, Dirk Roeser, Gerd Multhaup, Manuel E. Than
Software Mentions: 2
Published: over 10 years ago
10.1111/mmi.12656
The structure, function and properties of sirohaem decarboxylase - an enzyme with structural homology to a transcription factor family that is part of the alternative haem biosynthesis pathway
Cited by: 14
Author(s): David J. Palmer, Susanne Schroeder, Andrew D. Lawrence, Evelyne Deery, Susana A.L. Lobo, Lı́gia M. Saraiva, Kirsty J. McLean, Andrew W. Munro, Stuart J. Ferguson, Richard W. Pickersgill, David G. Brown, Martin J. Warren
Software Mentions: 2
Published: about 11 years ago
10.1107/S2053230X18002236
Crystal structure of theMSMEG_4306gene product fromMycobacterium smegmatis
Cited by: 1
Author(s): Adarsh Kumar, Subramanian Karthikeyan
Software Mentions: 2
Published: over 7 years ago
10.1107/S1399004715002308
Capture and X-ray diffraction studies of protein microcrystals in a microfluidic trap array
Cited by: 67
Author(s): A.Y. Lyubimov, Thomas D. Murray, Antoine Koehl, Ismail Emre Araci, Monarin Uervirojnangkoorn, Oliver B. Zeldin, Aina E. Cohen, S. Michael Soltis, E.L. Baxter, Aaron S. Brewster, Nicholas K. Sauter, Axel T. Brunger, James M. Berger
Software Mentions: 2
Published: over 10 years ago
10.1186/1743-422X-7-359
Structural analysis of bacteriophage T4 DNA replication: a review in the Virology Journal series on bacteriophage T4 and its relatives
Cited by: 40
Author(s): Timothy C. Mueser, Jennifer M. Hinerman, Juliette M. Devos, Ryan A Boyer, Kandace J. Williams
Software Mentions: 2
Published: over 14 years ago
10.1107/S2053230X14003355
A range of C∊3–C∊4 interdomain angles in IgE Fc accommodate binding to its receptor CD23
Cited by: 13
Author(s): B. Dhaliwal, M.O.Y. Pang, Daopeng Yuan, Andrew J. Beavil, Brian J. Sutton
Software Mentions: 2
Published: over 11 years ago
10.1107/S0907444911007888
Structure of HLA-A*0301 in complex with a peptide of proteolipid protein: insights into the role of HLA-A alleles in susceptibility to multiple sclerosis
Cited by: 27
Author(s): Róisín M. McMahon, Lone Smidstrup Friis, Christian Siebold, Manuel A. Friese, Lars Fugger, E Y Jones
Software Mentions: 2
Published: over 14 years ago
10.1038/s41598-017-01989-6
Structural studies of the periplasmic portion of the diguanylate cyclase CdgH from Vibrio cholerae
Cited by: 8
Author(s): Min Xu, Yizhi Wang, Xiu‐An Yang, Tao Jiang, Wei Xie
Software Mentions: 2
Published: about 8 years ago
10.1038/s41598-017-02805-x
A nucleotide-controlled conformational switch modulates the activity of eukaryotic IMP dehydrogenases
Cited by: 32
Author(s): Rubén M. Buey, David Fernández‐Justel, Íñigo Marcos‐Alcalde, Graeme Winter, Paulino Gómez‐Puertas, José M. de Pereda, José Luis Revuelta
Software Mentions: 2
Published: about 8 years ago
10.3390/v7122946
Structure of the Receptor-Binding Carboxy-Terminal Domain of the Bacteriophage T5 L-Shaped Tail Fibre with and without Its Intra-Molecular Chaperone
Cited by: 43
Author(s): Carmela Garcia-Doval, José R. Castón, Daniel Luque, Meritxell Granell, José M. Otero, Antonio L. Llamas‐Saiz, Madalena Renouard, P. Boulanger, Mark J. van Raaij
Software Mentions: 2
Published: over 9 years ago
10.1107/S2053230X18000250
Structure of a <i>Talaromyces pinophilus</i> GH62 arabinofuranosidase in complex with AraDNJ at 1.25 Å resolution
Cited by: 4
Author(s): Olga V. Moroz, L.F. Sobala, E.V. Blagova, Travis Coyle, Wei Peng, Kristian B. R. M. Krogh, Keith A. Stubbs, K.S. Wilson, G.J. Davies
Software Mentions: 2
Published: about 7 years ago
10.3390/v9110321
Atomic Resolution Structure of the Oncolytic Parvovirus LuIII by Electron Microscopy and 3D Image Reconstruction
Cited by: 6
Author(s): Nikéa Pittman, Adam Misseldine, Lorena Geilen, Sujata Halder, J. W. G. Smith, Justin Kurian, Paul R. Chipman, Mandy E.W. Janssen, Robert McKenna, Timothy S. Baker, Anthony D’Abramo, Susan F. Cotmore, Peter Tattersall, Mavis Agbandje‐McKenna
Software Mentions: 2
Published: almost 8 years ago
10.1107/S2053230X17006021
Crystal structures of human Fabs targeting the Bexsero meningococcal vaccine antigen NHBA
Cited by: 4
Author(s): Martina Maritan, Roberta Cozzi, Paola Lo Surdo, Daniele Veggi, Matthew J. Bottomley, E. Malito
Software Mentions: 2
Published: about 8 years ago
10.1038/s41598-017-05234-y
Structural and Biochemical Characterization of Apicomplexan Inorganic Pyrophosphatases
Cited by: 2
Author(s): Abhishek Jamwal, Manickam Yogavel, M. Z. Abdin, Swatantra Kumar Jain, Amit Sharma
Software Mentions: 2
Published: about 8 years ago
10.1016/j.ejmech.2018.04.035
Aminobenzothiazole derivatives stabilize the thermolabile p53 cancer mutant Y220C and show anticancer activity in p53-Y220C cell lines
Cited by: 52
Author(s): Matthias G. J. Baud, Matthias R. Bauer, Lorena Verduci, Felix A. Dingler, Ketan Patel, Debmalya Roy, A.C. Joerger, Alan R. Fersht
Software Mentions: 2
Published: over 7 years ago
10.1107/S0907444912017453
Significant reduction in errors associated with nonbonded contacts in protein crystal structures: automated all-atom refinement with<i>PrimeX</i>
Cited by: 19
Author(s): Jeffrey A. Bell, Kenneth L. Ho, Ramy Farid
Software Mentions: 2
Published: about 13 years ago
10.1038/s41598-017-08834-w
Structural analysis of Wss1 protein from saccharomyces cerevisiae
Cited by: 9
Author(s): Xiaoyun Yang, Yanhua Li, Zengqiang Gao, Zongqiang Li, Jianhua Xu, Wenjia Wang, Yuhui Dong
Software Mentions: 2
Published: almost 8 years ago
10.3389/fcimb.2017.00411
Structure-Based Prototype Peptides Targeting the Pseudomonas aeruginosa Type VI Secretion System Effector as a Novel Antibacterial Strategy
Cited by: 14
Author(s): Xiaopan Gao, Zhixia Mu, Bo Qin, Yicheng Sun, Sheng Cui
Software Mentions: 2
Published: almost 8 years ago
10.1074/jbc.M117.797811
Discovery of a microbial transglutaminase enabling highly site-specific labeling of proteins
Cited by: 42
Author(s): Wojtek Steffen, Fu Chong Ko, Jigar Patel, Victor I. Lyamichev, Thomas Albert, Jörg Benz, M.G. Rudolph, Frank Bergmann, Thomas Streidl, Peter Kratzsch, Mara Boenitz-Dulat, Tobias Oelschlaegel, Michael Schraeml
Software Mentions: 2
Published: almost 8 years ago
10.1107/S1399004714019725
Structural characterization of the virulence factor nuclease A from<i>Streptococcus agalactiae</i>
Cited by: 7
Author(s): A.F. Moon, Philippe Gaudu, Lars C. Pedersen
Software Mentions: 2
Published: almost 11 years ago
10.3390/v12121346
Structural Basis of Zika Virus Specific Neutralization in Subsequent Flavivirus Infections
Cited by: 7
Author(s): Madhumati Sevvana, Thomas F. Rogers, Andrew Miller, Feng Long, Thomas Klose, Nathan Beutler, Yu-Cheng Lai, Mara Parren, Laura M. Walker, Geeta Buda, Dennis R. Burton, Michael G. Rossmann, Richard Kühn
Software Mentions: 2
Published: over 4 years ago
10.1107/S2053230X19006472
Structure of the Prx6-subfamily 1-Cys peroxiredoxin from <i>Sulfolobus islandicus</i>
Cited by: 5
Author(s): Sander Stroobants, Inge Van Molle, Queen Saidi, Karl Jonckheere, Dominique Maes, Eveline Peeters
Software Mentions: 2
Published: about 6 years ago
10.1186/s12915-019-0698-5
Crystal structure of diamondback moth ryanodine receptor Repeat34 domain reveals insect-specific phosphorylation sites
Cited by: 18
Author(s): Tong Xu, Zhiguang Yuchi
Software Mentions: 2
Published: almost 6 years ago
10.3390/v13061101
The Molecular Basis for Escherichia coli O157:H7 Phage FAHEc1 Endolysin Function and Protein Engineering to Increase Thermal Stability
Cited by: 7
Author(s): Michael J. Love, David Coombes, Sarah H. Manners, Gayan S. Abeysekera, Craig Billington, Renwick C. J. Dobson
Software Mentions: 2
Published: about 4 years ago
10.3390/v13071374
Structural Investigation of Orf Virus Bcl-2 Homolog ORFV125 Interactions with BH3-Motifs from BH3-Only Proteins Puma and Hrk
Cited by: 3
Author(s): Chathura D. Suraweera, Mark G. Hinds, Marc Kvansakul
Software Mentions: 2
Published: about 4 years ago
10.3390/v13081495
Crystal Structure of a Retroviral Polyprotein: Prototype Foamy Virus Protease-Reverse Transcriptase (PR-RT)
Cited by: 3
Author(s): Jerry Joe Ebow Kingsley Harrison, Steve Tuske, Kalyan Kumar Das, Francesc Xavier Ruiz, J.D. Bauman, Paul L. Boyer, Jeffrey J. DeStefano, Stephen H. Hughes, Eddy Arnold
Software Mentions: 2
Published: about 4 years ago
10.20411/pai.v4i2.338
Crystal Structure and Immunogenicity of the DS-Cav1-Stabilized Fusion Glycoprotein From Respiratory Syncytial Virus Subtype B
Cited by: 24
Author(s): Michael Joyce, Amy Bao, Man Chen, Ivelin S. Georgiev, Li Ou, Tatsiana Bylund, Aliaksandr Druz, Wing-Pui Kong, Dongjun Peng, E.J. Rundlet, Joseph G. Van Galen, Shuishu Wang, Yongping Yang, Baoshan Zhang, Gwo-Yu Chuang, Jason S. McLellan, Barney S. Graham, John R. Mascola, Peter D. Kwong
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-018-19192-6
The crystal structure of D-xylonate dehydratase reveals functional features of enzymes from the Ilv/ED dehydratase family
Cited by: 19
Author(s): Mohammad Mubinur Rahman, Martina Andberg, Anu Koivula, Juha Rouvinen, Nina Hakulinen
Software Mentions: 2
Published: over 7 years ago
10.1107/S2059798316000401
An overview of heavy-atom derivatization of protein crystals
Cited by: 40
Author(s): A.C.W. Pike, Elspeth F. Garman, T. Krojer, Frank von Delft, E.P. Carpenter
Software Mentions: 2
Published: over 9 years ago
10.1107/S2053230X15015939
An active site–tail interaction in the structure of hexahistidine-tagged Thermoplasma acidophilum citrate synthase
Cited by: 7
Author(s): Jesse Murphy, Stefano Donini, T.J. Kappock
Software Mentions: 2
Published: almost 10 years ago
10.1016/j.csbj.2015.08.005
Integrative Modeling of Macromolecular Assemblies from Low to Near-Atomic Resolution
Cited by: 22
Author(s): Xiaojun Xu, Yan Cheng, Robert M. Wohlhueter, Ivaylo Ivanov
Software Mentions: 2
Published: over 10 years ago
10.1038/s42003-018-0123-6
In situ serial crystallography for rapid de novo membrane protein structure determination
Cited by: 26
Author(s): Chia-Ying Huang, V. Oliéric, Nicole Howe, Rangana Warshamanage, T. Weinert, Ezequiel Panepucci, Lutz Vogeley, Shibom Basu, Kay Diederichs, Martin Caffrey, Meitian Wang
Software Mentions: 2
Published: almost 7 years ago
10.1186/s12915-015-0167-8
Role of electrostatic interactions for ligand recognition and specificity of peptide transporters
Cited by: 47
Author(s): Rajendra Boggavarapu, Jean-Marc Jeckelmann, Daniel Harder, Zöhre Ucurum, Dimitrios Fotiadis
Software Mentions: 2
Published: almost 10 years ago
10.1038/s41598-018-22300-1
Structural and functional studies on Pseudomonas aeruginosa DspI: implications for its role in DSF biosynthesis
Cited by: 20
Author(s): Li Liu, Tao Li, Xiao Cheng, Peng Cheng, Changcheng Li, Libang He, Si-Min Ju, Ningyu Wang, Tinghong Ye, Mao Lian, Qing-Jie Xiao, Yingjie Song, Yuanfeng Zhu, Luoting Yu, Zhen-Ling Wang, Rui Bao
Software Mentions: 2
Published: over 7 years ago
10.1016/j.csbj.2021.06.006
A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis
Cited by: 13
Author(s): P. Gupta, S.E. Thomas, Shaymaa A. Zaidan, Maria A. Pasillas, J. Cory-Wright, Víctor Sebastián-Pérez, Ailidh Burgess, Emma Cattermole, C. Meghir, Chris Abell, Anthony G. Coyne, William R. Jacobs, Tom L. Blundell, Sangeeta Tiwari, V. Mendes
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-018-23821-5
Structural basis of interaction between dimeric cyclophilin 1 and Myb1 transcription factor in Trichomonas vaginalis
Cited by: 3
Author(s): Tesmine Martin, Yuan‐Chao Lou, Chun Chou, Shu‐Yi Wei, Sushant Sadotra, Chao-Cheng Cho, Meng-Hsuan Lin, Jung-Hsiang Tai, Chun‐Hua Hsu, Chinpan Chen
Software Mentions: 2
Published: over 7 years ago
10.1107/S2053230X15003337
High-resolution crystal structure of a polyextreme GH43 glycosidase from<i>Halothermothrix orenii</i>with α-<scp>L</scp>-arabinofuranosidase activity
Cited by: 7
Author(s): Noor Hassan, Lokesh D. Kori, Rosaria Gandini, Bharat K. C. Patel, Christina Divne, T.C. Tan
Software Mentions: 2
Published: over 10 years ago
10.1007/s11120-017-0450-3
Crystal structure of Psb27 from Arabidopsis thaliana determined at a resolution of 1.85 Å
Cited by: 7
Author(s): Xingxing Cheng, Jiuyang Liu, Huan Zhang, Fudong Li, Zhang Shuya, Min Xu, Ke Ruan, Yuhua Wang, Aigen Fu
Software Mentions: 2
Published: over 7 years ago
10.1016/j.csbj.2021.05.035
Altered APE1 activity on abasic ribonucleotides is mediated by changes in the nucleoside sugar pucker
Cited by: 6
Author(s): N.M. Hoitsma, Timothy H. Click, Pratul K. Agarwal, Bret Freudenthal
Software Mentions: 2
Published: over 4 years ago
10.1186/s12859-014-0434-7
Structure and sequence analyses of Bacteroides proteins BVU_4064 and BF1687 reveal presence of two novel predominantly-beta domains, predicted to be involved in lipid and cell surface interactions
Cited by: 3
Author(s): Padmaja Natarajan, Marco Punta, Abhinav Kumar, Andrew Yeh, Adam Godzik, L. Aravind
Software Mentions: 2
Published: over 10 years ago
10.1038/s42003-020-01531-x
Structural insights into photoactivation of plant Cryptochrome-2
Cited by: 27
Author(s): Malathy Palayam, Jagadeesan Ganapathy, Angelica M. Guercio, Lior Tal, Samuel L. Deck, Nitzan Shabek
Software Mentions: 2
Published: over 4 years ago